0.018139
0.010473
0.000000
0.000000
0.020945
0.000000
0.000000
0.000000
0.012478
0.00000
0.00000
0.00000
Notenboom, V.
Boraston, A.B.
Williams, S.J.
Kilburn, D.G.
Rose, D.R.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
55.130
55.130
80.142
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
C5 H10 O5
150.130
beta-D-xylopyranose
D-saccharide, beta linking
US
Biochemistry
BICHAW
0033
0006-2960
41
4246
4254
10.1021/bi015865j
11914070
High-resolution crystal structures of the lectin-like xylan binding domain from Streptomyces lividans xylanase 10A with bound substrates reveal a novel mode of xylan binding.
2002
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
CCD
2000-03-20
ADSC QUANTUM 4
GRAPHITE
SINGLE WAVELENGTH
M
x-ray
1
1.0
1.0
14-BM-D
APS
1.0
1.0
SYNCHROTRON
APS BEAMLINE 14-BM-D
13608.731
ENDO-1,4-BETA-XYLANASE A
3.2.1.8
CARBOHYDRATE BINDING MODULE (RESIDUES 348-477)
1
man
polymer
678.589
beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
1
man
branched
96.063
SULFATE ION
1
syn
non-polymer
92.094
GLYCEROL
1
syn
non-polymer
18.015
water
187
nat
water
XYLANASE A, 1,4-BETA-D-XYLAN XYLANOHYDROLASE A
no
no
EPPADGGQIKGVGSGRCLDVPDASTSDGTQLQLWDCHSGTNQQWAATDAGELRVYGDKCLDAAGTSNGSKVQIYSCWGGD
NQKWRLNSDGSVVGVQSGLCLDAVGNGTANGTLIQLYTCSNGSNQRWTRT
EPPADGGQIKGVGSGRCLDVPDASTSDGTQLQLWDCHSGTNQQWAATDAGELRVYGDKCLDAAGTSNGSKVQIYSCWGGD
NQKWRLNSDGSVVGVQSGLCLDAVGNGTANGTLIQLYTCSNGSNQRWTRT
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Streptomyces
Escherichia
sample
1916
Streptomyces lividans
562
Escherichia coli
1
2.58
52.38
VAPOR DIFFUSION, HANGING DROP
6.50
1.8 mM ammonium sulfate, 50 mM MES (pH 6.5), and 5% dioxane, pH 6.50, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
atom_site
chem_comp
entity
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_nonpoly_scheme
pdbx_struct_assembly_gen
pdbx_struct_special_symmetry
pdbx_validate_close_contact
struct_asym
struct_conn
struct_site
struct_site_gen
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Non-polymer description
Version format compliance
Advisory
Atomic model
Data collection
Derived calculations
Structure summary
1
0
2002-09-11
1
1
2008-04-28
1
2
2011-07-13
2
0
2020-07-29
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_atom_site.label_atom_id
_chem_comp.name
_chem_comp.type
_entity.formula_weight
_entity.pdbx_description
_entity.pdbx_number_of_molecules
