0.009714
0.005608
0.000000
0.000000
0.011216
0.000000
0.000000
0.000000
0.008474
0.00000
0.00000
0.00000
Kobe, B.
Center, R.J.
Kemp, B.E.
Poumbourios, P.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
9
90.00
90.00
120.00
102.947
102.947
118.005
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cl -1
35.453
CHLORIDE ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C6 H12 O6
180.156
alpha-D-glucopyranose
alpha-D-glucose; D-glucose; glucose
D-saccharide, alpha linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CL
N
75
N
N
N
76
R
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
S
N
81
N
O
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
S
C
N
90
R
C
N
91
S
C
N
92
S
C
N
93
R
C
N
94
N
C
N
95
N
O
N
96
N
O
N
97
N
O
N
98
N
O
N
99
N
O
N
100
N
O
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
S
C
N
115
N
C
N
116
N
O
N
117
N
C
N
118
N
C
N
119
N
C
N
120
N
O
N
121
N
N
N
122
N
O
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
N
N
134
S
C
N
135
N
C
N
136
N
O
N
137
N
C
N
138
N
C
N
139
N
C
N
140
N
O
N
141
N
O
N
142
N
O
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
N
N
153
N
C
N
154
N
C
N
155
N
O
N
156
N
O
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
N
N
163
S
C
N
164
N
C
N
165
N
O
N
166
N
C
Y
167
N
C
Y
168
N
N
Y
169
N
C
Y
170
N
C
Y
171
N
N
N
172
N
O
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
O
N
184
N
H
N
185
N
H
N
186
N
N
N
187
S
C
N
188
N
C
N
189
N
O
N
190
S
C
N
191
N
C
N
192
N
C
N
193
N
C
N
194
N
O
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
N
N
209
S
C
N
210
N
C
N
211
N
O
N
212
N
C
N
213
N
C
N
214
N
C
N
215
N
C
N
216
N
O
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
C
N
237
N
C
N
238
N
N
N
239
N
O
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
N
N
256
S
C
N
257
N
C
N
258
N
O
N
259
N
C
N
260
N
C
N
261
N
S
N
262
N
C
N
263
N
O
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
N
N
276
S
C
N
277
N
C
N
278
N
O
N
279
N
C
Y
280
N
C
Y
281
N
C
Y
282
N
C
Y
283
N
C
Y
284
N
C
Y
285
N
C
N
286
N
O
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
N
N
299
S
C
N
300
N
C
N
301
N
O
N
302
N
C
N
303
N
C
N
304
N
C
N
305
N
O
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
N
N
316
S
C
N
317
N
C
N
318
N
O
N
319
N
C
N
320
N
O
N
321
N
O
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
N
N
330
S
C
N
331
N
C
N
332
N
O
N
333
R
C
N
334
N
O
N
335
N
C
N
336
N
O
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
N
N
347
S
C
N
348
N
C
N
349
N
O
N
350
N
C
Y
351
N
C
Y
352
N
C
Y
353
N
C
Y
354
N
N
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
Y
359
N
C
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
N
N
374
S
C
N
375
N
C
N
376
N
O
N
377
N
C
Y
378
N
C
Y
379
N
C
Y
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
C
N
384
N
O
N
385
N
O
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
N
N
398
S
C
N
399
N
C
N
400
N
O
N
401
N
C
N
402
N
C
N
403
N
C
N
404
N
O
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
doub
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
doub
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
doub
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
doub
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
doub
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
Y
164
N
sing
Y
165
N
doub
Y
166
N
doub
N
167
N
sing
Y
168
N
sing
N
169
N
sing
Y
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
doub
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
doub
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
doub
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
doub
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
Y
272
N
doub
Y
273
N
sing
Y
274
N
sing
N
275
N
sing
Y
276
N
doub
N
277
N
sing
Y
278
N
doub
N
279
N
sing
Y
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
doub
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
doub
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
doub
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
doub
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
Y
341
N
doub
Y
342
N
sing
Y
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
sing
Y
350
N
doub
N
351
N
sing
Y
352
N
doub
N
353
N
sing
Y
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
Y
369
N
doub
Y
370
N
sing
Y
371
N
sing
N
372
N
sing
Y
373
N
doub
N
374
N
sing
Y
375
N
doub
N
376
N
sing
Y
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
doub
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
96
4319
4324
10.1073/pnas.96.8.4319
10200260
Crystal structure of human T cell leukemia virus type 1 gp21 ectodomain crystallized as a maltose-binding protein chimera reveals structural evolution of retroviral transmembrane proteins.
1999
US
Protein Sci.
