1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Summers, M.F.
Turner, B.G.
De Guzman, R.N.
Lee, B.M.
Tjandra, N.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
279
633
649
10.1006/jmbi.1998.1766
9641983
Dynamical behavior of the HIV-1 nucleocapsid protein.
1998
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
6386.495
HIV-1 NUCLEOCAPSID PROTEIN
NUCLEOCAPSID, ZINC BINDING DOMAINS
1
man
polymer
65.409
ZINC ION
2
syn
non-polymer
no
no
MQKGNFRNQRKTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQAN
MQKGNFRNQRKTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQAN
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Lentivirus
NL4-3
Escherichia
sample
BL21
NC
12721
Human immunodeficiency virus
NC
562
Escherichia coli
BL21 (DE3) PLYSE
PET-3A
pdbx_database_status
pdbx_struct_assembly
pdbx_struct_oper_list
struct_conf
struct_conf_type
repository
Initial release
Version format compliance
Version format compliance
Derived calculations
Other
1
0
1998-06-17
1
1
2008-03-24
1
2
2011-07-13
1
3
2017-11-29
_pdbx_database_status.process_site
Y
BNL
1998-04-01
REL
REL
ZN
ZINC ION
LEAST RESTRAINT VIOLATION
30
30
2D NOESY
TOCSY
HSQC
HMQC
3D NOESY-HSQC
3D TOCSY-HSQC
3D HMQC-NOESY
4D CNNOE
6.5
298
K
DETAILS OF THE REFINEMENT AND STRATEGY ARE LOCATED IN THE PUBLICATION
distance geometry
WUTHRICH
refinement
DIANA
2.8
structure solution
DIANA
600
Bruker
BRUKER DMX
600
GE
GE OMEGA
ZN
28
2
ZN
ZN
56
A
ZN
49
2
ZN
ZN
57
A
MET
1
n
1
MET
1
A
GLN
2
n
2
GLN
2
A
LYS
3
n
3
LYS
3
A
GLY
4
n
4
GLY
4
A
ASN
5
n
5
ASN
5
A
PHE
6
n
6
PHE
6
A
ARG
7
n
7
ARG
7
A
ASN
8
n
8
ASN
8
A
GLN
9
n
9
GLN
9
A
ARG
10
n
10
ARG
10
A
LYS
11
n
11
LYS
11
A
THR
12
n
12
THR
12
A
VAL
13
n
13
VAL
13
A
LYS
14
n
14
LYS
14
A
CYS
15
n
15
CYS
15
A
PHE
16
n
16
PHE
16
A
ASN
17
n
17
ASN
17
A
CYS
18
n
18
CYS
18
A
GLY
19
n
19
GLY
19
A
LYS
20
n
20
LYS
20
A
GLU
21
n
21
GLU
21
A
GLY
22
n
22
GLY
22
A
HIS
23
n
23
HIS
23
A
ILE
24
n
24
ILE
24
A
ALA
25
n
25
ALA
25
A
LYS
26
n
26
LYS
26
A
ASN
27
n
27
ASN
27
A
CYS
28
n
28
CYS
28
A
ARG
29
n
29
ARG
29
A
ALA
30
n
30
ALA
30
A
PRO
31
n
31
PRO
31
A
ARG
32
n
32
ARG
32
A
LYS
33
n
33
LYS
33
A
LYS
34
n
34
LYS
34
A
GLY
35
n
35
GLY
35
A
CYS
36
n
36
CYS
36
A
TRP
37
n
37
TRP
37
A
LYS
38
n
38
LYS
38
A
CYS
39
n
39
CYS
39
A
GLY
40
n
40
GLY
40
A
LYS
41
n
41
LYS
41
A
GLU
42
n
42
GLU
42
A
GLY
43
n
43
GLY
43
A
HIS
44
n
44
HIS
44
A
GLN
45
n
45
GLN
45
A
MET
46
n
46
MET
