1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Kumagai, T. Ohtani, K. Tsuboi, Y. Koike, T. Sugiyama, M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking To be published 0353 Solution structure of the transposon Tn5-encoding bleomycin-binding protein complexed with an activated bleomycin analogue. 10.2210/pdb1mh6/pdb pdb_00001mh6 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 SINGLE WAVELENGTH M 1 1.0 13953.740 BLEOMYCIN RESISTANCE PROTEIN 2 man polymer BLMT no no TDQATPNLPSRDFDSTAAFYERLGFGIVFRDAGWMILQRGDLMLEFFAHPGLDPLASWFSCCLRLDDLAEFYRQCKSVGI QETSSGYPRIHAPELQEWGGTMAALVDPDGTLLRLIQNELLAGIS TDQATPNLPSRDFDSTAAFYERLGFGIVFRDAGWMILQRGDLMLEFFAHPGLDPLASWFSCCLRLDDLAEFYRQCKSVGI QETSSGYPRIHAPELQEWGGTMAALVDPDGTLLRLIQNELLAGIS A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Klebsiella Escherichia sample 573 Klebsiella pneumoniae 562 Escherichia coli PLASMID pKKtrp database_2 pdbx_nmr_software pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 2003-02-19 1 1 2008-04-28 1 2 2011-07-13 1 3 2022-02-23 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name RCSB Y PDBJ 2002-08-19 REL 1 2D NOESY 2D TOCSY HMBC 0.20 7.4 ambient 308 K 1 minimized average structure data analysis Discover 2000 refinement Discover 2000 500 JEOL ECP THR 202 n 1 THR 202 A ASP 203 n 2 ASP 203 A GLN 204 n 3 GLN 204 A ALA 205 n 4 ALA 205 A THR 206 n 5 THR 206 A PRO 207 n 6 PRO 207 A ASN 208 n 7 ASN 208 A LEU 209 n 8 LEU 209 A PRO 210 n 9 PRO 210 A SER 211 n 10 SER 211 A ARG 212 n 11 ARG 212 A ASP 213 n 12 ASP 213 A PHE 214 n 13 PHE 214 A ASP 215 n 14 ASP 215 A SER 216 n 15 SER 216 A THR 217 n 16 THR 217 A ALA 218 n 17 ALA 218 A ALA 219 n 18 ALA 219 A PHE 220 n 19 PHE 220 A TYR 221 n 20 TYR 221 A GLU 222 n 21 GLU 222 A ARG 223 n 22 ARG 223 A LEU 224 n 23 LEU 224 A GLY 225 n 24 GLY 225 A PHE 226 n 25 PHE 226 A GLY 227 n 26 GLY 227 A ILE 228 n 27 ILE 228 A VAL 229 n 28 VAL 229 A PHE 230 n 29 PHE 230 A ARG 231 n 30 ARG 231 A ASP 232 n 31 ASP 232 A ALA 233 n 32 ALA 233 A GLY 234 n 33 GLY 234 A TRP 235 n 34 TRP 235 A MET 236 n 35 MET 236 A ILE 237 n 36 ILE 237 A LEU 238 n 37 LEU 238 A GLN 239 n 38 GLN 239 A ARG 240 n 39 ARG 240 A GLY 241 n 40 GLY 241 A ASP 242 n 41 ASP 242 A LEU 243 n 42 LEU 243 A MET 244 n 43 MET 244 A LEU 245 n 44 LEU 245 A GLU 246 n 45 GLU 246 A PHE 247 n 46 PHE 247 A PHE 248 n 47 PHE 248 A ALA 249 n 48 ALA 249 A HIS 250 n 49 HIS 250 A PRO 