0.012547 0.000000 0.000000 0.000000 0.007342 0.000000 0.000000 0.000000 0.023256 0.00000 0.00000 0.00000 CIS PROLINE - PRO A 8 CIS PROLINE - PRO A 95 CIS PROLINE - PRO A 141 CIS PROLINE - PRO B 150 CIS PROLINE - PRO B 152 CIS PROLINE - PRO B 192 Braden, B.C. Souchon, H. Eisele, J.-L. Bentley, G.A. Bhat, T.N. Navaza, J. Poljak, R.J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 79.700 136.200 43.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK J.Mol.Biol. JMOBAK 0070 0022-2836 243 767 781 10.1016/0022-2836(94)90046-9 7966295 Three-dimensional structures of the free and the antigen-complexed Fab from monoclonal anti-lysozyme antibody D44.1. 1994 UK J.Mol.Biol. JMOBAK 0070 0022-2836 203 527 Crystallization and Preliminary X-Ray Diffraction Studies of Two Antigen-Antibody (Lysozyme-Fab) Complexes 1988 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 AREA DETECTOR SIEMENS x-ray 1 1.5418 1.0 1.5418 23609.846 IGG1-KAPPA D44.1 FAB (LIGHT CHAIN) 1 man polymer 23215.848 IGG1-KAPPA D44.1 FAB (HEAVY CHAIN) 1 man polymer 18.015 water 115 nat water no no DIELTQSPATLSVTPGDSVSLSCRASQSISNNLHWYQQKSHESPRLLIKYVSQSSSGIPSRFSGSGSGTDFTLSINSVET EDFGMYFCQQSNSWPRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVL NSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC DIELTQSPATLSVTPGDSVSLSCRASQSISNNLHWYQQKSHESPRLLIKYVSQSSSGIPSRFSGSGSGTDFTLSINSVET EDFGMYFCQQSNSWPRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVL NSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC A polypeptide(L) no no QVQLQESGAEVMKPGASVKISCKATGYTFSTYWIEWVKQRPGHGLEWIGEILPGSGSTYYNEKFKGKATFTADTSSNTAY MQLSSLTSEDSAVYYCARGDGNYGYWGQGTTLTVSSASTTPPSVFPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSG SLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPRDC QVQLQESGAEVMKPGASVKISCKATGYTFSTYWIEWVKQRPGHGLEWIGEILPGSGSTYYNEKFKGKATFTADTSSNTAY MQLSSLTSEDSAVYYCARGDGNYGYWGQGTTLTVSSASTTPPSVFPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSG SLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPRDC B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n mouse sample 10090 Mus musculus mouse sample 10090 Mus musculus 1 2.49 50.62 repository Initial release Version format compliance Version format compliance Source and taxonomy 1 0 1995-06-03 1 1 2008-03-25 1 2 2011-07-13 1 3 2013-09-18 Y BNL 1995-03-08 REL HOH water VL RESIDUE SER 30 IS IN THE SECOND POSITION OF A II'-TYPE TURN. VL RESIDUE VAL 51 IS THE SECOND RESIDUE (I+1) OF A MODIFIED GAMMA TURN (CLASS 3). HOH 301 3 HOH HOH 301 A HOH 302 3 HOH HOH 302 A HOH 303 3 HOH HOH 303 A HOH 304 3 HOH HOH 304 A HOH 305 3 HOH HOH 305 A HOH 306 3 HOH HOH 306 A HOH 307 3 HOH HOH 307 A HOH 308 3 HOH HOH 308 A HOH 309 3 HOH HOH 309 A HOH 310 3 HOH HOH 310 A HOH 311 3 HOH HOH 311 A HOH 312 3 HOH HOH 312 A HOH 314 3 HOH HOH 314 A HOH 315 3 HOH HOH 315 A HOH 316 3 HOH HOH 316 A HOH 317 3 HOH HOH 317 A HOH 318 3 HOH HOH 318 A HOH 320 3 HOH HOH 320 A HOH 321 3 HOH HOH 321 A HOH 322 3 HOH HOH 322 A HOH 323 3 HOH HOH 323 A HOH 324 3 HOH HOH 324 A HOH 325 3 HOH HOH 325 A HOH 326 3 HOH HOH 326 A HOH 327 3 HOH HOH 327 A HOH 329 3 HOH HOH 329 A HOH 330 3 HOH HOH 330 A HOH 331 3 HOH HOH 331 A HOH 