1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Giri, I.
Jenkins, M.D.
Schnetz-Boutaud, N.C.
Stone, M.P.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C17 H14 O7
330.289
8,9-DIHYDRO-9-HYDROXY-AFLATOXIN B1
non-polymer
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
N
1
N
C
N
2
R
C
N
3
N
O
N
4
R
C
Y
5
N
C
N
6
N
O
N
7
R
C
N
8
N
O
Y
9
N
C
Y
10
N
C
Y
11
N
C
N
12
N
O
N
13
N
C
Y
14
N
C
Y
15
N
C
Y
16
N
O
Y
17
N
C
N
18
N
O
Y
19
N
C
Y
20
N
C
N
21
N
C
N
22
N
C
N
23
N
C
N
24
N
O
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
O
N
40
N
P
N
41
N
O
N
42
N
O
N
43
N
O
N
44
N
C
N
45
R
C
N
46
N
O
N
47
S
C
N
48
N
O
N
49
N
C
N
50
R
C
Y
51
N
N
Y
52
N
C
Y
53
N
N
Y
54
N
C
Y
55
N
C
N
56
N
N
Y
57
N
N
Y
58
N
C
Y
59
N
N
Y
60
N
C
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
O
N
76
N
P
N
77
N
O
N
78
N
O
N
79
N
O
N
80
N
C
N
81
R
C
N
82
N
O
N
83
S
C
N
84
N
O
N
85
N
C
N
86
R
C
N
87
N
N
N
88
N
C
N
89
N
O
N
90
N
N
N
91
N
C
N
92
N
N
N
93
N
C
N
94
N
C
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
O
N
110
N
P
N
111
N
O
N
112
N
O
N
113
N
O
N
114
N
C
N
115
R
C
N
116
N
O
N
117
S
C
N
118
N
O
N
119
N
C
N
120
R
C
Y
121
N
N
Y
122
N
C
Y
123
N
N
Y
124
N
C
N
125
N
C
N
126
N
O
N
127
N
N
N
128
N
C
N
129
N
N
N
130
N
N
Y
131
N
C
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
O
N
147
N
P
N
148
N
O
N
149
N
O
N
150
N
O
N
151
N
C
N
152
R
C
N
153
N
O
N
154
S
C
N
155
N
O
N
156
N
C
N
157
R
C
N
158
N
N
N
159
N
C
N
160
N
O
N
161
N
N
N
162
N
C
N
163
N
O
N
164
N
C
N
165
N
C
N
166
N
C
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
Y
12
N
doub
Y
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
Y
18
N
sing
Y
19
N
doub
N
20
N
sing
N
21
N
sing
Y
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
Y
27
N
doub
Y
28
N
sing
Y
29
N
sing
Y
30
N
sing
N
31
N
doub
Y
32
N
sing
Y
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
doub
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
Y
66
N
sing
Y
67
N
sing
Y
68
N
doub
N
69
N
sing
Y
70
N
sing
Y
71
N
sing
Y
72
N
doub
N
73
N
sing
Y
74
N
doub
N
75
N
sing
N
76
N
sing
Y
77
N
sing
Y
78
N
doub
N
79
N
sing
Y
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
doub
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
doub
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
Y
139
N
sing
Y
140
N
sing
Y
141
N
doub
N
142
N
sing
Y
143
N
sing
N
144
N
sing
Y
145
N
doub
N
146
N
doub
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
doub
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
doub
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
doub
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
US
Chem.Res.Toxicol.
CRTOEC
2140
0893-228X
15
638
647
10.1021/tx010187n
12018984
Structural refinement of the 8,9-dihydro-8-(N7-guanyl)-9-hydroxy-aflatoxin B(1) adduct in a 5'-Cp(AFB)G-3' sequence.