46
A
LYS
47
n
47
LYS
47
A
ASP
48
n
48
ASP
48
A
CYS
49
n
49
CYS
49
A
THR
50
n
50
THR
50
A
GLU
51
n
51
GLU
51
A
ARG
52
n
52
ARG
52
A
GLN
53
n
53
GLN
53
A
ALA
54
n
54
ALA
54
A
ASN
55
n
55
ASN
55
A
author_defined_assembly
1
monomeric
A
CYS
15
A
SG
CYS
15
1_555
A
ZN
56
B
ZN
ZN
1_555
A
CYS
18
A
SG
CYS
18
1_555
85.9
A
CYS
15
A
SG
CYS
15
1_555
A
ZN
56
B
ZN
ZN
1_555
A
HIS
23
A
NE2
HIS
23
1_555
86.0
A
CYS
18
A
SG
CYS
18
1_555
A
ZN
56
B
ZN
ZN
1_555
A
HIS
23
A
NE2
HIS
23
1_555
93.6
A
CYS
15
A
SG
CYS
15
1_555
A
ZN
56
B
ZN
ZN
1_555
A
CYS
28
A
SG
CYS
28
1_555
105.6
A
CYS
18
A
SG
CYS
18
1_555
A
ZN
56
B
ZN
ZN
1_555
A
CYS
28
A
SG
CYS
28
1_555
131.8
A
HIS
23
A
NE2
HIS
23
1_555
A
ZN
56
B
ZN
ZN
1_555
A
CYS
28
A
SG
CYS
28
1_555
133.1
A
CYS
36
A
SG
CYS
36
1_555
A
ZN
57
C
ZN
ZN
1_555
A
CYS
39
A
SG
CYS
39
1_555
85.8
A
CYS
36
A
SG
CYS
36
1_555
A
ZN
57
C
ZN
ZN
1_555
A
HIS
44
A
NE2
HIS
44
1_555
105.1
A
CYS
39
A
SG
CYS
39
1_555
A
ZN
57
C
ZN
ZN
1_555
A
HIS
44
A
NE2
HIS
44
1_555
82.4
A
CYS
36
A
SG
CYS
36
1_555
A
ZN
57
C
ZN
ZN
1_555
A
CYS
49
A
SG
CYS
49
1_555
123.9
A
CYS
39
A
SG
CYS
39
1_555
A
ZN
57
C
ZN
ZN
1_555
A
CYS
49
A
SG
CYS
49
1_555
139.2
A
HIS
44
A
NE2
HIS
44
1_555
A
ZN
57
C
ZN
ZN
1_555
A
CYS
49
A
SG
CYS
49
1_555
111.2
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
identity operation
0.0000000000
0.0000000000
0.0000000000
11
A
A
O
HE21
GLY
GLN
35
45
1.52
20
A
A
OD1
HH11
ASN
ARG
5
29
1.55
1
A
PHE
6
-138.06
-45.05
1
A
ARG
7
-100.81
76.06
1
A
ASN
8
60.42
-84.38
1
A
GLN
9
-178.18
-64.35
1
A
LYS
11
86.27
162.31
1
A
THR
12
46.93
-164.15
1
A
VAL
13
48.25
-174.40
1
A
ARG
32
179.57
165.21
1
A
LYS
33
40.50
-104.31
1
A
LYS
41
-56.09
101.11
1
A
ALA
54
74.32
-62.18
2
A
GLN
2
179.88
-59.20
2
A
LYS
3
-168.41
-62.74
2
A
ASN
5
176.28
113.81
2
A
PHE
6
41.77
-164.36
2
A
ARG
7
71.94
-61.28
2
A
ASN
8
-137.85
-52.59
2
A
GLN
9
-69.35
80.29
2
A
ARG
10
-172.19
83.68
2
A
VAL
13
-41.85
160.44
2
A
ALA
30
60.02
153.63
2
A
ARG
32
-108.20
-91.01
2
A
LYS
34
71.88
-60.16
2
A
LYS
47
-39.79
-30.89
2
A
ASP
48
-155.14
45.14
2
A
ARG
52
65.25
129.22
2
A
GLN
53
63.91
-76.98
3
A
GLN
2
-120.88
-59.62
3
A
LYS
3
74.34
-66.43
3
A
ASN
5
-159.96
-50.93
3
A
GLN
9
70.93
61.18
3
A
ARG
10
-134.16
-69.77
3
A
ARG
32
-165.54
94.20
3
A
LYS
33
-104.49
78.30
3
A
LYS
34
75.24
-76.34
3
A
ASP
48
-156.21
40.05
3
A
CYS
49
-73.55
-103.24
3
A
THR
50
51.78
19.55
3
A
GLU
51
-78.29
-152.44
3
A
ALA
54
64.63
-77.86
