1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Kwan, A.H.Y.
Gell, D.A.
Verger, A.
Crossley, M.
Matthews, J.M.
Mackay, J.P.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
O
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
N
N
58
R
C
N
59
N
C
N
60
N
O
N
61
N
C
N
62
N
S
N
63
N
O
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
N
N
72
S
C
N
73
N
C
N
74
N
O
N
75
N
C
N
76
N
C
N
77
N
C
N
78
N
O
N
79
N
N
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
N
N
92
S
C
N
93
N
C
N
94
N
O
N
95
N
C
N
96
N
C
N
97
N
C
N
98
N
O
N
99
N
O
N
100
N
O
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
N
N
111
N
C
N
112
N
C
N
113
N
O
N
114
N
O
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
N
N
121
S
C
N
122
N
C
N
123
N
O
N
124
N
C
Y
125
N
C
Y
126
N
N
Y
127
N
C
Y
128
N
C
Y
129
N
N
N
130
N
O
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
N
N
142
S
C
N
143
N
C
N
144
N
O
N
145
S
C
N
146
N
C
N
147
N
C
N
148
N
C
N
149
N
O
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
N
N
164
S
C
N
165
N
C
N
166
N
O
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
C
N
171
N
O
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
N
N
186
S
C
N
187
N
C
N
188
N
O
N
189
N
C
N
190
N
C
N
191
N
C
N
192
N
C
N
193
N
N
N
194
N
O
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
N
N
211
S
C
N
212
N
C
N
213
N
O
N
214
N
C
N
215
N
C
N
216
N
S
N
217
N
C
N
218
N
O
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
Y
235
N
C
Y
236
N
C
Y
237
N
C
Y
238
N
C
Y
239
N
C
Y
240
N
C
N
241
N
O
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
N
N
254
S
C
N
255
N
C
N
256
N
O
N
257
N
C
N
258
N
C
N
259
N
C
N
260
N
O
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
N
N
271
S
C
N
272
N
C
N
273
N
O
N
274
N
C
N
275
N
O
N
276
N
O
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
N
N
285
S
C
N
286
N
C
N
287
N
O
N
288
R
C
N
289
N
O
N
290
N
C
N
291
N
O
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
N
N
302
S
C
N
303
N
C
N
304
N
O
N
305
N
C
Y
306
N
C
Y
307
N
C
Y
308
N
C
Y
309
N
N
Y
310
N
C
Y
311
N
C
Y
312
N
C
Y
313
N
C
Y
314
N
C
N
315
N
O
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
N
N
329
S
C
N
330
N
C
N
331
N
O
N
332
N
C
Y
333
N
C
Y
334
N
C
Y
335
N
C
Y
336
N
C
Y
337
N
C
Y
338
N
C
N
339
N
O
N
340
N
O
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
N
N
353
S
C
N
354
N
C
N
355
N
O
N
356
N
C
N
357
N
C
N
358
N
C
N
359
N
O
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
ZN
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
doub
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
doub
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
doub
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
doub
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
doub
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
doub
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
Y
124
N
sing
Y
125
N
doub
Y
126
N
doub
N
127
N
sing
Y
128
N
sing
N
129
N
sing
Y
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
doub
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
doub
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
doub
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
doub
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
doub
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
Y
230
N
doub
Y
231
N
sing
Y
232
N
sing
N
233
N
sing
Y
234
N
doub
N
235
N
sing
Y
236
N
doub
N
237
N
sing
Y
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
doub
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
doub
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
doub
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
Y
299
N
doub
Y
300
N
sing
Y
301
N
sing
N
302
N
sing
Y
303
N
doub
Y
304
N
sing
Y
305
N
sing
N
306
N
sing
Y
307
N
sing
Y
308
N
doub
N
309
N
sing
Y
310
N
doub
N
311
N
sing
Y
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
doub
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
Y
327
N
doub
Y
328
N
sing
Y
329
N
sing
N
330
N
sing
Y
331
N
doub
N
332
N
sing
Y
333
N
doub
N
334
N
sing
Y
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
doub
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
UK
structure
STRUE6
2005
0969-2126
11
803
813
10.1016/S0969-2126(03)00122-9
12842043
Engineering a Protein Scaffold from a PHD Finger
2003
10.2210/pdb1mm3/pdb
pdb_00001mm3
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
the C-terminal loop (residue 37-49) was replaced by corresponding loop from WSTF.