332 3 HOH HOH 332 A HOH 333 3 HOH HOH 333 A HOH 334 3 HOH HOH 334 A HOH 336 3 HOH HOH 336 A HOH 337 3 HOH HOH 337 A HOH 338 3 HOH HOH 338 A HOH 339 3 HOH HOH 339 A HOH 343 3 HOH HOH 343 A HOH 344 3 HOH HOH 344 A HOH 345 3 HOH HOH 345 A HOH 346 3 HOH HOH 346 A HOH 347 3 HOH HOH 347 A HOH 348 3 HOH HOH 348 A HOH 349 3 HOH HOH 349 A HOH 350 3 HOH HOH 350 A HOH 351 3 HOH HOH 351 A HOH 352 3 HOH HOH 352 A HOH 353 3 HOH HOH 353 A HOH 354 3 HOH HOH 354 A HOH 355 3 HOH HOH 355 A HOH 356 3 HOH HOH 356 A HOH 359 3 HOH HOH 359 A HOH 361 3 HOH HOH 361 A HOH 363 3 HOH HOH 363 A HOH 364 3 HOH HOH 364 A HOH 367 3 HOH HOH 367 A HOH 368 3 HOH HOH 368 A HOH 369 3 HOH HOH 369 A HOH 370 3 HOH HOH 370 A HOH 371 3 HOH HOH 371 A HOH 372 3 HOH HOH 372 A HOH 374 3 HOH HOH 374 A HOH 375 3 HOH HOH 375 A HOH 376 3 HOH HOH 376 A HOH 377 3 HOH HOH 377 A HOH 379 3 HOH HOH 379 A HOH 380 3 HOH HOH 380 A HOH 381 3 HOH HOH 381 A HOH 382 3 HOH HOH 382 A HOH 383 3 HOH HOH 383 A HOH 384 3 HOH HOH 384 A HOH 386 3 HOH HOH 386 A HOH 407 3 HOH HOH 407 A HOH 319 3 HOH HOH 319 B HOH 341 3 HOH HOH 341 B HOH 342 3 HOH HOH 342 B HOH 357 3 HOH HOH 357 B HOH 366 3 HOH HOH 366 B HOH 401 3 HOH HOH 401 B HOH 403 3 HOH HOH 403 B HOH 404 3 HOH HOH 404 B HOH 405 3 HOH HOH 405 B HOH 406 3 HOH HOH 406 B HOH 409 3 HOH HOH 409 B HOH 411 3 HOH HOH 411 B HOH 412 3 HOH HOH 412 B HOH 415 3 HOH HOH 415 B HOH 417 3 HOH HOH 417 B HOH 418 3 HOH HOH 418 B HOH 419 3 HOH HOH 419 B HOH 420 3 HOH HOH 420 B HOH 421 3 HOH HOH 421 B HOH 423 3 HOH HOH 423 B HOH 426 3 HOH HOH 426 B HOH 428 3 HOH HOH 428 B HOH 430 3 HOH HOH 430 B HOH 431 3 HOH HOH 431 B HOH 432 3 HOH HOH 432 B HOH 433 3 HOH HOH 433 B HOH 434 3 HOH HOH 434 B HOH 435 3 HOH HOH 435 B HOH 437 3 HOH HOH 437 B HOH 438 3 HOH HOH 438 B HOH 440 3 HOH HOH 440 B HOH 441 3 HOH HOH 441 B HOH 443 3 HOH HOH 443 B HOH 445 3 HOH HOH 445 B HOH 446 3 HOH HOH 446 B HOH 447 3 HOH HOH 447 B HOH 448 3 HOH HOH 448 B HOH 449 3 HOH HOH 449 B HOH 450 3 HOH HOH 450 B HOH 452 3 HOH HOH 452 B HOH 453 3 HOH HOH 453 B HOH 454 3 HOH HOH 454 B HOH 456 3 HOH HOH 456 B HOH 457 3 HOH HOH 457 B ASP 1 n 1 ASP 1 A ILE 2 n 2 ILE 2 A GLU 3 n 3 GLU 3 A LEU 4 n 4 LEU 4 A THR 5 n 5 THR 5 A GLN 6 n 6 GLN 6 A SER 7 n 7 SER 7 A PRO 8 n 8 PRO 8 A ALA 9 n 9 ALA 9 A THR 10 n 10 THR 10 A LEU 11 n 11 LEU 11 A SER 12 n 12 SER 12 A VAL 13 n 13 VAL 13 A THR 14 n 14 THR 14 A PRO 15 n 15 PRO 15 A GLY 16 n 16 GLY 16 A ASP 17 n 17 ASP 17 A SER 18 n 18 SER 18 A VAL 19 n 19 VAL 19 A SER 20 n 20 SER 20 A LEU 21 n 21 LEU 21 A SER 22 n 22 SER 22 A CYS 23 n 23 CYS 23 A ARG 24 n 24 ARG 24 A ALA 25 n 25 ALA 25 A SER 26 n 26 SER 26 A GLN 27 n 27 GLN 27 A SER 28 n 28 SER 28 A ILE 29 n 29 ILE 29 A SER 30 n 30 SER 30 A ASN 31 n 31 ASN 31 A ASN 32 n 32 ASN 32 A LEU 33 n 33 LEU 33 A HIS 34 n 34 HIS 34 A TRP 35 n 35 TRP 35 A TYR 36 n 36 TYR 36 A GLN 37 n 37 GLN 37 A GLN 38 n 38 GLN 38 A LYS 39 n 39 LYS 39 A SER 40 n 40 SER 40 A HIS 41 n 41 HIS 41 A GLU 42 n 42 GLU 42 A SER 43 n 43 SER 43 A PRO 44 n 44 PRO 44 A ARG 45 n 45 ARG 45 A LEU 46 n 46 LEU 46 A LEU 47 n 47 LEU 47 A ILE 48 n 48 ILE 48 A LYS 49 n 49 LYS 49 A TYR 50 n 50 TYR 50 A VAL 51 n 51 VAL 51 A SER 52 n 52 SER 52 