1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Wu, M. Turner, D.H. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C10 H14 N5 O7 P 347.221 y ADENOSINE-5'-MONOPHOSPHATE RNA linking C9 H14 N3 O8 P 323.197 y CYTIDINE-5'-MONOPHOSPHATE RNA linking C10 H14 N5 O8 P 363.221 y GUANOSINE-5'-MONOPHOSPHATE RNA linking US Biochemistry BICHAW 0033 0006-2960 35 9677 9689 10.1021/bi960133q 8703939 Solution structure of (rGCGGACGC)2 by two-dimensional NMR and the iterative relaxation matrix approach. 1996 10.2210/pdb1mis/pdb pdb_00001mis 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 ANTI-PARALLEL RNA DUPLEX WITH TANDEM G\:A MISMATCHES 2580.617 RNA (5'-R(*GP*CP*GP*GP*AP*CP*GP*C)-3') 2 syn polymer no no GCGGACGC GCGGACGC A,B polyribonucleotide n n n n n n n n 5.599 1 19 A 1 B 16 -4.806 A_G1:C16_B 1 -12.231 -0.670 0.535 -0.268 -3.908 1 19 A 2 B 15 -3.645 A_C2:G15_B 2 -16.533 -0.431 0.404 -0.064 1.461 1 19 A 3 B 14 -6.433 A_G3:C14_B 3 -13.388 -0.638 0.801 -0.359 9.533 8 A 4 B 13 -19.282 A_G4:A13_B 4 -20.517 -1.198 0.040 1.304 -9.910 8 A 5 B 12 -19.191 A_A5:G12_B 5 -20.612 1.223 0.049 1.307 -1.820 1 19 A 6 B 11 -6.776 A_C6:G11_B 6 -14.006 0.647 0.817 -0.376 3.980 1 19 A 7 B 10 -3.511 A_G7:C10_B 7 -14.984 0.444 0.388 -0.050 -4.276 1 19 A 8 B 9 -4.158 A_C8:G9_B 8 -10.376 0.646 0.479 -0.229 2.664 36.540 A A 1 2 16.575 B B 16 15 3.221 10.261 -0.056 -1.605 AA_G1C2:G15C16_BB 1 -0.348 0.562 35.115 -3.861 0.045 2.254 33.232 A A 2 3 12.500 B B 15 14 2.693 7.084 -0.085 -1.804 AA_C2G3:C14G15_BB 2 -3.540 6.247 32.300 -4.064 -0.305 2.883 34.769 A A 3 4 -4.836 B B 14 13 2.946 -2.870 -0.852 -1.913 AA_G3G4:A13C14_BB 3 6.575 -11.078 34.043 -2.807 2.330 2.687 33.555 A A 4 5 19.230 B B 13 12 3.540 10.911 0.006 -2.117 AA_G4A5:G12A13_BB 4 0.019 -0.034 31.780 -5.421 -0.008 2.901 34.700 A A 5 6 -5.200 B B 12 11 2.947 -3.080 0.832 -1.893 AA_A5C6:G11G12_BB 5 -6.439 10.869 33.980 -2.747 -2.287 2.347 32.601 A A 6 7 10.540 B B 11 10 2.709 5.874 0.089 -1.784 AA_C6G7:C10G11_BB 6 3.629 -6.511 31.881 -3.977 0.334 2.649 35.390 A A 7 8 16.466 B B 10 9 3.211 9.884 0.060 -1.632 AA_G7C8:G9C10_BB 7 0.427 -0.711 34.022 -4.016 -0.041 database_2 pdbx_database_status pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Database references Derived calculations Other 1 0 1997-07-07 