251 n 50 PRO 251 A GLY 252 n 51 GLY 252 A LEU 253 n 52 LEU 253 A ASP 254 n 53 ASP 254 A PRO 255 n 54 PRO 255 A LEU 256 n 55 LEU 256 A ALA 257 n 56 ALA 257 A SER 258 n 57 SER 258 A TRP 259 n 58 TRP 259 A PHE 260 n 59 PHE 260 A SER 261 n 60 SER 261 A CYS 262 n 61 CYS 262 A CYS 263 n 62 CYS 263 A LEU 264 n 63 LEU 264 A ARG 265 n 64 ARG 265 A LEU 266 n 65 LEU 266 A ASP 267 n 66 ASP 267 A ASP 268 n 67 ASP 268 A LEU 269 n 68 LEU 269 A ALA 270 n 69 ALA 270 A GLU 271 n 70 GLU 271 A PHE 272 n 71 PHE 272 A TYR 273 n 72 TYR 273 A ARG 274 n 73 ARG 274 A GLN 275 n 74 GLN 275 A CYS 276 n 75 CYS 276 A LYS 277 n 76 LYS 277 A SER 278 n 77 SER 278 A VAL 279 n 78 VAL 279 A GLY 280 n 79 GLY 280 A ILE 281 n 80 ILE 281 A GLN 282 n 81 GLN 282 A GLU 283 n 82 GLU 283 A THR 284 n 83 THR 284 A SER 285 n 84 SER 285 A SER 286 n 85 SER 286 A GLY 287 n 86 GLY 287 A TYR 288 n 87 TYR 288 A PRO 289 n 88 PRO 289 A ARG 290 n 89 ARG 290 A ILE 291 n 90 ILE 291 A HIS 292 n 91 HIS 292 A ALA 293 n 92 ALA 293 A PRO 294 n 93 PRO 294 A GLU 295 n 94 GLU 295 A LEU 296 n 95 LEU 296 A GLN 297 n 96 GLN 297 A GLY 298 n 97 GLU 298 A TRP 299 n 98 TRP 299 A GLY 300 n 99 GLY 300 A GLY 301 n 100 GLY 301 A THR 302 n 101 THR 302 A MET 303 n 102 MET 303 A ALA 304 n 103 ALA 304 A ALA 305 n 104 ALA 305 A LEU 306 n 105 LEU 306 A VAL 307 n 106 VAL 307 A ASP 308 n 107 ASP 308 A PRO 309 n 108 PRO 309 A ASP 310 n 109 ASP 310 A GLY 311 n 110 GLY 311 A THR 312 n 111 THR 312 A LEU 313 n 112 LEU 313 A LEU 314 n 113 LEU 314 A ARG 315 n 114 ARG 315 A LEU 316 n 115 LEU 316 A ILE 317 n 116 ILE 317 A GLN 318 n 117 GLN 318 A ASN 319 n 118 ASN 319 A GLU 320 n 119 GLU 320 A LEU 321 n 120 LEU 321 A LEU 322 n 121 LEU 322 A ALA 323 n 122 ALA 323 A GLY 324 n 123 GLY 324 A ILE 325 n 124 ILE 325 A SER 326 n 125 SER 326 A THR 2 n 1 THR 2 B ASP 3 n 2 ASP 3 B GLN 4 n 3 GLN 4 B ALA 5 n 4 ALA 5 B THR 6 n 5 THR 6 B PRO 7 n 6 PRO 7 B ASN 8 n 7 ASN 8 B LEU 9 n 8 LEU 9 B PRO 10 n 9 PRO 10 B SER 11 n 10 SER 11 B ARG 12 n 11 ARG 12 B ASP 13 n 12 ASP 13 B PHE 14 n 13 PHE 14 B ASP 15 n 14 ASP 15 B SER 16 n 15 SER 16 B THR 17 n 16 THR 17 B ALA 18 n 17 ALA 18 B ALA 19 n 18 ALA 19 B PHE 20 n 19 PHE 20 B TYR 21 n 20 TYR 21 B GLU 22 n 21 GLU 22 B ARG 23 n 22 ARG 23 B LEU 24 n 23 LEU 24 B GLY 25 n 24 GLY 25 B PHE 26 n 25 PHE 26 B GLY 27 n 26 GLY 27 B ILE 28 n 27 ILE 28 B VAL 29 n 28 VAL 29 B PHE 30 n 29 PHE 30 B ARG 31 n 30 ARG 31 B ASP 32 