0.012009 0.006933 0.000000 0.000000 0.013867 0.000000 0.000000 0.000000 0.030488 0.00000 0.00000 0.00000 Xu, S. Gu, L. Zhou, Y. Lin, Z. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 83.270 83.270 32.800 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C4 H10 O2 90.121 1,4-BUTANEDIOL non-polymer Cd 2 112.411 CADMIUM ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N C N 75 N C N 76 N C N 77 N C N 78 N O N 79 N O N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N CD N 91 N N N 92 R C N 93 N C N 94 N O N 95 N C N 96 N S N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N N N 106 S C N 107 N C N 108 N O N 109 N C N 110 N C N 111 N C N 112 N O N 113 N N N 114 N O N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N N N 126 S C N 127 N C N 128 N O N 129 N C N 130 N C N 131 N C N 132 N O N 133 N O N 134 N O N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N N N 145 N C N 146 N C N 147 N O N 148 N O N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N N N 155 S C N 156 N C N 157 N O N 158 N C Y 159 N C Y 160 N N Y 161 N C Y 162 N C Y 163 N N N 164 N O N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N O N 176 N H N 177 N H N 178 N N N 179 S C N 180 N C N 181 N O N 182 S C N 183 N C N 184 N C N 185 N C N 186 N O N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N N N 201 S C N 202 N C N 203 N O N 204 N C N 205 N C N 206 N C N 207 N C N 208 N O N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N N N 223 S C N 224 N C N 225 N O N 226 N C N 227 N C N 228 N C N 229 N C N 230 N N N 231 N O N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N N N 248 S C N 249 N C N 250 N O N 251 N C N 252 N C N 253 N S N 254 N C N 255 N O N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N N N 268 S C N 269 N C N 270 N O N 271 N C Y 272 N C Y 273 N C Y 274 N C Y 275 N C Y 276 N C Y 277 N C N 278 N O N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N C N 296 N C N 297 N O N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N N N 308 S C N 309 N C N 310 N O N 311 N C N 312 N O N 313 N O N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 R C N 326 N O N 327 N C N 328 N O N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N N N 339 S C N 340 N C N 341 N O N 342 N C Y 343 N C Y 344 N C Y 345 N C Y 346 N N Y 347 N C Y 348 N C Y 349 N C Y 350 N C Y 351 N C N 352 N O N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N N N 366 S C N 367 N C N 368 N O N 369 N C Y 370 N C Y 371 N C Y 372 N C Y 373 N C Y 374 N C Y 375 N C N 376 N O N 377 N O N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N