4
A
GLN
2
179.75
172.94
4
A
ASN
5
170.66
139.80
4
A
PHE
6
55.56
102.39
4
A
ARG
7
-170.03
57.76
4
A
HIS
23
-175.08
-179.94
4
A
LYS
33
-50.68
-73.12
4
A
LYS
34
76.96
-148.80
4
A
ALA
54
74.54
-62.03
5
A
GLN
2
-90.77
-74.31
5
A
LYS
3
-136.29
-63.04
5
A
ARG
7
38.98
76.48
5
A
ASN
8
-143.02
-49.86
5
A
GLN
9
60.26
159.46
5
A
ARG
10
-55.77
107.84
5
A
ARG
32
-161.77
92.39
5
A
GLU
51
65.14
164.81
5
A
ARG
52
61.94
-86.12
6
A
GLN
2
-150.96
64.52
6
A
PHE
6
176.73
-41.18
6
A
GLN
9
64.60
163.16
6
A
ARG
10
-92.99
57.15
6
A
LYS
11
-92.44
-64.48
6
A
LYS
33
40.47
-148.81
6
A
ARG
52
-173.84
146.17
6
A
GLN
53
48.04
71.86
7
A
LYS
3
-166.92
-67.97
7
A
ASN
5
80.58
-55.67
7
A
ASN
8
-172.73
104.98
7
A
GLN
9
53.33
101.81
7
A
ARG
10
63.90
130.81
7
A
ALA
30
-39.55
99.91
7
A
ARG
32
61.89
105.65
7
A
LYS
34
-119.04
68.19
8
A
GLN
2
85.35
-1.35
8
A
LYS
3
-59.16
-158.73
8
A
PHE
6
67.81
-65.65
8
A
ARG
7
170.18
51.52
8
A
GLN
9
60.92
143.50
8
A
ARG
10
76.89
-61.36
8
A
LYS
11
71.93
-68.66
8
A
THR
12
60.48
147.31
8
A
ALA
30
40.64
81.14
8
A
ARG
32
71.01
-59.31
8
A
LYS
33
-46.77
167.47
8
A
LYS
34
51.08
179.40
8
A
ARG
52
-172.76
-56.57
8
A
GLN
53
56.47
169.46
9
A
GLN
2
64.50
-77.29
9
A
ASN
5
-179.45
-55.44
9
A
PHE
6
-41.28
108.24
9
A
ASN
8
61.98
162.32
9
A
GLN
9
-142.48
-58.38
9
A
ARG
10
179.97
168.22
9
A
LYS
11
-175.51
-42.12
9
A
THR
12
45.24
-167.24
9
A
ALA
30
-39.56
99.96
9
A
LYS
33
52.69
75.35
9
A
GLU
51
74.72
-59.62
9
A
ARG
52
72.96
-58.25
9
A
ALA
54
-159.79
-61.12
10
A
GLN
2
46.69
88.59
10
A
PHE
6
58.44
162.93
10
A
ARG
7
58.81
88.07
10
A
GLN
9
53.28
98.36
10
A
ARG
10
-67.78
82.77
10
A
LYS
11
-100.54
-90.37
10
A
THR
12
-155.57
-75.62
10
A
VAL
13
41.28
-157.25
10
A
ALA
30
41.46
84.73
10
A
ARG
32
-175.77
-62.79
10
A
LYS
33
51.81
98.31
10
A
LYS
34
44.37
-167.44
10
A
HIS
44
-134.59
-155.06
10
A
GLN
45
178.60
-176.89
10
A
ASP
48
-156.18
40.22
10
A
CYS
49
-74.21
-103.75
10
A
THR
50
52.89
18.85
10
A
GLU
51
61.79
144.56
11
A
GLN
2
-174.36
-59.30
11
A
LYS
3
-175.27
140.50
11
A
ASN
8
44.26
-166.33
11
A
ARG
10
68.13
-72.32
11
A
LYS
11
83.40
142.40
11
A
ALA
30
-39.51
99.96
11
A
ASP
48
-156.06
40.73
11
A
ARG
52
64.37
-79.62
11
A
GLN
53
70.35
-70.52
12
A
PHE
6
41.47
-163.83
12
A
ARG
7
-67.59
-170.01
12
A
ASN
8
72.62
167.45
12
A
GLN
9
64.75
79.46
12
A
ARG
10
73.01
-76.74
12
A
LYS
11
-174.42
-67.31
12
A
THR
12
46.59
-149.22
12
A
VAL
13
49.31
-176.76
12
A
ALA
30
42.59
87.60
12
A
ARG