6774.832
Mi2-beta(Chromodomain helicase-DNA-binding protein 4) and transcription factor WSTF
residues 1-61
1
man
polymer
65.409
ZINC ION
2
syn
non-polymer
no
no
GPLGSDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLRPALYEVPDGEWQCPRCTCPALKGK
GPLGSDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLRPALYEVPDGEWQCPRCTCPALKGK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
Escherichia coli
sample
CHD4
9606
Homo sapiens
469008
Escherichia coli BL21(DE3)
BL21 (DE3)
PLASMID
pGEX-6P
database_2
pdbx_nmr_software
pdbx_struct_assembly
pdbx_struct_conn_angle
pdbx_struct_oper_list
struct_conn
struct_ref_seq_dif
struct_site
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Data collection
1
0
2003-07-22
1
1
2008-04-28
1
2
2011-07-13
1
3
2022-02-23
1
4
2024-05-29
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
1MM2 contains the 2nd PHD domain from Mi2b
1FP0 contains PHD domain from KAP-1
1F62 contains PHD domain from WSTF
RCSB
Y
PDBJ
2002-09-02
REL
REL
ZN
ZINC ION
This structure was determined mostly using standard 2D homonuclear techniques
structures with the lowest energy
500
20
2D NOESY
2D TOCSY
DQF-COSY
150mM NaCl
7.5
ambient
298
K
Structure calculations were performed using the package ARIA1.1 (Ambiguous Restraints in Iterative Assignment). Final structures are based on 968 unambiguous NOE-derived distance constraints, 90 sets of ambiguous NOE-derived distance constraints and 37 additional dihedral angle restraints.
simulated annealing, molecular dynamics, torsion angle dynamics
1
lowest energy
1mM Mi2-phd2-L2wstf protein, 1mM DTT, 10mM sodium phosphate buffer (pH 7.5), 150mM NaCl, 95% H2O, 5% D2O
95% H2O/5% D2O
Bruker
processing
XwinNMR
2.5
Bartels et al
data analysis
XEASY
1.3.13
Guntert et al
refinement
DYANA
1.5
Linge et al
structure solution
ARIA
1.1.2
600
Bruker
DRX
ZN
62
2
ZN
ZN
62
A
ZN
63
2
ZN
ZN
63
A
GLY
1
n
1
GLY
1
A
PRO
2
n
2
PRO
2
A
LEU
3
n
3
LEU
3
A
GLY
4
n
4
GLY
4
A
SER
5
n
5
SER
5
A
ASP
6
n
6
ASP
6
A
HIS
7
n
7
HIS
7
A
HIS
8
n
8
HIS
8
A
MET
9
n
9
MET
9
A
GLU
10
n
10
GLU
10
A
PHE
11
n
11
PHE
11
A
CYS
12
n
12
CYS
12
A
ARG
13
n
13
ARG
13
A
VAL
14
n
14
VAL
14
A
CYS
15
n
15
CYS
15
A
LYS
16
n
16
LYS
16
A
ASP
17
n
17
ASP
17
A
GLY
18
n
18
GLY
18
A
GLY
19
n
19
GLY
19
A
GLU
20
n
20
GLU
20
A
LEU
21
n
21
LEU
21
A
LEU
22
n
22
LEU
22
A
CYS
23
n
23
CYS
23
A
CYS
24
n
24
CYS