N N 390 S C N 391 N C N 392 N O N 393 N C N 394 N C N 395 N C N 396 N O N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N doub N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N doub N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N doub N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N doub N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N doub N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N doub N 151 N sing N 152 N sing N 153 N sing N 154 N sing Y 155 N sing Y 156 N doub Y 157 N doub N 158 N sing Y 159 N sing N 160 N sing Y 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N doub N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N doub N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N doub N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N doub N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N doub N 259 N sing N 260 N sing N 261 N sing N 262 N sing Y 263 N doub Y 264 N sing Y 265 N sing N 266 N sing Y 267 N doub N 268 N sing Y 269 N doub N 270 N sing Y 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N doub N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N doub N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N doub N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N doub N 328 N sing N 329 N sing N 330 N sing N 331 N sing Y 332 N doub Y 333 N sing Y 334 N sing N 335 N sing Y 336 N doub Y 337 N sing Y 338 N sing N 339 N sing Y 340 N sing Y 341 N doub N 342 N sing Y 343 N doub N 344 N sing Y 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N doub N 356 N sing N 357 N sing N 358 N sing N 359 N sing Y 360 N doub Y 361 N sing Y 362 N sing N 363 N sing Y 364 N doub N 365 N sing Y 366 N doub N 367 N sing Y 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N doub N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing US Biochem.Biophys.Res.Commun. BBRCA9 0146 0006-291X 300 271 277 10.1016/S0006-291X(02)02833-4 12504079 Structures of cadmium-binding acidic phospholipase A(2) from the venom of Agkistrodon halys Pallas at 1.9A resolutio 2003 UK J.MOL.BIOL. JMOBAK 0070 0022-2836 255 669 676 10.1006/jmbi.1996.0054 Crystal structure of an acidic phospholipase A2 from the venom of Agkistrodon halys pallas at 2.0 A resolution 1996 UK TOXICON TOXIA6 2043 0041-0101 36 875 886 10.1016/S0041-0101(97)00169-4 Structure of a snake venom phospholipase A2 modified by p-bromo-phenacyl-bromide 1998 10.2210/pdb1m8r/pdb pdb_00001m8r 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 293 1 1 AREA DETECTOR 2001-06-14 MARRESEARCH graphite SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU 13956.688 phospholipase A2 3.1.1.4 1 nat polymer 112.411 CADMIUM ION 1 syn non-polymer 90.121 1,4-BUTANEDIOL 2 syn non-polymer 18.015 water 81 nat water no no SLVQFETLIMKVAKKSGMQWYSNYGCYCGWGGQGRPQDATDRCCFVHDCCYGKVTGCDPKMDVYSFSEENGDIVCGGDDP CKKEICECDRAAAICFRDNLNTYNDKKYWAFGAKNCPQEESEPC SLVQFETLIMKVAKKSGMQWYSNYGCYCGWGGQGRPQDATDRCCFVHDCCYGKVTGCDPKMDVYSFSEENGDIVCGGDDP CKKEICECDRAAAICFRDNLNTYNDKKYWAFGAKNCPQEESEPC A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n halys viper Gloydius sample 8714 Gloydius halys venom 1 2.35 47.69 VAPOR DIFFUSION, HANGING DROP 7.4 10%(v/v) 1,4-butyldiol, 0.01M CdCl2, 0.1M Na(CH3)2AsO, pH 7.4, VAPOR DIFFUSION, HANGING DROP, temperature 293K 293 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations Refinement description 1 0 2003-02-11 1 1 2008-04-28 1 2 2011-07-13 1 3 2023-10-25 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id 1PSJ contains the same protein at 2.01 Resolution 1BK9 contains the same protein Modified By Pbpb 1M8S contains the same protein, crystal grown at pH 5.9 RCSB Y PDBJ 2002-07-25 REL REL CD CADMIUM ION BU1 1,4-BUTANEDIOL HOH water 1PSJ PDB ENTRY 1PSJ PDB experimental model CD 1001 2 CD CD 1001 A BU1 1001 3 BU1 BU1 1002 A BU1 1002 3 BU1 BU1 1003 A HOH 1 4 HOH HOH 1004 A HOH 2 4 HOH HOH 1005 A HOH 3 4 HOH HOH 1006 A HOH 4 4 HOH HOH 1007 A HOH 5 4 HOH HOH 1008 A HOH 6 4 HOH HOH 1009 A HOH 7 4 HOH HOH 1010 A HOH 8 4 HOH HOH 1011 A HOH 9 4 HOH HOH 1012 A HOH 10 4 HOH HOH 1013 A HOH 11 4 HOH HOH 1014 A HOH 12 4 HOH HOH 1015 A HOH 13 4 HOH HOH 1016 A HOH 14 4 HOH HOH 1017 A HOH 15 4 HOH HOH 1018 A HOH 16 4 HOH HOH 1019 A HOH 17 4 HOH HOH 1020 A HOH 18 4 HOH HOH 1021 A HOH 19 4 HOH HOH 1022 A HOH 20 4 HOH HOH 1023 A HOH 21 4 HOH HOH 1024 A HOH 22 4 HOH HOH 1025 A HOH 23 4 HOH HOH 1026 A HOH 24 4 HOH HOH 1027 A HOH 25 4 HOH HOH 1028 A HOH 26 4 HOH HOH 1029 A HOH 27 4 HOH HOH 1030 A HOH 28 4 HOH HOH 1031 A HOH 29 4 HOH HOH 1032 A HOH 30 4 HOH HOH 1033 A HOH 31 4 HOH HOH 1034 A HOH 32 4 HOH HOH 1035 A HOH 33 4 HOH HOH 1036 A HOH 34 4 HOH HOH 1037 A HOH 35 4 HOH HOH 1038 A HOH 36 4 HOH HOH 1039 A HOH 37 4 HOH HOH 1040 A HOH 38 4 HOH HOH 1041 A HOH 39 4 HOH HOH 1042 A HOH 40 4 HOH HOH 1043 A HOH 41 4 HOH HOH 1044 A HOH 42 4 HOH HOH 1045 A HOH 43 4 HOH HOH 1046 A HOH 44 4 HOH HOH 1047 A HOH 45 4 HOH HOH 1048 A HOH 46 4 HOH HOH 1049 A HOH 47 4 HOH HOH 1050 A HOH 48 4 HOH HOH 1051 A HOH 49 4 HOH HOH 1052 A HOH 50 4 HOH HOH 1053 A HOH 51 4 HOH HOH 1054 A HOH 52 4 HOH HOH 1055 A HOH 53 4 HOH HOH 1056 A HOH 54 4 HOH HOH 1057 A HOH 55 4 HOH HOH 