PRCIEI
0795
0961-8368
7
1612
Crystallization of a Trimeric Human T Cell Leukemia Virus Type 1 Gp21 Ectodomain Fragment as a Chimera with Maltose-Binding Protein
1998
10.2210/pdb1mg1/pdb
pdb_00001mg1
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
IMAGE PLATE
1998-04-15
MARRESEARCH
GRAPHITE
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
49386.023
PROTEIN (HTLV-1 GP21 ECTODOMAIN/MALTOSE-BINDING PROTEIN CHIMERA)
GP21 ECTODOMAIN (GP62 RESIDUES 338-425)
1
man
polymer
342.297
alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
1
man
branched
35.453
CHLORIDE ION
2
syn
non-polymer
18.015
water
37
nat
water
alpha-maltose
no
no
GKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKA
FQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAAD
GGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGV
TVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENA
QKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAALAAAQTNAAAMSLASGKSLLHEVDKDISQLTQAIVKNHKNLLKI
AQYAAQNRRGLDLLFWEQGGLCKALQEQCCFLNITNSHVSILQERPPLEN
GKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKA
FQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAAD
GGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGV
TVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENA
QKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAALAAAQTNAAAMSLASGKSLLHEVDKDISQLTQAIVKNHKNLLKI
AQYAAQNRRGLDLLFWEQGGLCKALQEQCCFLNITNSHVSILQERPPLEN
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Deltaretrovirus
Primate T-lymphotropic virus 1
3-19-3
Escherichia
sample
VIRUS ENVELOPE
11908
Human T-lymphotropic virus 1
562
Escherichia coli
BL21 (DE3/PLYSS)
PMAL-C2
1
2.34
47
4.7
pH 4.7
PEG 4000
1
(NH4)2SO4
1
SODIUM ACETATE
1
atom_site
chem_comp
entity
entity_name_com
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_molecule_features
pdbx_nonpoly_scheme
struct_conn
struct_conn_type
struct_site
struct_site_gen
chem_comp
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Derived calculations
Version format compliance
Atomic model
Data collection
Derived calculations
Non-polymer description
Structure summary
Data collection
Database references
Refinement description
Structure summary
1
0
1999-04-06
1
1
2008-04-26
1
2
2011-07-13
2
0
2020-07-29
2
1
2023-12-27
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.id
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.type
_entity.formula_weight
_entity.pdbx_description
_entity.type
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
MAL
101
n
B
GLC
1
MAL
101
n
B
GLC
2
DGlcpa
a-D-glucopyranose
a-D-Glcp
Glc
BNL
Y
RCSB
1999-03-01
REL
oligosaccharide
DGlcpa1-4DGlcpa1-ROH
2
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/1,2,1/[a2122h-1a_1-5]/1-1/a4-b1
