0.008933
0.000000
0.003547
0.000000
0.018103
0.000000
0.000000
0.000000
0.020876
0.00000
0.00000
0.00000
Sanli, G.
Blaber, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
111.66
90.00
111.950
55.240
51.540
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C21 H27 N7 O14 P2
663.425
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
N
C
Y
128
N
C
Y
129
N
N
Y
130
N
C
Y
131
N
C
Y
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
S
C
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
S
C
N
171
N
C
N
172
N
O
N
173
N
C
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
O
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
N
N
192
S
C
N
193
N
C
N
194
N
O
N
195
N
C
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
N
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
N
N
217
S
C
N
218
N
C
N
219
N
O
N
220
N
C
N
221
N
C
N
222
N
S
N
223
N
C
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
S
P
N
237
N
O
N
238
N
O
N
239
N
O
N
240
N
C
N
241
R
C
N
242
N
O
N
243
S
C
N
244
N
O
N
245
R
C
N
246
N
O
N
247
R
C
Y
248
N
N
Y
249
N
C
Y
250
N
N
Y
251
N
C
Y
252
N
C
N
253
N
N
Y
254
N
N
Y
255
N
C
Y
256
N
N
Y
257
N
C
N
258
N
O
N
259
N
P
N
260
N
O
N
261
N
O
N
262
N
O
N
263
N
C
N
264
R
C
N
265
N
O
N
266
S
C
N
267
N
O
N
268
R
C
N
269
N
O
N
270
R
C
Y
271
N
N
Y
272
N
C
Y
273
N
C
N
274
N
C
N
275
N
O
N
276
N
N
Y
277
N
C
Y
278
N
C
Y
279
N
C
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
N
N
308
S
C
N
309
N
C
N
310
N
O
N
311
N
C
Y
312
N
C
Y
313
N
C
Y
314
N
C
Y
315
N
C
Y
316
N
C
Y
317
N
C
N
318
N
O
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
N
N
331
S
C
N
332
N
C
N
333
N
O
N
334
N
C
N
335
N
C
N
336
N
C
N
337
N
O
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
N
N
348
S
C
N
349
N
C
N
350
N
O
N
351
N
C
N
352
N
O
N
353
N
O
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
S
N
362
N
O
N
363
N
O
N
364
N
O
N
365
N
O
N
366
N
N
N
367
S
C
N
368
N
C
N
369
N
O
N
370
R
C
N
371
N
O
N
372
N
C
N
373
N
O
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
N
N
384
S
C
N
385
N
C
N
386
N
O
N
387
N
C
Y
388
N
C
Y
389
N
C
Y
390
N
C
Y
391
N
N
Y
392
N
C
Y
393
N
C
Y
394
N
C
Y
395
N
C
Y
396
N
C
N
397
N
O
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
N
N
411
S
C
N
412
N
C
N
413
N
O
N
414
N
C
Y
415
N
C
Y
416
N
C
Y
417
N
C
Y
418
N
C
Y
419
N
C
Y
420
N
C
N
421
N
O
N
422
N
O
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
N
N
435
S
C
N
436
N
C
N
437
N
O
N
438
N
C
N
439
N
C
N
440
N
C
N
441
N
O
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
Y
247
N
sing
Y
248
N
sing
Y
249
N
doub
N
250
N
sing
Y
251
N
sing
Y
252
N
sing
Y
253
N
doub
N
254
N
sing
Y
255
N
doub
N
256
N
sing
N
257
N
sing
Y
258
N
sing
Y
259
N
doub
N
260
N
sing
Y
261
N
sing
N
262
N
sing
N
263
N
doub
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
Y
284
N
sing
Y
285
N
doub
Y
286
N
doub
N
287
N
sing
N
288
N
sing
Y
289
N
sing
N
290
N
doub
N
291
N
sing
N
292
N
sing
N
293
N
sing
Y
294
N
doub
N
295
N
sing
Y
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
doub
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
Y
310
N
doub
Y
311
N
sing
Y
312
N
sing
N
313
N
sing
Y
314
N
doub
N
315
N
sing
Y
316
N
doub
N
317
N
sing
Y
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
doub
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
doub
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
doub
N
353
N
doub
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
doub
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
doub
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
Y
383
N
doub
Y
384
N
sing
Y
385
N
sing
N
386
N
sing
Y
387
N
doub
Y
388
N
sing
Y
389
N
sing
N
390
N
sing
Y
391
N
sing
Y
392
N
doub
N
393
N
sing
Y
394
N
doub
N
395
N
sing
Y
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
doub
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
Y
411
N
doub
Y
412
N
sing
Y
413
N
sing
N
414
N
sing
Y
415
N
doub
N
416
N
sing
Y
417
N
doub
N
418
N
sing
Y
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
doub
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
US
Protein Sci.