n 31 ASP 32 B ALA 33 n 32 ALA 33 B GLY 34 n 33 GLY 34 B TRP 35 n 34 TRP 35 B MET 36 n 35 MET 36 B ILE 37 n 36 ILE 37 B LEU 38 n 37 LEU 38 B GLN 39 n 38 GLN 39 B ARG 40 n 39 ARG 40 B GLY 41 n 40 GLY 41 B ASP 42 n 41 ASP 42 B LEU 43 n 42 LEU 43 B MET 44 n 43 MET 44 B LEU 45 n 44 LEU 45 B GLU 46 n 45 GLU 46 B PHE 47 n 46 PHE 47 B PHE 48 n 47 PHE 48 B ALA 49 n 48 ALA 49 B HIS 50 n 49 HIS 50 B PRO 51 n 50 PRO 51 B GLY 52 n 51 GLY 52 B LEU 53 n 52 LEU 53 B ASP 54 n 53 ASP 54 B PRO 55 n 54 PRO 55 B LEU 56 n 55 LEU 56 B ALA 57 n 56 ALA 57 B SER 58 n 57 SER 58 B TRP 59 n 58 TRP 59 B PHE 60 n 59 PHE 60 B SER 61 n 60 SER 61 B CYS 62 n 61 CYS 62 B CYS 63 n 62 CYS 63 B LEU 64 n 63 LEU 64 B ARG 65 n 64 ARG 65 B LEU 66 n 65 LEU 66 B ASP 67 n 66 ASP 67 B ASP 68 n 67 ASP 68 B LEU 69 n 68 LEU 69 B ALA 70 n 69 ALA 70 B GLU 71 n 70 GLU 71 B PHE 72 n 71 PHE 72 B TYR 73 n 72 TYR 73 B ARG 74 n 73 ARG 74 B GLN 75 n 74 GLN 75 B CYS 76 n 75 CYS 76 B LYS 77 n 76 LYS 77 B SER 78 n 77 SER 78 B VAL 79 n 78 VAL 79 B GLY 80 n 79 GLY 80 B ILE 81 n 80 ILE 81 B GLN 82 n 81 GLN 82 B GLU 83 n 82 GLU 83 B THR 84 n 83 THR 84 B SER 85 n 84 SER 85 B SER 86 n 85 SER 86 B GLY 87 n 86 GLY 87 B TYR 88 n 87 TYR 88 B PRO 89 n 88 PRO 89 B ARG 90 n 89 ARG 90 B ILE 91 n 90 ILE 91 B HIS 92 n 91 HIS 92 B ALA 93 n 92 ALA 93 B PRO 94 n 93 PRO 94 B GLU 95 n 94 GLU 95 B LEU 96 n 95 LEU 96 B GLN 97 n 96 GLN 97 B GLY 98 n 97 GLU 98 B TRP 99 n 98 TRP 99 B GLY 100 n 99 GLY 100 B GLY 101 n 100 GLY 101 B THR 102 n 101 THR 102 B MET 103 n 102 MET 103 B ALA 104 n 103 ALA 104 B ALA 105 n 104 ALA 105 B LEU 106 n 105 LEU 106 B VAL 107 n 106 VAL 107 B ASP 108 n 107 ASP 108 B PRO 109 n 108 PRO 109 B ASP 110 n 109 ASP 110 B GLY 111 n 110 GLY 111 B THR 112 n 111 THR 112 B LEU 113 n 112 LEU 113 B LEU 114 n 113 LEU 114 B ARG 115 n 114 ARG 115 B LEU 116 n 115 LEU 116 B ILE 117 n 116 ILE 117 B GLN 118 n 117 GLN 118 B ASN 119 n 118 ASN 119 B GLU 120 n 119 GLU 120 B LEU 121 n 120 LEU 121 B LEU 122 n 121 LEU 122 B ALA 123 n 122 ALA 123 B GLY 124 n 123 GLY 124 B ILE 125 n 124 ILE 125 B SER 126 n 125 SER 126 B author_defined_assembly 2 dimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N THR 206 A N THR 5 B O CYS 63 B O CYS 62 B N LEU 66 B N LEU 65 B O ILE 117 B O ILE 116 B O LEU 114 B O LEU 113 B N LEU 106 B N LEU 105 B O VAL 107 B O VAL 106 B N ARG 90 B N ARG 89 A N SER 211 A N SER 10 A O PHE 248 A O PHE 47 A O