A GLN 53 n 53 GLN 53 A SER 54 n 54 SER 54 A SER 55 n 55 SER 55 A SER 56 n 56 SER 56 A GLY 57 n 57 GLY 57 A ILE 58 n 58 ILE 58 A PRO 59 n 59 PRO 59 A SER 60 n 60 SER 60 A ARG 61 n 61 ARG 61 A PHE 62 n 62 PHE 62 A SER 63 n 63 SER 63 A GLY 64 n 64 GLY 64 A SER 65 n 65 SER 65 A GLY 66 n 66 GLY 66 A SER 67 n 67 SER 67 A GLY 68 n 68 GLY 68 A THR 69 n 69 THR 69 A ASP 70 n 70 ASP 70 A PHE 71 n 71 PHE 71 A THR 72 n 72 THR 72 A LEU 73 n 73 LEU 73 A SER 74 n 74 SER 74 A ILE 75 n 75 ILE 75 A ASN 76 n 76 ASN 76 A SER 77 n 77 SER 77 A VAL 78 n 78 VAL 78 A GLU 79 n 79 GLU 79 A THR 80 n 80 THR 80 A GLU 81 n 81 GLU 81 A ASP 82 n 82 ASP 82 A PHE 83 n 83 PHE 83 A GLY 84 n 84 GLY 84 A MET 85 n 85 MET 85 A TYR 86 n 86 TYR 86 A PHE 87 n 87 PHE 87 A CYS 88 n 88 CYS 88 A GLN 89 n 89 GLN 89 A GLN 90 n 90 GLN 90 A SER 91 n 91 SER 91 A ASN 92 n 92 ASN 92 A SER 93 n 93 SER 93 A TRP 94 n 94 TRP 94 A PRO 95 n 95 PRO 95 A ARG 96 n 96 ARG 96 A THR 97 n 97 THR 97 A PHE 98 n 98 PHE 98 A GLY 99 n 99 GLY 99 A GLY 100 n 100 GLY 100 A GLY 101 n 101 GLY 101 A THR 102 n 102 THR 102 A LYS 103 n 103 LYS 103 A LEU 104 n 104 LEU 104 A GLU 105 n 105 GLU 105 A ILE 106 n 106 ILE 106 A LYS 107 n 107 LYS 107 A ARG 108 n 108 ARG 108 A ALA 109 n 109 ALA 109 A ASP 110 n 110 ASP 110 A ALA 111 n 111 ALA 111 A ALA 112 n 112 ALA 112 A PRO 113 n 113 PRO 113 A THR 114 n 114 THR 114 A VAL 115 n 115 VAL 115 A SER 116 n 116 SER 116 A ILE 117 n 117 ILE 117 A PHE 118 n 118 PHE 118 A PRO 119 n 119 PRO 119 A PRO 120 n 120 PRO 120 A SER 121 n 121 SER 121 A SER 122 n 122 SER 122 A GLU 123 n 123 GLU 123 A GLN 124 n 124 GLN 124 A LEU 125 n 125 LEU 125 A THR 126 n 126 THR 126 A SER 127 n 127 SER 127 A GLY 128 n 128 GLY 128 A GLY 129 n 129 GLY 129 A ALA 130 n 130 ALA 130 A SER 131 n 131 SER 131 A VAL 132 n 132 VAL 132 A VAL 133 n 133 VAL 133 A CYS 134 n 134 CYS 134 A PHE 135 n 135 PHE 135 A LEU 136 n 136 LEU 136 A ASN 137 n 137 ASN 137 A ASN 138 n 138 ASN 138 A PHE 139 n 139 PHE 139 A TYR 140 n 140 TYR 140 A PRO 141 n 141 PRO 141 A LYS 142 n 142 LYS 142 A ASP 143 n 143 ASP 143 A ILE 144 n 144 ILE 144 A ASN 145 n 145 ASN 145 A VAL 146 n 146 VAL 146 A LYS 147 n 147 LYS 147 A TRP 148 n 148 TRP 148 A LYS 149 n 149 LYS 149 A ILE 150 n 150 ILE 150 A ASP 151 n 151 ASP 151 A GLY 152 n 152 GLY 152 A SER 153 n 153 SER 153 A GLU 154 n 154 GLU 154 A ARG 155 n 155 ARG 155 A GLN 156 n 156 GLN 156 A ASN 157 n 157 ASN 157 A GLY 158 n 158 GLY 158 A VAL 159 n 159 VAL 159 A LEU 160 n 160 LEU 160 A ASN 161 n 161 ASN 161 A SER 162 n 162 SER 162 A TRP 163 n 163 TRP 163 A THR 164 n 164 THR 164 A ASP 165 n 165 ASP 165 A GLN 166 n 166 GLN 166 A ASP 167 n 167 ASP 167 A SER 168 n 168 SER 168 A LYS 169 n 169 LYS 169 A ASP 170 n 170 ASP 170 A SER 171 n 171 SER 171 A THR 172 n 172 THR 172 A TYR 173 n 173 TYR 173 A SER 174 n 174 SER 174 A MET 175 n 175 MET 175 A SER 176 n 176 SER 176 A SER 177 n 177 SER 177 A THR 178 n 178 THR 178 A LEU 179 n 179 LEU 179 A THR 180 n 180 THR 180 A LEU 181 n 181 LEU 181 A THR 182 n 182 THR 182 A LYS 183 n 183 LYS 183 A ASP 184 n 184 ASP 184 A GLU 185 n 185 GLU 185 A TYR 186 n 186 TYR 186 A GLU 187 n 187 GLU 187 A ARG 188 n 188 ARG 188 A HIS 189 n 189 HIS 189 