0.019272 0.000000 0.003415 0.000000 0.010032 0.000000 0.000000 0.000000 0.015451 0.00000 0.00000 0.00000 Perederina, A. Nevskaya, N. Nikonov, O. Nikulin, A. Dumas, P. Yao, M. Tanaka, I. Garber, M. Gongadze, G. Nikonov, S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 100.05 90.00 51.89 99.60 65.73 C10 H14 N5 O7 P 347.221 y ADENOSINE-5'-MONOPHOSPHATE RNA linking C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C9 H14 N3 O8 P 323.197 y CYTIDINE-5'-MONOPHOSPHATE RNA linking C10 H14 N5 O8 P 363.221 y GUANOSINE-5'-MONOPHOSPHATE RNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking K 1 39.098 POTASSIUM ION non-polymer C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C9 H13 N2 O9 P 324.181 y URIDINE-5'-MONOPHOSPHATE RNA linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK RNA RNARFU 2122 1355-8382 8 1548 1557 12515387 Detailed analysis of RNA-protein interactions within the bacterial ribosomal protein L5/5S rRNA complex 2002 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 MAD M x-ray 1 0.9680 1.0 ID14-1 ESRF 0.9680 SYNCHROTRON ESRF BEAMLINE ID14-1 10847.543 5S rRNA fragment 2 man polymer 21155.387 50S ribosomal protein L5 2 man polymer 24.305 MAGNESIUM ION 4 syn non-polymer 39.098 POTASSIUM ION 2 syn non-polymer 18.015 water 187 nat water no no GGCACCUGACCCCAUGCCGAACUCAGAAGUGCCC GGCACCUGACCCCAUGCCGAACUCAGAAGUGCCC C,D polyribonucleotide no yes MPLDVALKRKYYEEVRPELIRRFGYQNVWEVPRLEKVVINQGLGEAKEDARILEKAAQELALITGQKPAVTRAKKSISNF KLRKGMPIGLRVTLRRDR(MSE)WIFLEKLLNVALPRIRDFRGLNPNSFDGRGNYNLGLREQLIFPEITYDMVDALRG (MSE)DIAVVTTAETDEEARALLELLGFPFRK MPLDVALKRKYYEEVRPELIRRFGYQNVWEVPRLEKVVINQGLGEAKEDARILEKAAQELALITGQKPAVTRAKKSISNF KLRKGMPIGLRVTLRRDRMWIFLEKLLNVALPRIRDFRGLNPNSFDGRGNYNLGLREQLIFPEITYDMVDALRGMDIAVV TTAETDEEARALLELLGFPFRK A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Escherichia sample in vitro transcription 562 Escherichia coli Thermus Escherichia sample 274 Thermus thermophilus 562 Escherichia coli PLASMID 1 2.61 52.91 VAPOR DIFFUSION, HANGING DROP 6.5 sodium cacodylate, magnesium acetate, potassium chlorate, PEG 8000, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K 298.0 sodium cacodylate 1 magnesium acetate 1 potassium chlorate 1 PEG 8000 1 -7.153 1 19 C 26 C 58 -2.286 C_G26:C58_C 1 -4.389 -0.088 -0.138 -0.080 1.283 1 19 C 27 C 57 1.712 C_G27:C57_C 2 -9.158 -0.330 0.135 -0.053 12.936 1 19 C 28 C 56 -3.874 C_C28:G56_C 3 -6.996 -0.057 -0.050 -0.061 4.611 1 20 C 29 C 55 3.638 C_A29:U55_C 4 -2.130 -0.055 -0.072 -0.177 3.231 1 19 C 30 C 54 5.976 C_C30:G54_C 5 -14.581 0.130 -0.718 -0.163 -2.957 1 19 C 31 C 51 4.113 C_C31:G51_C 6 -18.845 0.077 0.128 -0.144 3.385 1 20 C 32 C 50 3.848 C_U32:A50_C 7 -13.779 0.130 0.487 -0.190 -3.611 1 19 C 33 C 49 0.479 C_G33:C49_C 8 -19.232 -0.182 0.308 -0.130 5.100 1 20 C 34 C 48 3.459 C_A34:U48_C 9 -17.630 -0.143 0.465 -0.093 9.140 1 19 C 38 C 44 -0.601 C_C38:G44_C 10 -9.299 -0.072 0.257 -0.189 -25.879 5 C 39 C 46 61.598 C_A39:A46_C 11 -4.337 6.252 -0.253 -0.023 -1.894 C 40 C 45 13.700 C_U40:A45_C 12 22.541 6.947 0.770 -4.290 -4.425 1 19 D 26 D 58 0.863 D_G26:C58_D 13 -10.579 -0.112 0.229 -0.150 1.334 1 19 D 27 D 57 2.392 D_G27:C57_D 14 -5.197 -0.341 0.042 -0.109 5.751 1 19 D 28 D 56 -0.815 D_C28:G56_D 15 -9.272 0.069 0.348 -0.163 -1.938 1 20 D 29 D 55 2.248 D_A29:U55_D 16 0.821 -0.097 -0.195 -0.130 -3.447 1 19 D 30 D 54 3.948 D_C30:G54_D 17 -6.618 0.209 -0.394 -0.137 5.896 1 19 D 31 D 51 1.260 D_C31:G51_D 18 -18.057 0.154 0.500 -0.212 4.424 1 20 D 32 D 50 4.947 D_U32:A50_D 19 -13.237 -0.121 0.183 -0.082 -4.282 1 19 D 33 D 49 -0.947 D_G33:C49_D 20 -18.872 -0.110 0.330 -0.092 1.981 1 20 D 34 D 48 -0.298 D_A34:U48_D 21 -16.365 0.173 0.194 -0.174 2.720 1 19 D 38 D 44 -5.753 D_C38:G44_D 22 -10.230 -0.188 0.463 -0.366 -25.623 5 D 39 D 46 63.000 D_A39:A46_D 23 -0.055 6.315 -0.245 -0.156 -5.325 D 40 D 45 12.600 D_U40:A45_D 24 14.437 6.906 0.901 -4.425 2.811 32.599 C C 26 27 9.063 C C 58 57 3.091 5.064 -0.151 -1.637 CC_G26G27:C57C58_CC 1 -2.367 4.237 32.129 -3.717 -0.105 2.761 33.051 C C 27 28 12.264 C C 57 56 3.097 6.927 -0.704 -1.286 CC_G27C28:G56C57_CC 2 0.386 -0.684 32.334 -3.323 1.297 2.218 34.072 C C 28 29 25.431 C C 56 55 3.404 14.427 0.384 -1.990 CC_C28A29:U55G56_CC 