0.040440 0.000000 0.000000 0.000000 0.022486 0.000000 0.000000 0.000000 0.021631 0.000000 0.000000 0.000000 Prakash, T.P. Manoharan, M. Kawasaki, A.M. Fraser, A.S. Lesnik, E.A. Sioufi, N. Leeds, J.M. Teplova, M. Egli, M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 24.728 44.473 46.229 C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking H2 O 18.015 WATER non-polymer C13 H21 N2 O9 P S 412.353 n 2'-[(METHYLTHIO)ETHYLOXY]-THYMIDINE-5'-MONOPHOSPHATE RNA linking N 1 N O N 2 N P N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 N C N 12 R C Y 13 N N Y 14 N C Y 15 N N Y 16 N C Y 17 N C N 18 N N Y 19 N N Y 20 N C Y 21 N N Y 22 N C N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N O N 38 N P N 39 N O N 40 N O N 41 N O N 42 N C N 43 R C N 44 N O N 45 S C N 46 N O N 47 N C N 48 R C N 49 N N N 50 N C N 51 N O N 52 N N N 53 N C N 54 N N N 55 N C N 56 N C N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N O N 72 N P N 73 N O N 74 N O N 75 N O N 76 N C N 77 R C N 78 N O N 79 S C N 80 N O N 81 N C N 82 R C Y 83 N N Y 84 N C Y 85 N N Y 86 N C N 87 N C N 88 N O N 89 N N N 90 N C N 91 N N N 92 N N Y 93 N C N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N O N 109 N P N 110 N O N 111 N O N 112 N O N 113 N C N 114 R C N 115 N O N 116 S C N 117 N O N 118 N C N 119 R C N 120 N N N 121 N C N 122 N O N 123 N N N 124 N C N 125 N O N 126 N C N 127 N C N 128 N C N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 147 N P N 148 N O N 149 N O N 150 N O N 151 N O N 152 N C N 153 R C N 154 N O N 155 R C N 156 N O N 157 R C N 158 N O N 159 R C N 160 N N N 161 N C N 162 N O N 163 N N N 164 N C N 165 N O N 166 N C N 167 N C N 168 N C N 169 N C N 170 N C N 171 N S N 172 N C N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing Y 24 N sing Y 25 N sing Y 26 N doub N 27 N sing Y 28 N sing Y 29 N sing Y 30 N doub N 31 N sing Y 32 N doub N 33 N sing N 34 N sing Y 35 N sing Y 36 N doub N 37 N sing Y 38 N sing N 39 N sing N 40 N sing N 41 N doub N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N doub N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N doub N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing Y 97 N sing Y 98 N sing Y 99 N doub N 100 N sing Y 101 N sing N 102 N sing Y 103 N doub N 104 N doub N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N doub