2002
10.2210/pdb1mkl/pdb
pdb_00001mkl
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
3003.993
5'-D(*AP*CP*AP*TP*CP*GP*AP*TP*CP*T)-3'
1
syn
polymer
3084.041
5'-D(*AP*GP*AP*TP*CP*GP*AP*TP*GP*T)-3'
1
syn
polymer
330.289
8,9-DIHYDRO-9-HYDROXY-AFLATOXIN B1
1
syn
non-polymer
no
no
(DA)(DC)(DA)(DT)(DC)(DG)(DA)(DT)(DC)(DT)
ACATCGATCT
A
polydeoxyribonucleotide
no
no
(DA)(DG)(DA)(DT)(DC)(DG)(DA)(DT)(DG)(DT)
AGATCGATGT
B
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
13.670
1
20
A
1
B
20
-3.303
A_DA1:DT20_B
1
-8.396
0.221
-0.070
0.173
9.156
1
19
A
2
B
19
-0.818
A_DC2:DG19_B
2
-13.718
0.175
-0.344
-0.158
-4.112
1
20
A
3
B
18
0.159
A_DA3:DT18_B
3
11.597
0.144
0.165
-0.025
19.876
1
20
A
4
B
17
-2.894
A_DT4:DA17_B
4
8.578
-0.567
-0.074
0.093
13.795
1
19
A
5
B
16
1.392
A_DC5:DG16_B
5
-0.113
0.322
0.013
-0.068
-26.692
1
19
A
6
B
15
-4.198
A_DG6:DC15_B
6
-8.655
-0.211
0.003
-0.022
-6.472
1
20
A
7
B
14
-4.933
A_DA7:DT14_B
7
-6.126
0.473
0.218
0.029
-9.857
1
20
A
8
B
13
-6.875
A_DT8:DA13_B
8
-1.276
-0.081
0.308
-0.052
-7.165
1
19
A
9
B
12
-1.363
A_DC9:DG12_B
9
10.383
-0.030
0.033
-0.113
-10.989
1
20
A
10
B
11
0.369
A_DT10:DA11_B
10
1.193
0.021
0.533
-0.138
3.675
31.638
A
A
1
2
-10.539
B
B
20
19
3.550
-5.714
-0.263
-1.095
AA_DA1DC2:DG19DT20_BB
1
1.231
-2.271
31.107
-0.832
0.736
3.337
41.896
A
A
2
3
15.255
B
B
19
18
3.541
10.755
-0.579
-0.570
AA_DC2DA3:DT18DG19_BB
2
-6.471
9.179
40.053
-2.007
0.083
2.797
19.133
A
A
3
4
11.041
B
B
18
17
2.981
3.646
0.061
-0.686
AA_DA3DT4:DA17DT18_BB
3
1.066
-3.228
18.756
-3.722
0.301
3.463
33.100
A
A
4
5
9.108
B
B
17
16
3.583
5.166
0.029
-0.474
AA_DT4DC5:DG16DA17_BB
4
-1.830
3.226
32.656
-1.777
-0.386
6.115
27.669
A
A
5
6
31.394
B
B
16
15
7.410
14.274
0.486
-0.517
AA_DC5DG6:DC15DG16_BB
5
3.293
-7.243
23.538
-8.843
0.774
2.994
30.154
A
A
6
7
-5.033
B
B
15
14
2.861
-2.613
-1.106
-0.875
AA_DG6DA7:DT14DC15_BB
6
-2.129
4.100
29.969
-1.203
1.737
3.496
28.444
A
A
7
8
-1.763
B
B
14
13
3.466
-0.866
-0.049
-1.225
AA_DA7DT8:DA13DT14_BB
7
1.226
-2.497
28.405
-2.281
0.398
3.571
36.986
A
A
8
9
4.559
B
B
13
12
3.671
2.889
0.620
-0.733
AA_DT8DC9:DG12DA13_BB
8
-1.846
2.914
36.832
-1.586
-1.253
3.583
26.067
A
A
9
10
8.762
B
B
12
11
3.719
3.937
0.248
-0.680
AA_DC9DT10:DA11DG12_BB
9
0.885
-1.971
25.758
-2.716
-0.278
atom_site
chem_comp
entity
entity_poly
entity_poly_seq
ndb_struct_na_base_pair
ndb_struct_na_base_pair_step
pdbx_entity_nonpoly
pdbx_entity_src_syn
pdbx_nonpoly_scheme
pdbx_poly_seq_scheme
pdbx_struct_assembly
pdbx_struct_mod_residue
pdbx_struct_oper_list
pdbx_validate_planes
struct_asym
struct_conn
struct_ref
chem_comp_atom
chem_comp_bond
database_2
pdbx_nmr_software
struct_conn
repository
Initial release
Version format compliance
Version format compliance
Atomic model