3 -3.614 6.370 30.742 -5.477 -1.176 3.261 34.402 C C 29 30 5.224 C C 55 54 3.347 3.063 0.819 -1.970 CC_A29C30:G54U55_CC 4 7.377 -12.581 33.489 -3.821 -0.206 2.911 57.617 C C 30 31 16.801 C C 54 51 3.397 16.009 2.663 -1.000 CC_C30C31:G51G54_CC 5 -2.673 2.805 55.473 -1.889 -2.905 2.501 31.715 C C 31 32 18.546 C C 51 50 3.108 9.923 0.247 -1.213 CC_C31U32:A50G51_CC 6 -5.411 10.113 29.681 -3.841 -1.335 2.506 29.197 C C 32 33 17.719 C C 50 49 3.196 8.785 0.068 -1.826 CC_U32G33:C49A50_CC 7 2.880 -5.809 27.725 -5.332 0.425 2.840 37.450 C C 33 34 5.879 C C 49 48 2.986 3.769 -0.559 -1.437 CC_G33A34:U48C49_CC 8 -0.542 0.846 37.263 -2.680 0.806 3.088 127.457 C C 34 38 -2.535 C C 48 44 3.162 -4.546 -1.480 3.567 CC_A34C38:G44U48_CC 9 0.596 -0.332 127.411 2.023 0.830 3.017 -20.252 C C 38 39 -9.763 C C 44 46 3.989 2.266 -2.713 -1.105 CC_C38A39:A46G44_CC 10 20.100 86.613 -1.013 1.021 11.110 1.950 34.113 C C 39 40 13.916 C C 46 45 2.889 8.031 -2.583 -1.161 CC_A39U40:A45A46_CC 11 7.223 -12.516 32.406 -2.948 5.275 2.648 30.840 D D 26 27 10.242 D D 58 57 3.060 5.420 -0.765 -2.123 DD_G26G27:C57C58_DD 12 0.107 -0.203 30.371 -4.921 1.456 2.800 34.977 D D 27 28 16.372 D D 57 56 3.221 9.700 -0.351 -1.190 DD_G27C28:G56C57_DD 13 -3.814 6.438 33.434 -3.359 0.042 2.453 30.925 D D 28 29 20.252 D D 56 55 3.347 10.590 0.023 -2.090 DD_C28A29:U55G56_DD 14 -0.543 1.038 29.092 -5.796 -0.139 3.159 36.324 D D 29 30 8.080 D D 55 54 3.390 5.015 0.829 -1.964 DD_A29C30:G54U55_DD 15 3.428 -5.522 35.829 -3.857 -0.848 2.370 54.704 D D 30 31 14.505 D D 54 51 3.196 13.153 2.524 -1.239 DD_C30C31:G51G54_DD 16 -9.842 10.853 52.362 -2.038 -3.264 2.847 31.789 D D 31 32 13.630 D D 51 50 3.223 7.395 0.170 -1.304 DD_C31U32:A50G51_DD 17 2.023 -3.728 30.873 -3.657 0.038 2.290 31.710 D D 32 33 22.519 D D 50 49 3.260 12.012 0.007 -1.990 DD_U32G33:C49A50_DD 18 -0.491 0.920 29.397 -5.593 -0.093 2.993 35.599 D D 33 34 4.669 D D 49 48 3.122 2.851 -0.601 -1.280 DD_G33A34:U48C49_DD 19 1.150 -1.883 35.470 -2.482 1.140 3.243 129.337 D D 34 38 -2.767 D D 48 44 3.307 -5.001 -1.482 3.320 DD_A34C38:G44U48_DD 20 -0.895 0.495 129.283 1.874 0.813 2.780 -19.300 D D 38 39 -8.859 D D 44 46 3.668 1.974 -2.445 -1.205 DD_C38A39:A46G44_DD 21 19.162 86.006 -1.203 1.744 10.677 1.898 33.082 D D 39 40 12.152 D D 46 45 3.016 6.783 -2.542 -1.227 DD_A39U40:A45A46_DD 22 9.267 -16.602 31.077 -3.043 5.679 repository Initial release Version format compliance Version format compliance 1 0 2003-01-21 1 1 2008-04-28 1 2 2011-07-13 RCSB Y RCSB 2002-08-28 REL REL MG MAGNESIUM ION K POTASSIUM ION HOH water MG 3 3 MG MG 203 C K 6 4 K K 206 C MG 4 3 MG MG 204 D K 5 4 K K 205 D MG 2 3 MG MG 202 A MG 1 3 MG MG 201 B WAT 8 5 HOH HOH 207 C WAT 10 5 HOH HOH 208 C WAT 11 5 HOH HOH 209 C WAT 18 5 HOH HOH 210 C WAT 22 5 HOH HOH 211 C WAT 25 5 HOH HOH 212 C WAT 26 5 HOH HOH 213 C WAT 32 5 HOH HOH 214 C WAT 35 5 HOH HOH 215 C WAT 37 5 HOH HOH 216 C WAT 38 5 HOH HOH 217 C WAT 39 5 HOH HOH 218 C WAT 47 5 HOH HOH 219 C WAT 49 5 HOH HOH 220 C WAT 50 5 HOH HOH 221 C WAT 51 5 HOH HOH 222 C WAT 53 5 HOH HOH 223 C WAT 60 5 HOH HOH 224 C WAT 66 5 HOH HOH 225 C WAT 70 5 HOH HOH 226 C WAT 74 5 HOH HOH 227 C WAT 76 5 HOH HOH 228 C WAT 79 5 HOH HOH 229 C WAT 80 5 HOH HOH 230 C WAT 92 5 HOH HOH 231 C WAT 97 5 HOH HOH 232 C WAT 98 5 HOH HOH 233 C WAT 108 5 HOH HOH 234 C WAT 110 5 HOH HOH 235 C WAT 112 5 HOH HOH 236 C WAT 115 5 HOH HOH 237 C WAT 118 5 HOH HOH 238 C WAT 120 5 HOH HOH 239 C WAT 126 5 HOH HOH 240 C WAT 132 5 HOH HOH 241 C WAT 138 5 HOH HOH 242 C WAT 139 5 HOH HOH 243 C WAT 141 5 HOH HOH 244 C WAT 142 5 HOH HOH 245 C WAT 144 5 HOH HOH 246 C WAT 153 5 HOH HOH 247 C WAT 157 5 HOH HOH 248 C WAT 159 5 HOH HOH 249 C WAT 169 5 HOH HOH 250 C WAT 171 5 HOH HOH 251 C WAT 172 5 HOH HOH 252 C WAT 176 5 HOH HOH 253 C WAT 180 5 HOH HOH 254 C WAT 184 5 HOH HOH 255 C WAT 186 5 HOH HOH 256 C WAT 4 5 HOH HOH 206 D WAT 9 5 HOH HOH 207 D WAT 13 5 HOH HOH 208 D WAT 15 5 HOH HOH 209 D WAT 20 5 HOH HOH 210 D WAT 27 5 HOH HOH 211 D WAT 36 5 HOH HOH 212 D WAT 41 5 HOH HOH 213 D WAT 42 5 HOH HOH 214 D WAT 43 5 HOH HOH 215 D WAT 44 5 HOH HOH 216 D WAT 52 5 HOH HOH 217 D WAT 54 5 HOH HOH 218 D WAT 55 5 HOH HOH 219 D WAT 67 5 HOH HOH 220 D WAT 85 5 HOH