_entity.type
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_special_symmetry.label_asym_id
_pdbx_validate_close_contact.auth_asym_id_1
_pdbx_validate_close_contact.auth_atom_id_1
_pdbx_validate_close_contact.auth_seq_id_1
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
XYS
131
n
B
XYP
1
XYS
132
n
B
XYP
2
XYS
133
n
B
XYP
3
XYS
134
n
B
XYP
4
XYS
135
n
B
XYP
5
DXylpb
b-D-xylopyranose
b-D-Xylp
Xyl
2002-09-11
SPRSDE
STREPROMYCES LIVIDANS XYLAN BINDING DOMAIN CBM13
STREPROMYCES LIVIDANS XYLAN BINDING DOMAIN CBM13 IN COMPLEX WITH LACTOSE
RCSB
Y
RCSB
2002-08-06
REL
oligosaccharide
DXylpb1-4DXylpb1-4DXylpb1-4DXylpb1-4DXylpb1-ROH
2
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/1,5,4/[a212h-1b_1-5]/1-1-1-1-1/a4-b1_b4-c1_c4-d1_d4-e1
2
PDB2Glycan
1.1.0
WURCS
[][b-D-Xylp]{[(4+1)][b-D-Xylp]{[(4+1)][b-D-Xylp]{[(4+1)][b-D-Xylp]{[(4+1)][b-D-Xylp]{}}}}}
2
PDB-CARE
LINUCS
C1
O4
XYP
XYP
2
1
2
O1
HO4
sing
C1
O4
XYP
XYP
3
2
2
O1
HO4
sing
C1
O4
XYP
XYP
4
3
2
O1
HO4
sing
C1
O4
XYP
XYP
5
4
2
O1
HO4
sing
n
n
n
n
n
SO4
SULFATE ION
GOL
GLYCEROL
HOH
water
SO4
130
3
SO4
SO4
130
A
GOL
136
4
GOL
GOL
136
A
HOH
137
5
HOH
HOH
137
A
HOH
138
5
HOH
HOH
138
A
HOH
139
5
HOH
HOH
139
A
HOH
140
5
HOH
HOH
140
A
HOH
141
5
HOH
HOH
141
A
HOH
142
5
HOH
HOH
142
A
HOH
143
5
HOH
HOH
143
A
HOH
144
5
HOH
HOH
144
A
HOH
145
5
HOH
HOH
145
A
HOH
146
5
HOH
HOH
146
A
HOH
147
5
HOH
HOH
147
A
HOH
148
5
HOH
HOH
148
A
HOH
149
5
HOH
HOH
149
A
HOH
150
5
HOH
HOH
150
A
HOH
151
5
HOH
HOH
151
A
HOH
152
5
HOH
HOH
152
A
HOH
153
5
HOH
HOH
153
A
HOH
154
5
HOH
HOH
154
A
HOH
155
5
HOH
HOH
155
A
HOH
156
5
HOH
HOH
156
A
HOH
157
5
HOH
HOH
157
A
HOH
158
5
HOH
HOH
158
A
HOH
159
5
HOH
HOH
159
A
HOH
160
5
HOH
HOH
160
A
HOH
161
5
HOH
HOH
161
A
HOH
162
5
HOH
HOH
162
A
HOH
163
5
HOH
HOH
163
A
HOH
164
5
HOH
HOH
164
A
HOH
165
5
HOH
HOH
165
A
HOH
166
5
HOH
HOH
166
A
HOH
167
5
HOH
HOH
167
A
HOH
168
5
HOH
HOH
168
A
HOH
169
5
HOH
HOH
169
A
HOH
170
5
HOH
HOH
170
A
HOH
171
5
HOH
HOH
171
A
HOH
172
5
HOH
HOH
172
A
HOH
173
5
HOH
HOH
173
A
HOH
174
5
HOH
HOH
174
A
HOH
175
5
HOH
HOH
175
A
HOH
176
5
HOH
HOH
176
A
HOH
177
5
HOH
HOH
177
A
HOH
178
5
HOH
HOH
178
A
HOH
179
5
HOH
HOH
179
A
HOH
180
5
HOH
HOH
180
A
HOH
181
5
HOH
HOH
181
A
HOH
182
5
HOH
HOH
182
A
HOH
183
5
HOH
HOH
183
A
HOH
184
5
HOH
HOH
184
A
HOH
185
5
HOH
HOH
185
A
HOH
186
5
HOH
HOH
186
A
HOH
187
5
HOH
HOH
187
A
HOH
188
5
HOH
HOH
188
A