Data collection
Database references
Derived calculations
Non-polymer description
Polymer sequence
Source and taxonomy
Structure summary
Data collection
Database references
Derived calculations
1
0
2002-10-16
1
1
2008-04-28
1
2
2011-07-13
2
0
2019-01-30
2
1
2024-05-01
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.group_PDB
_atom_site.label_asym_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.type_symbol
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.id
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.type
_entity_poly.nstd_monomer
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
_entity_poly_seq.mon_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.step_name
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_mon_id
_struct_ref.pdbx_align_begin
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
_struct_conn.pdbx_leaving_atom_flag
SOLUTION STRUCTURE OF THE 8,9-DIHYDRO-8-(N7-GUANYL)-9-HYDROXY-AFLATOXIN B1 ADDUCT MISPAIRED WITH DEOXYADENOSINE
RCSB
Y
RCSB
2002-08-29
REL
REL
AFN
8,9-DIHYDRO-9-HYDROXY-AFLATOXIN B1
32630
synthetic construct
sample
1
10
32630
synthetic construct
sample
1
10
1
2D NOESY
DQF-COSY
0.5 mL of 0.01 M sodium phosphate buffer containing 0.1 M NaCl and 0.05 mM Na2EDTA at pD 7.2, in 99.999% D2O
7.2
1
atm
283
K
0.5 mL of 0.01 M sodium phosphate buffer containing 0.1 M NaCl and 0.05 mM Na2EDTA at pH 7.2, in 9:1 H2O:D2O
7.2
1
atm
283
K
The structures are based on 341 distance retraints, 38 empirical H-bond restraints, 17 sugar pucker restraints, and 89 empirical torsion angle restraints
Data was processed using felix 97. The NOE intensities were converted to distance using RANMARDI module of MARDIGRAS. Starting structures were built using InsightII. XPLOR was used for structural refinement. Final averaged structure was solvated using AMBER. And MD simulated annealing was performed in presence of counter ions using SANDER protocol. The back calculations were performed using CORMA.
1
simulated annealing structure, calculaed starting from energy minmized averaged structure from 20 final structures. the enrgy minimized structure was solvated, and md simulation annealing was performed in presence of counter ions
99.999% D2O
90% H2O/10% D2O
Bruker
collection
XwinNMR
3.0
Accelrys Inc.
processing
Felix
97
Borgias, B. A., and James, T. L. (1990) MARDIGRAS- -a procedure for matrix analysis of relaxation for discerning geometry of an aqueous structure. J. Magn. Reson. 87, 475-487
data analysis
MARDIGRAS
5.2
A.T.Brunger
refinement
X-PLOR
3.851
Keepers, J. W., and James, T. L. (1984)J. Magn. Reson. 87, 475-487.
iterative matrix relaxation
CORMA
5.2
Case, D. A., and Pearlman C. A., et al. (1999) Amber 6.0, University of California, San Francisco, CA.