2
PDB2Glycan
1.1.0
WURCS
[][a-D-Glcp]{[(4+1)][a-D-Glcp]{}}
2
PDB-CARE
LINUCS
C1
O4
GLC
GLC
2
1
2
O1
HO4
sing
n
n
CL
CHLORIDE ION
HOH
water
1ANF
PDB
experimental model
Nutrient
oligosaccharide
alpha-maltose
Oligosaccharide
CL
51
3
CL
CL
457
A
CL
52
3
CL
CL
458
A
HOH
1
4
HOH
HOH
459
A
HOH
2
4
HOH
HOH
460
A
HOH
3
4
HOH
HOH
461
A
HOH
4
4
HOH
HOH
462
A
HOH
5
4
HOH
HOH
463
A
HOH
6
4
HOH
HOH
464
A
HOH
7
4
HOH
HOH
465
A
HOH
8
4
HOH
HOH
466
A
HOH
9
4
HOH
HOH
467
A
HOH
10
4
HOH
HOH
468
A
HOH
11
4
HOH
HOH
469
A
HOH
12
4
HOH
HOH
470
A
HOH
13
4
HOH
HOH
471
A
HOH
14
4
HOH
HOH
472
A
HOH
15
4
HOH
HOH
473
A
HOH
16
4
HOH
HOH
474
A
HOH
17
4
HOH
HOH
475
A
HOH
18
4
HOH
HOH
476
A
HOH
19
4
HOH
HOH
477
A
HOH
20
4
HOH
HOH
478
A
HOH
21
4
HOH
HOH
479
A
HOH
22
4
HOH
HOH
480
A
HOH
23
4
HOH
HOH
481
A
HOH
24
4
HOH
HOH
482
A
HOH
25
4
HOH
HOH
483
A
HOH
26
4
HOH
HOH
484
A
HOH
27
4
HOH
HOH
485
A
HOH
28
4
HOH
HOH
486
A
HOH
29
4
HOH
HOH
487
A
HOH
30
4
HOH
HOH
488
A
HOH
31
4
HOH
HOH
489
A
HOH
32
4
HOH
HOH
490
A
HOH
33
4
HOH
HOH
491
A
HOH
34
4
HOH
HOH
492
A
HOH
35
4
HOH
HOH
493
A
HOH
36
4
HOH
HOH
494
A
HOH
37
4
HOH
HOH
495
A
GLY
6
n
1
GLY
6
A
LYS
7
n
2
LYS
7
A
LEU
8
n
3
LEU
8
A
VAL
9
n
4
VAL
9
A
ILE
10
n
5
ILE
10
A
TRP
11
n
6
TRP
11
A
ILE
12
n
7
ILE
12
A
ASN
13
n
8
ASN
13
A
GLY
14
n
9
GLY
14
A
ASP
15
n
10
ASP
15
A
LYS
16
n
11
LYS
16
A
GLY
17
n
12
GLY
17
A
TYR
18
n
13
TYR
18
A
ASN
19
n
14
ASN
19
A
GLY
20
n
15
GLY
20
A
LEU
21
n
16
LEU
21
A
ALA
22
n
17
ALA
22
A
GLU
23
n
18
GLU
23
A
VAL
24
n
19
VAL
24
A
GLY
25
n
20
GLY
25
A
LYS
26
n
21
LYS
26
A
LYS
27
n
22
LYS
27
A
PHE
28
n
23
PHE
28
A
GLU
29
n
24
GLU
29
A
LYS
30
n
25
LYS
30
A
ASP
31
n
26
ASP
31
A
THR
32
n
27
THR
32
A
GLY
33
n
28
GLY
33
A
ILE
34
n
29
ILE
34
A
LYS
35
n
30
LYS
35
A
VAL
36
n
31
VAL
36
A
THR
37
n
32
THR
37
A
VAL
38
n
33
VAL
38
A
GLU
39
n
34
GLU
39
A
HIS
40
n
35
HIS
40
A
PRO
41
n
36
PRO
41
A
ASP
42
n
37
ASP
42
A
LYS
43
n
38
LYS
43
A
LEU
44
n
39
LEU
44
A
GLU
45
n
40
GLU
45
A
GLU
46
n
41
GLU
46
A
LYS
47
n
42
LYS
47
A
PHE
48
n
43
PHE
48
A
PRO
49
n
44
PRO
49
A
GLN
50
n
45
GLN
50
A
VAL
51
n
46
VAL
51
A
ALA
52
n
47
ALA
52
A
ALA
53
n
48
ALA
53
A
THR
54
n
49
THR
54
A
GLY
55
n
50
GLY
55
A
ASP
56
n
51
ASP
56
A
GLY
57
n
52
GLY
57
A
PRO
58
n
53
PRO
58
A
ASP
59
n
54
ASP
59
A
ILE
60
n
55
ILE
60
A
ILE
61
n
56
ILE
61
A
PHE
62
n
57
PHE
62
A
TRP
63
n
58
TRP
63
A
ALA
64
n
59
ALA
64
A
HIS
65
n
60
HIS
65
A
ASP
66
n
61
ASP
66
A
ARG
67
n
62
ARG
67
A
PHE
68
n
63
PHE
68
A
GLY
69
n
64
GLY
69
A
GLY
70
n
65
GLY
70
A
TYR
71
n
66
TYR
71
A
ALA
72
n
67
ALA
72
A
GLN
73
n
68
GLN
73
A
SER
74
n
69
SER
74
A
GLY
75
n
70
GLY
75
A
LEU
76
n
71
LEU
76
A
LEU
77
n
72
LEU
77
A
ALA
78
n
73
ALA
78
A
GLU
79
n
74
GLU
79
A
ILE
80
n