HOH
189
5
HOH
HOH
189
A
HOH
190
5
HOH
HOH
190
A
HOH
191
5
HOH
HOH
191
A
HOH
192
5
HOH
HOH
192
A
HOH
193
5
HOH
HOH
193
A
HOH
194
5
HOH
HOH
194
A
HOH
195
5
HOH
HOH
195
A
HOH
196
5
HOH
HOH
196
A
HOH
197
5
HOH
HOH
197
A
HOH
198
5
HOH
HOH
198
A
HOH
199
5
HOH
HOH
199
A
HOH
200
5
HOH
HOH
200
A
HOH
201
5
HOH
HOH
201
A
HOH
202
5
HOH
HOH
202
A
HOH
203
5
HOH
HOH
203
A
HOH
204
5
HOH
HOH
204
A
HOH
205
5
HOH
HOH
205
A
HOH
206
5
HOH
HOH
206
A
HOH
207
5
HOH
HOH
207
A
HOH
208
5
HOH
HOH
208
A
HOH
209
5
HOH
HOH
209
A
HOH
210
5
HOH
HOH
210
A
HOH
211
5
HOH
HOH
211
A
HOH
212
5
HOH
HOH
212
A
HOH
213
5
HOH
HOH
213
A
HOH
214
5
HOH
HOH
214
A
HOH
215
5
HOH
HOH
215
A
HOH
216
5
HOH
HOH
216
A
HOH
217
5
HOH
HOH
217
A
HOH
218
5
HOH
HOH
218
A
HOH
219
5
HOH
HOH
219
A
HOH
220
5
HOH
HOH
220
A
HOH
221
5
HOH
HOH
221
A
HOH
222
5
HOH
HOH
222
A
HOH
223
5
HOH
HOH
223
A
HOH
224
5
HOH
HOH
224
A
HOH
225
5
HOH
HOH
225
A
HOH
226
5
HOH
HOH
226
A
HOH
227
5
HOH
HOH
227
A
HOH
228
5
HOH
HOH
228
A
HOH
229
5
HOH
HOH
229
A
HOH
230
5
HOH
HOH
230
A
HOH
231
5
HOH
HOH
231
A
HOH
232
5
HOH
HOH
232
A
HOH
233
5
HOH
HOH
233
A
HOH
234
5
HOH
HOH
234
A
HOH
235
5
HOH
HOH
235
A
HOH
236
5
HOH
HOH
236
A
HOH
237
5
HOH
HOH
237
A
HOH
238
5
HOH
HOH
238
A
HOH
239
5
HOH
HOH
239
A
HOH
240
5
HOH
HOH
240
A
HOH
241
5
HOH
HOH
241
A
HOH
242
5
HOH
HOH
242
A
HOH
243
5
HOH
HOH
243
A
HOH
244
5
HOH
HOH
244
A
HOH
245
5
HOH
HOH
245
A
HOH
246
5
HOH
HOH
246
A
HOH
247
5
HOH
HOH
247
A
HOH
248
5
HOH
HOH
248
A
HOH
249
5
HOH
HOH
249
A
HOH
250
5
HOH
HOH
250
A
HOH
251
5
HOH
HOH
251
A
HOH
252
5
HOH
HOH
252
A
HOH
253
5
HOH
HOH
253
A
HOH
254
5
HOH
HOH
254
A
HOH
255
5
HOH
HOH
255
A
HOH
256
5
HOH
HOH
256
A
HOH
257
5
HOH
HOH
257
A
HOH
258
5
HOH
HOH
258
A
HOH
259
5
HOH
HOH
259
A
HOH
260
5
HOH
HOH
260
A
HOH
261
5
HOH
HOH
261
A
HOH
262
5
HOH
HOH
262
A
HOH
263
5
HOH
HOH
263
A
HOH
264
5
HOH
HOH
264
A
HOH
265
5
HOH
HOH
265
A
HOH
266
5
HOH
HOH
266
A
HOH
267
5
HOH
HOH
267
A
HOH
268
5
HOH
HOH
268
A
HOH
269
5
HOH
HOH
269
A
HOH
270
5
HOH
HOH
270
A
HOH
271
5
HOH
HOH
271
A
HOH
272
5
HOH
HOH
272
A
HOH
273
5
HOH
HOH
273
A
HOH
274
5
HOH
HOH
274
A
HOH
275
5
HOH
HOH
275
A
HOH
276
5
HOH
HOH
276
A
HOH
277
5
HOH
HOH
277
A
HOH
278
5
HOH
HOH
278
A
HOH
279
5
HOH
HOH
279
A
HOH
280
5
HOH
HOH
280
A
HOH
281
5
HOH
HOH
281
A
HOH
282
5
HOH
HOH
282
A
HOH
283
5
HOH
HOH
283
A
HOH
284
5
HOH
HOH
284
A
HOH
285
5
HOH
HOH
285
A
HOH
286
5
HOH
HOH
286
A
HOH
287
5
HOH