1 1 2008-03-24 1 2 2011-07-13 1 3 2022-02-23 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site Y BNL 1997-03-26 REL MINIMIZED AVERAGE : STRUCTURE 1 BIOSYM TECHNOLOGIES, INC. refinement DISCOVER, AMBER FORCE FIELD FIELD G 1 n 1 G 1 A C 2 n 2 C 2 A G 3 n 3 G 3 A G 4 n 4 G 4 A A 5 n 5 A 5 A C 6 n 6 C 6 A G 7 n 7 G 7 A C 8 n 8 C 8 A G 9 n 1 G 9 B C 10 n 2 C 10 B G 11 n 3 G 11 B G 12 n 4 G 12 B A 13 n 5 A 13 B C 14 n 6 C 14 B G 15 n 7 G 15 B C 16 n 8 C 16 B author_defined_assembly 2 dimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 refinement AMBER STRUCTURE OF RNA (5'-R(GP*CP*GP*GP*AP*CP*GP*C)-3') ANTI-PARALLEL RNA DUPLEX WITH TANDEM G:A MISMATCHES, NMR, MINIMIZED AVERAGE STRUCTURE 1 N N 1 N N hydrog WATSON-CRICK A G 1 A N1 G 1 1_555 B C 16 B N3 C 8 1_555 hydrog WATSON-CRICK A G 1 A N2 G 1 1_555 B C 16 B O2 C 8 1_555 hydrog WATSON-CRICK A G 1 A O6 G 1 1_555 B C 16 B N4 C 8 1_555 hydrog WATSON-CRICK A C 2 A N3 C 2 1_555 B G 15 B N1 G 7 1_555 hydrog WATSON-CRICK A C 2 A N4 C 2 1_555 B G 15 B O6 G 7 1_555 hydrog WATSON-CRICK A C 2 A O2 C 2 1_555 B G 15 B N2 G 7 1_555 hydrog WATSON-CRICK A G 3 A N1 G 3 1_555 B C 14 B N3 C 6 1_555 hydrog WATSON-CRICK A G 3 A N2 G 3 1_555 B C 14 B O2 C 6 1_555 hydrog WATSON-CRICK A G 3 A O6 G 3 1_555 B C 14 B N4 C 6 1_555 hydrog TYPE_8_PAIR A G 4 A N1 G 4 1_555 B A 13 B N1 A 5 1_555 hydrog TYPE_8_PAIR A G 4 A O6 G 4 1_555 B A 13 B N6 A 5 1_555 hydrog A-G MISPAIR A A 5 A N6 A 5 1_555 B G 11 B O6 G 3 1_555 hydrog TYPE_8_PAIR A A 5 A N1 A 5 1_555 B G 12 B N1 G 4 1_555 hydrog TYPE_8_PAIR A A 5 A N6 A 5 1_555 B G 12 B O6 G 4 1_555 hydrog WATSON-CRICK A C 6 A N3 C 6 1_555 B G 11 B N1 G 3 1_555 hydrog WATSON-CRICK A C 6 A N4 C 6 1_555 B G 11 B O6 G 3 1_555 hydrog WATSON-CRICK A C 6 A O2 C 6 1_555 B G 11 B N2 G 3 1_555 hydrog WATSON-CRICK A G 7 A N1 G 7 1_555 B C 10 B N3 C 2 1_555 hydrog WATSON-CRICK A G 7 A N2 G 7 1_555 B C 10 B O2 C 2 1_555 hydrog WATSON-CRICK A G 7 A O6 G 7 1_555 B C 10 B N4 C 2 1_555 hydrog WATSON-CRICK A C 8 A N3 C 8 1_555 B G 9 B N1 G 1 1_555 hydrog WATSON-CRICK A C 8 A N4 C 8 1_555 B G 9 B O6 G 1 1_555 hydrog WATSON-CRICK A C 8 A O2 C 8 1_555 B G 9 B N2 G 1 1_555 RNA RNA, TANDEM G:A MISMATCH, RIBONUCLEIC ACID 1MIS PDB 1 1MIS 1 8 1MIS 1 8 1MIS A 1 1 8 9 16 1MIS 9 16 1MIS B 1 1 8 1 P 1