PRCIEI
0795
0961-8368
13
504
512
10.1110/ps.03450704
14718658
Structural alteration of cofactor specificity in Corynebacterium 2,5-diketo-D-gluconic acid reductase
2004
10.2210/pdb1m9h/pdb
pdb_00001m9h
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
103
1
103
1
1
Osmic Blue confocal mirrors
IMAGE PLATE
2002-04-04
RIGAKU RAXIS IIC
Osmic Blue confocal mirrors
CCD
2002-04-11
MARRESEARCH
osmic mirrors
SINGLE WAVELENGTH
M
x-ray
1
osmic mirrors
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU
1.5418
ROTATING ANODE
RIGAKU RUH2R
30062.465
2,5-diketo-D-gluconic acid reductase A
1.1.1.-
F22Y, K232G, R238H, A272G
1
man
polymer
96.063
SULFATE ION
1
syn
non-polymer
663.425
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
1
syn
non-polymer
18.015
water
146
nat
water
2,5-DKG reductase A, 2,5-DKGR A, 25DKGR-A, AKR5C
no
no
MTVPSIVLNDGNSIPQLGYGVYKVPPADTQRAVEEALEVGYRHIDTAAIYGNEEGVGAAIAASGIARDDLFITTKLWNDR
HDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAADNYVHAWEKMIELRAAGLTRSIGVSNHLVPHLERIVAATGVVPAVN
QIELHPAYQQREITDWAAAHDVKIESWGPLGQGKYDLFGAEPVTAAAAAHGKTPAQAVLRWHLQKGFVVFPGSVRREHLE
ENLDVFDFDLTDTEIAAIDAMDPGDGSGRVSGHPDEVD
MTVPSIVLNDGNSIPQLGYGVYKVPPADTQRAVEEALEVGYRHIDTAAIYGNEEGVGAAIAASGIARDDLFITTKLWNDR
HDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAADNYVHAWEKMIELRAAGLTRSIGVSNHLVPHLERIVAATGVVPAVN
QIELHPAYQQREITDWAAAHDVKIESWGPLGQGKYDLFGAEPVTAAAAAHGKTPAQAVLRWHLQKGFVVFPGSVRREHLE
ENLDVFDFDLTDTEIAAIDAMDPGDGSGRVSGHPDEVD
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Corynebacterium
Escherichia
sample
1720
Corynebacterium sp.
562
Escherichia coli
plasmid
pET-21a(+)
2
2.46
50.07
VAPOR DIFFUSION, HANGING DROP
7.5
lithium sulfate monohydrate, hepes-sodium, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
database_2
struct_ref_seq_dif
struct_site
chem_comp_atom
chem_comp_bond
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Database references
Derived calculations
Data collection
Refinement description
1
0
2003-08-12
1
1
2008-04-28
1
2
2011-07-13
1
3
2021-10-27
1
4
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Corynebacterium 2,5-DKGR A in presence of NADPH
RCSB
Y
RCSB
2002-07-29
REL
REL
SO4
SULFATE ION
NAD
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
HOH
water
1A80
PDB ENTRY 1A80
PDB
experimental model
SO4
301
2
SO4
SO4
301
A
NAD
300
3
NAD
NAD
300
A
HOH
302
4
HOH
HOH
302
A
HOH
303
4
HOH
HOH
303
A
HOH
304
4
HOH
HOH
304
A
HOH
305
4
HOH
HOH
305
A
HOH
306
4
HOH
HOH
306
A
HOH
307
4
HOH
HOH
307
A
HOH
308
4
HOH
HOH
308
A
HOH
309
4
HOH
HOH
309
A
HOH
310
4
HOH
HOH
310
A
HOH
311
4
HOH
HOH
311
A
HOH
312
4
HOH