A ASN 190 n 190 ASN 190 A SER 191 n 191 SER 191 A TYR 192 n 192 TYR 192 A THR 193 n 193 THR 193 A CYS 194 n 194 CYS 194 A GLU 195 n 195 GLU 195 A ALA 196 n 196 ALA 196 A THR 197 n 197 THR 197 A HIS 198 n 198 HIS 198 A LYS 199 n 199 LYS 199 A THR 200 n 200 THR 200 A SER 201 n 201 SER 201 A THR 202 n 202 THR 202 A SER 203 n 203 SER 203 A PRO 204 n 204 PRO 204 A ILE 205 n 205 ILE 205 A VAL 206 n 206 VAL 206 A LYS 207 n 207 LYS 207 A SER 208 n 208 SER 208 A PHE 209 n 209 PHE 209 A ASN 210 n 210 ASN 210 A ARG 211 n 211 ARG 211 A ASN 212 n 212 ASN 212 A GLU 213 n 213 GLU 213 A CYS 214 n 214 CYS 214 A GLN 1 n 1 GLN 1 B VAL 2 n 2 VAL 2 B GLN 3 n 3 GLN 3 B LEU 4 n 4 LEU 4 B GLN 5 n 5 GLN 5 B GLU 6 n 6 GLU 6 B SER 7 n 7 SER 7 B GLY 8 n 8 GLY 8 B ALA 9 n 9 ALA 9 B GLU 10 n 10 GLU 10 B VAL 11 n 11 VAL 11 B MET 12 n 12 MET 12 B LYS 13 n 13 LYS 13 B PRO 14 n 14 PRO 14 B GLY 15 n 15 GLY 15 B ALA 16 n 16 ALA 16 B SER 17 n 17 SER 17 B VAL 18 n 18 VAL 18 B LYS 19 n 19 LYS 19 B ILE 20 n 20 ILE 20 B SER 21 n 21 SER 21 B CYS 22 n 22 CYS 22 B LYS 23 n 23 LYS 23 B ALA 24 n 24 ALA 24 B THR 25 n 25 THR 25 B GLY 26 n 26 GLY 26 B TYR 27 n 27 TYR 27 B THR 28 n 28 THR 28 B PHE 29 n 29 PHE 29 B SER 30 n 30 SER 30 B THR 31 n 31 THR 31 B TYR 32 n 32 TYR 32 B TRP 33 n 33 TRP 33 B ILE 34 n 34 ILE 34 B GLU 35 n 35 GLU 35 B TRP 36 n 36 TRP 36 B VAL 37 n 37 VAL 37 B LYS 38 n 38 LYS 38 B GLN 39 n 39 GLN 39 B ARG 40 n 40 ARG 40 B PRO 41 n 41 PRO 41 B GLY 42 n 42 GLY 42 B HIS 43 n 43 HIS 43 B GLY 44 n 44 GLY 44 B LEU 45 n 45 LEU 45 B GLU 46 n 46 GLU 46 B TRP 47 n 47 TRP 47 B ILE 48 n 48 ILE 48 B GLY 49 n 49 GLY 49 B GLU 50 n 50 GLU 50 B ILE 51 n 51 ILE 51 B LEU 52 n 52 LEU 52 B PRO 53 n 53 PRO 53 B GLY 54 n 54 GLY 54 B SER 55 n 55 SER 55 B GLY 56 n 56 GLY 56 B SER 57 n 57 SER 57 B THR 58 n 58 THR 58 B TYR 59 n 59 TYR 59 B TYR 60 n 60 TYR 60 B ASN 61 n 61 ASN 61 B GLU 62 n 62 GLU 62 B LYS 63 n 63 LYS 63 B PHE 64 n 64 PHE 64 B LYS 65 n 65 LYS 65 B GLY 66 n 66 GLY 66 B LYS 67 n 67 LYS 67 B ALA 68 n 68 ALA 68 B THR 69 n 69 THR 69 B PHE 70 n 70 PHE 70 B THR 71 n 71 THR 71 B ALA 72 n 72 ALA 72 B ASP 73 n 73 ASP 73 B THR 74 n 74 THR 74 B SER 75 n 75 SER 75 B SER 76 n 76 SER 76 B ASN 77 n 77 ASN 77 B THR 78 n 78 THR 78 B ALA 79 n 79 ALA 79 B TYR 80 n 80 TYR 80 B MET 81 n 81 MET 81 B GLN 82 n 82 GLN 82 B LEU 83 n 83 LEU 83 B SER 84 n 84 SER 84 B SER 85 n 85 SER 85 B LEU 86 n 86 LEU 86 B THR 87 n 87 THR 87 B SER 88 n 88 SER 88 B GLU 89 n 89 GLU 89 B ASP 90 n 90 ASP 90 B SER 91 n 91 SER 91 B ALA 92 n 92 ALA 92 B VAL 93 n 93 VAL 93 B TYR 94 n 94 TYR 94 B TYR 95 n 95 TYR 95 B CYS 96 n 96 CYS 96 B ALA 97 n 97 ALA 97 B ARG 98 n 98 ARG 98 B GLY 99 n 99 GLY 99 B ASP 100 n 100 ASP 100 B GLY 101 n 101 GLY 101 B ASN 102 n 102 ASN 102 B TYR 103 n 103 TYR 103 B GLY 104 n 104 GLY 104 B TYR 105 n 105 TYR 105 B TRP 106 n 106 TRP 106 B GLY 107 n 107 GLY 107 B GLN 108 n 108 GLN 108 B GLY 109 n 109 GLY 109 B THR 110 n 110 THR 110 B THR 111 n 111 THR 111 B LEU 112 n 112 LEU 112 B THR 113 n 113 THR 113 B VAL 114 n 114 VAL 114 B SER 115 n 115 SER 115 B SER 116 n 116 SER 116 B ALA 117 n 117 ALA 117 B SER 118 n 118 SER 118 B THR 119 n 119 THR 119 B THR 120 n 120 