24
A
ASP
25
n
25
ASP
25
A
THR
26
n
26
THR
26
A
CYS
27
n
27
CYS
27
A
PRO
28
n
28
PRO
28
A
SER
29
n
29
SER
29
A
SER
30
n
30
SER
30
A
TYR
31
n
31
TYR
31
A
HIS
32
n
32
HIS
32
A
ILE
33
n
33
ILE
33
A
HIS
34
n
34
HIS
34
A
CYS
35
n
35
CYS
35
A
LEU
36
n
36
LEU
36
A
ARG
37
n
37
ARG
37
A
PRO
38
n
38
PRO
38
A
ALA
39
n
39
ALA
39
A
LEU
40
n
40
LEU
40
A
TYR
41
n
41
TYR
41
A
GLU
42
n
42
GLU
42
A
VAL
43
n
43
VAL
43
A
PRO
44
n
44
PRO
44
A
ASP
45
n
45
ASP
45
A
GLY
46
n
46
GLY
46
A
GLU
47
n
47
GLU
47
A
TRP
48
n
48
TRP
48
A
GLN
49
n
49
GLN
49
A
CYS
50
n
50
CYS
50
A
PRO
51
n
51
PRO
51
A
ARG
52
n
52
ARG
52
A
CYS
53
n
53
CYS
53
A
THR
54
n
54
THR
54
A
CYS
55
n
55
CYS
55
A
PRO
56
n
56
PRO
56
A
ALA
57
n
57
ALA
57
A
LEU
58
n
58
LEU
58
A
LYS
59
n
59
LYS
59
A
GLY
60
n
60
GLY
60
A
LYS
61
n
61
LYS
61
A
author_defined_assembly
1
monomeric
A
CYS
12
A
SG
CYS
12
1_555
A
ZN
63
C
ZN
ZN
1_555
A
CYS
15
A
SG
CYS
15
1_555
109.5
A
CYS
12
A
SG
CYS
12
1_555
A
ZN
63
C
ZN
ZN
1_555
A
HIS
32
A
ND1
HIS
32
1_555
108.3
A
CYS
15
A
SG
CYS
15
1_555
A
ZN
63
C
ZN
ZN
1_555
A
HIS
32
A
ND1
HIS
32
1_555
113.9
A
CYS
12
A
SG
CYS
12
1_555
A
ZN
63
C
ZN
ZN
1_555
A
CYS
35
A
SG
CYS
35
1_555
109.5
A
CYS
15
A
SG
CYS
15
1_555
A
ZN
63
C
ZN
ZN
1_555
A
CYS
35
A
SG
CYS
35
1_555
106.1
A
HIS
32
A
ND1
HIS
32
1_555
A
ZN
63
C
ZN
ZN
1_555
A
CYS
35
A
SG
CYS
35
1_555
109.4
A
CYS
24
A
SG
CYS
24
1_555
A
ZN
62
B
ZN
ZN
1_555
A
CYS
27
A
SG
CYS
27
1_555
109.5
A
CYS
24
A
SG
CYS
24
1_555
A
ZN
62
B
ZN
ZN
1_555
A
CYS
50
A
SG
CYS
50
1_555
109.6
A
CYS
27
A
SG
CYS
27
1_555
A
ZN
62
B
ZN
ZN
1_555
A
CYS
50
A
SG
CYS
50
1_555
108.5
A
CYS
24
A
SG
CYS
24
1_555
A
ZN
62
B
ZN
ZN
1_555
A
CYS
53
A
SG
CYS
53
1_555
111.0
A
CYS
27
A
SG
CYS
27
1_555
A
ZN
62
B
ZN
ZN
1_555
A
CYS
53
A
SG
CYS
53
1_555
108.2
A
CYS
50
A
SG
CYS
50
1_555
A
ZN
62
B
ZN
ZN
1_555
A
CYS
53
A
SG
CYS
53
1_555
110.0
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LEU
22
A
N
LEU
22
A
O
TYR
31
A
O
TYR
31
1
A
A
HG
OD2
CYS
ASP
12
17
1.52
2
A
A
HG
O
CYS
CYS
12
15
1.50
3
A
A
HG
ZN
CYS
ZN
12
63
1.41
4
A
A
HG
ZN
CYS
ZN
12
63
1.32
6
A
A
HG
ZN
CYS
ZN
12
63
1.31
7
A
A
HH21
HB3
ARG
CYS
13
53
1.13
8
A
A
HB3
HE1
ASP
HIS
17
32
1.26
8
A
A
HG
ZN
CYS
ZN
12
63
1.45
9
A
A
HG
ZN
CYS
ZN
12
63
1.44
10
A
A
HG
O
CYS
CYS
12
15
1.53
11
A
A
HB3
HE1
ASP
HIS
17
32
1.26
12
A
A
HG
OD1
CYS
ASP
12
17
1.52
13
A
A
HG
ZN
CYS
ZN
12
63
1.36
14
A
A
HG
ZN
CYS