N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N doub N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N doub N 139 N sing N 140 N sing N 141 N sing N 142 N doub N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N doub N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N doub N 179 N sing N 180 N sing N 181 N sing N 182 N doub N 183 N sing N 184 N sing N 185 N doub N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing US Biochemistry BICHAW 0033 0006-2960 41 11642 11648 10.1021/bi020264t 12269806 2'-O-[2-(Methylthio)ethyl]-Modified Oligonucleotide: An Analogue of 2'-O-[2-(Methoxy)-ethyl]-Modified Oligonucleotide with Improved Protein Binding Properties and High Binding Affinity to Target RNA 2002 10.2210/pdb1mlx/pdb pdb_00001mlx 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 110 1 CCD 1999-12-17 MARRESEARCH graphite SINGLE WAVELENGTH M x-ray 1 1.0000 1.0 5ID-B APS 1.0000 SYNCHROTRON APS BEAMLINE 5ID-B Self-complementary DNA Decamer with a 2'-O-[2-(Methylthio)ethyl]-Modified Thymine (SMT) at Position 6 3135.150 5'-D(*GP*CP*GP*TP*AP*SMTP*AP*CP*GP*C)-3' 2 syn polymer 18.015 water 146 nat water no yes (DG)(DC)(DG)(DT)(DA)(SMT)(DA)(DC)(DG)(DC) GCGTATACGC A,B polydeoxyribonucleotide n n n n n n n n n n 1 1.95 36.84 VAPOR DIFFUSION, HANGING DROP 7.0 sodium cacodylate, potassium chloride, spermine tetrahydrochloride, 2-methyl-2,4-pentanediol (MPD), pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K 293 sodium cacodylate 1 KCl 1 spermine tetrahydrochloride 1 MPD 1 KCl 2 MPD 2 2.940 1 19 A 1 B 120 -1.535 A_DG1:DC120_B 1 -5.135 -0.280 0.135 -0.127 5.391 1 19 A 2 B 119 0.313 A_DC2:DG119_B 2 -14.345 0.077 0.058 -0.055 -6.712 1 19 A 3 B 118 0.067 A_DG3:DC118_B 3 -14.861 -0.303 0.120 -0.128 -6.092 1 20 A 4 B 117 -0.356 A_DT4:DA117_B 4 -16.398 -0.088 0.066 -0.085 -2.801 1 20 A 5 B 116 -4.462 A_DA5:SMT116_B 5 -14.848 0.150 0.135 -0.087 4.419 1 20 A 6 B 115 7.887 A_SMT6:DA115_B 6 -16.386 0.023 0.237 -0.043 4.220 1 20 A 7 B 114 3.884 A_DA7:DT114_B 7 -12.277 0.026 0.048 -0.122 8.864 1 19 A 8 B 113 -0.967 A_DC8:DG113_B 8 -12.987 0.216 -0.088 -0.176 -7.901 1 19 A 9 B 112 1.479 A_DG9:DC112_B 9 -8.635 -0.148 -0.135 -0.133 -3.607 1 19 A 10 B 111 0.060 A_DC10:DG111_B 10 5.922 0.178 0.130 -0.114 3.285 38.592 A A 1 2 -0.440 B B 120 119 3.261 -0.291 0.332 -1.474 AA_DG1DC2:DG119DC120_BB 1 2.030 -3.072 38.539 -2.195 -0.251 2.358 