THR 120 B PRO 121 n 121 PRO 121 B PRO 122 n 122 PRO 122 B SER 123 n 123 SER 123 B VAL 124 n 124 VAL 124 B PHE 125 n 125 PHE 125 B PRO 126 n 126 PRO 126 B LEU 127 n 127 LEU 127 B ALA 128 n 128 ALA 128 B PRO 129 n 129 PRO 129 B GLY 130 n 130 GLY 130 B SER 131 n 131 SER 131 B ALA 132 n 132 ALA 132 B ALA 133 n 133 ALA 133 B GLN 134 n 134 GLN 134 B THR 135 n 135 THR 135 B ASN 136 n 136 ASN 136 B SER 137 n 137 SER 137 B MET 138 n 138 MET 138 B VAL 139 n 139 VAL 139 B THR 140 n 140 THR 140 B LEU 141 n 141 LEU 141 B GLY 142 n 142 GLY 142 B CYS 143 n 143 CYS 143 B LEU 144 n 144 LEU 144 B VAL 145 n 145 VAL 145 B LYS 146 n 146 LYS 146 B GLY 147 n 147 GLY 147 B TYR 148 n 148 TYR 148 B PHE 149 n 149 PHE 149 B PRO 150 n 150 PRO 150 B GLU 151 n 151 GLU 151 B PRO 152 n 152 PRO 152 B VAL 153 n 153 VAL 153 B THR 154 n 154 THR 154 B VAL 155 n 155 VAL 155 B THR 156 n 156 THR 156 B TRP 157 n 157 TRP 157 B ASN 158 n 158 ASN 158 B SER 159 n 159 SER 159 B GLY 160 n 160 GLY 160 B SER 161 n 161 SER 161 B LEU 162 n 162 LEU 162 B SER 163 n 163 SER 163 B SER 164 n 164 SER 164 B GLY 165 n 165 GLY 165 B VAL 166 n 166 VAL 166 B HIS 167 n 167 HIS 167 B THR 168 n 168 THR 168 B PHE 169 n 169 PHE 169 B PRO 170 n 170 PRO 170 B ALA 171 n 171 ALA 171 B VAL 172 n 172 VAL 172 B LEU 173 n 173 LEU 173 B GLN 174 n 174 GLN 174 B SER 175 n 175 SER 175 B ASP 176 n 176 ASP 176 B LEU 177 n 177 LEU 177 B TYR 178 n 178 TYR 178 B THR 179 n 179 THR 179 B LEU 180 n 180 LEU 180 B SER 181 n 181 SER 181 B SER 182 n 182 SER 182 B SER 183 n 183 SER 183 B VAL 184 n 184 VAL 184 B THR 185 n 185 THR 185 B VAL 186 n 186 VAL 186 B PRO 187 n 187 PRO 187 B SER 188 n 188 SER 188 B SER 189 n 189 SER 189 B PRO 190 n 190 PRO 190 B ARG 191 n 191 ARG 191 B PRO 192 n 192 PRO 192 B SER 193 n 193 SER 193 B GLU 194 n 194 GLU 194 B THR 195 n 195 THR 195 B VAL 196 n 196 VAL 196 B THR 197 n 197 THR 197 B CYS 198 n 198 CYS 198 B ASN 199 n 199 ASN 199 B VAL 200 n 200 VAL 200 B ALA 201 n 201 ALA 201 B HIS 202 n 202 HIS 202 B PRO 203 n 203 PRO 203 B ALA 204 n 204 ALA 204 B SER 205 n 205 SER 205 B SER 206 n 206 SER 206 B THR 207 n 207 THR 207 B LYS 208 n 208 LYS 208 B VAL 209 n 209 VAL 209 B ASP 210 n 210 ASP 210 B LYS 211 n 211 LYS 211 B LYS 212 n 212 LYS 212 B ILE 213 n 213 ILE 213 B VAL 214 n 214 VAL 214 B PRO 215 n 215 PRO 215 B ARG 216 n 216 ARG 216 B ASP 217 n 217 ASP 217 B CYS 218 n 218 CYS 218 B author_and_software_defined_assembly PISA 2 dimeric 3620 -24 19200 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O THR 5 A O THR 5 A N ARG 24 A N ARG 24 A O VAL 19 A O VAL 19 A N ILE 75 A N ILE 75 A O ASP 70 A O ASP 70 A N SER 67 A N SER 67 A O LEU 11 A O LEU 11 A N LYS 103 A N LYS 103 A O THR 102 A O THR 102 A N TYR 86 A N TYR 86 A O MET 85 A O MET 85 A N GLN 38 A N GLN 38 A O TRP 35 A O TRP 35 A N ILE 48 A N ILE 48 A O THR 114 A O THR 114 A N ASN 137 A N ASN 137 A O ALA 130 A O ALA 130 A N LEU 181 A N LEU 181 A O SER 176 A O SER 176 A N SER 162 A N SER 162 A O SER 153 A O SER 153 A N ILE 150 A N ILE 150 A O ASN 145 A O ASN 145 A N THR 197 A N THR 197 A O TYR 192 A O TYR 192 A N PHE 209 A N PHE 209 B O GLN 3 B O GLN 3 B N THR 25 B N THR 25 B O VAL 18 B O VAL 18 B N