HOH 221 D WAT 89 5 HOH HOH 222 D WAT 90 5 HOH HOH 223 D WAT 94 5 HOH HOH 224 D WAT 95 5 HOH HOH 225 D WAT 99 5 HOH HOH 226 D WAT 107 5 HOH HOH 227 D WAT 111 5 HOH HOH 228 D WAT 116 5 HOH HOH 229 D WAT 124 5 HOH HOH 230 D WAT 127 5 HOH HOH 231 D WAT 134 5 HOH HOH 232 D WAT 137 5 HOH HOH 233 D WAT 143 5 HOH HOH 234 D WAT 148 5 HOH HOH 235 D WAT 151 5 HOH HOH 236 D WAT 154 5 HOH HOH 237 D WAT 160 5 HOH HOH 238 D WAT 164 5 HOH HOH 239 D WAT 165 5 HOH HOH 240 D WAT 173 5 HOH HOH 241 D WAT 181 5 HOH HOH 242 D WAT 183 5 HOH HOH 243 D WAT 1 5 HOH HOH 203 A WAT 3 5 HOH HOH 204 A WAT 5 5 HOH HOH 205 A WAT 6 5 HOH HOH 206 A WAT 12 5 HOH HOH 207 A WAT 16 5 HOH HOH 208 A WAT 19 5 HOH HOH 209 A WAT 23 5 HOH HOH 210 A WAT 29 5 HOH HOH 211 A WAT 31 5 HOH HOH 212 A WAT 46 5 HOH HOH 213 A WAT 57 5 HOH HOH 214 A WAT 64 5 HOH HOH 215 A WAT 65 5 HOH HOH 216 A WAT 68 5 HOH HOH 217 A WAT 72 5 HOH HOH 218 A WAT 77 5 HOH HOH 219 A WAT 81 5 HOH HOH 220 A WAT 82 5 HOH HOH 221 A WAT 83 5 HOH HOH 222 A WAT 84 5 HOH HOH 223 A WAT 87 5 HOH HOH 224 A WAT 88 5 HOH HOH 225 A WAT 100 5 HOH HOH 226 A WAT 104 5 HOH HOH 227 A WAT 105 5 HOH HOH 228 A WAT 106 5 HOH HOH 229 A WAT 117 5 HOH HOH 230 A WAT 121 5 HOH HOH 231 A WAT 123 5 HOH HOH 232 A WAT 129 5 HOH HOH 233 A WAT 133 5 HOH HOH 234 A WAT 135 5 HOH HOH 235 A WAT 140 5 HOH HOH 236 A WAT 145 5 HOH HOH 237 A WAT 146 5 HOH HOH 238 A WAT 156 5 HOH HOH 239 A WAT 158 5 HOH HOH 240 A WAT 163 5 HOH HOH 241 A WAT 166 5 HOH HOH 242 A WAT 167 5 HOH HOH 243 A WAT 168 5 HOH HOH 244 A WAT 170 5 HOH HOH 245 A WAT 175 5 HOH HOH 246 A WAT 185 5 HOH HOH 247 A WAT 187 5 HOH HOH 248 A WAT 2 5 HOH HOH 202 B WAT 7 5 HOH HOH 203 B WAT 14 5 HOH HOH 204 B WAT 17 5 HOH HOH 205 B WAT 21 5 HOH HOH 206 B WAT 24 5 HOH HOH 207 B WAT 28 5 HOH HOH 208 B WAT 30 5 HOH HOH 209 B WAT 33 5 HOH HOH 210 B WAT 34 5 HOH HOH 211 B WAT 40 5 HOH HOH 212 B WAT 45 5 HOH HOH 213 B WAT 48 5 HOH HOH 214 B WAT 56 5 HOH HOH 215 B WAT 58 5 HOH HOH 216 B WAT 59 5 HOH HOH 217 B WAT 61 5 HOH HOH 218 B WAT 62 5 HOH HOH 219 B WAT 63 5 HOH HOH 220 B WAT 69 5 HOH HOH 221 B WAT 71 5 HOH HOH 222 B WAT 73 5 HOH HOH 223 B WAT 75 5 HOH HOH 224 B WAT 78 5 HOH HOH 225 B WAT 86 5 HOH HOH 226 B WAT 91 5 HOH HOH 227 B WAT 93 5 HOH HOH 228 B WAT 96 5 HOH HOH 229 B WAT 101 5 HOH HOH 230 B WAT 102 5 HOH HOH 231 B WAT 103 5 HOH HOH 232 B WAT 109 5 HOH HOH 233 B WAT 113 5 HOH HOH 234 B WAT 114 5 HOH HOH 235 B WAT 119 5 HOH HOH 236 B WAT 122 5 HOH HOH 237 B WAT 125 5 HOH HOH 238 B WAT 128 5 HOH HOH 239 B WAT 130 5 HOH HOH 240 B WAT 131 5 HOH HOH 241 B WAT 136 5 HOH HOH 242 B WAT 147 5 HOH HOH 243 B WAT 149 5 HOH HOH 244 B WAT 257 5 HOH HOH 245 B WAT 152 5 HOH HOH 246 B WAT 155 5 HOH HOH 247 B WAT 161 5 HOH HOH 248 B WAT 162 5 HOH HOH 249 B WAT 174 5 HOH HOH 250 B WAT 177 5 HOH HOH 251 B WAT 178 5 HOH HOH 252 B WAT 179 5 HOH HOH 253 B WAT 182 5 HOH HOH 254 B G 26 n 1 G 26 C G 27 n 2 G 27 C C 28 n 3 C 28 C A 29 n 4 A 29 C C 30 n 5 C 30 C C 31 n 6 C 31 C U 32 n 7 U 32 C G 33 n 8 G 33 C A 34 n 9 A 34 C C 35 n 10 C 35 C C 36 n 11 C 36 C C 37 n 12 C 37 C C 38 n 13 C 38 C A 39 n 14 A 39 C U 40 n 15 U 40 C G 41 n 16 G 41 C C 42 n 17 C 42 C C 43 n 18 C 43 C G 44 n 19 G 44 C A 45 n 20 A 45 C A 46 n 21 A 46 C C 47 n 22 C 47 C U 48 n 23 U 48 C C 49 n 24 C 49 C A 50 n 25 A 50 C G 51 n 26 G 51 C A 52 n 27 A 52 C A 53 n 28 A 53 C G 54 n 29 G 54 C U 55 n 30 U 55 C G 56 n 31 G 56 C C 57 n 32 C 57 C C 58 n 33 C 58 C C 59 n 34 C 59 C G 26 n 1 G 26 D G 27 n 2 G 27 D C 28 n 3 C 28 D A 29 n 4 A 29 D C 30 n 5 C 30 D C 31 n 6 C 31 D U 32 n 7 U 32 D G 33 n 8 G 33 D A 34 n 9 A 34 D C 35 n 10 C 35 D C 36 n 11 C 36 D C 37 n 12 C 37 D C 38 n 13 C 38 D A 39 n 14 A 39 D U 40 n 15 U 40 D G 41 n 16 G 41 D C 42 n 17 C 42 D C 43 n 18 C 43 D G 44 n 19 G 44 D A 45 n 20 A 45 D A 46 n 21 A 46 D C 47 n 22 C 47 D U 48 n 23 U 48 D C 49 n 24 C 49 D A 50 n 25 A 50 D G 51 n 26 G 51 D A 52 n 27 A 52 D A 53 n 28 A 53 D G 54 n 29 G 54 D U 55 n 30 U 55 D G 56 n 31 G 56 D C 57 n 32 C 57 D C 58 n 33 C 58 D C 59 n 34 C 59 D n 1 1 A n 2 2 A LEU 3 n 3 LEU 3 A ASP 4 n 4 ASP 4 A VAL 5 n 5 VAL 5 A ALA 6 n 6 ALA 6 A LEU 7 n 7 LEU 7 A LYS 8 n 8 LYS 8 A ARG 9 n 9 ARG 9 A LYS 10 n 10 LYS 10 A TYR 11 n 11 TYR 11 A TYR 12 n 12 TYR 12 A GLU 13 