27.950 A A 2 3 22.608 B B 119 118 3.416 10.654 0.238 -2.156 AA_DC2DG3:DC118DG119_BB 2 -0.203 0.431 25.877 -6.788 -0.537 3.034 37.306 A A 3 4 7.551 B B 118 117 3.196 4.816 -1.117 -1.510 AA_DG3DT4:DA117DC118_BB 3 -1.928 3.023 36.957 -2.969 1.502 1.650 31.618 A A 4 5 36.641 B B 117 116 3.107 18.699 0.613 -1.563 AA_DT4DA5:SMT116DA117_BB 4 2.069 -4.054 25.527 -5.672 -0.814 2.839 33.285 A A 5 6 9.689 B B 116 115 3.060 5.524 1.054 -1.353 AA_DA5SMT6:DA115SMT116_BB 5 1.286 -2.256 32.811 -3.199 -1.645 2.169 33.857 A A 6 7 26.516 B B 115 114 3.072 14.938 -0.339 -1.390 AA_SMT6DA7:DT114DA115_BB 6 0.397 -0.704 30.468 -4.425 0.637 3.026 29.780 A A 7 8 6.491 B B 114 113 3.251 3.329 -0.004 -1.878 AA_DA7DC8:DG113DT114_BB 7 0.288 -0.561 29.596 -4.324 0.066 2.591 32.130 A A 8 9 22.835 B B 113 112 3.593 12.330 -0.303 -1.962 AA_DC8DG9:DC112DG113_BB 8 0.324 -0.599 29.726 -5.719 0.605 3.246 34.445 A A 9 10 2.062 B B 112 111 3.308 1.221 0.151 -1.685 AA_DG9DC10:DG111DC112_BB 9 -0.450 0.759 34.421 -3.036 -0.326 software chem_comp_atom chem_comp_bond database_2 struct_conn repository Initial release Version format compliance Version format compliance Refinement description Data collection Database references Derived calculations 1 0 2002-12-04 1 1 2008-04-28 1 2 2011-07-13 1 3 2017-10-11 1 4 2024-02-14 _software.classification _software.name _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id RCSB Y RCSB 2002-08-31 REL REL HOH water solid phase oligonucleotide synthesis sample TIP 701 2 HOH HOH 701 A TIP 702 2 HOH HOH 702 A TIP 704 2 HOH HOH 704 A TIP 705 2 HOH HOH 705 A TIP 707 2 HOH HOH 707 A TIP 708 2 HOH HOH 708 A TIP 709 2 HOH HOH 709 A TIP 710 2 HOH HOH 710 A TIP 711 2 HOH HOH 711 A TIP 712 2 HOH HOH 712 A TIP 714 2 HOH HOH 714 A TIP 715 2 HOH HOH 715 A TIP 716 2 HOH HOH 716 A TIP 718 2 HOH HOH 718 A TIP 721 2 HOH HOH 721 A TIP 722 2 HOH HOH 722 A TIP 723 2 HOH HOH 723 A TIP 724 2 HOH HOH 724 A TIP 725 2 HOH HOH 725 A TIP 729 2 HOH HOH 729 A TIP 730 2 HOH HOH 730 A TIP 732 2 HOH HOH 732 A TIP 734 2 HOH HOH 734 A TIP 735 2 HOH HOH 735 A TIP 737 2 HOH HOH 737 A TIP 739 2 HOH HOH 739 A TIP 741 2 HOH HOH 741 A TIP 745 2 HOH HOH 745 A TIP 746 2 HOH HOH 746 A TIP 751 2 HOH HOH 751 A TIP 753 2 HOH HOH 753 A TIP 756 2 HOH HOH 756 A TIP 761 2 HOH HOH 761 A TIP 762 2 HOH HOH 762 A TIP 767 2 HOH HOH 767 A TIP 771 2 HOH HOH 771 A TIP 772 