32
-172.42
67.63
12
A
LYS
33
77.03
172.17
12
A
LYS
34
73.85
58.34
12
A
GLN
53
38.56
-97.26
13
A
ASN
5
61.74
122.90
13
A
ASN
8
-53.46
104.39
13
A
LYS
11
-110.62
-142.01
13
A
THR
12
47.52
70.80
13
A
VAL
13
49.62
-178.07
13
A
ALA
30
40.45
83.54
13
A
ARG
32
67.12
164.20
13
A
LYS
34
88.25
-12.89
13
A
ALA
54
-131.31
-64.39
14
A
LYS
3
-157.11
68.08
14
A
ASN
5
175.74
92.65
14
A
THR
12
42.32
92.12
14
A
ARG
32
-40.85
161.54
14
A
LYS
34
-164.64
90.25
14
A
ASP
48
-156.20
39.96
15
A
GLN
2
-169.01
-59.26
15
A
LYS
3
-167.50
-62.74
15
A
ASN
5
-59.22
96.46
15
A
ARG
7
62.92
158.35
15
A
THR
12
-158.82
34.26
15
A
VAL
13
-112.21
-165.57
15
A
LYS
33
-98.92
-62.03
15
A
LYS
34
60.43
-105.67
15
A
GLN
53
62.95
68.80
16
A
GLN
2
-154.84
64.53
16
A
LYS
3
-172.80
135.37
16
A
ASN
8
68.23
120.98
16
A
GLN
9
63.96
84.42
16
A
LYS
11
-138.66
-58.80
16
A
LYS
33
64.90
-78.03
16
A
GLU
51
58.05
161.39
16
A
ARG
52
177.76
62.63
16
A
GLN
53
173.38
-34.24
16
A
ALA
54
58.24
171.09
17
A
LYS
3
60.76
84.73
17
A
ASN
5
40.86
-160.12
17
A
PHE
6
-88.48
38.47
17
A
ARG
7
44.70
-168.92
17
A
ASN
8
178.44
-48.28
17
A
GLN
9
84.29
-48.72
17
A
LYS
11
-136.40
-47.27
17
A
THR
12
64.03
-88.44
17
A
LYS
33
43.08
-164.18
17
A
LYS
34
-167.33
102.21
17
A
GLU
42
-95.81
52.67
17
A
GLU
51
66.64
173.28
17
A
ARG
52
52.62
102.22
17
A
ALA
54
70.17
-62.71
18
A
LYS
3
70.24
-65.77
18
A
ASN
5
63.47
159.85
18
A
ASN
8
176.17
118.62
18
A
ARG
10
-167.80
-48.95
18
A
VAL
13
-45.82
155.08
18
A
ALA
30
41.06
78.55
18
A
LYS
34
69.66
70.39
18
A
ARG
52
60.27
118.53
18
A
ALA
54
-147.69
-61.17
19
A
LYS
3
41.67
76.88
19
A
ARG
7
172.49
-43.04
19
A
GLN
9
65.44
82.55
19
A
VAL
13
49.20
-176.46
19
A
ARG
32
-157.63
-56.77
19
A
LYS
34
53.68
88.67
19
A
GLN
53
-177.25
125.55
20
A
GLN
2
43.82
-164.13
20
A
PHE
6
-176.39
-52.19
20
A
ARG
7
-39.70
134.89
20
A
ASN
8
179.75
100.86
20
A
ARG
10
38.32
-94.19
20
A
VAL
13
49.24
-176.53
20
A
ALA
30
40.68
86.85
20
A
ARG
32
-149.82
-51.30
20
A
GLU
51
-76.47
-70.17
20
A
ARG
52
-162.65
-68.71
20
A
ALA
54
68.78
152.23
21
A
GLN
2
51.31
82.07
21
A
ASN
5
-170.68
-48.49
21
A
PHE
6
-49.76
176.72
21
A
ARG
7
40.56
-162.73
21
A
ARG
10
-139.49
-49.60
21
A
LYS
11
-148.46
-73.51
21
A
THR
12
-127.41
-87.27
21
A
ARG
32
69.67
-59.91
21
A
LYS
33
67.15
166.42
21
A
GLU
51
-85.90
46.37
21
A
ARG
52
39.07
29.85
21
A
GLN
53
59.89
150.27
21
A
ALA
54
45.96
93.29
22
A
GLN
2
-164.58
-61.01
22
A
PHE
6
-48.91
170.17
22
A
ASN