ZN
12
63
1.29
15
A
A
HA
HA
CYS
GLN
24
49
1.28
15
A
A
HG
OD1
CYS
ASP
12
17
1.47
16
A
A
HG
ZN
CYS
ZN
12
63
1.25
19
A
A
HG
O
CYS
CYS
12
15
1.52
20
A
A
HB3
HB3
CYS
CYS
27
53
1.29
20
A
A
HD1
HB2
TYR
CYS
31
35
1.29
20
A
A
HD2
HB2
HIS
PRO
8
28
1.34
20
A
A
HG
OD1
CYS
ASP
12
17
1.54
1
A
PRO
2
-65.74
-74.30
1
A
ASP
6
70.75
-58.38
1
A
HIS
8
-173.60
104.55
1
A
LYS
16
30.89
65.40
1
A
THR
26
-131.92
-55.38
1
A
PRO
28
-92.08
57.47
1
A
HIS
32
-83.55
-122.96
1
A
HIS
34
-153.33
22.89
1
A
TRP
48
-170.88
138.49
1
A
ARG
52
-167.16
19.64
1
A
THR
54
-163.11
-160.27
1
A
PRO
56
-80.70
47.99
2
A
ASP
6
-114.26
59.11
2
A
VAL
14
-83.67
-80.04
2
A
LYS
16
-47.40
69.48
2
A
PRO
28
-88.81
31.55
2
A
HIS
34
-145.38
12.84
2
A
ARG
52
-138.21
-69.86
3
A
LEU
3
-145.61
40.32
3
A
HIS
7
-100.45
-79.88
3
A
THR
26
-155.32
-51.78
3
A
PRO
28
-98.30
45.75
3
A
PRO
51
-80.09
38.98
3
A
ARG
52
-135.17
-70.33
3
A
LYS
59
71.67
-71.28
4
A
GLU
10
-87.07
41.96
4
A
VAL
14
-103.19
-69.64
4
A
CYS
24
-81.25
-155.94
4
A
PRO
28
-86.87
33.96
4
A
PRO
56
-84.98
-139.74
5
A
VAL
14
-103.68
-66.60
5
A
LYS
16
39.70
43.98
5
A
CYS
24
-70.18
-160.93
5
A
ASP
25
-130.89
-31.67
5
A
HIS
32
-79.81
-135.86
5
A
HIS
34
-148.93
12.75
5
A
PRO
38
-69.83
94.62
5
A
THR
54
43.28
-108.42
6
A
HIS
7
-134.89
-94.07
6
A
GLU
10
-94.35
34.13
6
A
PRO
28
-83.05
36.20
6
A
CYS
35
-98.06
44.22
6
A
ASP
45
-173.76
123.91
6
A
PRO
56
-84.43
41.23
7
A
SER
5
61.23
96.79
7
A
ASP
6
73.80
119.27
7
A
HIS
32
-78.85
-120.25
7
A
HIS
34
-162.67
19.12
7
A
ARG
52
-146.54
-50.14
7
A
LEU
58
-116.16
-95.90
8
A
ASP
6
-161.58
-63.22
8
A
HIS
8
-174.73
149.51
8
A
ASP
45
-86.77
-159.99
8
A
ARG
52
-109.65
-73.89
8
A
THR
54
64.23
-60.17
8
A
CYS
55
-157.59
-55.84
9
A
GLU
10
-89.71
37.58
9
A
VAL
14
-66.30
-73.75
9
A
PRO
28
-93.69
31.05
9
A
PRO
51
-86.91
37.82
9
A
ARG
52
-145.62
-57.12
9
A
LEU
58
-66.71
96.17
10
A
ASP
6
-121.01
-61.37
10
A
HIS
8
-146.62
-125.32
10
A
MET
9
-173.97
131.56
10
A
GLU
10
-92.57
37.19
10
A
VAL
14
-83.28
-82.42
10
A
LYS
16
-49.01
64.79
10
A
ASP
25
-71.20
-77.24
10
A
PRO
28
-91.19
52.22
10
A
HIS
32
-99.32
-141.37
10
A
HIS
34
-142.56
23.08
10
A
ARG
52
-137.62
-59.14
10
A
LEU
58
-144.80
54.77
11
A
VAL
14
-68.42
-75.53
11
A
CYS
15
-86.78
30.65
11
A
LYS
16
22.38
58.88
11
A
HIS
32
-91.79
-152.82
11
A
HIS
34
-150.33
24.45
11
A
ARG
52
-142.95
-60.65
11
A
CYS
53
-85.75
45.52
12
A
HIS
7
57.45