2 HOH HOH 772 A TIP 776 2 HOH HOH 776 A TIP 784 2 HOH HOH 784 A TIP 789 2 HOH HOH 789 A TIP 793 2 HOH HOH 793 A TIP 800 2 HOH HOH 800 A TIP 802 2 HOH HOH 802 A TIP 806 2 HOH HOH 806 A TIP 807 2 HOH HOH 807 A TIP 809 2 HOH HOH 809 A TIP 810 2 HOH HOH 810 A TIP 813 2 HOH HOH 813 A TIP 814 2 HOH HOH 814 A TIP 817 2 HOH HOH 817 A TIP 818 2 HOH HOH 818 A TIP 820 2 HOH HOH 820 A TIP 823 2 HOH HOH 823 A TIP 825 2 HOH HOH 825 A TIP 829 2 HOH HOH 829 A TIP 831 2 HOH HOH 831 A TIP 837 2 HOH HOH 837 A TIP 840 2 HOH HOH 840 A TIP 841 2 HOH HOH 841 A TIP 846 2 HOH HOH 846 A TIP 854 2 HOH HOH 854 A TIP 864 2 HOH HOH 864 A TIP 869 2 HOH HOH 869 A TIP 874 2 HOH HOH 874 A TIP 883 2 HOH HOH 883 A TIP 884 2 HOH HOH 884 A TIP 885 2 HOH HOH 885 A TIP 891 2 HOH HOH 891 A TIP 892 2 HOH HOH 892 A TIP 896 2 HOH HOH 896 A TIP 898 2 HOH HOH 898 A TIP 899 2 HOH HOH 899 A TIP 900 2 HOH HOH 900 A TIP 901 2 HOH HOH 901 A TIP 903 2 HOH HOH 903 A TIP 906 2 HOH HOH 906 A TIP 907 2 HOH HOH 907 A TIP 908 2 HOH HOH 908 A TIP 909 2 HOH HOH 909 A TIP 911 2 HOH HOH 911 A TIP 913 2 HOH HOH 913 A TIP 915 2 HOH HOH 915 A TIP 916 2 HOH HOH 916 A TIP 1001 2 HOH HOH 1001 A TIP 700 2 HOH HOH 700 B TIP 703 2 HOH HOH 703 B TIP 706 2 HOH HOH 706 B TIP 713 2 HOH HOH 713 B TIP 717 2 HOH HOH 717 B TIP 719 2 HOH HOH 719 B TIP 720 2 HOH HOH 720 B TIP 726 2 HOH HOH 726 B TIP 728 2 HOH HOH 728 B TIP 731 2 HOH HOH 731 B TIP 733 2 HOH HOH 733 B TIP 736 2 HOH HOH 736 B TIP 738 2 HOH HOH 738 B TIP 742 2 HOH HOH 742 B TIP 743 2 HOH HOH 743 B TIP 747 2 HOH HOH 747 B TIP 749 2 HOH HOH 749 B TIP 750 2 HOH HOH 750 B TIP 763 2 HOH HOH 763 B TIP 775 2 HOH HOH 775 B TIP 777 2 HOH HOH 777 B TIP 778 2 HOH HOH 778 B TIP 781 2 HOH HOH 781 B TIP 782 2 HOH HOH 782 B TIP 787 2 HOH HOH 787 B TIP 794 2 HOH HOH 794 B TIP 798 2 HOH HOH 798 B TIP 799 2 HOH HOH 799 B TIP 801 2 HOH HOH 801 B TIP 803 2 HOH HOH 803 B TIP 804 2 HOH HOH 804 B TIP 805 2 HOH HOH 805 B TIP 811 2 HOH HOH 811 B TIP 815 2 HOH HOH 815 B TIP 822 2 HOH HOH 822 B TIP 828 2 HOH HOH 828 B TIP 830 2 HOH HOH 830 B TIP 839 2 HOH HOH 839 B TIP 842 2 HOH HOH 842 B TIP 850 2 HOH HOH 850 B TIP 860 2 HOH HOH 860 B TIP 863 2 HOH HOH 863 B TIP 867 2 HOH HOH 867 B TIP 872 2 HOH HOH 872 B TIP 873 2 HOH HOH 873 B TIP 878 2 HOH HOH 878 B TIP 882 2 HOH HOH 882 B TIP 886 2 HOH HOH 886 B TIP 887 2 HOH HOH 887 B TIP 888 2 HOH HOH 888 B TIP 