HOH
287
A
HOH
288
5
HOH
HOH
288
A
HOH
289
5
HOH
HOH
289
A
HOH
290
5
HOH
HOH
290
A
HOH
291
5
HOH
HOH
291
A
HOH
292
5
HOH
HOH
292
A
HOH
293
5
HOH
HOH
293
A
HOH
294
5
HOH
HOH
294
A
HOH
295
5
HOH
HOH
295
A
HOH
296
5
HOH
HOH
296
A
HOH
297
5
HOH
HOH
297
A
HOH
298
5
HOH
HOH
298
A
HOH
299
5
HOH
HOH
299
A
HOH
300
5
HOH
HOH
300
A
HOH
301
5
HOH
HOH
301
A
HOH
302
5
HOH
HOH
302
A
HOH
303
5
HOH
HOH
303
A
HOH
304
5
HOH
HOH
304
A
HOH
305
5
HOH
HOH
305
A
HOH
306
5
HOH
HOH
306
A
HOH
307
5
HOH
HOH
307
A
HOH
308
5
HOH
HOH
308
A
HOH
309
5
HOH
HOH
309
A
HOH
310
5
HOH
HOH
310
A
HOH
311
5
HOH
HOH
311
A
HOH
312
5
HOH
HOH
312
A
HOH
313
5
HOH
HOH
313
A
HOH
314
5
HOH
HOH
314
A
HOH
315
5
HOH
HOH
315
A
HOH
316
5
HOH
HOH
316
A
HOH
317
5
HOH
HOH
317
A
HOH
318
5
HOH
HOH
318
A
HOH
319
5
HOH
HOH
319
A
HOH
320
5
HOH
HOH
320
A
HOH
321
5
HOH
HOH
321
A
HOH
322
5
HOH
HOH
322
A
HOH
323
5
HOH
HOH
323
A
n
1
0
A
n
2
1
A
n
3
2
A
n
4
3
A
ASP
4
n
5
ASP
4
A
GLY
5
n
6
GLY
5
A
GLY
6
n
7
GLY
6
A
GLN
7
n
8
GLN
7
A
ILE
8
n
9
ILE
8
A
LYS
9
n
10
LYS
9
A
GLY
10
n
11
GLY
10
A
VAL
11
n
12
VAL
11
A
GLY
12
n
13
GLY
12
A
SER
13
n
14
SER
13
A
GLY
14
n
15
GLY
14
A
ARG
15
n
16
ARG
15
A
CYS
16
n
17
CYS
16
A
LEU
17
n
18
LEU
17
A
ASP
18
n
19
ASP
18
A
VAL
19
n
20
VAL
19
A
PRO
20
n
21
PRO
20
A
ASP
21
n
22
ASP
21
A
ALA
22
n
23
ALA
22
A
SER
23
n
24
SER
23
A
THR
24
n
25
THR
24
A
SER
25
n
26
SER
25
A
ASP
26
n
27
ASP
26
A
GLY
27
n
28
GLY
27
A
THR
28
n
29
THR
28
A
GLN
29
n
30
GLN
29
A
LEU
30
n
31
LEU
30
A
GLN
31
n
32
GLN
31
A
LEU
32
n
33
LEU
32
A
TRP
33
n
34
TRP
33
A
ASP
34
n
35
ASP
34
A
CYS
35
n
36
CYS
35
A
HIS
36
n
37
HIS
36
A
SER
37
n
38
SER
37
A
GLY
38
n
39
GLY
38
A
THR
39
n
40
THR
39
A
ASN
40
n
41
ASN
40
A
GLN
41
n
42
GLN
41
A
GLN
42
n
43
GLN
42
A
TRP
43
n
44
TRP
43
A
ALA
44
n
45
ALA
44
A
ALA
45
n
46
ALA
45
A
THR
46
n
47
THR
46
A
ASP
47
n
48
ASP
47
A
ALA
48
n
49
ALA
48
A
GLY
49
n
50
GLY
49
A
GLU
50
n
51
GLU
50
A
LEU
51
n
52
LEU
51
A
ARG
52
n
53
ARG
52
A
VAL
53
n
54
VAL
53
A
TYR
54
n
55
TYR
54
A
GLY
55
n
56
GLY
55
A
ASP
56
n
57
ASP
56
A
LYS
57
n
58
LYS
57
A
CYS
58
n
59
CYS
58
A
LEU
59
n
60
LEU
59
A
ASP
60
n
61
ASP
60
A
ALA
61
n
62
ALA
61
A
ALA
62
n
63
ALA
62
A
GLY
63
n
64
GLY
63
A
THR
64
n
65
THR
64
A
SER
65
n
66
SER
65
A
ASN
66
n
67
ASN
66
A
GLY
67
n
68
GLY
67
A
SER
68
n
69
SER
68
A
LYS
69
n
70
LYS
69
A
VAL
70
n
71
VAL
70
A
GLN
71
n
72
GLN
71
A
ILE
72
n
73
ILE
72
A
TYR
73
n
74
TYR
73
A
SER