n 13 GLU 13 A GLU 14 n 14 GLU 14 A VAL 15 n 15 VAL 15 A ARG 16 n 16 ARG 16 A PRO 17 n 17 PRO 17 A GLU 18 n 18 GLU 18 A LEU 19 n 19 LEU 19 A ILE 20 n 20 ILE 20 A ARG 21 n 21 ARG 21 A ARG 22 n 22 ARG 22 A PHE 23 n 23 PHE 23 A GLY 24 n 24 GLY 24 A TYR 25 n 25 TYR 25 A GLN 26 n 26 GLN 26 A ASN 27 n 27 ASN 27 A VAL 28 n 28 VAL 28 A TRP 29 n 29 TRP 29 A GLU 30 n 30 GLU 30 A VAL 31 n 31 VAL 31 A PRO 32 n 32 PRO 32 A ARG 33 n 33 ARG 33 A LEU 34 n 34 LEU 34 A GLU 35 n 35 GLU 35 A LYS 36 n 36 LYS 36 A VAL 37 n 37 VAL 37 A VAL 38 n 38 VAL 38 A ILE 39 n 39 ILE 39 A ASN 40 n 40 ASN 40 A GLN 41 n 41 GLN 41 A GLY 42 n 42 GLY 42 A LEU 43 n 43 LEU 43 A GLY 44 n 44 GLY 44 A GLU 45 n 45 GLU 45 A ALA 46 n 46 ALA 46 A LYS 47 n 47 LYS 47 A GLU 48 n 48 GLU 48 A ASP 49 n 49 ASP 49 A ALA 50 n 50 ALA 50 A ARG 51 n 51 ARG 51 A ILE 52 n 52 ILE 52 A LEU 53 n 53 LEU 53 A GLU 54 n 54 GLU 54 A LYS 55 n 55 LYS 55 A ALA 56 n 56 ALA 56 A ALA 57 n 57 ALA 57 A GLN 58 n 58 GLN 58 A GLU 59 n 59 GLU 59 A LEU 60 n 60 LEU 60 A ALA 61 n 61 ALA 61 A LEU 62 n 62 LEU 62 A ILE 63 n 63 ILE 63 A THR 64 n 64 THR 64 A GLY 65 n 65 GLY 65 A GLN 66 n 66 GLN 66 A LYS 67 n 67 LYS 67 A PRO 68 n 68 PRO 68 A ALA 69 n 69 ALA 69 A VAL 70 n 70 VAL 70 A THR 71 n 71 THR 71 A ARG 72 n 72 ARG 72 A ALA 73 n 73 ALA 73 A LYS 74 n 74 LYS 74 A LYS 75 n 75 LYS 75 A SER 76 n 76 SER 76 A ILE 77 n 77 ILE 77 A SER 78 n 78 SER 78 A ASN 79 n 79 ASN 79 A PHE 80 n 80 PHE 80 A LYS 81 n 81 LYS 81 A LEU 82 n 82 LEU 82 A ARG 83 n 83 ARG 83 A LYS 84 n 84 LYS 84 A GLY 85 n 85 GLY 85 A MET 86 n 86 MET 86 A PRO 87 n 87 PRO 87 A ILE 88 n 88 ILE 88 A GLY 89 n 89 GLY 89 A LEU 90 n 90 LEU 90 A ARG 91 n 91 ARG 91 A VAL 92 n 92 VAL 92 A THR 93 n 93 THR 93 A LEU 94 n 94 LEU 94 A ARG 95 n 95 ARG 95 A ARG 96 n 96 ARG 96 A ASP 97 n 97 ASP 97 A ARG 98 n 98 ARG 98 A MSE 99 n 99 MSE 99 A TRP 100 n 100 TRP 100 A ILE 101 n 101 ILE 101 A PHE 102 n 102 PHE 102 A LEU 103 n 103 LEU 103 A GLU 104 n 104 GLU 104 A LYS 105 n 105 LYS 105 A LEU 106 n 106 LEU 106 A LEU 107 n 107 LEU 107 A ASN 108 n 108 ASN 108 A VAL 109 n 109 VAL 109 A ALA 110 n 110 ALA 110 A LEU 111 n 111 LEU 111 A PRO 112 n 112 PRO 112 A ARG 113 n 113 ARG 113 A ILE 114 n 114 ILE 114 A ARG 115 n 115 ARG 115 A ASP 116 n 116 ASP 116 A PHE 117 n 117 PHE 117 A ARG 118 n 118 ARG 118 A GLY 119 n 119 GLY 119 A LEU 120 n 120 LEU 120 A ASN 121 n 121 ASN 121 A PRO 122 n 122 PRO 122 A ASN 123 n 123 ASN 123 A SER 124 n 124 SER 124 A PHE 125 n 125 PHE 125 A ASP 126 n 126 ASP 126 A GLY 127 n 127 GLY 127 A ARG 128 n 128 ARG 128 A GLY 129 n 129 GLY 129 A ASN 130 n 130 ASN 130 A TYR 131 n 131 TYR 131 A ASN 132 n 132 ASN 132 A LEU 133 n 133 LEU 133 A GLY 134 n 134 GLY 134 A LEU 135 n 135 LEU 135 A ARG 136 n 136 ARG 136 A GLU 137 n 137 GLU 137 A GLN 138 n 138 GLN 138 A LEU 139 n 139 LEU 139 A ILE 140 n 140 ILE 140 A PHE 141 n 141 PHE 141 A PRO 142 n 142 PRO 142 A GLU 143 n 143 GLU 143 A ILE 144 n 144 ILE 144 A THR 145 n 145 THR 145 A TYR 146 n 146 TYR 146 A ASP 147 n 147 ASP 147 A MET 148 n 148 MET 148 A VAL 149 n 149 VAL 149 A ASP 150 n 150 ASP 150 A ALA 151 n 151 ALA 151 A LEU 152 n 152 LEU 152 A ARG 153 n 153 ARG 153 A GLY 154 n 154 GLY 154 A MSE 155 n 155 MSE 155 A ASP 156 n 156 ASP 156 A ILE 157 n 157 ILE 157 A ALA 158 n 158 ALA 158 A VAL 159 n 159 VAL 159 A VAL 160 n 160 VAL 160 A THR 161 n 161 THR 161 A THR 162 n 162 THR 162 A ALA 163 n 163 ALA 163 A GLU 164 n 164 GLU 164 A THR 165 n 165 THR 165 A ASP 166 n 166 ASP 166 A GLU 167 n 167 GLU 167 A GLU 168 n 168 GLU 168 A ALA 169 n 169 ALA 169 A ARG 170 n 170 ARG 170 A ALA 171 n 171 ALA 171 A LEU 172 n 172 LEU 172 A LEU 173 n 173 LEU 173 A GLU 174 n 174 GLU 174 A LEU 175 n 175 LEU 175 A LEU 176 n 176 LEU 176 A GLY 177 n 177 GLY 177 A PHE 178 n 178 PHE 178 A PRO 179 n 179 PRO 179 A PHE 180 n 180 PHE 180 A ARG 181 n 181 ARG 181 A LYS 182 n 182 LYS 182 A n 1 1 B n 2 2 B n 3 3 B ASP 4 n 4 ASP 4 B VAL 5 n 5 VAL 5 B ALA 6 n 6 ALA 6 B LEU 7 n 7 LEU 7 B LYS 8 n 8 LYS 8 B ARG 9 n 9 ARG 9 B LYS 10 n 10 LYS 10 B TYR 11 n 11 TYR 11 B TYR 12 n 12 TYR 12 B GLU 13 n 13 GLU 13 B GLU 14 n 14 GLU 14 B VAL 15 n 15 VAL 15 B ARG 16 n 16 ARG 16 B PRO 17 n 17 PRO 17 B GLU 18 n 18 GLU 18 B LEU 19 n 19 LEU 19 B ILE 20 n 20 ILE 20 B ARG 21 n 21 ARG 21 B