HOH
312
A
HOH
313
4
HOH
HOH
313
A
HOH
314
4
HOH
HOH
314
A
HOH
315
4
HOH
HOH
315
A
HOH
316
4
HOH
HOH
316
A
HOH
317
4
HOH
HOH
317
A
HOH
318
4
HOH
HOH
318
A
HOH
319
4
HOH
HOH
319
A
HOH
320
4
HOH
HOH
320
A
HOH
321
4
HOH
HOH
321
A
HOH
322
4
HOH
HOH
322
A
HOH
323
4
HOH
HOH
323
A
HOH
324
4
HOH
HOH
324
A
HOH
325
4
HOH
HOH
325
A
HOH
326
4
HOH
HOH
326
A
HOH
327
4
HOH
HOH
327
A
HOH
328
4
HOH
HOH
328
A
HOH
329
4
HOH
HOH
329
A
HOH
330
4
HOH
HOH
330
A
HOH
331
4
HOH
HOH
331
A
HOH
332
4
HOH
HOH
332
A
HOH
333
4
HOH
HOH
333
A
HOH
334
4
HOH
HOH
334
A
HOH
335
4
HOH
HOH
335
A
HOH
336
4
HOH
HOH
336
A
HOH
337
4
HOH
HOH
337
A
HOH
338
4
HOH
HOH
338
A
HOH
339
4
HOH
HOH
339
A
HOH
340
4
HOH
HOH
340
A
HOH
341
4
HOH
HOH
341
A
HOH
342
4
HOH
HOH
342
A
HOH
343
4
HOH
HOH
343
A
HOH
344
4
HOH
HOH
344
A
HOH
345
4
HOH
HOH
345
A
HOH
346
4
HOH
HOH
346
A
HOH
347
4
HOH
HOH
347
A
HOH
348
4
HOH
HOH
348
A
HOH
349
4
HOH
HOH
349
A
HOH
350
4
HOH
HOH
350
A
HOH
351
4
HOH
HOH
351
A
HOH
352
4
HOH
HOH
352
A
HOH
353
4
HOH
HOH
353
A
HOH
354
4
HOH
HOH
354
A
HOH
355
4
HOH
HOH
355
A
HOH
356
4
HOH
HOH
356
A
HOH
357
4
HOH
HOH
357
A
HOH
358
4
HOH
HOH
358
A
HOH
359
4
HOH
HOH
359
A
HOH
360
4
HOH
HOH
360
A
HOH
361
4
HOH
HOH
361
A
HOH
362
4
HOH
HOH
362
A
HOH
363
4
HOH
HOH
363
A
HOH
364
4
HOH
HOH
364
A
HOH
365
4
HOH
HOH
365
A
HOH
366
4
HOH
HOH
366
A
HOH
367
4
HOH
HOH
367
A
HOH
368
4
HOH
HOH
368
A
HOH
369
4
HOH
HOH
369
A
HOH
370
4
HOH
HOH
370
A
HOH
371
4
HOH
HOH
371
A
HOH
372
4
HOH
HOH
372
A
HOH
373
4
HOH
HOH
373
A
HOH
374
4
HOH
HOH
374
A
HOH
375
4
HOH
HOH
375
A
HOH
376
4
HOH
HOH
376
A
HOH
377
4
HOH
HOH
377
A
HOH
378
4
HOH
HOH
378
A
HOH
379
4
HOH
HOH
379
A
HOH
380
4
HOH
HOH
380
A
HOH
381
4
HOH
HOH
381
A
HOH
382
4
HOH
HOH
382
A
HOH
383
4
HOH
HOH
383
A
HOH
384
4
HOH
HOH
384
A
HOH
385
4
HOH
HOH
385
A
HOH
386
4
HOH
HOH
386
A
HOH
387
4
HOH
HOH
387
A
HOH
388
4
HOH
HOH
388
A
HOH
389
4
HOH
HOH
389
A
HOH
390
4
HOH
HOH
390
A
HOH
391
4
HOH
HOH
391
A
HOH
392
4
HOH
HOH
392
A
HOH
393
4
HOH
HOH
393
A
HOH
394
4
HOH
HOH
394
A
HOH
395
4
HOH
HOH
395
A
HOH
396
4
HOH
HOH
396
A
HOH
397
4
HOH
HOH
397
A
HOH
398
4
HOH
HOH
398
A
HOH
399
4
HOH
HOH
399
A
HOH
400
4
HOH
HOH
400
A
HOH
401
4
HOH
HOH
401
A
HOH
402
4
HOH
HOH
402
A
HOH
403
4
HOH
HOH
403
A
HOH
404
4
HOH
HOH
404
A
HOH
405
4
HOH
HOH
405
A
HOH
406
4
HOH
HOH
406
A
HOH
407
4
HOH
HOH
407
A
HOH
408
4
HOH
HOH
408
A
HOH
409
4
HOH
HOH
409
A
HOH
410
4
HOH
HOH
410
A
HOH
411
4
HOH
HOH
411
A
HOH
412
4
HOH
HOH
412
A
HOH
413
4
HOH
HOH
413
A
HOH
414
4
HOH
HOH
414
A
HOH
415
4
HOH
HOH
415
A
HOH
416
4
HOH
HOH
416
A
HOH
417
4
HOH
HOH
417
A
HOH
418
4
HOH
HOH
418
A
HOH
419
4
HOH
HOH