75
ILE
80
A
THR
81
n
76
THR
81
A
PRO
82
n
77
PRO
82
A
ASP
83
n
78
ASP
83
A
LYS
84
n
79
LYS
84
A
ALA
85
n
80
ALA
85
A
PHE
86
n
81
PHE
86
A
GLN
87
n
82
GLN
87
A
ASP
88
n
83
ASP
88
A
LYS
89
n
84
LYS
89
A
LEU
90
n
85
LEU
90
A
TYR
91
n
86
TYR
91
A
PRO
92
n
87
PRO
92
A
PHE
93
n
88
PHE
93
A
THR
94
n
89
THR
94
A
TRP
95
n
90
TRP
95
A
ASP
96
n
91
ASP
96
A
ALA
97
n
92
ALA
97
A
VAL
98
n
93
VAL
98
A
ARG
99
n
94
ARG
99
A
TYR
100
n
95
TYR
100
A
ASN
101
n
96
ASN
101
A
GLY
102
n
97
GLY
102
A
LYS
103
n
98
LYS
103
A
LEU
104
n
99
LEU
104
A
ILE
105
n
100
ILE
105
A
ALA
106
n
101
ALA
106
A
TYR
107
n
102
TYR
107
A
PRO
108
n
103
PRO
108
A
ILE
109
n
104
ILE
109
A
ALA
110
n
105
ALA
110
A
VAL
111
n
106
VAL
111
A
GLU
112
n
107
GLU
112
A
ALA
113
n
108
ALA
113
A
LEU
114
n
109
LEU
114
A
SER
115
n
110
SER
115
A
LEU
116
n
111
LEU
116
A
ILE
117
n
112
ILE
117
A
TYR
118
n
113
TYR
118
A
ASN
119
n
114
ASN
119
A
LYS
120
n
115
LYS
120
A
ASP
121
n
116
ASP
121
A
LEU
122
n
117
LEU
122
A
LEU
123
n
118
LEU
123
A
PRO
124
n
119
PRO
124
A
ASN
125
n
120
ASN
125
A
PRO
126
n
121
PRO
126
A
PRO
127
n
122
PRO
127
A
LYS
128
n
123
LYS
128
A
THR
129
n
124
THR
129
A
TRP
130
n
125
TRP
130
A
GLU
131
n
126
GLU
131
A
GLU
132
n
127
GLU
132
A
ILE
133
n
128
ILE
133
A
PRO
134
n
129
PRO
134
A
ALA
135
n
130
ALA
135
A
LEU
136
n
131
LEU
136
A
ASP
137
n
132
ASP
137
A
LYS
138
n
133
LYS
138
A
GLU
139
n
134
GLU
139
A
LEU
140
n
135
LEU
140
A
LYS
141
n
136
LYS
141
A
ALA
142
n
137
ALA
142
A
LYS
143
n
138
LYS
143
A
GLY
144
n
139
GLY
144
A
LYS
145
n
140
LYS
145
A
SER
146
n
141
SER
146
A
ALA
147
n
142
ALA
147
A
LEU
148
n
143
LEU
148
A
MET
149
n
144
MET
149
A
PHE
150
n
145
PHE
150
A
ASN
151
n
146
ASN
151
A
LEU
152
n
147
LEU
152
A
GLN
153
n
148
GLN
153
A
GLU
154
n
149
GLU
154
A
PRO
155
n
150
PRO
155
A
TYR
156
n
151
TYR
156
A
PHE
157
n
152
PHE
157
A
THR
158
n
153
THR
158
A
TRP
159
n
154
TRP
159
A
PRO
160
n
155
PRO
160
A
LEU
161
n
156
LEU
161
A
ILE
162
n
157
ILE
162
A
ALA
163
n
158
ALA
163
A
ALA
164
n
159
ALA
164
A
ASP
165
n
160
ASP
165
A
GLY
166
n
161
GLY
166
A
GLY
167
n
162
GLY
167
A
TYR
168
n
163
TYR
168
A
ALA
169
n
164
ALA
169
A
PHE
170
n
165
PHE
170
A
LYS
171
n
166
LYS
171
A
TYR
172
n
167
TYR
172
A
GLU
173
n
168
GLU
173
A
ASN
174
n
169
ASN
174
A
GLY
175
n
170
GLY
175
A
LYS
176
n
171
LYS
176
A
TYR
177
n
172
TYR
177
A
ASP
178
n
173
ASP
178
A
ILE
179
n
174
ILE
179
A
LYS
180
n
175
LYS
180
A
ASP
181
n
176
ASP
181
A
VAL
182
n
177
VAL
182
A
GLY
183
n
178
GLY
183
A
VAL
184
n
179
VAL
184
A
ASP
185
n
180
ASP
185
A
ASN
186
n
181
ASN
186
A
ALA
187
n
182
ALA
187
A
GLY
188
n
183
GLY
188
A
ALA
189
n
184
ALA
189
A
LYS
190
n
185
LYS
190
A
ALA
191
n
186
ALA
191
A
GLY
192
n
187
GLY
192
A
LEU
193
n
188
LEU
193
A
THR
194
n
189