LEU 83 B N LEU 83 B O THR 78 B O THR 78 B N ASP 73 B N ASP 73 B O GLU 10 B O GLU 10 B N THR 113 B N THR 113 B O THR 110 B O THR 110 B N TYR 94 B N TYR 94 B O VAL 93 B O VAL 93 B N GLN 39 B N GLN 39 B O ILE 34 B O ILE 34 B N ILE 51 B N ILE 51 B O GLU 50 B O GLU 50 B N TYR 59 B N TYR 59 B O SER 123 B O SER 123 B N LYS 146 B N LYS 146 B O VAL 139 B O VAL 139 B N VAL 186 B N VAL 186 B O THR 154 B O THR 154 B N ALA 201 B N ALA 201 B O CYS 198 B O CYS 198 B N LYS 211 B N LYS 211 1 A A NH1 OD1 ARG ASP 61 82 2.16 1 B B O OG SER SER 137 188 2.19 1 A ARG 24 0.420 SIDE CHAIN 1 A ARG 188 0.129 SIDE CHAIN 1 18.86 2.20 113.40 132.26 A A A CA CB CG ARG ARG ARG 24 24 24 B N 1 -61.11 2.60 111.60 50.49 A A A CB CG CD ARG ARG ARG 24 24 24 B B N 1 18.17 1.10 119.40 137.57 A A A NH1 CZ NH2 ARG ARG ARG 24 24 24 B B B N 1 -50.19 0.50 120.30 70.11 A A A NE CZ NH2 ARG ARG ARG 24 24 24 B B B N 1 13.85 2.20 113.40 127.25 A A A CA CB CG ARG ARG ARG 45 45 45 N 1 15.33 2.30 115.30 130.63 A A A CA CB CG LEU LEU LEU 46 46 46 N 1 -6.90 1.10 119.40 112.50 A A A NH1 CZ NH2 ARG ARG ARG 61 61 61 N 1 4.02 0.50 120.30 124.32 A A A NE CZ NH1 ARG ARG ARG 61 61 61 N 1 13.05 2.00 118.30 131.35 A A A CG CD OE1 GLU GLU GLU 79 79 79 N 1 12.11 1.90 110.30 122.41 A A A N CA CB THR THR THR 80 80 80 N 1 10.75 1.20 123.30 134.05 A A A OE1 CD OE2 GLU GLU GLU 81 81 81 N 1 -6.08 0.90 118.30 112.22 A A A CB CG OD1 ASP ASP ASP 82 82 82 N 1 6.56 0.90 118.30 124.86 A A A CB CG OD2 ASP ASP ASP 82 82 82 N 1 -11.64 1.80 110.60 98.96 A A A N CA CB MET MET MET 85 85 85 N 1 3.23 0.50 120.30 123.53 A A A NE CZ NH1 ARG ARG ARG 96 96 96 N 1 10.19 1.60 122.70 132.89 A A A O C N THR THR LYS 102 102 103 Y 1 11.57 0.50 120.30 131.87 A A A NE CZ NH1 ARG ARG ARG 108 108 108 N 1 -6.41 0.50 120.30 113.89 A A A NE CZ NH2 ARG ARG ARG 108 108 108 N 1 6.12 0.60 121.00 127.12 A A A CB CG CD2 TYR TYR TYR 140 140 140 N 1 -6.22 0.60 121.00 114.78 A A A CB CG CD1 TYR TYR TYR 140 140 140 N 1 -5.49 0.90 118.30 112.81 A A A CB CG OD1 ASP ASP ASP 143 143 143 N 1 5.47 0.90 118.30 123.77 A A A CB CG OD1 ASP ASP ASP 151 151 151 N 1 14.10 1.10 119.40 133.50 A A A NH1 CZ NH2 ARG ARG ARG 188 188 188 B B B N 1 4.39 0.50 120.30 124.69 A A A NE CZ NH1 ARG ARG ARG 188 188 188 A A A N 1 -11.01 0.50 120.30 109.29 A A A NE CZ NH1 ARG ARG ARG 188 188 188 B B B N 1 -5.37 0.50 120.30 114.93 A A A NE CZ NH2 ARG ARG ARG 188 188 188 A A A N 1 -26.38 0.50 120.30 93.92 A A A NE CZ NH2 ARG ARG ARG 188 188 188 B B B N 1 8.19 0.50 120.30 128.49 A A A NE CZ NH1 ARG ARG ARG 211 211 211 N 1 -8.79 0.50 120.30 111.51 A A A NE CZ NH2 ARG ARG ARG 211 211 211 N 1 12.35 1.60 100.20 112.55 B B B CG SD CE MET MET MET 12 12 12 N 1 10.06 1.60 122.70 132.76 B B B O C N MET MET LYS 12 12 13 Y 1 9.30 1.20 123.30 132.60 B B B OE1 CD OE2 GLU GLU GLU 46 46 46 N 1 9.67 1.50 110.10 119.77 B B B CB CA C ALA ALA ALA 79 79 79 N 1 9.77 1.60 100.20 109.97 B B B CG SD CE MET MET MET 81 81 81 B N 1 10.46 1.60 122.70 133.16 B B B O C N SER SER GLU 88 88 89 Y 1 3.66 0.60 121.00 124.66 B B B CB CG CD2 TYR TYR TYR 94 94 94 N 1 -6.11 0.60 121.00 114.89 B B B CB CG CD1 TYR TYR TYR 94 94 94 N 1 6.93 1.10 119.40 126.33 B B B NH1 CZ NH2 