ARG 22 n 22 ARG 22 B PHE 23 n 23 PHE 23 B GLY 24 n 24 GLY 24 B TYR 25 n 25 TYR 25 B GLN 26 n 26 GLN 26 B ASN 27 n 27 ASN 27 B VAL 28 n 28 VAL 28 B TRP 29 n 29 TRP 29 B GLU 30 n 30 GLU 30 B VAL 31 n 31 VAL 31 B PRO 32 n 32 PRO 32 B ARG 33 n 33 ARG 33 B LEU 34 n 34 LEU 34 B GLU 35 n 35 GLU 35 B LYS 36 n 36 LYS 36 B VAL 37 n 37 VAL 37 B VAL 38 n 38 VAL 38 B ILE 39 n 39 ILE 39 B ASN 40 n 40 ASN 40 B GLN 41 n 41 GLN 41 B GLY 42 n 42 GLY 42 B LEU 43 n 43 LEU 43 B GLY 44 n 44 GLY 44 B GLU 45 n 45 GLU 45 B ALA 46 n 46 ALA 46 B LYS 47 n 47 LYS 47 B GLU 48 n 48 GLU 48 B ASP 49 n 49 ASP 49 B ALA 50 n 50 ALA 50 B ARG 51 n 51 ARG 51 B ILE 52 n 52 ILE 52 B LEU 53 n 53 LEU 53 B GLU 54 n 54 GLU 54 B LYS 55 n 55 LYS 55 B ALA 56 n 56 ALA 56 B ALA 57 n 57 ALA 57 B GLN 58 n 58 GLN 58 B GLU 59 n 59 GLU 59 B LEU 60 n 60 LEU 60 B ALA 61 n 61 ALA 61 B LEU 62 n 62 LEU 62 B ILE 63 n 63 ILE 63 B THR 64 n 64 THR 64 B GLY 65 n 65 GLY 65 B GLN 66 n 66 GLN 66 B LYS 67 n 67 LYS 67 B PRO 68 n 68 PRO 68 B ALA 69 n 69 ALA 69 B VAL 70 n 70 VAL 70 B THR 71 n 71 THR 71 B ARG 72 n 72 ARG 72 B ALA 73 n 73 ALA 73 B LYS 74 n 74 LYS 74 B LYS 75 n 75 LYS 75 B SER 76 n 76 SER 76 B ILE 77 n 77 ILE 77 B SER 78 n 78 SER 78 B ASN 79 n 79 ASN 79 B PHE 80 n 80 PHE 80 B LYS 81 n 81 LYS 81 B LEU 82 n 82 LEU 82 B ARG 83 n 83 ARG 83 B LYS 84 n 84 LYS 84 B GLY 85 n 85 GLY 85 B MET 86 n 86 MET 86 B PRO 87 n 87 PRO 87 B ILE 88 n 88 ILE 88 B GLY 89 n 89 GLY 89 B LEU 90 n 90 LEU 90 B ARG 91 n 91 ARG 91 B VAL 92 n 92 VAL 92 B THR 93 n 93 THR 93 B LEU 94 n 94 LEU 94 B ARG 95 n 95 ARG 95 B ARG 96 n 96 ARG 96 B ASP 97 n 97 ASP 97 B ARG 98 n 98 ARG 98 B MSE 99 n 99 MSE 99 B TRP 100 n 100 TRP 100 B ILE 101 n 101 ILE 101 B PHE 102 n 102 PHE 102 B LEU 103 n 103 LEU 103 B GLU 104 n 104 GLU 104 B LYS 105 n 105 LYS 105 B LEU 106 n 106 LEU 106 B LEU 107 n 107 LEU 107 B ASN 108 n 108 ASN 108 B VAL 109 n 109 VAL 109 B ALA 110 n 110 ALA 110 B LEU 111 n 111 LEU 111 B PRO 112 n 112 PRO 112 B ARG 113 n 113 ARG 113 B ILE 114 n 114 ILE 114 B ARG 115 n 115 ARG 115 B ASP 116 n 116 ASP 116 B PHE 117 n 117 PHE 117 B ARG 118 n 118 ARG 118 B GLY 119 n 119 GLY 119 B LEU 120 n 120 LEU 120 B ASN 121 n 121 ASN 121 B PRO 122 n 122 PRO 122 B ASN 123 n 123 ASN 123 B SER 124 n 124 SER 124 B PHE 125 n 125 PHE 125 B ASP 126 n 126 ASP 126 B GLY 127 n 127 GLY 127 B ARG 128 n 128 ARG 128 B GLY 129 n 129 GLY 129 B ASN 130 n 130 ASN 130 B TYR 131 n 131 TYR 131 B ASN 132 n 132 ASN 132 B LEU 133 n 133 LEU 133 B GLY 134 n 134 GLY 134 B LEU 135 n 135 LEU 135 B ARG 136 n 136 ARG 136 B GLU 137 n 137 GLU 137 B GLN 138 n 138 GLN 138 B LEU 139 n 139 LEU 139 B ILE 140 n 140 ILE 140 B PHE 141 n 141 PHE 141 B PRO 142 n 142 PRO 142 B GLU 143 n 143 GLU 143 B ILE 144 n 144 ILE 144 B THR 145 n 145 THR 145 B TYR 146 n 146 TYR 146 B ASP 147 n 147 ASP 147 B MET 148 n 148 MET 148 B VAL 149 n 149 VAL 149 B ASP 150 n 150 ASP 150 B ALA 151 n 151 ALA 151 B LEU 152 n 152 LEU 152 B ARG 153 n 153 ARG 153 B GLY 154 n 154 GLY 154 B MSE 155 n 155 MSE 155 B ASP 156 n 156 ASP 156 B ILE 157 n 157 ILE 157 B ALA 158 n 158 ALA 158 B VAL 159 n 159 VAL 159 B VAL 160 n 160 VAL 160 B THR 161 n 161 THR 161 B THR 162 n 162 THR 162 B ALA 163 n 163 ALA 163 B GLU 164 n 164 GLU 164 B THR 165 n 165 THR 165 B ASP 166 n 166 ASP 166 B GLU 167 n 167 GLU 167 B GLU 168 n 168 GLU 168 B ALA 169 n 169 ALA 169 B ARG 170 n 170 ARG 170 B ALA 171 n 171 ALA 171 B LEU 172 n 172 LEU 172 B LEU 173 n 173 LEU 173 B GLU 174 n 174 GLU 174 B LEU 175 n 175 LEU 175 B LEU 176 n 176 LEU 176 B GLY 177 n 177 GLY 177 B PHE 178 n 178 PHE 178 B PRO 179 n 179 PRO 179 B PHE 180 n 180 PHE 180 B ARG 181 n 181 ARG 181 B LYS 182 n 182 LYS 182 B author_defined_assembly 4 tetrameric A THR 161 C O THR 161 1_555 A MG 202 I MG MG 1_555 A ALA 163 C O ALA 163 1_555 100.6 A THR 161 C O THR 161 1_555 A MG 202 I MG MG 1_555 A ASN 130 C OD1 ASN 130 1_555 78.0 A ALA 163 C O ALA 163 1_555 A MG 202 I MG MG 1_555 A ASN 130 C OD1 ASN 130 1_555 142.2 A THR 161 C O THR 161 1_555 A MG 202 I MG MG 1_555 C HOH 211 K O HOH 1_555 110.9 A ALA 163 C O ALA 163 1_555 A MG 202 I MG MG 1_555 C HOH 211 K O HOH 1_555 128.8 A ASN 130 C OD1 ASN 130 1_555 A MG 202 I MG MG 1_555 C HOH 211 K O HOH 1_555 84.9 A THR 161 C O THR 161 1_555 A