8
43.68
-166.53
22
A
PRO
31
-74.97
-71.48
22
A
LYS
33
179.83
-71.15
22
A
LYS
34
178.29
146.47
22
A
GLU
51
84.99
-66.68
22
A
ARG
52
60.03
91.71
22
A
GLN
53
-161.40
70.21
23
A
LYS
3
-174.25
63.76
23
A
ASN
5
-53.51
107.34
23
A
PHE
6
-168.56
-49.03
23
A
ARG
7
-61.78
96.31
23
A
ASN
8
40.59
89.20
23
A
ARG
32
67.04
-69.86
23
A
LYS
33
67.50
152.81
23
A
LYS
34
68.54
165.78
23
A
ARG
52
-67.11
90.95
23
A
GLN
53
-161.69
116.38
23
A
ALA
54
64.01
152.44
24
A
ASN
5
-175.44
100.88
24
A
PHE
6
56.08
-85.94
24
A
ASN
8
177.76
143.09
24
A
GLN
9
-178.96
149.41
24
A
ARG
10
68.43
-65.15
24
A
LYS
11
66.45
144.64
24
A
VAL
13
-44.32
159.11
24
A
ALA
30
-39.48
99.87
24
A
ARG
32
39.02
90.95
24
A
LYS
33
-152.37
-46.59
24
A
LYS
34
-50.40
-90.76
24
A
GLU
51
-171.79
115.71
24
A
ARG
52
-152.36
-55.52
24
A
GLN
53
60.81
170.69
24
A
ALA
54
61.18
169.59
25
A
GLN
2
47.71
-174.97
25
A
LYS
3
67.16
-72.15
25
A
ARG
7
63.31
110.31
25
A
GLN
9
-178.24
83.57
25
A
ARG
10
61.82
131.44
25
A
LYS
11
55.98
88.40
25
A
THR
12
-125.14
-52.37
25
A
CYS
28
-88.78
-156.97
25
A
ARG
29
162.82
-28.32
25
A
LYS
33
-149.82
47.86
25
A
LYS
34
177.02
-44.21
25
A
GLN
53
-171.41
-63.39
26
A
ASN
5
-178.03
113.76
26
A
ASN
8
67.66
104.36
26
A
GLN
9
-39.83
-34.12
26
A
ARG
10
61.65
133.59
26
A
LYS
11
74.28
123.85
26
A
THR
12
-75.51
-96.13
26
A
LYS
34
-158.05
-73.89
26
A
GLU
51
164.51
-83.05
26
A
GLN
53
-68.98
63.20
27
A
GLN
2
56.94
162.31
27
A
PHE
6
68.52
-61.69
27
A
ASN
8
-154.14
-53.07
27
A
GLN
9
64.41
137.53
27
A
LYS
11
-150.51
-54.56
27
A
THR
12
-64.59
93.81
27
A
ARG
32
51.53
85.81
27
A
LYS
33
-171.51
72.48
27
A
LYS
34
-53.83
170.88
27
A
CYS
49
-74.49
-103.43
27
A
GLU
51
-115.74
65.47
27
A
GLN
53
69.23
-63.66
27
A
ALA
54
78.23
-65.55
28
A
LYS
3
66.40
75.56
28
A
ASN
5
62.72
132.45
28
A
ARG
7
71.52
-59.85
28
A
GLN
9
-167.27
-42.07
28
A
ARG
10
170.58
-38.98
28
A
LYS
11
49.83
-177.63
28
A
THR
12
38.81
-150.71
28
A
ALA
30
-39.60
99.95
28
A
LYS
33
-129.93
-59.78
28
A
GLU
51
178.31
127.62
28
A
GLN
53
38.51
-97.22
28
A
ALA
54
68.59
-68.43
29
A
GLN
2
-173.15
57.79
29
A
ASN
5
-169.34
-51.59
29
A
ARG
7
40.38
-161.12
29
A
ASN
8
-170.24
-58.94
29
A
ALA
30
-40.49
153.60
29
A
ARG
32
-42.76
160.48
29
A
LYS
34
74.81
-63.27
29
A
ASP
48
-142.63
42.30
29
A
GLU
51
-113.10
79.57
29
A
ALA
54
-121.85
-61.17
30
A
PHE
6
-153.25
45.95
30
A
ARG
7
-176.05
146.04
30
A
ASN
8
177.59
128.68
30
A
GLN
9
75.96
-56.51
30
A
ARG
10
-174.65