ARG ARG ARG 98 98 98 N 1 -4.81 0.50 120.30 115.49 B B B NE CZ NH2 ARG ARG ARG 98 98 98 N 1 -4.76 0.60 121.00 116.24 B B B CB CG CD1 TYR TYR TYR 105 105 105 N 1 14.00 2.30 115.30 129.30 B B B CA CB CG LEU LEU LEU 141 141 141 N 1 -8.09 1.10 102.60 94.51 B B B N CA CB PRO PRO PRO 152 152 152 N 1 -5.77 0.90 118.30 112.53 B B B CB CG OD2 ASP ASP ASP 176 176 176 N 1 11.55 1.90 110.20 121.75 B B B CB CA C LEU LEU LEU 177 177 177 N 1 25.77 2.20 113.40 139.17 B B B CA CB CG ARG ARG ARG 191 191 191 B N 1 -29.76 2.60 111.60 81.84 B B B CB CG CD ARG ARG ARG 191 191 191 B B N 1 -34.24 2.10 111.80 77.56 B B B CG CD NE ARG ARG ARG 191 191 191 B B B N 1 10.98 1.40 123.60 134.58 B B B CD NE CZ ARG ARG ARG 191 191 191 B B B N 1 18.30 1.10 119.40 137.70 B B B NH1 CZ NH2 ARG ARG ARG 191 191 191 B B B N 1 -19.68 0.50 120.30 100.62 B B B NE CZ NH1 ARG ARG ARG 191 191 191 B B B N 1 -3.11 0.50 120.30 117.19 B B B NE CZ NH2 ARG ARG ARG 191 191 191 A A A N 1 -3.96 0.50 120.30 116.34 B B B NE CZ NH2 ARG ARG ARG 216 216 216 N 1 A A CB CG ARG ARG 24 24 0.451 0.027 1.521 1.972 B N 1 A A CG CD ARG ARG 24 24 0.504 0.025 1.515 2.019 B B N 1 A A CD NE ARG ARG 24 24 1.204 0.017 1.460 2.664 B B N 1 A A NE CZ ARG ARG 24 24 0.174 0.013 1.326 1.500 B B N 1 A A CZ NH2 ARG ARG 24 24 -0.148 0.013 1.326 1.178 B B N 1 A A NE CZ ARG ARG 188 188 0.498 0.013 1.326 1.824 B B N 1 A A CZ NH1 ARG ARG 188 188 -0.302 0.013 1.326 1.024 B B N 1 B B CB CG ARG ARG 191 191 0.697 0.027 1.521 2.218 B N 1 B B NE CZ ARG ARG 191 191 -0.366 0.013 1.326 0.960 B B N 1 B B CZ NH1 ARG ARG 191 191 -0.078 0.013 1.326 1.248 B B N 1 B B CZ NH2 ARG ARG 191 191 -0.442 0.013 1.326 0.884 B B N 1 A SER 30 60.78 -121.53 1 A VAL 51 72.97 -54.68 1 A SER 67 165.23 130.59 1 A SER 77 85.35 90.94 1 A ASP 110 -23.86 137.87 1 A ASN 138 40.39 72.56 1 A PRO 141 -66.07 -176.78 1 A ILE 144 -173.10 135.95 1 A SER 171 57.30 15.35 1 B PRO 41 -45.38 103.86 1 B HIS 43 -164.17 25.76 1 B LYS 65 -36.47 -74.03 1 B ALA 92 177.71 175.03 1 B ASP 100 -168.31 27.10 1 B ALA 133 58.41 18.83 1 B ASN 136 176.10 -171.21 1 B LEU 162 -68.02 95.66 1 B SER 188 -60.41 0.46 1 B PRO 190 -53.16 -85.84 27.1 D44.1 IS CRYSTALLIZED AS THE FAB. CHAIN A INCLUDES THE VL AND CL DOMAINS. CHAIN B INCLUDES THE VH AND CH1 DOMAINS. CHAIN B RESIDUES 131 - 136, ASP 217 AND THE C-TERMINAL CYS 218 (ALL IN THE CH1 DOMAIN) HAVE NO ELECTRON DENSITY AND, THEREFORE, THE ATOMIC POSITIONS FOR THESE RESIDUES SHOULD BE CONSIDERED ARBITRARY. 0.274 0.181 2.1 7. 19168 1 2. 2.1 7. 115 3405 0 0 3290 0.016 0.02 0.041 0.03 0.051 0.05 0.861 1.0 1.53 1.5 1.39 1.5 2.2 2.0 0.01 0.02 0.155 0.15 0.21 0.4 0.25 0.4 0.23 0.4 5.4 3.0 21.1 15.0 19.8 20.0 1MLB 26986 0.1 1 4.0 70. data scaling XDS refinement PROLSQ data reduction XDS FAB D44.1 (IGG1,KAPPA) (BALB/C MOUSE, MONOCLONAL ANTIBODY) MONOCLONAL ANTIBODY FAB D44.1 RAISED AGAINST CHICKEN EGG-WHITE LYSOZYME 1 N N 2 N N 3 N N 3 N N A THR 80 A THR 80 HELX_P A ASP 82 A ASP 82 5 1 3 A SER 122 A SER 122 HELX_P A SER 127 A SER 127 1 2 6 A LYS 183 A LYS 183 HELX_P A ARG 188 A ARG 188 1 3 6 B GLU 62 B GLU 62 HELX_P B PHE 64 B PHE 64 5 4 3 B SER 88 B SER 88 HELX_P B ASP 90 B ASP 90 5 5 3 B ASN 158 B ASN 