419
A
HOH
420
4
HOH
HOH
420
A
HOH
421
4
HOH
HOH
421
A
HOH
422
4
HOH
HOH
422
A
HOH
423
4
HOH
HOH
423
A
HOH
424
4
HOH
HOH
424
A
HOH
425
4
HOH
HOH
425
A
HOH
426
4
HOH
HOH
426
A
HOH
427
4
HOH
HOH
427
A
HOH
428
4
HOH
HOH
428
A
HOH
429
4
HOH
HOH
429
A
HOH
430
4
HOH
HOH
430
A
HOH
431
4
HOH
HOH
431
A
HOH
432
4
HOH
HOH
432
A
HOH
433
4
HOH
HOH
433
A
HOH
434
4
HOH
HOH
434
A
HOH
435
4
HOH
HOH
435
A
HOH
436
4
HOH
HOH
436
A
HOH
437
4
HOH
HOH
437
A
HOH
438
4
HOH
HOH
438
A
HOH
439
4
HOH
HOH
439
A
HOH
440
4
HOH
HOH
440
A
HOH
441
4
HOH
HOH
441
A
HOH
442
4
HOH
HOH
442
A
HOH
443
4
HOH
HOH
443
A
HOH
444
4
HOH
HOH
444
A
HOH
445
4
HOH
HOH
445
A
HOH
446
4
HOH
HOH
446
A
HOH
447
4
HOH
HOH
447
A
n
1
1
A
THR
2
n
2
THR
2
A
VAL
3
n
3
VAL
3
A
PRO
4
n
4
PRO
4
A
SER
5
n
5
SER
5
A
ILE
6
n
6
ILE
6
A
VAL
7
n
7
VAL
7
A
LEU
8
n
8
LEU
8
A
ASN
9
n
9
ASN
9
A
ASP
10
n
10
ASP
10
A
GLY
11
n
11
GLY
11
A
ASN
12
n
12
ASN
12
A
SER
13
n
13
SER
13
A
ILE
14
n
14
ILE
14
A
PRO
15
n
15
PRO
15
A
GLN
16
n
16
GLN
16
A
LEU
17
n
17
LEU
17
A
GLY
18
n
18
GLY
18
A
TYR
19
n
19
TYR
19
A
GLY
20
n
20
GLY
20
A
VAL
21
n
21
VAL
21
A
TYR
22
n
22
TYR
22
A
LYS
23
n
23
LYS
23
A
VAL
24
n
24
VAL
24
A
PRO
25
n
25
PRO
25
A
PRO
26
n
26
PRO
26
A
ALA
27
n
27
ALA
27
A
ASP
28
n
28
ASP
28
A
THR
29
n
29
THR
29
A
GLN
30
n
30
GLN
30
A
ARG
31
n
31
ARG
31
A
ALA
32
n
32
ALA
32
A
VAL
33
n
33
VAL
33
A
GLU
34
n
34
GLU
34
A
GLU
35
n
35
GLU
35
A
ALA
36
n
36
ALA
36
A
LEU
37
n
37
LEU
37
A
GLU
38
n
38
GLU
38
A
VAL
39
n
39
VAL
39
A
GLY
40
n
40
GLY
40
A
TYR
41
n
41
TYR
41
A
ARG
42
n
42
ARG
42
A
HIS
43
n
43
HIS
43
A
ILE
44
n
44
ILE
44
A
ASP
45
n
45
ASP
45
A
THR
46
n
46
THR
46
A
ALA
47
n
47
ALA
47
A
ALA
48
n
48
ALA
48
A
ILE
49
n
49
ILE
49
A
TYR
50
n
50
TYR
50
A
GLY
51
n
51
GLY
51
A
ASN
52
n
52
ASN
52
A
GLU
53
n
53
GLU
53
A
GLU
54
n
54
GLU
54
A
GLY
55
n
55
GLY
55
A
VAL
56
n
56
VAL
56
A
GLY
57
n
57
GLY
57
A
ALA
58
n
58
ALA
58
A
ALA
59
n
59
ALA
59
A
ILE
60
n
60
ILE
60
A
ALA
61
n
61
ALA
61
A
ALA
62
n
62
ALA
62
A
SER
63
n
63
SER
63
A
GLY
64
n
64
GLY
64
A
ILE
65
n
65
ILE
65
A
ALA
66
n
66
ALA
66
A
ARG
67
n
67
ARG
67
A
ASP
68
n
68
ASP
68
A
ASP
69
n
69
ASP
69
A
LEU
70
n
70
LEU
70
A
PHE
71
n
71
PHE
71
A
ILE
72
n
72
ILE
72
A
THR
73
n
73
THR
73
A
THR
74
n
74
THR
74
A
LYS
75
n
75
LYS
75
A
LEU
76
n
76
LEU
76
A
TRP
77
n
77
TRP
77
A
ASN
78
n
78
ASN
78
A
ASP
79
n
79
ASP
79
A
ARG
80
n
80
ARG
80
A
HIS
81
n
81
HIS
81
A
ASP
82
n
82
ASP
82
A
GLY
83
n
83
GLY
83
A
ASP
84
n
84
ASP
84
A
GLU
85
n
85
GLU
85
A
PRO
86
n
86
PRO
86
A
ALA
87
n
87
ALA
87
A
ALA
88
n
88
ALA
88
A
ALA
89
n
89
ALA
89
A
ILE
90
n
90
ILE
90
A
ALA
91
n
91
ALA
91
A
GLU
92
n
92
GLU
92
A