95.04
30
A
LYS
11
44.36
-167.42
30
A
THR
12
46.15
-169.67
30
A
ALA
30
-39.50
99.98
30
A
ARG
32
-133.24
-45.85
30
A
LYS
34
-169.05
-73.21
30
A
ARG
52
-173.36
130.53
30
A
GLN
53
-173.14
62.69
HIV-1 NUCLEOCAPSID PROTEIN
DYNAMICAL BEHAVIOR OF THE HIV-1 NUCLEOCAPSID PROTEIN; NMR, 30 STRUCTURES
1
Y
N
2
N
N
2
N
N
A
ILE
24
A
ILE
24
HELX_P
A
CYS
28
A
CYS
28
1
H1
5
A
GLN
45
A
GLN
45
HELX_P
A
CYS
49
A
CYS
49
1
H2
5
metalc
2.348
A
ZN
56
B
ZN
ZN
1_555
A
CYS
15
A
SG
CYS
15
1_555
metalc
2.350
A
ZN
56
B
ZN
ZN
1_555
A
CYS
18
A
SG
CYS
18
1_555
metalc
2.049
A
ZN
56
B
ZN
ZN
1_555
A
HIS
23
A
NE2
HIS
23
1_555
metalc
2.303
A
ZN
56
B
ZN
ZN
1_555
A
CYS
28
A
SG
CYS
28
1_555
metalc
2.351
A
ZN
57
C
ZN
ZN
1_555
A
CYS
36
A
SG
CYS
36
1_555
metalc
2.350
A
ZN
57
C
ZN
ZN
1_555
A
CYS
39
A
SG
CYS
39
1_555
metalc
2.039
A
ZN
57
C
ZN
ZN
1_555
A
HIS
44
A
NE2
HIS
44
1_555
metalc
2.302
A
ZN
57
C
ZN
ZN
1_555
A
CYS
49
A
SG
CYS
49
1_555
VIRAL PROTEIN
NUCLEOCAPSID PROTEIN, DYNAMICS, ZINC KNUCKLE, HIV-1, ZINC BINDING, Viral protein
POL_HV1Y2
UNP
1
1
P35963
GARASVLSAGELDKWEKIRLRPGGKKQYRLKHIVWASRELERFAVDPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNT
VATLYCVHQKIEVKDTKEALEKIEEEQNKSKKKAQQAAADTGNSSQVSQNYPIVQNLQGQMVHQAISPRTLNAWVKVVEE
KAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTS
TLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETL
LVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSATIMMQRGNFRNQRKTVKCFNCGKEGHI
AKNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPSEESVRFGEETTTPSQKQEPIDK
ELYPLASLRSLFGSDPSSQ
377
431
1MFS
1
55
P35963
A
1
1
55
1
ARG
CONFLICT
LYS
3
1MFS
A
P35963
UNP
379
3
2
2
anti-parallel
anti-parallel
A
THR
12
A
THR
12
A
PHE
16
A
PHE
16
A
CYS
18
A
CYS
18
A
GLY
22
A
GLY
22
A
LYS
34
A
LYS
34
A
TRP
37
A
TRP
37
A
CYS
39
A
CYS
39
A
GLY
43
A
GLY
43
THESE 4 RESIDUES ARE THE ZINC BINDING LIGANDS OF THE SECOND ZINC FINGER DOMAIN OF P7.
Unknown
8
BINDING SITE FOR RESIDUE ZN A 56
Software
4
BINDING SITE FOR RESIDUE ZN A 57
Software
4
A
CYS
15
A
CYS
15
8
1_555
A
CYS
18
A
CYS
18
8
1_555
A
HIS
23
A
HIS
23
8
1_555
A
CYS
28
A
CYS
28
8
1_555
A
CYS
36
A
CYS
36
8
1_555
A
CYS
39
A
CYS
39
8
1_555
A
HIS
44
A
HIS
44
8
1_555
A
CYS
49
A
CYS
49
8
1_555
A
CYS
15
A
CYS
15
4
1_555
A
CYS
18
A
CYS
18
4
1_555
A
HIS
23
A
HIS
23
4
1_555
A
CYS
28
A
CYS
28
4
1_555
A
CYS
36
A
CYS
36
4
1_555
A
CYS
39
A
CYS
39
4
1_555
A
HIS
44
A
HIS
44
4
1_555
A
CYS
49
A
CYS
49
4
1_555
1
P 1