THR
194
A
PHE
195
n
190
PHE
195
A
LEU
196
n
191
LEU
196
A
VAL
197
n
192
VAL
197
A
ASP
198
n
193
ASP
198
A
LEU
199
n
194
LEU
199
A
ILE
200
n
195
ILE
200
A
LYS
201
n
196
LYS
201
A
ASN
202
n
197
ASN
202
A
LYS
203
n
198
LYS
203
A
HIS
204
n
199
HIS
204
A
MET
205
n
200
MET
205
A
ASN
206
n
201
ASN
206
A
ALA
207
n
202
ALA
207
A
ASP
208
n
203
ASP
208
A
THR
209
n
204
THR
209
A
ASP
210
n
205
ASP
210
A
TYR
211
n
206
TYR
211
A
SER
212
n
207
SER
212
A
ILE
213
n
208
ILE
213
A
ALA
214
n
209
ALA
214
A
GLU
215
n
210
GLU
215
A
ALA
216
n
211
ALA
216
A
ALA
217
n
212
ALA
217
A
PHE
218
n
213
PHE
218
A
ASN
219
n
214
ASN
219
A
LYS
220
n
215
LYS
220
A
GLY
221
n
216
GLY
221
A
GLU
222
n
217
GLU
222
A
THR
223
n
218
THR
223
A
ALA
224
n
219
ALA
224
A
MET
225
n
220
MET
225
A
THR
226
n
221
THR
226
A
ILE
227
n
222
ILE
227
A
ASN
228
n
223
ASN
228
A
GLY
229
n
224
GLY
229
A
PRO
230
n
225
PRO
230
A
TRP
231
n
226
TRP
231
A
ALA
232
n
227
ALA
232
A
TRP
233
n
228
TRP
233
A
SER
234
n
229
SER
234
A
ASN
235
n
230
ASN
235
A
ILE
236
n
231
ILE
236
A
ASP
237
n
232
ASP
237
A
THR
238
n
233
THR
238
A
SER
239
n
234
SER
239
A
LYS
240
n
235
LYS
240
A
VAL
241
n
236
VAL
241
A
ASN
242
n
237
ASN
242
A
TYR
243
n
238
TYR
243
A
GLY
244
n
239
GLY
244
A
VAL
245
n
240
VAL
245
A
THR
246
n
241
THR
246
A
VAL
247
n
242
VAL
247
A
LEU
248
n
243
LEU
248
A
PRO
249
n
244
PRO
249
A
THR
250
n
245
THR
250
A
PHE
251
n
246
PHE
251
A
LYS
252
n
247
LYS
252
A
GLY
253
n
248
GLY
253
A
GLN
254
n
249
GLN
254
A
PRO
255
n
250
PRO
255
A
SER
256
n
251
SER
256
A
LYS
257
n
252
LYS
257
A
PRO
258
n
253
PRO
258
A
PHE
259
n
254
PHE
259
A
VAL
260
n
255
VAL
260
A
GLY
261
n
256
GLY
261
A
VAL
262
n
257
VAL
262
A
LEU
263
n
258
LEU
263
A
SER
264
n
259
SER
264
A
ALA
265
n
260
ALA
265
A
GLY
266
n
261
GLY
266
A
ILE
267
n
262
ILE
267
A
ASN
268
n
263
ASN
268
A
ALA
269
n
264
ALA
269
A
ALA
270
n
265
ALA
270
A
SER
271
n
266
SER
271
A
PRO
272
n
267
PRO
272
A
ASN
273
n
268
ASN
273
A
LYS
274
n
269
LYS
274
A
GLU
275
n
270
GLU
275
A
LEU
276
n
271
LEU
276
A
ALA
277
n
272
ALA
277
A
LYS
278
n
273
LYS
278
A
GLU
279
n
274
GLU
279
A
PHE
280
n
275
PHE
280
A
LEU
281
n
276
LEU
281
A
GLU
282
n
277
GLU
282
A
ASN
283
n
278
ASN
283
A
TYR
284
n
279
TYR
284
A
LEU
285
n
280
LEU
285
A
LEU
286
n
281
LEU
286
A
THR
287
n
282
THR
287
A
ASP
288
n
283
ASP
288
A
GLU
289
n
284
GLU
289
A
GLY
290
n
285
GLY
290
A
LEU
291
n
286
LEU
291
A
GLU
292
n
287
GLU
292
A
ALA
293
n
288
ALA
293
A
VAL
294
n
289
VAL
294
A
ASN
295
n
290
ASN
295
A
LYS
296
n
291
LYS
296
A
ASP
297
n
292
ASP
297
A
LYS
298
n
293
LYS
298
A
PRO
299
n
294
PRO
299
A
LEU
300
n
295
LEU
300
A
GLY
301
n
296
GLY
301
A
ALA
302
n
297
ALA
302
A
VAL
303
n
298
VAL
303
A
ALA
304
n
299
ALA
304
A
LEU
305
n
300
LEU
305
A