74
n
75
SER
74
A
CYS
75
n
76
CYS
75
A
TRP
76
n
77
TRP
76
A
GLY
77
n
78
GLY
77
A
GLY
78
n
79
GLY
78
A
ASP
79
n
80
ASP
79
A
ASN
80
n
81
ASN
80
A
GLN
81
n
82
GLN
81
A
LYS
82
n
83
LYS
82
A
TRP
83
n
84
TRP
83
A
ARG
84
n
85
ARG
84
A
LEU
85
n
86
LEU
85
A
ASN
86
n
87
ASN
86
A
SER
87
n
88
SER
87
A
ASP
88
n
89
ASP
88
A
GLY
89
n
90
GLY
89
A
SER
90
n
91
SER
90
A
VAL
91
n
92
VAL
91
A
VAL
92
n
93
VAL
92
A
GLY
93
n
94
GLY
93
A
VAL
94
n
95
VAL
94
A
GLN
95
n
96
GLN
95
A
SER
96
n
97
SER
96
A
GLY
97
n
98
GLY
97
A
LEU
98
n
99
LEU
98
A
CYS
99
n
100
CYS
99
A
LEU
100
n
101
LEU
100
A
ASP
101
n
102
ASP
101
A
ALA
102
n
103
ALA
102
A
VAL
103
n
104
VAL
103
A
GLY
104
n
105
GLY
104
A
ASN
105
n
106
ASN
105
A
GLY
106
n
107
GLY
106
A
THR
107
n
108
THR
107
A
ALA
108
n
109
ALA
108
A
ASN
109
n
110
ASN
109
A
GLY
110
n
111
GLY
110
A
THR
111
n
112
THR
111
A
LEU
112
n
113
LEU
112
A
ILE
113
n
114
ILE
113
A
GLN
114
n
115
GLN
114
A
LEU
115
n
116
LEU
115
A
TYR
116
n
117
TYR
116
A
THR
117
n
118
THR
117
A
CYS
118
n
119
CYS
118
A
SER
119
n
120
SER
119
A
ASN
120
n
121
ASN
120
A
GLY
121
n
122
GLY
121
A
SER
122
n
123
SER
122
A
ASN
123
n
124
ASN
123
A
GLN
124
n
125
GLN
124
A
ARG
125
n
126
ARG
125
A
TRP
126
n
127
TRP
126
A
THR
127
n
128
THR
127
A
ARG
128
n
129
ARG
128
A
THR
129
n
130
THR
129
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LYS
9
A
N
LYS
10
A
O
THR
127
A
O
THR
128
A
N
ASP
18
A
N
ASP
19
A
O
GLN
31
A
O
GLN
32
A
N
ALA
44
A
N
ALA
45
A
O
ARG
52
A
O
ARG
53
A
N
VAL
53
A
N
VAL
54
A
O
LYS
57
A
O
LYS
58
A
N
CYS
58
A
N
CYS
59
A
O
TYR
73
A
O
TYR
74
A
N
ARG
84
A
N
ARG
85
A
O
VAL
92
A
O
VAL
93
A
N
CYS
99
A
N
CYS
100
A
O
TYR
116
A
O
TYR
117
1
A
HOH
296
E
HOH
1
A
GLU
0
A
GLU
1
1
Y
1
A
PRO
1
A
PRO
2
1
Y
1
A
PRO
2
A
PRO
3
1
Y
1
A
ALA
3
A
ALA
4
1
Y
1
B
A
O4
O
XYP
HOH
5
285
1.96
1
A
A
O
O
HOH
HOH
155
315
2.04
1
A
LEU
85
-20.10
1
A
ASN
86
-19.80
1
A
ASN
86
0.286
SIDE CHAIN
1
-14.15
2.30
115.30
101.15
A
A
A
CA
CB
CG
LEU
LEU
LEU
30
30
30
N
1
-23.13
1.70
111.00
87.87
A
A
A
CB
CG
CD1
LEU
LEU
LEU
85
85
85
N
1
-18.43
2.70
111.00
92.57
A
A
A
N
CA
C
LEU
LEU
LEU
85
85
85
N
1
-12.07
2.00
110.40
98.33
A
A
A
CB
CA
C
ASN
ASN
ASN
86
86
86
N
1
-19.03
2.30
121.90
102.87
A
A
A
OD1
CG
ND2
ASN
ASN
ASN
86
86
86
N
1
-40.18
2.00
121.60
81.42
A
A
A
CB
CG
OD1
ASN
ASN
ASN
86
86
86
N
1
-18.27
2.70
111.00
92.73
A
A
A
N
CA
C
ASN
ASN
ASN
86
86
86
N
1
-13.75
2.20
117.20
103.45
A
A
A
CA
C
N
ASN
ASN
SER
86