1058 A HOH 56 4 HOH HOH 1059 A HOH 57 4 HOH HOH 1060 A HOH 58 4 HOH HOH 1061 A HOH 59 4 HOH HOH 1062 A HOH 60 4 HOH HOH 1063 A HOH 61 4 HOH HOH 1064 A HOH 62 4 HOH HOH 1065 A HOH 63 4 HOH HOH 1066 A HOH 64 4 HOH HOH 1067 A HOH 65 4 HOH HOH 1068 A HOH 66 4 HOH HOH 1069 A HOH 67 4 HOH HOH 1070 A HOH 68 4 HOH HOH 1071 A HOH 69 4 HOH HOH 1072 A HOH 70 4 HOH HOH 1073 A HOH 71 4 HOH HOH 1074 A HOH 72 4 HOH HOH 1075 A HOH 73 4 HOH HOH 1076 A HOH 74 4 HOH HOH 1077 A HOH 75 4 HOH HOH 1078 A HOH 76 4 HOH HOH 1079 A HOH 77 4 HOH HOH 1080 A HOH 78 4 HOH HOH 1081 A HOH 79 4 HOH HOH 1082 A HOH 80 4 HOH HOH 1083 A HOH 81 4 HOH HOH 1084 A SER 1 n 1 SER 1 A LEU 2 n 2 LEU 2 A VAL 3 n 3 VAL 3 A GLN 4 n 4 GLN 4 A PHE 5 n 5 PHE 5 A GLU 6 n 6 GLU 6 A THR 7 n 7 THR 7 A LEU 8 n 8 LEU 8 A ILE 9 n 9 ILE 9 A MET 10 n 10 MET 10 A LYS 11 n 11 LYS 11 A VAL 12 n 12 VAL 12 A ALA 13 n 13 ALA 13 A LYS 14 n 14 LYS 14 A LYS 16 n 15 LYS 16 A SER 17 n 16 SER 17 A GLY 18 n 17 GLY 18 A MET 19 n 18 MET 19 A GLN 20 n 19 GLN 20 A TRP 21 n 20 TRP 21 A TYR 22 n 21 TYR 22 A SER 23 n 22 SER 23 A ASN 24 n 23 ASN 24 A TYR 25 n 24 TYR 25 A GLY 26 n 25 GLY 26 A CYS 27 n 26 CYS 27 A TYR 28 n 27 TYR 28 A CYS 29 n 28 CYS 29 A GLY 30 n 29 GLY 30 A TRP 31 n 30 TRP 31 A GLY 32 n 31 GLY 32 A GLY 33 n 32 GLY 33 A GLN 34 n 33 GLN 34 A GLY 35 n 34 GLY 35 A ARG 36 n 35 ARG 36 A PRO 37 n 36 PRO 37 A GLN 38 n 37 GLN 38 A ASP 39 n 38 ASP 39 A ALA 40 n 39 ALA 40 A THR 41 n 40 THR 41 A ASP 42 n 41 ASP 42 A ARG 43 n 42 ARG 43 A CYS 44 n 43 CYS 44 A CYS 45 n 44 CYS 45 A PHE 46 n 45 PHE 46 A VAL 47 n 46 VAL 47 A HIS 48 n 47 HIS 48 A ASP 49 n 48 ASP 49 A CYS 50 n 49 CYS 50 A CYS 51 n 50 CYS 51 A TYR 52 n 51 TYR 52 A GLY 53 n 52 GLY 53 A LYS 54 n 53 LYS 54 A VAL 55 n 54 VAL 55 A THR 56 n 55 THR 56 A GLY 59 n 56 GLY 59 A CYS 61 n 57 CYS 61 A ASP 67 n 58 ASP 67 A PRO 68 n 59 PRO 68 A LYS 69 n 60 LYS 69 A MET 70 n 61 MET 70 A ASP 71 n 62 ASP 71 A VAL 72 n 63 VAL 72 A TYR 73 n 64 TYR 73 A SER 74 n 65 SER 74 A PHE 75 n 66 PHE 75 A SER 76 n 67 SER 76 A GLU 77 n 68 GLU 77 A GLU 78 n 69 GLU 78 A ASN 79 n 70 ASN 79 A GLY 80 n 71 GLY 80 A ASP 81 n 72 ASP 81 A ILE 82 n 73 ILE 82 A VAL 83 n 74 VAL 83 A CYS 84 n 75 CYS 84 A GLY 85 n 76 GLY 85 A GLY 86 n 77 GLY 86 A ASP 88 n 78 ASP 88 A ASP 89 n 79 ASP 89 A PRO 90 n 80 PRO 90 A CYS 91 n 81 CYS 91 A LYS 92 n 82 LYS 92 A LYS 93 n 83 LYS 93 A GLU 94 n 84 GLU 94 A ILE 95 n 85 ILE 95 A CYS 96 n 86 CYS 96 A GLU 97 n 87 GLU 97 A CYS 98 n 88 CYS 98 A ASP 99 n 89 ASP 99 A ARG 100 n 90 ARG 100 A ALA 101 n 91 ALA 101 A ALA 102 n 92 ALA 102 A ALA 103 n 93 ALA 103 A ILE 