SER
93
n
93
SER
93
A
LEU
94
n
94
LEU
94
A
ALA
95
n
95
ALA
95
A
LYS
96
n
96
LYS
96
A
LEU
97
n
97
LEU
97
A
ALA
98
n
98
ALA
98
A
LEU
99
n
99
LEU
99
A
ASP
100
n
100
ASP
100
A
GLN
101
n
101
GLN
101
A
VAL
102
n
102
VAL
102
A
ASP
103
n
103
ASP
103
A
LEU
104
n
104
LEU
104
A
TYR
105
n
105
TYR
105
A
LEU
106
n
106
LEU
106
A
VAL
107
n
107
VAL
107
A
HIS
108
n
108
HIS
108
A
TRP
109
n
109
TRP
109
A
PRO
110
n
110
PRO
110
A
THR
111
n
111
THR
111
A
PRO
112
n
112
PRO
112
A
ALA
113
n
113
ALA
113
A
ALA
114
n
114
ALA
114
A
ASP
115
n
115
ASP
115
A
ASN
116
n
116
ASN
116
A
TYR
117
n
117
TYR
117
A
VAL
118
n
118
VAL
118
A
HIS
119
n
119
HIS
119
A
ALA
120
n
120
ALA
120
A
TRP
121
n
121
TRP
121
A
GLU
122
n
122
GLU
122
A
LYS
123
n
123
LYS
123
A
MET
124
n
124
MET
124
A
ILE
125
n
125
ILE
125
A
GLU
126
n
126
GLU
126
A
LEU
127
n
127
LEU
127
A
ARG
128
n
128
ARG
128
A
ALA
129
n
129
ALA
129
A
ALA
130
n
130
ALA
130
A
GLY
131
n
131
GLY
131
A
LEU
132
n
132
LEU
132
A
THR
133
n
133
THR
133
A
ARG
134
n
134
ARG
134
A
SER
135
n
135
SER
135
A
ILE
136
n
136
ILE
136
A
GLY
137
n
137
GLY
137
A
VAL
138
n
138
VAL
138
A
SER
139
n
139
SER
139
A
ASN
140
n
140
ASN
140
A
HIS
141
n
141
HIS
141
A
LEU
142
n
142
LEU
142
A
VAL
143
n
143
VAL
143
A
PRO
144
n
144
PRO
144
A
HIS
145
n
145
HIS
145
A
LEU
146
n
146
LEU
146
A
GLU
147
n
147
GLU
147
A
ARG
148
n
148
ARG
148
A
ILE
149
n
149
ILE
149
A
VAL
150
n
150
VAL
150
A
ALA
151
n
151
ALA
151
A
ALA
152
n
152
ALA
152
A
THR
153
n
153
THR
153
A
GLY
154
n
154
GLY
154
A
VAL
155
n
155
VAL
155
A
VAL
156
n
156
VAL
156
A
PRO
157
n
157
PRO
157
A
ALA
158
n
158
ALA
158
A
VAL
159
n
159
VAL
159
A
ASN
160
n
160
ASN
160
A
GLN
161
n
161
GLN
161
A
ILE
162
n
162
ILE
162
A
GLU
163
n
163
GLU
163
A
LEU
164
n
164
LEU
164
A
HIS
165
n
165
HIS
165
A
PRO
166
n
166
PRO
166
A
ALA
167
n
167
ALA
167
A
TYR
168
n
168
TYR
168
A
GLN
169
n
169
GLN
169
A
GLN
170
n
170
GLN
170
A
ARG
171
n
171
ARG
171
A
GLU
172
n
172
GLU
172
A
ILE
173
n
173
ILE
173
A
THR
174
n
174
THR
174
A
ASP
175
n
175
ASP
175
A
TRP
176
n
176
TRP
176
A
ALA
177
n
177
ALA
177
A
ALA
178
n
178
ALA
178
A
ALA
179
n
179
ALA
179
A
HIS
180
n
180
HIS
180
A
ASP
181
n
181
ASP
181
A
VAL
182
n
182
VAL
182
A
LYS
183
n
183
LYS
183
A
ILE
184
n
184
ILE
184
A
GLU
185
n
185
GLU
185
A
SER
186
n
186
SER
186
A
TRP
187
n
187
TRP
187
A
GLY
188
n
188
GLY
188
A
PRO
189
n
189
PRO
189
A
LEU
190
n
190
LEU
190
A
GLY
191
n
191
GLY
191
A
GLN
192
n
192
GLN
192
A
GLY
193
n
193
GLY
193
A
LYS
194
n
194
LYS
194
A
TYR
195
n
195
TYR
195
A
ASP
196
n
196
ASP
196
A
LEU
197
n
197
LEU
197
A
PHE
198
n
198
PHE
198
A
GLY
199
n
199
GLY
199
A
ALA
200
n
200
ALA
200
A