MG 202 I MG MG 1_555 A ARG 128 C O ARG 128 1_555 167.5 A ALA 163 C O ALA 163 1_555 A MG 202 I MG MG 1_555 A ARG 128 C O ARG 128 1_555 80.1 A ASN 130 C OD1 ASN 130 1_555 A MG 202 I MG MG 1_555 A ARG 128 C O ARG 128 1_555 93.8 C HOH 211 K O HOH 1_555 A MG 202 I MG MG 1_555 A ARG 128 C O ARG 128 1_555 77.3 B ASN 130 D OD1 ASN 130 1_555 B MG 201 J MG MG 1_555 B THR 161 D O THR 161 1_555 79.7 B ASN 130 D OD1 ASN 130 1_555 B MG 201 J MG MG 1_555 B ALA 163 D O ALA 163 1_555 132.7 B THR 161 D O THR 161 1_555 B MG 201 J MG MG 1_555 B ALA 163 D O ALA 163 1_555 101.3 B ASN 130 D OD1 ASN 130 1_555 B MG 201 J MG MG 1_555 B HOH 219 N O HOH 1_555 81.1 B THR 161 D O THR 161 1_555 B MG 201 J MG MG 1_555 B HOH 219 N O HOH 1_555 108.7 B ALA 163 D O ALA 163 1_555 B MG 201 J MG MG 1_555 B HOH 219 N O HOH 1_555 138.8 B ASN 130 D OD1 ASN 130 1_555 B MG 201 J MG MG 1_555 B ARG 128 D O ARG 128 1_555 101.3 B THR 161 D O THR 161 1_555 B MG 201 J MG MG 1_555 B ARG 128 D O ARG 128 1_555 165.3 B ALA 163 D O ALA 163 1_555 B MG 201 J MG MG 1_555 B ARG 128 D O ARG 128 1_555 67.1 B HOH 219 N O HOH 1_555 B MG 201 J MG MG 1_555 B ARG 128 D O ARG 128 1_555 85.9 C U 48 A O4' U 23 1_555 C MG 203 E MG MG 1_555 C C 47 A O2 C 22 1_555 93.4 C U 48 A O4' U 23 1_555 C MG 203 E MG MG 1_555 C C 38 A O2' C 13 1_555 104.5 C C 47 A O2 C 22 1_555 C MG 203 E MG MG 1_555 C C 38 A O2' C 13 1_555 146.0 D A 39 B O4' A 14 1_555 D MG 204 G MG MG 1_555 D C 47 B O2 C 22 1_555 73.5 D A 39 B O4' A 14 1_555 D MG 204 G MG MG 1_555 D U 48 B O4' U 23 1_555 137.3 D C 47 B O2 C 22 1_555 D MG 204 G MG MG 1_555 D U 48 B O4' U 23 1_555 83.9 D A 39 B O4' A 14 1_555 D MG 204 G MG MG 1_555 D C 38 B O2' C 13 1_555 78.6 D C 47 B O2 C 22 1_555 D MG 204 G MG MG 1_555 D C 38 B O2' C 13 1_555 143.4 D U 48 B O4' U 23 1_555 D MG 204 G MG MG 1_555 D C 38 B O2' C 13 1_555 101.7 D HOH 221 L O HOH 1_555 D K 205 H K K 1_555 D U 32 B O4 U 7 1_555 171.4 A MSE 99 SELENOMETHIONINE C MSE 99 MET A MSE 155 SELENOMETHIONINE C MSE 155 MET B MSE 99 SELENOMETHIONINE D MSE 99 MET B MSE 155 SELENOMETHIONINE D MSE 155 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ALA 69 C N ALA 69 A O ARG 91 C O ARG 91 A O LEU 94 C O LEU 94 A N VAL 37 C N VAL 37 A N ASN 40 C N ASN 40 A O ASP 156 C O ASP 156 A O ILE 157 C O ILE 157 A N LEU 133 C N LEU 133 A N LEU 139 C N LEU 139 A O TYR 146 C O TYR 146 B N THR 71 D N THR 71 B O ILE 88 D O ILE 88 B O LEU 94 D O LEU 94 B N VAL 37 D N VAL 37 B N ASN 40 D N ASN 40 B O ASP 156 D O ASP 156 B O ILE 157 D O ILE 157 B N LEU 133 D N LEU 133 1 A MET 1 C MET 1 1 Y 1 A PRO 2 C PRO 2 1 Y 1 B MET 1 D MET 1 1 Y 1 B PRO 2 D PRO 2 1 Y 1 B LEU 3 D LEU 3 1 Y 1 A GLU 14 -109.05 -62.07 1 A GLU 45 51.94 13.82 1 A LYS 74 -70.17 -106.35 1 A SER 78 -25.36 118.16 1 A ASN 79 -101.46 78.62 1 A LYS 81 158.29 -59.62 1 A ARG 83 -133.15 -75.31 1 A MET 86 -163.57 -58.25 1 A ARG 96 51.38 -139.26 1 A ARG 113 -70.84 35.05 1 A GLU 143 -62.95 -92.37 1 A ILE 144 -118.96 -166.79 1 A ALA 151 -71.21 -73.25 1 A ARG 153 -84.51 -154.73 1 B ASP 49 177.80 170.79 1 B ALA 50 -147.85 43.84 1 B ARG 51 -147.59 -34.75 1 B LYS 74 -36.51 134.48 1 B SER 76 -155.02 64.93 1 B SER 78 -77.92 -109.11 1 B LYS 81 -52.28 101.16 1 B LEU 82 -142.39 54.27 1 B ARG 83 68.81 172.18 1 B ARG 96 50.40 -147.91 1 B VAL 109 -142.39 -56.14 1 B PHE 117 -39.26 128.06 1 B SER 124 -61.13 28.03 1 B ARG 136 -53.64 -83.36 1 B LEU 139 100.99 14.71 1 B ILE 144 -53.32 103.63 1 B MET 148 161.89 24.00 1 B ARG 153 -89.85 -130.52 PROTEIN_REP.PARAM PROTEIN.TOP DNA-RNA_REP.PARAM DNA-RNA.TOP WATER_REP.PARAM WATER.TOP ION.PARAM ION.TOP 39.4 7.03 0.00 3.40 -3.38 0.00 -3.65 0.288 0.006 0.21 0.21 2.50 14.91 2146 21650 21043 9.9 95.3 RANDOM 1 RESTRAINED THROUGHOUT 2 MAD Engh & Huber FLAT MODEL 52.9597 0.324816 0.44 0.44 2.50 14.91 187 4553 6 1434 2926 0.007 1.3 20.7 1.39 1.70 1.50 3.10 2.00 1.90 2.00 3.13 2.50 0.365 0.020 0.309 2.66 339 2883 6 10.5 85.3 39.3 2.5 15 1MJI 22650 22650 0 0 0.067 1 13.2 3 99.1 0.186 2.5 2.59 3.3 1908 3 84.1 data reduction DENZO data scaling SCALEPACK refinement CNS phasing CNS 50S ribosomal protein L5/RNA Complex DETAILED ANALYSIS OF RNA-PROTEIN INTERACTIONS WITHIN THE BACTERIAL RIBOSOMAL PROTEIN L5/5S RRNA COMPLEX 1 N N 1 N N 2 N N 2 N N 3 N N 4 N N 3 