889 2 HOH HOH 889 B TIP 890 2 HOH HOH 890 B TIP 893 2 HOH HOH 893 B TIP 894 2 HOH HOH 894 B TIP 895 2 HOH HOH 895 B TIP 897 2 HOH HOH 897 B TIP 904 2 HOH HOH 904 B TIP 905 2 HOH HOH 905 B TIP 910 2 HOH HOH 910 B TIP 917 2 HOH HOH 917 B TIP 918 2 HOH HOH 918 B TIP 919 2 HOH HOH 919 B GUA 1 n 1 DG 1 A CYT 2 n 2 DC 2 A GUA 3 n 3 DG 3 A THY 4 n 4 DT 4 A ADE 5 n 5 DA 5 A MSE 6 n 6 SMT 6 A ADE 7 n 7 DA 7 A CYT 8 n 8 DC 8 A GUA 9 n 9 DG 9 A CYT 10 n 10 DC 10 A GUA 111 n 1 DG 111 B CYT 112 n 2 DC 112 B GUA 113 n 3 DG 113 B THY 114 n 4 DT 114 B ADE 115 n 5 DA 115 B MSE 116 n 6 SMT 116 B ADE 117 n 7 DA 117 B CYT 118 n 8 DC 118 B GUA 119 n 9 DG 119 B CYT 120 n 10 DC 120 B author_defined_assembly 2 dimeric A SMT 6 A SMT 6 T B SMT 116 B SMT 6 T 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A CB SMT 6 A CB SMT 6 1 Y 1 A SC SMT 6 A SC SMT 6 1 Y 1 A CD SMT 6 A CD SMT 6 1 Y 1 A A O O HOH HOH 793 864 1.96 1 B B O O HOH HOH 775 822 2.09 1 B B O O HOH HOH 777 863 2.15 1 -4.75 0.60 125.10 120.35 A A A C6 N1 C2 DG DG DG 1 1 1 N 1 4.35 0.60 123.90 128.25 A A A N1 C2 N3 DG DG DG 1 1 1 N 1 -3.18 0.50 128.60 125.42 A A A N3 C4 C5 DG DG DG 1 1 1 N 1 -3.85 0.50 104.30 100.45 A A A C5 N7 C8 DG DG DG 1 1 1 N 1 3.42 0.50 113.10 116.52 A A A N7 C8 N9 DG DG DG 1 1 1 N 1 8.49 1.20 119.70 128.19 A A A C3' O3' P DG DG DC 1 1 2 Y 1 -4.23 0.70 108.00 103.77 A A A O4' C1' N9 DG DG DG 3 3 3 N 1 -4.75 0.60 125.10 120.35 A A A C6 N1 C2 DG DG DG 3 3 3 N 1 5.95 0.60 123.90 129.85 A A A N1 C2 N3 DG DG DG 3 3 3 N 1 -3.61 0.50 111.90 108.29 A A A C2 N3 C4 DG DG DG 3 3 3 N 1 -3.43 0.50 113.10 109.67 A A A N7 C8 N9 DG DG DG 3 3 3 N 1 2.79 0.40 106.40 109.19 A A A C8 N9 C4 DG DG DG 3 3 3 N 1 -4.61 0.50 129.30 124.69 A A A N1 C2 N3 DA DA DA 5 5 5 N 1 3.16 0.50 103.90 107.06 A A A C5 N7 C8 DA DA DA 5 5 5 N 1 -3.27 0.50 113.80 110.53 A A A N7 C8 N9 DA DA DA 5 5 5 N 1 3.77 0.60 118.60 122.37 A A A C6 N1 C2 DA DA DA 7 7 7 N 1 -3.70 0.40 104.50 100.80 A A A O4' C4' C3' DC DC DC 8 8 8 N 1 3.00 0.50 106.80 109.80 A A A O4' C1' C2' DG DG DG 9 9 9 N 1 -6.05 0.60 125.10 119.05 A A A C6 N1 C2 DG DG DG 9 9 9 N 1 7.85 0.60 123.90 131.75 A A A N1 C2 N3 DG DG DG 9 9 9 N 1 -5.82 0.70 119.90 114.08 A A A N3 C2 N2 DG DG DG 9 9 9 N 1 -4.76 0.60 119.90 115.14 A A A N1 C6 O6 DG DG DG 9 9 9 N 1 3.60 0.60 128.60 132.20 A A A C5 C6 O6 DG DG DG 9 9 9 N 1 -4.78 0.70 108.00 