GLU
201
n
201
GLU
201
A
PRO
202
n
202
PRO
202
A
VAL
203
n
203
VAL
203
A
THR
204
n
204
THR
204
A
ALA
205
n
205
ALA
205
A
ALA
206
n
206
ALA
206
A
ALA
207
n
207
ALA
207
A
ALA
208
n
208
ALA
208
A
ALA
209
n
209
ALA
209
A
HIS
210
n
210
HIS
210
A
GLY
211
n
211
GLY
211
A
LYS
212
n
212
LYS
212
A
THR
213
n
213
THR
213
A
PRO
214
n
214
PRO
214
A
ALA
215
n
215
ALA
215
A
GLN
216
n
216
GLN
216
A
ALA
217
n
217
ALA
217
A
VAL
218
n
218
VAL
218
A
LEU
219
n
219
LEU
219
A
ARG
220
n
220
ARG
220
A
TRP
221
n
221
TRP
221
A
HIS
222
n
222
HIS
222
A
LEU
223
n
223
LEU
223
A
GLN
224
n
224
GLN
224
A
LYS
225
n
225
LYS
225
A
GLY
226
n
226
GLY
226
A
PHE
227
n
227
PHE
227
A
VAL
228
n
228
VAL
228
A
VAL
229
n
229
VAL
229
A
PHE
230
n
230
PHE
230
A
PRO
231
n
231
PRO
231
A
GLY
232
n
232
GLY
232
A
SER
233
n
233
SER
233
A
VAL
234
n
234
VAL
234
A
ARG
235
n
235
ARG
235
A
ARG
236
n
236
ARG
236
A
GLU
237
n
237
GLU
237
A
HIS
238
n
238
HIS
238
A
LEU
239
n
239
LEU
239
A
GLU
240
n
240
GLU
240
A
GLU
241
n
241
GLU
241
A
ASN
242
n
242
ASN
242
A
LEU
243
n
243
LEU
243
A
ASP
244
n
244
ASP
244
A
VAL
245
n
245
VAL
245
A
PHE
246
n
246
PHE
246
A
ASP
247
n
247
ASP
247
A
PHE
248
n
248
PHE
248
A
ASP
249
n
249
ASP
249
A
LEU
250
n
250
LEU
250
A
THR
251
n
251
THR
251
A
ASP
252
n
252
ASP
252
A
THR
253
n
253
THR
253
A
GLU
254
n
254
GLU
254
A
ILE
255
n
255
ILE
255
A
ALA
256
n
256
ALA
256
A
ALA
257
n
257
ALA
257
A
ILE
258
n
258
ILE
258
A
ASP
259
n
259
ASP
259
A
ALA
260
n
260
ALA
260
A
MET
261
n
261
MET
261
A
ASP
262
n
262
ASP
262
A
PRO
263
n
263
PRO
263
A
GLY
264
n
264
GLY
264
A
ASP
265
n
265
ASP
265
A
GLY
266
n
266
GLY
266
A
SER
267
n
267
SER
267
A
GLY
268
n
268
GLY
268
A
ARG
269
n
269
ARG
269
A
VAL
270
n
270
VAL
270
A
SER
271
n
271
SER
271
A
GLY
272
n
272
GLY
272
A
HIS
273
n
273
HIS
273
A
PRO
274
n
274
PRO
274
A
ASP
275
n
275
ASP
275
A
GLU
276
n
276
GLU
276
A
VAL
277
n
277
VAL
277
A
ASP
278
n
278
ASP
278
A
author_and_software_defined_assembly
PQS
1
monomeric
software_defined_assembly
PISA
2
dimeric
4360
-53
19890
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
2_656
-x+1,y,-z+1
crystal symmetry operation
92.9266885482
0.0000000000
47.9007851857
A
N
ILE
6
A
N
ILE
6
A
O
ILE
14
A
O
ILE
14
A
N
TYR
19
A
N
TYR
19
A
O
HIS
43
A
O
HIS
43
A
N
ILE
44
A
N
ILE
44
A
O
PHE
71
A
O
PHE
71
A
N
LEU
76
A
N
LEU
76
A
O
LEU
106
A
O
LEU
106
A
N
TYR
105
A
N
TYR
105
A
O
GLY
137
A
O
GLY
137
A
N
VAL
138
A
N
VAL
138
A
O
VAL
159
A
O
VAL
159
A
N
ILE
162
A
N
ILE
162
A
O
TRP
187
A
O
TRP
187
A
N
SER
186
A
N
SER
186
A
O
VAL
228
A
O
VAL
228
1
A
CG
ARG
31
A
CG
ARG
31
1
Y
1
A
CD
ARG
31
A
CD
ARG
31
1
Y
1
A
NE
ARG
31
A
NE
ARG
31