LEU 245 A O LEU 44 A N LEU 238 A N LEU 37 A O GLN 239 A O GLN 38 A N GLY 227 A N GLY 26 A N ARG 290 A N ARG 89 A O VAL 307 A O VAL 106 A N LEU 306 A N LEU 105 A O LEU 314 A O LEU 113 A O ILE 317 A O ILE 116 A N LEU 266 A N LEU 65 A N CYS 263 A N CYS 62 B O THR 6 B O THR 5 B N SER 11 B N SER 10 B O PHE 48 B O PHE 47 B O LEU 45 B O LEU 44 B N LEU 38 B N LEU 37 B O GLN 39 B O GLN 38 B N GLY 27 B N GLY 26 1 A CB GLU 298 A CB GLU 97 1 Y 1 A CG GLU 298 A CG GLU 97 1 Y 1 A CD GLU 298 A CD GLU 97 1 Y 1 A OE1 GLU 298 A OE1 GLU 97 1 Y 1 A OE2 GLU 298 A OE2 GLU 97 1 Y 1 B CB GLU 98 B CB GLU 97 1 Y 1 B CG GLU 98 B CG GLU 97 1 Y 1 B CD GLU 98 B CD GLU 97 1 Y 1 B OE1 GLU 98 B OE1 GLU 97 1 Y 1 B OE2 GLU 98 B OE2 GLU 97 1 Y 1 A B H O ALA ASP 205 42 1.57 1 A A OD2 HG ASP SER 213 216 1.57 1 B B OD2 HG ASP SER 13 16 1.57 1 A A HH OE2 TYR GLU 273 283 1.58 1 B B HH OE2 TYR GLU 73 83 1.58 1 A A HH OD2 TYR ASP 221 308 1.59 1 B B HH OD2 TYR ASP 21 108 1.59 1 A B C O ASP ASP 242 3 2.09 1 A B O CA ASP ASP 203 42 2.18 1 A B O N ASP ASP 203 42 2.19 1 A A ASP ASP 267 268 147.28 1 B B ASP ASP 67 68 147.34 1 A ARG 223 0.088 SIDE CHAIN 1 B ARG 23 0.088 SIDE CHAIN 1 3.39 0.50 120.30 123.69 A A A NE CZ NH1 ARG ARG ARG 212 212 212 N 1 -4.32 0.70 120.80 116.48 A A A CB CG CD2 PHE PHE PHE 214 214 214 N 1 3.65 0.50 120.30 123.95 A A A NE CZ NH1 ARG ARG ARG 223 223 223 N 1 3.04 0.50 120.30 123.34 A A A NE CZ NH1 ARG ARG ARG 231 231 231 N 1 4.33 0.50 120.30 124.63 A A A NE CZ NH1 ARG ARG ARG 240 240 240 N 1 8.29 1.30 111.50 119.79 A A A ND1 CE1 NE2 HIS HIS HIS 250 250 250 N 1 4.12 0.50 120.30 124.42 A A A NE CZ NH1 ARG ARG ARG 265 265 265 N 1 -3.42 0.50 120.30 116.88 A A A NE CZ NH2 ARG ARG ARG 265 265 265 N 1 4.28 0.50 120.30 124.58 A A A NE CZ NH1 ARG ARG ARG 274 274 274 N 1 3.55 0.50 120.30 123.85 A A A NE CZ NH1 ARG ARG ARG 290 290 290 N 1 9.01 1.30 111.50 120.51 A A A ND1 CE1 NE2 HIS HIS HIS 292 292 292 N 1 3.90 0.50 120.30 124.20 A A A NE CZ NH1 ARG ARG ARG 315 315 315 N 1 3.45 0.50 120.30 123.75 B B B NE CZ NH1 ARG ARG ARG 12 12 12 N 1 -4.32 0.70 120.80 116.48 B B B CB CG CD2 PHE PHE PHE 14 14 14 N 1 3.63 0.50 120.30 123.93 B B B NE CZ NH1 ARG ARG ARG 23 23 23 N 1 3.01 0.50 120.30 123.31 B B B NE CZ NH1 ARG ARG ARG 31 31 31 N 1 4.35 0.50 120.30 124.65 B B B NE CZ NH1 ARG ARG ARG 40 40 40 N 1 8.27 1.30 111.50 119.77 B B B ND1 CE1 NE2 HIS HIS HIS 50 50 50 N 1 4.18 0.50 120.30 