103.22 B B B O4' C1' N9 DG DG DG 111 111 111 N 1 -4.11 0.60 123.90 119.79 B B B N1 C2 N3 DG DG DG 111 111 111 N 1 4.98 0.50 111.90 116.88 B B B C2 N3 C4 DG DG DG 111 111 111 N 1 -3.76 0.60 130.40 126.64 B B B C6 C5 N7 DG DG DG 111 111 111 N 1 -5.69 0.40 120.30 114.61 B B B C6 N1 C2 DC DC DC 112 112 112 N 1 -4.06 0.50 117.40 113.34 B B B C4 C5 C6 DC DC DC 112 112 112 N 1 6.10 0.50 121.00 127.10 B B B C5 C6 N1 DC DC DC 112 112 112 N 1 -3.07 0.40 104.50 101.43 B B B O4' C4' C3' DG DG DG 113 113 113 N 1 3.46 0.50 113.10 116.56 B B B N7 C8 N9 DG DG DG 113 113 113 N 1 -2.74 0.40 106.40 103.66 B B B C8 N9 C4 DG DG DG 113 113 113 N 1 -2.81 0.40 104.50 101.69 B B B O4' C4' C3' DT DT DT 114 114 114 N 1 4.56 0.60 123.70 128.26 B B B C5 C6 N1 DT DT DT 114 114 114 N 1 3.02 0.40 105.80 108.82 B B B C8 N9 C4 DA DA DA 117 117 117 N 1 -2.44 0.40 105.80 103.36 B B B N9 C4 C5 DA DA DA 117 117 117 N 1 10.64 1.60 120.90 131.54 B B B P O5' C5' DG DG DG 119 119 119 N 1 A A C4 C5 DC DC 2 2 0.050 0.008 1.425 1.475 N 1 A A O4' C1' DG DG 3 3 0.082 0.011 1.420 1.502 N 1 A A C5 C7 DT DT 4 4 -0.047 0.006 1.496 1.449 N 1 A A N1 C2 DA DA 5 5 0.059 0.009 1.339 1.398 N 1 A A C6 N1 DA DA 7 7 -0.044 0.007 1.351 1.307 N 1 A A C4 N4 DC DC 8 8 -0.060 0.009 1.335 1.275 N 1 A A C5 C6 DC DC 8 8 -0.064 0.008 1.339 1.275 N 1 A A C6 N1 DG DG 9 9 0.048 0.007 1.391 1.439 N 1 A A C2 O2 DC DC 10 10 -0.056 0.009 1.240 1.184 N 1 A A C2 N3 DC DC 10 10 0.050 0.008 1.353 1.403 N 1 B B N3 C4 DG DG 111 111 -0.046 0.007 1.350 1.304 N 1 B B C8 N9 DG DG 111 111 0.062 0.007 1.374 1.436 N 1 B B C2 N3 DG DG 113 113 -0.048 0.008 1.323 1.275 N 1 B B C5 C6 DT DT 114 114 -0.069 0.007 1.339 1.270 N 1 B B N1 C2 DA DA 115 115 -0.070 0.009 1.339 1.269 N 1 B B C6 N1 DA DA 117 117 0.046 0.007 1.351 1.397 N 1 B B N7 C8 DA DA 117 117 0.046 0.007 1.311 1.357 N 1 B B C2' C1' DG DG 119 119 -0.067 0.010 1.518 1.451 N 1 B B C5 N7 DG DG 119 119 0.039 0.006 1.388 1.427 N 1 B B C4 C5 DC DC 120 120 0.050 0.008 1.425 1.475 N 0.141 0.137 1.25 15.0 14054 12784 1 4.0 2.0 MOLECULAR REPLACEMENT 1.25 15.0 146 781 0 635 0 0.029 0.034 0.141 1.25 20.0 1MLX 14088 12796 4.0 2.0 0.03 1 95.9 0.313 1.25 1.29 1341 93.6 data scaling XDS data scaling SCALEPACK phasing AMoRE refinement SHELXL-97 data reduction XDS Crystal Structure Analysis of a 2'-O-[2-(Methylthio)-ethyl]-Modified Oligodeoxynucleotide Duplex 