LYS
306
n
301
LYS
306
A
SER
307
n
302
SER
307
A
TYR
308
n
303
TYR
308
A
GLU
309
n
304
GLU
309
A
GLU
310
n
305
GLU
310
A
GLU
311
n
306
GLU
311
A
LEU
312
n
307
LEU
312
A
ALA
313
n
308
ALA
313
A
LYS
314
n
309
LYS
314
A
ASP
315
n
310
ASP
315
A
PRO
316
n
311
PRO
316
A
ARG
317
n
312
ARG
317
A
ILE
318
n
313
ILE
318
A
ALA
319
n
314
ALA
319
A
ALA
320
n
315
ALA
320
A
THR
321
n
316
THR
321
A
MET
322
n
317
MET
322
A
GLU
323
n
318
GLU
323
A
ASN
324
n
319
ASN
324
A
ALA
325
n
320
ALA
325
A
GLN
326
n
321
GLN
326
A
LYS
327
n
322
LYS
327
A
GLY
328
n
323
GLY
328
A
GLU
329
n
324
GLU
329
A
ILE
330
n
325
ILE
330
A
MET
331
n
326
MET
331
A
PRO
332
n
327
PRO
332
A
ASN
333
n
328
ASN
333
A
ILE
334
n
329
ILE
334
A
PRO
335
n
330
PRO
335
A
GLN
336
n
331
GLN
336
A
MET
337
n
332
MET
337
A
SER
338
n
333
SER
338
A
ALA
339
n
334
ALA
339
A
PHE
340
n
335
PHE
340
A
TRP
341
n
336
TRP
341
A
TYR
342
n
337
TYR
342
A
ALA
343
n
338
ALA
343
A
VAL
344
n
339
VAL
344
A
ARG
345
n
340
ARG
345
A
THR
346
n
341
THR
346
A
ALA
347
n
342
ALA
347
A
VAL
348
n
343
VAL
348
A
ILE
349
n
344
ILE
349
A
ASN
350
n
345
ASN
350
A
ALA
351
n
346
ALA
351
A
ALA
352
n
347
ALA
352
A
SER
353
n
348
SER
353
A
GLY
354
n
349
GLY
354
A
ARG
355
n
350
ARG
355
A
GLN
356
n
351
GLN
356
A
THR
357
n
352
THR
357
A
VAL
358
n
353
VAL
358
A
ASP
359
n
354
ASP
359
A
ALA
360
n
355
ALA
360
A
ALA
361
n
356
ALA
361
A
LEU
362
n
357
LEU
362
A
ALA
363
n
358
ALA
363
A
ALA
364
n
359
ALA
364
A
ALA
365
n
360
ALA
365
A
GLN
366
n
361
GLN
366
A
THR
367
n
362
THR
367
A
ASN
368
n
363
ASN
368
A
ALA
369
n
364
ALA
369
A
ALA
370
n
365
ALA
370
A
ALA
371
n
366
ALA
371
A
MET
372
n
367
MET
372
A
SER
373
n
368
SER
373
A
LEU
374
n
369
LEU
374
A
ALA
375
n
370
ALA
375
A
SER
376
n
371
SER
376
A
GLY
377
n
372
GLY
377
A
LYS
378
n
373
LYS
378
A
SER
379
n
374
SER
379
A
LEU
380
n
375
LEU
380
A
LEU
381
n
376
LEU
381
A
HIS
382
n
377
HIS
382
A
GLU
383
n
378
GLU
383
A
VAL
384
n
379
VAL
384
A
ASP
385
n
380
ASP
385
A
LYS
386
n
381
LYS
386
A
ASP
387
n
382
ASP
387
A
ILE
388
n
383
ILE
388
A
SER
389
n
384
SER
389
A
GLN
390
n
385
GLN
390
A
LEU
391
n
386
LEU
391
A
THR
392
n
387
THR
392
A
GLN
393
n
388
GLN
393
A
ALA
394
n
389
ALA
394
A
ILE
395
n
390
ILE
395
A
VAL
396
n
391
VAL
396
A
LYS
397
n
392
LYS
397
A
ASN
398
n
393
ASN
398
A
HIS
399
n
394
HIS
399
A
LYS
400
n
395
LYS
400
A
ASN
401
n
396
ASN
401
A
LEU
402
n
397
LEU
402
A
LEU
403
n
398
LEU
403
A
LYS
404
n
399
LYS
404
A
ILE
405
n
400
ILE
405
A
ALA
406
n
401
ALA
406
A
GLN
407
n
402
GLN
407
A
TYR
408
n
403
TYR
408
A
ALA
409
n
404
ALA
409
A
ALA
410
n
405
ALA
410
A
GLN
411
n
406
GLN
411
A
ASN
412
n
407
ASN
412
A
ARG
413
n
408
ARG
413
A
ARG
414
n
409
ARG
414
A
GLY
415
n
410
GLY
415
A
LEU
416
n
411
LEU
416
A
ASP
417
n
412