158 HELX_P B GLY 160 B GLY 160 5 6 3 disulf 1.927 A CYS 23 A SG CYS 23 1_555 A CYS 88 A SG CYS 88 1_555 disulf 2.021 A CYS 134 A SG CYS 134 1_555 A CYS 194 A SG CYS 194 1_555 disulf 1.944 B CYS 22 B SG CYS 22 1_555 B CYS 96 B SG CYS 96 1_555 disulf 2.015 B CYS 143 B SG CYS 143 1_555 B CYS 198 B SG CYS 198 1_555 IMMUNE SYSTEM IMMUNOGLOBULIN, IMMUNE SYSTEM A SER 7 A SER 7 1 A PRO 8 A PRO 8 1.34 A TRP 94 A TRP 94 1 A PRO 95 A PRO 95 -2.61 A TYR 140 A TYR 140 1 A PRO 141 A PRO 141 0.05 B PHE 149 B PHE 149 1 B PRO 150 B PRO 150 2.12 B GLU 151 B GLU 151 1 B PRO 152 B PRO 152 0.19 B ARG 191 B ARG 191 1 B PRO 192 B PRO 192 -9.68 KAC_MOUSE UNP 1 1 P01837 ADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYER HNSYTCEATHKTSTSPIVKSFNRNEC PC4202 PIR 2 1 PC4202 EVQLVESGAELMKPGASVKISCKATDYRFSSYWIEWVKQRPGHGLEWIGDILPGSGNTNYNERFKGKATFTADTSSNTAY MQLSSLTSEDSAVYYCAIPDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSS GVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPRDC 1 106 1MLB 109 214 P01837 A 1 109 214 2 214 1MLB 2 218 PC4202 B 2 2 218 2 VAL CONFLICT GLN 5 1MLB B PC4202 PIR 5 5 2 LEU CONFLICT VAL 11 1MLB B PC4202 PIR 11 11 2 ASP CONFLICT GLY 26 1MLB B PC4202 PIR 26 26 2 ARG CONFLICT THR 28 1MLB B PC4202 PIR 28 28 2 SER CONFLICT THR 31 1MLB B PC4202 PIR 31 31 2 ASP CONFLICT GLU 50 1MLB B PC4202 PIR 50 50 2 ASN CONFLICT SER 57 1MLB B PC4202 PIR 57 57 2 ASN CONFLICT TYR 59 1MLB B PC4202 PIR 59 59 2 ARG CONFLICT LYS 63 1MLB B PC4202 PIR 63 63 2 ILE CONFLICT ARG 98 1MLB B PC4202 PIR 98 98 2 PRO CONFLICT GLY 99 1MLB B PC4202 PIR 99 99 2 INSERTION GLY 101 1MLB B PC4202 PIR 101 2 INSERTION ASN 102 1MLB B PC4202 PIR 102 2 INSERTION TYR 103 1MLB B PC4202 PIR 103 2 INSERTION GLY 104 1MLB B PC4202 PIR 104 2 LYS CONFLICT SER 118 1MLB B PC4202 PIR 114 118 2 TYR CONFLICT PHE 125 1MLB B PC4202 PIR 121 125 4 5 4 4 4 6 3 3 anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A LEU 4 A LEU 4 A SER 7 A SER 7 A VAL 19 A VAL 19 A ALA 25 A ALA 25 A ASP 70 A ASP 70 A ILE 75 A ILE 75 A PHE 62 A PHE 62 A SER 67 A SER 67 A THR 10 A THR 10 A VAL 13 A VAL 13 A THR 102 A THR 102 A ILE 106 A ILE 106 A GLY 84 A GLY 84 A GLN 90 A GLN 90 A LEU 33 A LEU 33 A GLN 38 A GLN 38 A ARG 45 A ARG 45 A ILE 48 A ILE 48 A THR 114 A THR 114 A PHE 118 A PHE 118 A GLY 129 A GLY 129 A ASN 137 A ASN 137 A MET 175 A MET 175 A THR 182 A THR 182 A VAL 159 A VAL 159 A TRP 163 A TRP 163 A SER 153 A SER 153 A ARG 155 A ARG 155 A ASN 145 A ASN 145 A ILE 150 A ILE 150 A SER 191 A SER 191 A THR 197 A THR 197 A ILE 205 A ILE 205 A ASN 210 A ASN 210 B GLN 3 B GLN 3 B GLU 6 B GLU 6 B VAL 18 B VAL 18 B THR 25 B THR 25 B THR 78 B THR 78 B LEU 83 B LEU 83 B ALA 68 B ALA 68 B ASP 73 B ASP 73 B GLU 10 B GLU 10 B MET 12 B MET 12 B THR 110 B THR 110 B VAL 114 B VAL 114 B ALA 92 B ALA 92 B ARG 98 B ARG 98 B TRP 33 B TRP 33 B GLN 39 B GLN 39 B GLU 46 B GLU 46 B LEU 52 B LEU 52 B THR 58 B THR 58 B TYR 60 B TYR 60 B SER 123 B SER 123 B LEU 127 B LEU 127 B MET 138 B MET 138 B TYR 148 B TYR 148 B TYR 178 B TYR 178 B PRO 187 B PRO 187 B THR 154 B THR 154 B TRP 157 B TRP 157 B THR 197 B THR 197 B HIS 202 B HIS 202 B THR 207 B THR 207 B LYS 212 B LYS 212 19 P 21 21 21