124.48 B B B NE CZ NH1 ARG ARG ARG 65 65 65 N 1 -3.43 0.50 120.30 116.87 B B B NE CZ NH2 ARG ARG ARG 65 65 65 N 1 4.25 0.50 120.30 124.55 B B B NE CZ NH1 ARG ARG ARG 74 74 74 N 1 3.59 0.50 120.30 123.89 B B B NE CZ NH1 ARG ARG ARG 90 90 90 N 1 9.05 1.30 111.50 120.55 B B B ND1 CE1 NE2 HIS HIS HIS 92 92 92 N 1 3.94 0.50 120.30 124.24 B B B NE CZ NH1 ARG ARG ARG 115 115 115 N 1 A ASP 203 -60.62 92.42 1 A ASP 232 -112.14 -138.95 1 A ALA 257 -83.18 39.55 1 A PRO 294 -64.35 84.55 1 A TRP 299 -154.90 -44.47 1 A ILE 325 -98.72 -63.84 1 B ASP 3 -60.57 92.42 1 B ASP 32 -112.05 -138.92 1 B ALA 57 -83.19 39.60 1 B PRO 94 -64.33 84.54 1 B TRP 99 -154.92 -44.51 1 B ILE 125 -98.74 -63.81 minimized average Solution Structure of the Transposon Tn5-encoding Bleomycin-binding Protein, BLMT 1 N N 1 N N A ASP 215 A ASP 14 HELX_P A GLU 222 A GLU 21 1 1 8 A ARG 223 A ARG 22 HELX_P A GLY 225 A GLY 24 5 2 3 A ASP 268 A ASP 67 HELX_P A GLY 280 A GLY 79 1 3 13 A GLU 320 A GLU 119 HELX_P A ILE 325 A ILE 124 1 4 6 B ASP 15 B ASP 14 HELX_P B GLU 22 B GLU 21 1 5 8 B ARG 23 B ARG 22 HELX_P B GLY 25 B GLY 24 5 6 3 B ASP 68 B ASP 67 HELX_P B GLY 80 B GLY 79 1 7 13 B GLU 120 B GLU 119 HELX_P B ILE 125 B ILE 124 1 8 6 PROTEIN BINDING Antibiotic resistance, Transposable element, PROTEIN BINDING A TYR 288 A TYR 87 1 A PRO 289 A PRO 88 -2.93 B TYR 88 B TYR 87 1 B PRO 89 B PRO 88 -2.95 BLE_KLEPN UNP 1 2 P13081 TDQATPNLPSRDFDSTAAFYERLGFGIVFRDAGWMILQRGDLMLEFFAHPGLDPLASWFSCCLRLDDLAEFYRQCKSVGI QETSSGYPRIHAPELQEWGGTMAALVDPDGTLLRLIQNELLAGIS 2 126 1MH6 202 326 P13081 A 1 1 125 2 126 1MH6 2 126 P13081 B 1 1 125 5 4 5 4 anti-parallel parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel parallel anti-parallel anti-parallel A GLN 204 A GLN 3 A PRO 207 A PRO 6 B SER 61 B SER 60 B LEU 66 B LEU 65 B LEU 113 B LEU 112 B GLN 118 B GLN 117 B THR 102 B THR 101 B VAL 107 B VAL 106 B ARG 90 B ARG 89 B LEU 96 B LEU 95 A PRO 210 A PRO 9 A SER 211 A SER 10 A LEU 243 A LEU 42 A ALA 249 A ALA 48 A TRP 235 A TRP 34 A ARG 240 A ARG 39 A GLY 227 A GLY 26 A ARG 231 A ARG 30 A ARG 290 A ARG 89 A LEU 296 A LEU 95 A THR 302 A THR 101 A VAL 307 A VAL 106 A LEU 313 A LEU 112 A GLN 318 A GLN 117 A SER 261 A SER 60 A LEU 266 A LEU 65 B GLN 4 B GLN 3 B PRO 7 B PRO 6 B PRO 10 B PRO 9 B SER 11 B SER 10 B LEU 43 B LEU 42 B ALA 49 B ALA 48 B TRP 35 B TRP 34 B ARG 40 B ARG 39 B GLY 27 B GLY 26 B ARG 31 B ARG 30