ASP
417
A
LEU
418
n
413
LEU
418
A
LEU
419
n
414
LEU
419
A
PHE
420
n
415
PHE
420
A
TRP
421
n
416
TRP
421
A
GLU
422
n
417
GLU
422
A
GLN
423
n
418
GLN
423
A
GLY
424
n
419
GLY
424
A
GLY
425
n
420
GLY
425
A
LEU
426
n
421
LEU
426
A
CYS
427
n
422
CYS
427
A
LYS
428
n
423
LYS
428
A
ALA
429
n
424
ALA
429
A
LEU
430
n
425
LEU
430
A
GLN
431
n
426
GLN
431
A
GLU
432
n
427
GLU
432
A
GLN
433
n
428
GLN
433
A
CYS
434
n
429
CYS
434
A
CYS
435
n
430
CYS
435
A
PHE
436
n
431
PHE
436
A
LEU
437
n
432
LEU
437
A
ASN
438
n
433
ASN
438
A
ILE
439
n
434
ILE
439
A
THR
440
n
435
THR
440
A
ASN
441
n
436
ASN
441
A
SER
442
n
437
SER
442
A
HIS
443
n
438
HIS
443
A
VAL
444
n
439
VAL
444
A
SER
445
n
440
SER
445
A
ILE
446
n
441
ILE
446
A
LEU
447
n
442
LEU
447
A
GLN
448
n
443
GLN
448
A
GLU
449
n
444
GLU
449
A
ARG
450
n
445
ARG
450
A
PRO
451
n
446
PRO
451
A
PRO
452
n
447
PRO
452
A
LEU
453
n
448
LEU
453
A
GLU
454
n
449
GLU
454
A
ASN
455
n
450
ASN
455
A
author_and_software_defined_assembly
PISA,PQS
3
trimeric
13630
-103
56060
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
-0.8660254038
0.0000000000
0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_555
-y,x-y,z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
3_555
-x+y,-x,z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
A
O
ILE
10
A
O
ILE
5
A
N
THR
37
A
N
THR
32
A
O
ILE
61
A
O
ILE
56
A
N
GLY
266
A
N
GLY
261
A
O
GLY
261
A
O
GLY
256
A
N
GLU
112
A
N
GLU
107
A
O
THR
226
A
O
THR
221
A
N
ILE
117
A
N
ILE
112
A
O
LEU
116
A
O
LEU
111
A
N
THR
246
A
N
THR
241
1
A
CL
457
C
CL
1
A
CL
458
D
CL
1
A
A
O
N
GLU
GLY
29
33
2.18
1
A
LYS
7
-110.59
-129.77
1
A
LEU
8
171.85
122.24
1
A
GLU
29
-49.38
-77.57
1
A
ASP
31
163.06
5.27
1
A
THR
32
-164.26
-22.22
1
A
ASP
56
-91.25
-151.40
1
A
LYS
84
-32.41
-26.55
1
A
LEU
123
-155.44
77.51
1
A
ALA
169
-64.94
-86.13
1
A
ASP
181
-114.98
77.23
1
A
ASN
186
-117.03
-165.65
1
A
LYS
203
59.11
16.51
1
A
ASP
210
-123.00
-142.91
1
A
TRP
231
-35.51
-31.53
1
A
VAL
247
-48.30
151.42
1
A
ASN
273
-96.65
42.11
1
A
LEU
286
-68.27
39.84
1
A
PRO
299
-35.20
123.21
1
A
VAL
303
-46.67
164.78
1
A
ILE
334
-28.38
134.56
1
A
GLN
336
-79.02
21.00
1
A
ALA
369
-68.80
0.62
1
A
LEU
381
-48.02
-75.96
1
A
ASP
387
-71.62
-73.87
1
A
ARG
450
-2.82
100.03
1
A
GLU
454
-75.19
28.18
PROTEIN_REP.PARAM
TOPHCSDX.PRO
FE.PAR
WATCL.TOP
MAL.PRO
MAL.TOP
65.3
-0.89
0.41
0.00
-0.89
0.00
1.78
BULK SOLVENT MODEL USED
0.305
0.009
0.223
2.50
40.00
1036
15268
15268
6.8
94.6
RANDOM
1000000.00
0.00100
1
RESTRAINED
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
1ANF
0.51
0.39
40.0
0.73
0.61
2.50
40.00
37
3545
25
0
3483
0.006
1.1
26.2
0.61
2.54
1.50
4.05
2.00
3.87
2.00
5.88
2.50
0.451
0.044
0.44
2.59
105
1369
10
7.1
93.0
60.4
2.29
99.