104 n 94 ILE 104 A CYS 105 n 95 CYS 105 A PHE 106 n 96 PHE 106 A ARG 107 n 97 ARG 107 A ASP 108 n 98 ASP 108 A ASN 109 n 99 ASN 109 A LEU 110 n 100 LEU 110 A ASN 111 n 101 ASN 111 A THR 112 n 102 THR 112 A TYR 113 n 103 TYR 113 A ASN 114 n 104 ASN 114 A ASP 115 n 105 ASP 115 A LYS 116 n 106 LYS 116 A LYS 117 n 107 LYS 117 A TYR 118 n 108 TYR 118 A TRP 119 n 109 TRP 119 A ALA 120 n 110 ALA 120 A PHE 121 n 111 PHE 121 A GLY 122 n 112 GLY 122 A ALA 123 n 113 ALA 123 A LYS 124 n 114 LYS 124 A ASN 125 n 115 ASN 125 A CYS 126 n 116 CYS 126 A PRO 127 n 117 PRO 127 A GLN 128 n 118 GLN 128 A GLU 129 n 119 GLU 129 A GLU 130 n 120 GLU 130 A SER 131 n 121 SER 131 A GLU 132 n 122 GLU 132 A PRO 133 n 123 PRO 133 A CYS 134 n 124 CYS 134 A author_defined_assembly 1 monomeric A TYR 28 A O TYR 27 1_555 A CD 1001 B CD CD 1_555 A GLY 30 A O GLY 29 1_555 87.9 A TYR 28 A O TYR 27 1_555 A CD 1001 B CD CD 1_555 A GLY 32 A O GLY 31 1_555 101.2 A GLY 30 A O GLY 29 1_555 A CD 1001 B CD CD 1_555 A GLY 32 A O GLY 31 1_555 90.4 A TYR 28 A O TYR 27 1_555 A CD 1001 B CD CD 1_555 A ASP 49 A OD1 ASP 48 1_555 117.3 A GLY 30 A O GLY 29 1_555 A CD 1001 B CD CD 1_555 A ASP 49 A OD1 ASP 48 1_555 120.6 A GLY 32 A O GLY 31 1_555 A CD 1001 B CD CD 1_555 A ASP 49 A OD1 ASP 48 1_555 129.6 A TYR 28 A O TYR 27 1_555 A CD 1001 B CD CD 1_555 A ASP 49 A OD2 ASP 48 1_555 110.7 A GLY 30 A O GLY 29 1_555 A CD 1001 B CD CD 1_555 A ASP 49 A OD2 ASP 48 1_555 160.5 A GLY 32 A O GLY 31 1_555 A CD 1001 B CD CD 1_555 A ASP 49 A OD2 ASP 48 1_555 91.8 A ASP 49 A OD1 ASP 48 1_555 A CD 1001 B CD CD 1_555 A ASP 49 A OD2 ASP 48 1_555 46.0 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O GLU 78 A O GLU 69 A N ASP 81 A N ASP 72 1 A CG LYS 54 A CG LYS 53 1 Y 1 A CD LYS 54 A CD LYS 53 1 Y 1 A CE LYS 54 A CE LYS 53 1 Y 1 A NZ LYS 54 A NZ LYS 53 1 Y 1 A CG GLU 78 A CG GLU 69 1 Y 1 A CD GLU 78 A CD GLU 69 1 Y 1 A OE1 GLU 78 A OE1 GLU 69 1 Y 1 A OE2 GLU 78 A OE2 GLU 69 1 Y 1 A CB LYS 124 A CB LYS 114 1 Y 1 A CG LYS 124 A CG LYS 114 1 Y 1 A CD LYS 124 A CD LYS 114 1 Y 1 A CE LYS 124 A CE LYS 114 1 Y 1 A NZ LYS 124 A NZ LYS 114 1 Y 1 A ASN 24 -156.70 55.91 PROTEIN_REP.PARAM PROTEIN.TOP ION.PARAM ION.TOP WATER.PARAM WATER.TOP BBO.PARAM BBO.TOP 25.7 0.89 0.81 0.00 0.89 0.00 -1.78 0.21 0.006 0.193 0.193 0.193 1.90 25.00 1078 10434 10.3 99.9 RANDOM 2 RESTRAINED THROUGHOUT 0.0 isomorphous difference Fourier PDB ENTRY 1PSJ FLAT MODEL 91.6329 0.401006 0.20 0.06 1.90 25.00 81 1048 13 0 954 0.007 1.3 22.6 0.83 1.59 1.50 2.55 2.00 3.16 2.00 5.08 2.50 0.242 0.015 0.214 2.02 198 1504 6 11.6 100.0 20.4 