86
87
Y
1
6.23
0.90
118.30
124.53
A
A
A
CB
CG
OD2
ASP
ASP
ASP
88
88
88
N
1
A
A
CG
CD1
LEU
LEU
85
85
1.121
0.037
1.514
2.635
N
1
A
A
CG
CD2
LEU
LEU
85
85
0.601
0.037
1.514
2.115
N
1
A
A
CA
C
LEU
LEU
85
85
0.449
0.026
1.525
1.974
N
1
A
A
CG
OD1
ASN
ASN
86
86
1.308
0.022
1.235
2.543
N
1
A
A
CA
C
ASN
ASN
86
86
0.373
0.026
1.525
1.898
N
1
A
TRP
76
-142.65
-4.50
1
A
ARG
128
92.02
-173.71
0.22
0.164
0.176
0.176
1.70
18.05
664
13471
5.000
RANDOM
1
0.000
MOLECULAR REPLACEMENT
Engh & Huber
1.70
18.05
187
1168
57
0
924
0.007
1.440
1.700
18.050
1MC9
13471
0.00
2.000
1
83.1
1.70
1.74
1
23.4
data reduction
DENZO
data scaling
SCALEPACK
phasing
AMoRE
refinement
REFMAC
ENDO-1,4-BETA-XYLANASE A (E.C.3.2.1.8)
STREPROMYCES LIVIDANS XYLAN BINDING DOMAIN CBM13 IN COMPLEX WITH XYLOPENTAOSE
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
A
VAL
19
A
VAL
20
HELX_P
A
SER
23
A
SER
24
5
1
5
A
GLY
38
A
GLY
39
HELX_P
A
GLN
42
A
GLN
43
5
2
5
A
GLY
78
A
GLY
79
HELX_P
A
GLN
81
A
GLN
82
5
3
4
A
GLY
104
A
GLY
105
HELX_P
A
GLY
106
A
GLY
107
5
4
3
A
GLY
121
A
GLY
122
HELX_P
A
GLN
124
A
GLN
125
5
5
4
disulf
2.059
A
CYS
16
A
SG
CYS
17
1_555
A
CYS
35
A
SG
CYS
36
1_555
disulf
2.034
A
CYS
58
A
SG
CYS
59
1_555
A
CYS
75
A
SG
CYS
76
1_555
disulf
2.601
A
CYS
99
A
SG
CYS
100
1_555
A
CYS
118
A
SG
CYS
119
1_555
covale
1.388
none
B
XYP
1
B
O4
XYP
1_555
B
XYP
2
B
C1
XYP
1_555
covale
1.393
none
B
XYP
2
B
O4
XYP
1_555
B
XYP
3
B
C1
XYP
1_555
covale
1.385
none
B
XYP
3
B
O4
XYP
1_555
B
XYP
4
B
C1
XYP
1_555
covale
1.383
none
B
XYP
4
B
O4
XYP
1_555
B
XYP
5
B
C1
XYP
1_555
HYDROLASE
XYLANASE A XYLAN BINDING DOMAIN CBM13, LECTIN-LIKE BETA-TREFOIL FOLD, XYLOPENTAOSE COMPLEX, HYDROLASE
XYNA_STRLI
UNP
1
348
P26514
EPPADGGQIKGVGSGRCLDVPDASTSDGTQLQLWDCHSGTNQQWAATDAGELRVYGDKCLDAAGTSNGSKVQIYSCWGGD
NQKWRLNSDGSVVGVQSGLCLDAVGNGTANGTLIQLYTCSNGSNQRWTRT
348
477
1MC9
0
129
P26514
A
1
1
130
2
2
4
2
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LYS
9
A
LYS
10
A
GLY
10
A
GLY
11
A
TRP
126
A
TRP
127
A
THR
127
A
THR
128
A
CYS
16
A
CYS
17
A
ASP
18
A
ASP
19
A
GLN
31
A
GLN
32
A
TRP
33
A
TRP
34
A
ALA
44
A
ALA
45
A
ALA
45
A
ALA
46
A
LEU
51
A
LEU
52
A
VAL
53
A
VAL
54
A
LYS
57
A
LYS
58
A
ALA
61
A
ALA
62
A
VAL
70
A
VAL
71
A
SER
74
A
SER
75
A
TRP
83
A
TRP
84
A
LEU
85
A
LEU
86
A
VAL
91
A
VAL
92
A
GLY
93
A
GLY
94
A
CYS
99
A
CYS
100
A
ALA
102
A
ALA
103
A
ILE
113
A
ILE
114
A
TYR
116
A
TYR
117
154
P 32 2 1