structure solution
Amber
6.0
500
Bruker
DRX
600
Bruker
DRX
X
6
3
AFN
AFN
11
A
A
1
n
1
DA
1
A
C
2
n
2
DC
2
A
A
3
n
3
DA
3
A
T
4
n
4
DT
4
A
C
5
n
5
DC
5
A
X
6
n
6
DG
6
A
A
7
n
7
DA
7
A
T
8
n
8
DT
8
A
C
9
n
9
DC
9
A
T
10
n
10
DT
10
A
A
11
n
1
DA
11
B
G
12
n
2
DG
12
B
A
13
n
3
DA
13
B
T
14
n
4
DT
14
B
C
15
n
5
DC
15
B
G
16
n
6
DG
16
B
A
17
n
7
DA
17
B
T
18
n
8
DT
18
B
G
19
n
9
DG
19
B
T
20
n
10
DT
20
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
DG
6
0.154
SIDE CHAIN
1
A
DC
9
0.056
SIDE CHAIN
1
B
DG
12
0.101
SIDE CHAIN
1
B
DA
13
0.097
SIDE CHAIN
1
B
DG
19
0.068
SIDE CHAIN
1
3.18
0.50
117.70
120.88
A
A
A
C5
C6
N1
DA
DA
DA
1
1
1
N
1
-4.36
0.60
118.60
114.24
A
A
A
N1
C6
N6
DA
DA
DA
1
1
1
N
1
3.46
0.30
108.30
111.76
A
A
A
O4'
C1'
N1
DC
DC
DC
2
2
2
N
1
-4.64
0.70
121.90
117.26
A
A
A
N3
C2
O2
DC
DC
DC
2
2
2
N
1
-4.00
0.60
118.60
114.60
A
A
A
N1
C6
N6
DA
DA
DA
3
3
3
N
1
4.52
0.30
108.30
112.82
A
A
A
O4'
C1'
N1
DT
DT
DT
4
4
4
N
1
-4.10
0.60
122.90
118.80
A
A
A
C6
C5
C7
DT
DT
DT
4
4
4
N
1
2.87
0.30
108.30
111.17
A
A
A
O4'
C1'
N1
DC
DC
DC
5
5
5
N
1
3.37
0.50
117.70
121.07
A
A
A
C5
C6
N1
DA
DA
DA
7
7
7
N
1
-4.51
0.60
118.60
114.09
A
A
A
N1
C6
N6
DA
DA
DA
7
7
7
N
1
-3.74
0.60
122.90
119.16
A
A
A
C6
C5
C7
DT
DT
DT
8
8
8
N
1
-4.40
0.70
121.90
117.50
A
A
A
N3
C2
O2
DC
DC
DC
9
9
9
N
1
2.37
0.30
108.30
110.67
A
A
A
O4'
C1'
N1
DT
DT
DT
10
10
10
N
1
-5.07
0.60
122.90
117.83
A
A
A
C6
C5
C7
DT
DT
DT
10
10
10
N
1
-3.01
0.50
117.00
113.99
B
B
B
C4
C5
C6
DA
DA
DA
11
11
11
N
1
-3.92
0.60
118.60
114.68
B
B
B
N1
C6
N6
DA
DA
DA
11
11
11
N
1
3.66
0.30
108.30
111.96
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
1
3.36
0.50
117.70
121.06
B
B
B
C5
C6
N1
DA
DA
DA
13
13
13
N
1
2.31
0.30
108.30
110.61
B
B
B
O4'
C1'
N1
DT
DT
DT
14
14
14
N
1
-4.18
0.60
122.90
118.72
B
B
B
C6
C5
C7
DT
DT
DT
14
14
14
N
1
3.11
0.30
108.30
111.41
B
B
B
O4'
C1'
N1
DC
DC
DC
15
15
15
N
1
3.67
0.60
118.90
122.57
B
B
B
N1
C2
O2
DC
DC
DC
15
15
15
N
1
-4.60
0.70
121.90
117.30
B
B
B
N3
C2
O2
DC
DC
DC
15
15
15
N
1
-4.27
0.60
119.90
115.63
B
B
B
N1
C6
O6
DG
DG
DG
16
16
16
N
1
-4.87
0.60
118.60
113.73
B
B
B
N1
C6
N6
DA
DA
DA
17
17
17
N
1
1.83
0.30
108.30
110.13
B
B
B
O4'
C1'
N1
DT
DT
DT
18
18
18
N
1
-3.80
0.60
122.90
119.10
B
B
B
C6
