1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Ogata, K. Morikawa, S. Nakamura, H. Hojo, H. Yoshimura, S. Zhang, R. Aimoto, S. Ametani, Y. Hirata, Z. Sarai, A. Ishii, S. Nishimura, Y. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking H2 N 16.023 AMINO GROUP non-polymer C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Nat.Struct.Biol. NSBIEW 2024 1072-8368 2 309 320 10.1038/nsb0495-309 7796266 Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb. 1995 US Cell(Cambridge,Mass.) CELLB5 0998 0092-8674 79 639 Solution Structure of a Specific DNA Complex of the Myb DNA-Binding Domain with Cooperative Recognition Helices 1994 US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 89 6428 Solution Structure of a DNA-Binding Unit of Myb: A Helix-Turn-Helix-Related Motif with Conserved Tryptophans Forming a Hydrophobic Core 1992 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 GENE C-MYB, NMR, MINIMIZED AVERAGE STRUCTURE; ENGINEERED 6259.194 MYB PROTO-ONCOGENE PROTEIN 1 nat polymer no yes VKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKV(NH2) VKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVX A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n house mouse Mus sample 10090 Mus musculus repository Initial release Version format compliance Version format compliance Database references 1 0 1995-07-31 1 1 2008-03-24 1 2 2011-07-13 1 3 2012-02-29 Y 1995-05-19 REL 1 6.8 290 K 6.8 300 K A TOTAL OF 50 STRUCTURES WERE CALCULATED. THE COORDINATES OF THE RESTRAINED MINIMIZED AVERAGED STRUCTURE WERE OBTAINED BY AVERAGING THE COORDINATES OF THE INDIVIDUAL STRUCTURES, AND THEN BY SUBJECTING THE RESULTING COORDINATES TO THE RESTRAINED ENERGY MINIMIZATION BY PRESTO. NAKAI,KIDERA,NAKAMURA refinement EMBOSS MORIKAMI,NAKAI,KIDERA,SAITO,NAKAMURA refinement PRESTO VAL 142 n 1 VAL 142 A LYS 143 n 2 LYS 143 A LYS 144 n 3 LYS 144 A THR 145 n 4 THR 145 A SER 146 n 5 SER 146 A TRP 147 n 6 TRP 147 A THR 148 n 7 THR 148 A GLU 149 n 8 GLU 149 A GLU 150 n 9 GLU 150 A GLU 151 n 10 GLU 151 A ASP 152 n 11 ASP 152 A ARG 153 n 12 ARG 153 A ILE 154 n 13 ILE 154 A ILE 155 n 14 ILE 155 A TYR 156 n 15 TYR 156 A GLN 157 n 16 GLN 157 A ALA 158 n 17 ALA 158 A HIS 159 n 18 HIS 159 A LYS 160 n 19 LYS 160 A ARG 161 n 20 ARG 161 A LEU 162 n 21 LEU 162 A GLY 163 n 22 GLY 163 A ASN 164 n 23 ASN 164 A ARG 165 n 24 ARG 165 A TRP 166 n 25 TRP 166 A ALA 167 n 26 ALA 167 A GLU 168 n 27 GLU 168 A ILE 169 n 28 ILE 169 A ALA 170 n 29 ALA 170 A LYS 171 n 30 LYS 171 A LEU 172 n 31 LEU 172 A LEU 173 n 32 LEU 173 A PRO 174 n 33 PRO 174 A GLY 175 n 34 GLY 175 A ARG 176 n 35 ARG 176 A THR 177 n 36 THR 177 A ASP 178 n 37 ASP 178 A ASN 179 n 38 ASN 179 A ALA 180 n 39 ALA 180 A ILE 181 n 40 ILE 181 A LYS 182 n 41 LYS 182 A ASN 183 n 42 ASN 183 A HIS 184 n 43 HIS 184 A TRP 185 n 44 TRP 185 A ASN 186 n 45 ASN 186 A SER 187 n 46 SER 187 A THR 188 n 47 THR 188 A MET 189 n 48 MET 189 A ARG 190 n 49 ARG 190 A ARG 191 n 50 ARG 191 A LYS 192 n 51 LYS 192 A VAL 193 n 52 VAL 193 A NH2 194 n 53 NH2 194 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A THR 145 42.86 -153.39 1 A TRP 147 62.48 115.78 1 A ASN 164 -83.22 33.36 1 A SER 187 -165.57 -52.81 1 A MET 189 -106.18 66.54 1 A ARG 191 -119.05 67.21 refinement AMBER MYB PROTO-ONCOGENE PROTEIN MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 3 1 Y N A GLU 149 A GLU 8 HELX_P A LEU 162 A LEU 21 1 H1 14 A TRP 166 A TRP 25 HELX_P A LEU 172 A LEU 31 1 H2 7 A ASP 178 A ASP 37 HELX_P A SER 187 A SER 46 1 H3 10 covale 1.337 A VAL 193 A C VAL 52 1_555 A NH2 194 A N NH2 53 1_555 DNA BINDING PROTEIN PROTOONCOGENE PRODUCT, DNA BINDING PROTEIN MYB_MOUSE UNP 1 1 P06876 MARRPRHSIYSSDEDDEDIEMCDHDYDGLLPKSGKRHLGKTRWTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQH RWQKVLNPELIKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHK RLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQEPSKASQTPVATSFQKNNHLMGFGHASPPSQLSPSGQSSV NSEYPYYHIAEAQNISSHVPYPVALHVNIVNVPQPAAAAIQRHYNDEDPEKEKRIKELELLLMSTENELKGQQALPTQNH TCSYPGWHSTSIVDQTRPHGDSAPVSCLGEHHATPSLPADPGSLPEESASPARCMIVHQGTILDNVKNLLEFAETLQFID SFLNTSSNHESSGLDAPTLPSTPLIGHKLTPCRDQTVKTQKENSIFRTPAIKRSILESSPRTPTPFKHALAAQEIKYGPL KMLPQTPSHAVEDLQDVIKRESDESGIVAEFQESGPPLLKKIKQEVESPTEKSGNFFCSNHWAENSLSTQLFSQASPVAD APNILTSSVLMTPVSEDEDNVLKAFTVPKNRPLVGPLQPCSGAWEPASCGKTEDQMTASGPARKYVNAFSARTLVM 142 193 1MBJ 142 193 P06876 A 1 1 52 BINDING SITE FOR RESIDUE NH2 A 194 Software 2 A TYR 156 A TYR 15 2 1_555 A VAL 193 A VAL 52 2 1_555 1 P 1