1
Y
1
A
CZ
ARG
31
A
CZ
ARG
31
1
Y
1
A
NH1
ARG
31
A
NH1
ARG
31
1
Y
1
A
NH2
ARG
31
A
NH2
ARG
31
1
Y
1
A
CG
ASP
278
A
CG
ASP
278
1
Y
1
A
OD1
ASP
278
A
OD1
ASP
278
1
Y
1
A
OD2
ASP
278
A
OD2
ASP
278
1
Y
1
A
MET
1
A
MET
1
1
Y
1
5.47
0.90
118.30
123.77
A
A
A
CB
CG
OD1
ASP
ASP
ASP
28
28
28
N
1
-6.28
0.90
118.30
112.02
A
A
A
CB
CG
OD2
ASP
ASP
ASP
28
28
28
N
1
5.62
0.90
118.30
123.92
A
A
A
CB
CG
OD1
ASP
ASP
ASP
68
68
68
N
1
-5.97
0.90
118.30
112.33
A
A
A
CB
CG
OD2
ASP
ASP
ASP
68
68
68
N
1
-5.69
0.90
118.30
112.61
A
A
A
CB
CG
OD2
ASP
ASP
ASP
69
69
69
N
1
5.61
0.90
118.30
123.91
A
A
A
CB
CG
OD1
ASP
ASP
ASP
79
79
79
N
1
-5.79
0.90
118.30
112.51
A
A
A
CB
CG
OD2
ASP
ASP
ASP
79
79
79
N
1
-5.45
0.90
118.30
112.85
A
A
A
CB
CG
OD2
ASP
ASP
ASP
84
84
84
N
1
-5.48
0.90
118.30
112.82
A
A
A
CB
CG
OD2
ASP
ASP
ASP
100
100
100
N
1
-5.41
0.90
118.30
112.89
A
A
A
CB
CG
OD2
ASP
ASP
ASP
115
115
115
N
1
-5.72
0.90
118.30
112.58
A
A
A
CB
CG
OD2
ASP
ASP
ASP
181
181
181
N
1
-5.66
0.90
118.30
112.64
A
A
A
CB
CG
OD2
ASP
ASP
ASP
196
196
196
N
1
-5.63
0.90
118.30
112.67
A
A
A
CB
CG
OD2
ASP
ASP
ASP
244
244
244
N
1
-5.72
0.90
118.30
112.58
A
A
A
CB
CG
OD2
ASP
ASP
ASP
247
247
247
N
1
-5.67
0.90
118.30
112.63
A
A
A
CB
CG
OD2
ASP
ASP
ASP
249
249
249
N
1
5.86
0.90
118.30
124.16
A
A
A
CB
CG
OD1
ASP
ASP
ASP
259
259
259
N
1
-6.79
0.90
118.30
111.51
A
A
A
CB
CG
OD2
ASP
ASP
ASP
259
259
259
N
1
-5.41
0.90
118.30
112.89
A
A
A
CB
CG
OD2
ASP
ASP
ASP
262
262
262
N
1
-5.50
0.90
118.30
112.80
A
A
A
CB
CG
OD2
ASP
ASP
ASP
275
275
275
N
1
A
LYS
23
78.99
-13.65
1
A
THR
46
-126.28
-169.78
1
A
ILE
65
-26.90
130.42
1
A
PHE
230
-149.98
59.09
1
A
SER
233
178.49
143.43
1
A
SER
271
-126.58
-165.47
0.261
0.213
0.214
0.214
2.0
40.0
561
20178
17803
Random
1
THROUGHOUT
3.0
3.0
MOLECULAR REPLACEMENT
PDB ENTRY 1A80
TRONRUD
2.0
40.0
146
2301
49
0
2106
1.5
0.008
14.9
0.52
0.31
2.05
46
1102
15.0
2.0
40.00
1M9H
20178
17803
3.0
-3.0
0.114
1,2
16.6
4.5
88.2
0.276
2.0
2.05
4.2
1,2
83.3
data reduction
DENZO
data scaling
SCALEPACK
refinement
TNT
phasing
TNT
Corynebacterium 2,5-DKGR A and Phe 22 replaced with Tyr (F22Y), Lys 232 replaced with Gly (K232G), Arg 238 replaced with His (R238H)and Ala 272 replaced with Gly (A272G)in presence of NADH cofactor
1
N
N
2
N
N
3
N
N
4
N
N
A
PRO
25
A
PRO
25
HELX_P
A
GLY
40
A
GLY
40
1
1
16
A
ALA
47
A
ALA
47
HELX_P
A
GLY
51
A
GLY
51
5
2
5
A
ASN
52
A
ASN
52
HELX_P
A
SER
63
A
SER
63
1
3
12
A
ALA
66
A
ALA
66
HELX_P
A
LEU
70
A
LEU
70
5
4
5
A
TRP
77
A
TRP
77
HELX_P
A
HIS
81
A
HIS
81
5
5
5
A
ASP
84
A
ASP
84
HELX_P
A
ALA
98
A
ALA
98
1
6
15
A
THR
111
A
THR
111
HELX_P
A
ASP
115
A