N N 4 N N 3 N N 3 N N 5 N N 5 N N 5 N N 5 N N A VAL 5 C VAL 5 HELX_P A GLU 14 C GLU 14 1 1 10 A GLU 14 C GLU 14 HELX_P A PHE 23 C PHE 23 1 2 10 A ASN 27 C ASN 27 HELX_P A VAL 31 C VAL 31 5 3 5 A ASP 49 C ASP 49 HELX_P A GLY 65 C GLY 65 1 4 17 A ARG 95 C ARG 95 HELX_P A VAL 109 C VAL 109 1 5 15 A THR 165 C THR 165 HELX_P A GLY 177 C GLY 177 1 6 13 B VAL 5 D VAL 5 HELX_P B GLU 14 D GLU 14 1 7 10 B GLU 14 D GLU 14 HELX_P B GLY 24 D GLY 24 1 8 11 B ARG 51 D ARG 51 HELX_P B GLY 65 D GLY 65 1 9 15 B ARG 95 D ARG 95 HELX_P B VAL 109 D VAL 109 1 10 15 B THR 165 D THR 165 HELX_P B GLY 177 D GLY 177 1 11 13 covale 1.330 A ARG 98 C C ARG 98 1_555 A MSE 99 C N MSE 99 1_555 covale 1.331 A MSE 99 C C MSE 99 1_555 A TRP 100 C N TRP 100 1_555 covale 1.333 A GLY 154 C C GLY 154 1_555 A MSE 155 C N MSE 155 1_555 covale 1.320 A MSE 155 C C MSE 155 1_555 A ASP 156 C N ASP 156 1_555 metalc 2.623 A MG 202 I MG MG 1_555 A THR 161 C O THR 161 1_555 metalc 2.813 A MG 202 I MG MG 1_555 A ALA 163 C O ALA 163 1_555 metalc 2.940 A MG 202 I MG MG 1_555 A ASN 130 C OD1 ASN 130 1_555 metalc 3.044 A MG 202 I MG MG 1_555 C HOH 211 K O HOH 1_555 metalc 2.744 A MG 202 I MG MG 1_555 A ARG 128 C O ARG 128 1_555 covale 1.328 B ARG 98 D C ARG 98 1_555 B MSE 99 D N MSE 99 1_555 covale 1.330 B MSE 99 D C MSE 99 1_555 B TRP 100 D N TRP 100 1_555 covale 1.335 B GLY 154 D C GLY 154 1_555 B MSE 155 D N MSE 155 1_555 covale 1.341 B MSE 155 D C MSE 155 1_555 B ASP 156 D N ASP 156 1_555 metalc 2.958 B MG 201 J MG MG 1_555 B ASN 130 D OD1 ASN 130 1_555 metalc 2.535 B MG 201 J MG MG 1_555 B THR 161 D O THR 161 1_555 metalc 2.715 B MG 201 J MG MG 1_555 B ALA 163 D O ALA 163 1_555 metalc 2.426 B MG 201 J MG MG 1_555 B HOH 219 N O HOH 1_555 metalc 2.674 B MG 201 J MG MG 1_555 B ARG 128 D O ARG 128 1_555 metalc 2.779 C MG 203 E MG MG 1_555 C U 48 A O4' U 23 1_555 metalc 2.410 C MG 203 E MG MG 1_555 C C 47 A O2 C 22 1_555 metalc 2.920 C MG 203 E MG MG 1_555 C C 38 A O2' C 13 1_555 metalc 3.342 C K 206 F K K 1_555 C HOH 221 K O HOH 1_555 metalc 3.095 D MG 204 G MG MG 1_555 D A 39 B O4' A 14 1_555 metalc 2.829 D MG 204 G MG MG 1_555 D C 47 B O2 C 22 1_555 metalc 3.033 D MG 204 G MG MG 1_555 D U 48 B O4' U 23 1_555 metalc 2.499 D MG 204 G MG MG 1_555 D C 38 B O2' C 13 1_555 metalc 2.348 D K 205 H K K 1_555 D HOH 221 L O HOH 1_555 metalc 3.390 D K 205 H K K 1_555 D U 32 B O4 U 7 1_555 hydrog WATSON-CRICK C G 26 A N1 G 1 1_555 C C 58 A N3 C 33 1_555 hydrog WATSON-CRICK C G 26 A N2 G 1 1_555 C C 58 A O2 C 33 1_555 hydrog WATSON-CRICK C G 26 A O6 G 1 1_555 C C 58 A N4 C 33 1_555 hydrog WATSON-CRICK C G 27 A N1 G 2 1_555 C C 57 A N3 C 32 1_555 hydrog WATSON-CRICK C G 27 A N2 G 2 1_555 C C 57 A O2 C 32 1_555 hydrog WATSON-CRICK C G 27 A O6 G 2 1_555 C C 57 A N4 C 32 1_555 hydrog WATSON-CRICK C C 28 A N3 C 3 1_555 C G 56 A N1 G 31 1_555 hydrog WATSON-CRICK C C 28 A N4 C 3 1_555 C G 56 A O6 G 31 1_555 hydrog WATSON-CRICK C C 28 A O2 C 3 1_555 C G 56 A N2 G 31 1_555 hydrog WATSON-CRICK C A 29 A N1 A 4 1_555 C U 55 A N3 U 30 1_555 hydrog WATSON-CRICK C A 29 A N6 A 4 1_555 C U 55 A O4 U 30 1_555 hydrog WATSON-CRICK C C 30 A N3 C 5 1_555 C G 54 A N1 G 29 1_555 hydrog WATSON-CRICK C C 30 A N4 C 5 1_555 C G 54 A O6 G 29 1_555 hydrog WATSON-CRICK C C 30 A O2 C 5 1_555 C G 54 A N2 G 29 1_555 hydrog WATSON-CRICK C C 31 A N3 C 6 1_555 C G 51 A N1 G 26 1_555 hydrog WATSON-CRICK C C 31 A N4 C 6 1_555 C G 51 A O6 G 26 1_555 hydrog WATSON-CRICK C C 31 A O2 C 6 1_555 C G 51 A N2 G 26 1_555 hydrog WATSON-CRICK C U 32 A N3 U 7 1_555 C A 50 A N1 A 25 1_555 hydrog WATSON-CRICK C U 32 A O4 U 7 1_555 C A 50 A N6 A 25 1_555 hydrog WATSON-CRICK C G 33 A N1 G 8 1_555 C C 49 A N3 C 24 1_555 hydrog WATSON-CRICK C G 33 A N2 G 8 1_555 C C 49 A O2 C 24 1_555 hydrog WATSON-CRICK C G 33 A O6 G 8 1_555 C C 49 A N4 C 24 1_555 hydrog WATSON-CRICK C A 34 A N1 A 9 1_555 C U 48 A N3 U 23 1_555 hydrog WATSON-CRICK C A 34 A N6 A 9 1_555 C U 48 A O4 U 23 1_555 hydrog C-C MISPAIR C C 36 A N4 C 11 1_555 C C 49 A O2 C 24 1_555 hydrog C-U MISPAIR C C 37 A N4 C 12 1_555 C U 48 A O2 U 23 1_555 hydrog WATSON-CRICK C C 38 A N3 C 13 1_555 C G 44 A N1 G 19 1_555 hydrog WATSON-CRICK C C 38 A N4 C 13 1_555 C G 44 A O6 G 19 1_555 hydrog