1.9 25 1M8R 10450 10450 0.0001 0.068 2 26.2 7.7 99.9 0.369 1.90 1.97 5.7 1016 6.9 100 data reduction DENZO data scaling SCALEPACK refinement CNS phasing CNS Crystal Structures of Cadmium-binding Acidic Phospholipase A2 from the Venom of Agkistrodon halys pallas at 1.9 Resolution (crystal grown at pH 7.4) 1 N N 2 N N 3 N N 3 N N 4 N N A SER 1 A SER 1 HELX_P A ALA 13 A ALA 13 1 1 13 A SER 17 A SER 16 HELX_P A TYR 22 A TYR 21 1 2 6 A ASP 89 A ASP 79 HELX_P A ASN 109 A ASN 99 1 4 21 A LEU 110 A LEU 100 HELX_P A TYR 113 A TYR 103 5 5 4 A ASN 114 A ASN 104 HELX_P A TRP 119 A TRP 109 1 6 6 A PRO 127 A PRO 117 HELX_P A SER 131 A SER 121 5 7 5 disulf 2.034 A CYS 27 A SG CYS 26 1_555 A CYS 126 A SG CYS 116 1_555 disulf 2.029 A CYS 29 A SG CYS 28 1_555 A CYS 45 A SG CYS 44 1_555 disulf 2.041 A CYS 44 A SG CYS 43 1_555 A CYS 105 A SG CYS 95 1_555 disulf 2.034 A CYS 50 A SG CYS 49 1_555 A CYS 134 A SG CYS 124 1_555 disulf 2.028 A CYS 51 A SG CYS 50 1_555 A CYS 98 A SG CYS 88 1_555 disulf 2.036 A CYS 61 A SG CYS 57 1_555 A CYS 91 A SG CYS 81 1_555 disulf 2.032 A CYS 84 A SG CYS 75 1_555 A CYS 96 A SG CYS 86 1_555 metalc 2.265 A TYR 28 A O TYR 27 1_555 A CD 1001 B CD CD 1_555 metalc 2.223 A GLY 30 A O GLY 29 1_555 A CD 1001 B CD CD 1_555 metalc 2.305 A GLY 32 A O GLY 31 1_555 A CD 1001 B CD CD 1_555 metalc 3.031 A ASP 49 A OD1 ASP 48 1_555 A CD 1001 B CD CD 1_555 metalc 2.272 A ASP 49 A OD2 ASP 48 1_555 A CD 1001 B CD CD 1_555 HYDROLASE phopholipase a2-metal cation complex, three alpha, two beta, Hydrolase PA21B_AGKHP UNP 1 1 P14418 SLIQFETLIMKVAKKSGMFWYSNYGCYCGWGGQGRPQDATDRCCFVHDCCYGKVTGCDPKMDVYSFSEENGDIVCGGDDP CKKEICECDRAAAICFRDNLTLYNDKKYWAFGAKNCPQEESEPC 1 124 1M8R 1 134 P14418 A 1 1 124 1 ILE SEE REMARK 999 VAL 3 1M8R A P14418 UNP 3 3 1 PHE SEE REMARK 999 GLN 20 1M8R A P14418 UNP 19 19 1 THR SEE REMARK 999 ASN 111 1M8R A P14418 UNP 101 101 1 LEU SEE REMARK 999 THR 112 1M8R A P14418 UNP 102 102 2 anti-parallel A SER 74 A SER 65 A GLU 78 A GLU 69 A ASP 81 A ASP 72 A GLY 85 A GLY 76 BINDING SITE FOR RESIDUE CD A 1001 A CD 1001 Software 4 BINDING SITE FOR RESIDUE BU1 A 1002 A BU1 1002 Software 4 BINDING SITE FOR RESIDUE BU1 A 1003 A BU1 1003 Software 7 A TYR 28 A TYR 27 4 1_555 A GLY 30 A GLY 29 4 1_555 A GLY 32 A GLY 31 4 1_555 A ASP 49 A ASP 48 4 1_555 A GLU 6 A GLU 6 4 1_555 A MET 19 A MET 18 4 1_555 A TYR 22 A TYR 21 4 1_555 A CYS 45 A CYS 44 4 1_555 A MET 19 A MET 18 7 1_555 A GLN 20 A GLN 19 7 1_555 A SER 23 A SER 22 7 1_555 A PRO 37 A PRO 36 7 5_564 A ALA 40 A ALA 39 7 5_564 A ARG 43 A ARG 42 7 5_564 A HOH 1007 E HOH 7 5_564 169 P 61