ASP
115
5
7
5
A
ASN
116
A
ASN
116
HELX_P
A
ALA
130
A
ALA
130
1
8
15
A
LEU
142
A
LEU
142
HELX_P
A
GLY
154
A
GLY
154
1
9
13
A
GLN
170
A
GLN
170
HELX_P
A
ASP
181
A
ASP
181
1
10
12
A
LEU
190
A
LEU
190
HELX_P
A
LYS
194
A
LYS
194
5
11
5
A
ALA
200
A
ALA
200
HELX_P
A
ALA
209
A
ALA
209
1
12
10
A
THR
213
A
THR
213
HELX_P
A
LYS
225
A
LYS
225
1
13
13
A
ARG
235
A
ARG
235
HELX_P
A
ASP
244
A
ASP
244
1
14
10
A
THR
251
A
THR
251
HELX_P
A
ALA
260
A
ALA
260
1
15
10
OXIDOREDUCTASE
TIM-barrel, OXIDOREDUCTASE
DKGA_CORSC
UNP
1
0
P06632
MTVPSIVLNDGNSIPQLGYGVFKVPPADTQRAVEEALEVGYRHIDTAAIYGNEEGVGAAIAASGIARDDLFITTKLWNDR
HDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAADNYVHAWEKMIELRAAGLTRSIGVSNHLVPHLERIVAATGVVPAVN
QIELHPAYQQREITDWAAAHDVKIESWGPLGQGKYDLFGAEPVTAAAAAHGKTPAQAVLRWHLQKGFVVFPKSVRRERLE
ENLDVFDFDLTDTEIAAIDAMDPGDGSGRVSAHPDEVD
0
277
1M9H
1
278
P06632
A
1
1
278
1
PHE
engineered mutation
TYR
22
1M9H
A
P06632
UNP
21
22
1
LYS
engineered mutation
GLY
232
1M9H
A
P06632
UNP
231
232
1
ARG
engineered mutation
HIS
238
1M9H
A
P06632
UNP
237
238
1
ALA
engineered mutation
GLY
272
1M9H
A
P06632
UNP
271
272
2
8
anti-parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
A
SER
5
A
SER
5
A
VAL
7
A
VAL
7
A
SER
13
A
SER
13
A
PRO
15
A
PRO
15
A
TYR
19
A
TYR
19
A
GLY
20
A
GLY
20
A
HIS
43
A
HIS
43
A
ASP
45
A
ASP
45
A
PHE
71
A
PHE
71
A
LEU
76
A
LEU
76
A
VAL
102
A
VAL
102
A
VAL
107
A
VAL
107
A
THR
133
A
THR
133
A
SER
139
A
SER
139
A
VAL
159
A
VAL
159
A
GLU
163
A
GLU
163
A
LYS
183
A
LYS
183
A
TRP
187
A
TRP
187
A
VAL
228
A
VAL
228
A
VAL
229
A
VAL
229
BINDING SITE FOR RESIDUE SO4 A 301
A
SO4
301
Software
8
BINDING SITE FOR RESIDUE NAD A 300
A
NAD
300
Software
25
A
ILE
6
A
ILE
6
8
2_656
A
VAL
7
A
VAL
7
8
2_656
A
LYS
183
A
LYS
183
8
2_656
A
ARG
220
A
ARG
220
8
1_555
A
PHE
246
A
PHE
246
8
1_555
A
HOH
325
D
HOH
8
1_555
A
HOH
337
D
HOH
8
1_555
A
HOH
338
D
HOH
8
1_555
A
GLY
20
A
GLY
20
25
1_555
A
VAL
21
A
VAL
21
25
1_555
A
TYR
22
A
TYR
22
25
1_555
A
ASP
45
A
ASP
45
25
1_555
A
TYR
50
A
TYR
50
25
1_555
A
HIS
108
A
HIS
108
25
1_555
A
SER
139
A
SER
139
25
1_555
A
ASN
140
A
ASN
140
25
1_555
A
GLN
161
A
GLN
161
25
1_555
A
TRP
187
A
TRP
187
25
1_555
A
GLY
188
A
GLY
188
25
1_555
A
PRO
189
A
PRO
189
25
1_555
A
LEU
190
A
LEU
190
25
1_555
A
GLY
191
A
GLY
191
25
1_555
A
GLN
192
A
GLN
192
25
1_555
A
PHE
198
A
PHE
198
25
1_555
A
ALA
215
A
ALA
215
25
1_555
A
PHE
230
A
PHE
230
25
1_555
A
PRO
231
A
PRO
231
25
1_555
A
GLY
232
A
GLY
232
25
1_555
A
SER
233
A
SER
233
25
1_555
A
HIS
238
A
HIS
238
25
1_555
A
GLU
241
A
GLU
241
25
1_555
A
ASN
242
A
ASN
242
25
1_555
A
HOH
382
D
HOH
25
1_555
5
C 1 2 1