1MG1
19248
0.068
1
9.8
7.8
91
0.364
2.29
2.37
1.2
1
65
data reduction
DENZO
data scaling
SCALEPACK
model building
X-PLOR
refinement
X-PLOR
3.851
phasing
X-PLOR
HTLV-1 GP21 ECTODOMAIN/MALTOSE-BINDING PROTEIN CHIMERA
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
A
TYR
18
A
TYR
13
HELX_P
A
GLU
29
A
GLU
24
1
1
12
A
LEU
44
A
LEU
39
HELX_P
A
THR
54
A
THR
49
1
2
11
A
HIS
65
A
HIS
60
HELX_P
A
GLN
73
A
GLN
68
5
3
9
A
PHE
86
A
PHE
81
HELX_P
A
ASP
88
A
ASP
83
5
4
3
A
PRO
92
A
PRO
87
HELX_P
A
VAL
98
A
VAL
93
1
5
7
A
TRP
130
A
TRP
125
HELX_P
A
LYS
143
A
LYS
138
5
6
14
A
PRO
155
A
PRO
150
HELX_P
A
ALA
164
A
ALA
159
1
7
10
A
ALA
187
A
ALA
182
HELX_P
A
LYS
201
A
LYS
196
1
8
15
A
TYR
211
A
TYR
206
HELX_P
A
ASN
219
A
ASN
214
1
9
9
A
PRO
230
A
PRO
225
HELX_P
A
THR
238
A
THR
233
1
10
9
A
LYS
274
A
LYS
269
HELX_P
A
GLU
282
A
GLU
277
1
11
9
A
ASP
288
A
ASP
283
HELX_P
A
ASN
295
A
ASN
290
1
12
8
A
LYS
306
A
LYS
301
HELX_P
A
GLU
310
A
GLU
305
1
13
5
A
PRO
316
A
PRO
311
HELX_P
A
LYS
327
A
LYS
322
1
14
12
A
PRO
335
A
PRO
330
HELX_P
A
SER
353
A
SER
348
5
15
19
A
VAL
358
A
VAL
353
HELX_P
A
ALA
369
A
ALA
364
1
16
12
A
LEU
374
A
LEU
369
HELX_P
A
LEU
419
A
LEU
414
1
17
46
A
TRP
421
A
TRP
416
HELX_P
A
GLN
423
A
GLN
418
5
18
3
A
GLY
425
A
GLY
420
HELX_P
A
ALA
429
A
ALA
424
1
19
5
A
SER
442
A
SER
437
HELX_P
A
GLU
449
A
GLU
444
1
20
8
disulf
2.025
A
CYS
427
A
SG
CYS
422
1_555
A
CYS
434
A
SG
CYS
429
1_555
covale
1.407
both
sing
B
GLC
1
B
O4
GLC
1_555
B
GLC
2
B
C1
GLC
1_555
VIRAL PROTEIN
HUMAN T CELL LEUKEMIA VIRUS TYPE 1, HTLV-1, ENVELOPE PROTEIN, MEMBRANE FUSION, MALTOSE-BINDING PROTEIN CHIMERA, Viral protein
MALE_ECOLI
UNP
1
P02928
31
387
1MG1
6
362
P02928
A
1
1
357
2
3
3
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
VAL
9
A
VAL
4
A
TRP
11
A
TRP
6
A
THR
37
A
THR
32
A
GLU
39
A
GLU
34
A
ILE
60
A
ILE
55
A
ALA
64
A
ALA
59
A
GLY
261
A
GLY
256
A
ILE
267
A
ILE
262
A
ALA
106
A
ALA
101
A
GLU
112
A
GLU
107
A
MET
225
A
MET
220
A
ASN
228
A
ASN
223
A
SER
115
A
SER
110
A
ASN
119
A
ASN
114
A
TYR
243
A
TYR
238
A
THR
246
A
THR
241
146
trigonal
H 3