C5
C7
DT
DT
DT
18
18
18
N
1
5.38
0.30
108.30
113.68
B
B
B
O4'
C1'
N1
DT
DT
DT
20
20
20
N
1
-5.56
0.60
122.90
117.34
B
B
B
C6
C5
C7
DT
DT
DT
20
20
20
N
NMR REFINED STRUCTURE OF THE 8,9-DIHYDRO-8-(N7-GUANYL)-9-HYDROXY-AFLATOXIN B1 ADDUCT IN A 5'-CPAFBG-3' SEQUENCE
1
N
N
2
N
N
3
N
N
covale
1.502
none
sing
A
DG
6
A
N7
DG
6
1_555
A
AFN
11
C
C8A
AFN
1_555
hydrog
WATSON-CRICK
A
DA
1
A
N1
DA
1
1_555
B
DT
20
B
N3
DT
10
1_555
hydrog
WATSON-CRICK
A
DA
1
A
N6
DA
1
1_555
B
DT
20
B
O4
DT
10
1_555
hydrog
WATSON-CRICK
A
DC
2
A
N3
DC
2
1_555
B
DG
19
B
N1
DG
9
1_555
hydrog
WATSON-CRICK
A
DC
2
A
N4
DC
2
1_555
B
DG
19
B
O6
DG
9
1_555
hydrog
WATSON-CRICK
A
DC
2
A
O2
DC
2
1_555
B
DG
19
B
N2
DG
9
1_555
hydrog
WATSON-CRICK
A
DA
3
A
N1
DA
3
1_555
B
DT
18
B
N3
DT
8
1_555
hydrog
WATSON-CRICK
A
DA
3
A
N6
DA
3
1_555
B
DT
18
B
O4
DT
8
1_555
hydrog
WATSON-CRICK
A
DT
4
A
N3
DT
4
1_555
B
DA
17
B
N1
DA
7
1_555
hydrog
WATSON-CRICK
A
DT
4
A
O4
DT
4
1_555
B
DA
17
B
N6
DA
7
1_555
hydrog
WATSON-CRICK
A
DC
5
A
N3
DC
5
1_555
B
DG
16
B
N1
DG
6
1_555
hydrog
WATSON-CRICK
A
DC
5
A
N4
DC
5
1_555
B
DG
16
B
O6
DG
6
1_555
hydrog
WATSON-CRICK
A
DC
5
A
O2
DC
5
1_555
B
DG
16
B
N2
DG
6
1_555
hydrog
WATSON-CRICK
A
DG
6
A
N1
DG
6
1_555
B
DC
15
B
N3
DC
5
1_555
hydrog
WATSON-CRICK
A
DG
6
A
N2
DG
6
1_555
B
DC
15
B
O2
DC
5
1_555
hydrog
WATSON-CRICK
A
DG
6
A
O6
DG
6
1_555
B
DC
15
B
N4
DC
5
1_555
hydrog
WATSON-CRICK
A
DA
7
A
N1
DA
7
1_555
B
DT
14
B
N3
DT
4
1_555
hydrog
WATSON-CRICK
A
DA
7
A
N6
DA
7
1_555
B
DT
14
B
O4
DT
4
1_555
hydrog
WATSON-CRICK
A
DT
8
A
N3
DT
8
1_555
B
DA
13
B
N1
DA
3
1_555
hydrog
WATSON-CRICK
A
DT
8
A
O4
DT
8
1_555
B
DA
13
B
N6
DA
3
1_555
hydrog
WATSON-CRICK
A
DC
9
A
N3
DC
9
1_555
B
DG
12
B
N1
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
9
A
N4
DC
9
1_555
B
DG
12
B
O6
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
9
A
O2
DC
9
1_555
B
DG
12
B
N2
DG
2
1_555
hydrog
WATSON-CRICK
A
DT
10
A
N3
DT
10
1_555
B
DA
11
B
N1
DA
1
1_555
hydrog
WATSON-CRICK
A
DT
10
A
O4
DT
10
1_555
B
DA
11
B
N6
DA
1
1_555
DNA
Structure of the 8, 9-Dihydro-8-(N7-guanyl)-9-hydroxy-aflatoxin B1 Adduct in a 5'-CpAFBG-3' Sequence context, DNA
1MKL
PDB
1
1
1MKL
1MKL
PDB
2
1
1MKL
1
10
1MKL
1
10
1MKL
A
1
1
10
11
20
1MKL
11
20
1MKL
B
2
1
10