WATSON-CRICK C C 38 A O2 C 13 1_555 C G 44 A N2 G 19 1_555 hydrog A-A MISPAIR C A 39 A N3 A 14 1_555 C A 46 A N6 A 21 1_555 hydrog U-A PAIR C U 40 A O2 U 15 1_555 C A 45 A N6 A 20 1_555 hydrog G-C PAIR C G 44 A N2 G 19 1_555 C C 47 A N3 C 22 1_555 hydrog WATSON-CRICK D G 26 B N1 G 1 1_555 D C 58 B N3 C 33 1_555 hydrog WATSON-CRICK D G 26 B N2 G 1 1_555 D C 58 B O2 C 33 1_555 hydrog WATSON-CRICK D G 26 B O6 G 1 1_555 D C 58 B N4 C 33 1_555 hydrog WATSON-CRICK D G 27 B N1 G 2 1_555 D C 57 B N3 C 32 1_555 hydrog WATSON-CRICK D G 27 B N2 G 2 1_555 D C 57 B O2 C 32 1_555 hydrog WATSON-CRICK D G 27 B O6 G 2 1_555 D C 57 B N4 C 32 1_555 hydrog WATSON-CRICK D C 28 B N3 C 3 1_555 D G 56 B N1 G 31 1_555 hydrog WATSON-CRICK D C 28 B N4 C 3 1_555 D G 56 B O6 G 31 1_555 hydrog WATSON-CRICK D C 28 B O2 C 3 1_555 D G 56 B N2 G 31 1_555 hydrog WATSON-CRICK D A 29 B N1 A 4 1_555 D U 55 B N3 U 30 1_555 hydrog WATSON-CRICK D A 29 B N6 A 4 1_555 D U 55 B O4 U 30 1_555 hydrog WATSON-CRICK D C 30 B N3 C 5 1_555 D G 54 B N1 G 29 1_555 hydrog WATSON-CRICK D C 30 B N4 C 5 1_555 D G 54 B O6 G 29 1_555 hydrog WATSON-CRICK D C 30 B O2 C 5 1_555 D G 54 B N2 G 29 1_555 hydrog WATSON-CRICK D C 31 B N3 C 6 1_555 D G 51 B N1 G 26 1_555 hydrog WATSON-CRICK D C 31 B N4 C 6 1_555 D G 51 B O6 G 26 1_555 hydrog WATSON-CRICK D C 31 B O2 C 6 1_555 D G 51 B N2 G 26 1_555 hydrog WATSON-CRICK D U 32 B N3 U 7 1_555 D A 50 B N1 A 25 1_555 hydrog WATSON-CRICK D U 32 B O4 U 7 1_555 D A 50 B N6 A 25 1_555 hydrog WATSON-CRICK D G 33 B N1 G 8 1_555 D C 49 B N3 C 24 1_555 hydrog WATSON-CRICK D G 33 B N2 G 8 1_555 D C 49 B O2 C 24 1_555 hydrog WATSON-CRICK D G 33 B O6 G 8 1_555 D C 49 B N4 C 24 1_555 hydrog WATSON-CRICK D A 34 B N1 A 9 1_555 D U 48 B N3 U 23 1_555 hydrog WATSON-CRICK D A 34 B N6 A 9 1_555 D U 48 B O4 U 23 1_555 hydrog C-C MISPAIR D C 36 B N4 C 11 1_555 D C 49 B O2 C 24 1_555 hydrog C-U MISPAIR D C 37 B N4 C 12 1_555 D U 48 B O2 U 23 1_555 hydrog WATSON-CRICK D C 38 B N3 C 13 1_555 D G 44 B N1 G 19 1_555 hydrog WATSON-CRICK D C 38 B N4 C 13 1_555 D G 44 B O6 G 19 1_555 hydrog WATSON-CRICK D C 38 B O2 C 13 1_555 D G 44 B N2 G 19 1_555 hydrog A-A MISPAIR D A 39 B N3 A 14 1_555 D A 46 B N6 A 21 1_555 hydrog U-A PAIR D U 40 B O2 U 15 1_555 D A 45 B N6 A 20 1_555 hydrog G-C PAIR D G 44 B N2 G 19 1_555 D C 47 B N3 C 22 1_555 RIBOSOME ribosomal protein - 5S rRNA complex, RIBOSOME RL5_THETH UNP 2 1 P41201 MPLDVALKRKYYEEVRPELIRRFGYQNVWEVPRLEKVVINQGLGEAKEDARILEKAAQELALITGQKPAVTRAKKSISNF KLRKGMPIGLRVTLRRDRMWIFLEKLLNVALPRIRDFRGLNPNSFDGRGNYNLGLREQLIFPEITYDMVDALRGMDIAVV TTAETDEEARALLELLGFPFRK 1MJI PDB 1 1MJI 1 182 1MJI 1 182 P41201 A 1 1 182 1 182 1MJI 1 182 P41201 B 1 1 182 26 59 1MJI 26 59 1MJI C 2 1 34 26 59 1MJI 26 59 1MJI D 2 1 34 1 MET MODIFIED RESIDUE MSE 99 1MJI A P41201 UNP 99 99 1 MET MODIFIED RESIDUE MSE 155 1MJI A P41201 UNP 155 155 2 MET MODIFIED RESIDUE MSE 99 1MJI B P41201 UNP 99 99 2 MET MODIFIED RESIDUE MSE 155 1MJI B P41201 UNP 155 155 5 2 5 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A ALA 69 C ALA 69 A ARG 72 C ARG 72 A PRO 87 C PRO 87 A LEU 94 C LEU 94 A LEU 34 C LEU 34 A GLY 42 C GLY 42 A MSE 155 C MSE 155 A THR 161 C THR 161 A ASN 130 C ASN 130 A LEU 135 C LEU 135 A LEU 139 C LEU 139 A ILE 140 C ILE 140 A THR 145 C THR 145 A TYR 146 C TYR 146 B ALA 69 D ALA 69 B ARG 72 D ARG 72 B PRO 87 D PRO 87 B LEU 94 D LEU 94 B LEU 34 D LEU 34 B LEU 43 D LEU 43 B LEU 152 D LEU 152 B THR 161 D THR 161 B TYR 131 D TYR 131 B LEU 135 D LEU 135 BINDING SITE FOR RESIDUE MG B 201 Software 5 BINDING SITE FOR RESIDUE MG A 202 Software 5 BINDING SITE FOR RESIDUE MG C 203 Software 4 BINDING SITE FOR RESIDUE MG D 204 Software 4 BINDING SITE FOR RESIDUE K D 205 Software 2 B ARG 128 D ARG 128 5 1_555 B ASN 130 D ASN 130 5 1_555 B THR 161 D THR 161 5 1_555 B ALA 163 D ALA 163 5 1_555 B HOH 219 N HOH 5 1_555 A ARG 128 C ARG 128 5 1_555 A ASN 130 C ASN 130 5 1_555 A THR 161 C THR 161 5 1_555 A ALA 163 C ALA 163 5 1_555 C HOH 211 K HOH 5 1_555 C C 38 A C 13 4 1_555 C A 39 A A 14 4 1_555 C C 47 A C 22 4 1_555 C U 48 A U 23 4 1_555 D C 38 B C 13 4 1_555 D A 39 B A 14 4 1_555 D C 47 B C 22 4 1_555 D U 48 B U 23 4 1_555 D U 32 B U 7 2 1_555 D HOH 221 L HOH 2 1_555 4 P 1 21 1