1 N N 1 N N 2 N N 2 N N covale 1.614 both A DA 5 A O3' DA 5 1_555 A SMT 6 A P SMT 6 1_555 covale 1.606 both A SMT 6 A O3' SMT 6 1_555 A DA 7 A P DA 7 1_555 covale 1.595 both B DA 115 B O3' DA 5 1_555 B SMT 116 B P SMT 6 1_555 covale 1.619 both B SMT 116 B O3' SMT 6 1_555 B DA 117 B P DA 7 1_555 hydrog WATSON-CRICK A DG 1 A N1 DG 1 1_555 B DC 120 B N3 DC 10 1_555 hydrog WATSON-CRICK A DG 1 A N2 DG 1 1_555 B DC 120 B O2 DC 10 1_555 hydrog WATSON-CRICK A DG 1 A O6 DG 1 1_555 B DC 120 B N4 DC 10 1_555 hydrog WATSON-CRICK A DC 2 A N3 DC 2 1_555 B DG 119 B N1 DG 9 1_555 hydrog WATSON-CRICK A DC 2 A N4 DC 2 1_555 B DG 119 B O6 DG 9 1_555 hydrog WATSON-CRICK A DC 2 A O2 DC 2 1_555 B DG 119 B N2 DG 9 1_555 hydrog WATSON-CRICK A DG 3 A N1 DG 3 1_555 B DC 118 B N3 DC 8 1_555 hydrog WATSON-CRICK A DG 3 A N2 DG 3 1_555 B DC 118 B O2 DC 8 1_555 hydrog WATSON-CRICK A DG 3 A O6 DG 3 1_555 B DC 118 B N4 DC 8 1_555 hydrog WATSON-CRICK A DT 4 A N3 DT 4 1_555 B DA 117 B N1 DA 7 1_555 hydrog WATSON-CRICK A DT 4 A O4 DT 4 1_555 B DA 117 B N6 DA 7 1_555 hydrog WATSON-CRICK A DA 5 A N1 DA 5 1_555 B SMT 116 B N3 SMT 6 1_555 hydrog WATSON-CRICK A DA 5 A N6 DA 5 1_555 B SMT 116 B O4 SMT 6 1_555 hydrog WATSON-CRICK A SMT 6 A N3 SMT 6 1_555 B DA 115 B N1 DA 5 1_555 hydrog WATSON-CRICK A SMT 6 A O4 SMT 6 1_555 B DA 115 B N6 DA 5 1_555 hydrog WATSON-CRICK A DA 7 A N1 DA 7 1_555 B DT 114 B N3 DT 4 1_555 hydrog WATSON-CRICK A DA 7 A N6 DA 7 1_555 B DT 114 B O4 DT 4 1_555 hydrog WATSON-CRICK A DC 8 A N3 DC 8 1_555 B DG 113 B N1 DG 3 1_555 hydrog WATSON-CRICK A DC 8 A N4 DC 8 1_555 B DG 113 B O6 DG 3 1_555 hydrog WATSON-CRICK A DC 8 A O2 DC 8 1_555 B DG 113 B N2 DG 3 1_555 hydrog WATSON-CRICK A DG 9 A N1 DG 9 1_555 B DC 112 B N3 DC 2 1_555 hydrog WATSON-CRICK A DG 9 A N2 DG 9 1_555 B DC 112 B O2 DC 2 1_555 hydrog WATSON-CRICK A DG 9 A O6 DG 9 1_555 B DC 112 B N4 DC 2 1_555 hydrog WATSON-CRICK A DC 10 A N3 DC 10 1_555 B DG 111 B N1 DG 1 1_555 hydrog WATSON-CRICK A DC 10 A N4 DC 10 1_555 B DG 111 B O6 DG 1 1_555 hydrog WATSON-CRICK A DC 10 A O2 DC 10 1_555 B DG 111 B N2 DG 1 1_555 DNA DNA, DOUBLE HELIX, A-FORM, ANTISENSE MODIFICATION, NUCLEIC ACID ANALOGUE, RNA AFFINITY, NUCLEASE RESISTANCE, PROTEIN BINDING AFFINITY, HIGH RESOLUTION STRUCTURE, HYDRATION 1MLX PDB 1 1MLX 1 10 1MLX 1 10 1MLX A 1 1 10 111 120 1MLX 111 120 1MLX B 1 1 10 19 P 21 21 21