86.40
12
A
GLU
10
-84.09
40.81
12
A
VAL
14
-104.38
-67.06
12
A
LYS
16
45.69
25.89
12
A
PRO
28
-82.82
35.49
12
A
HIS
32
-82.60
-144.35
12
A
HIS
34
-157.39
24.33
12
A
ARG
52
179.77
39.97
12
A
LEU
58
65.36
-98.74
13
A
HIS
7
-107.75
-65.04
13
A
LYS
16
72.67
-4.03
13
A
ASP
25
-64.76
-78.88
13
A
PRO
28
-91.44
55.78
13
A
ARG
52
-162.32
37.69
13
A
PRO
56
-75.65
41.82
14
A
GLU
10
-80.34
41.21
14
A
PRO
44
-58.02
104.12
14
A
THR
54
-67.53
93.10
15
A
SER
5
-97.78
-66.33
15
A
ASP
6
48.65
-106.87
15
A
HIS
7
64.33
169.12
15
A
GLU
10
-80.30
40.69
15
A
VAL
14
-109.53
-74.00
15
A
THR
26
-130.81
-52.53
15
A
HIS
32
-77.38
-134.87
15
A
HIS
34
-154.61
16.61
15
A
THR
54
-134.42
-79.99
15
A
ALA
57
-110.14
-166.61
16
A
HIS
8
64.63
70.75
16
A
VAL
14
-102.73
-69.71
16
A
LYS
16
75.48
-4.71
16
A
HIS
34
-176.65
-41.04
16
A
CYS
35
-79.47
41.30
16
A
ARG
52
178.64
34.59
17
A
HIS
8
70.42
-67.08
17
A
MET
9
62.05
-168.51
17
A
GLU
10
179.98
-33.71
17
A
HIS
32
-79.41
-114.15
17
A
HIS
34
-155.77
18.90
17
A
LYS
59
-178.85
-31.92
18
A
VAL
14
-104.07
-66.54
18
A
LYS
16
50.00
16.88
18
A
CYS
24
-69.01
-176.67
18
A
HIS
32
-82.24
-122.88
18
A
HIS
34
-153.99
14.77
18
A
TRP
48
-174.73
146.59
18
A
LYS
59
68.65
-72.92
19
A
LEU
3
70.24
-58.92
19
A
ASP
6
-69.25
96.53
19
A
LYS
16
-37.38
75.72
19
A
CYS
24
-75.54
-169.53
19
A
HIS
32
-86.40
-132.30
19
A
TRP
48
-171.49
131.43
19
A
ARG
52
-127.04
-70.69
19
A
CYS
53
-84.02
47.23
19
A
THR
54
-93.00
38.86
19
A
CYS
55
108.77
-65.75
19
A
LEU
58
-151.46
-71.90
20
A
PRO
2
-63.30
98.58
20
A
SER
5
-67.53
-71.44
20
A
HIS
7
-114.54
68.64
20
A
HIS
8
-176.99
108.22
20
A
GLU
10
-82.48
40.93
20
A
VAL
14
-99.37
-67.95
20
A
LYS
16
38.13
36.12
20
A
HIS
32
-79.07
-116.77
20
A
HIS
34
-161.59
24.03
20
A
LEU
36
-98.05
-142.27
20
A
ARG
37
-59.26
176.12
20
A
PRO
38
-19.86
108.33
20
A
PRO
56
-81.18
45.89
20
A
LYS
59
-129.26
-52.55
Solution structure of the 2nd PHD domain from Mi2b with C-terminal loop replaced by corresponding loop from WSTF
1
N
N
2
N
N
2
N
N
metalc
2.264
A
CYS
12
A
SG
CYS
12
1_555
A
ZN
63
C
ZN
ZN
1_555
metalc
2.299
A
CYS
15
A
SG
CYS
15
1_555
A
ZN
63
C
ZN
ZN
1_555
metalc
2.281
A
CYS
24
A
SG
CYS
24
1_555
A
ZN
62
B
ZN
ZN
1_555
metalc
2.288
A
CYS
27
A
SG
CYS
27
1_555
A
ZN
62
B
ZN
ZN
1_555
metalc
1.989
A
HIS
32
A
ND1
HIS
32
1_555
A
ZN
63
C
ZN
ZN
1_555
metalc
2.330
A
CYS
35
A
SG
CYS
35
1_555
A
ZN
63
C
ZN
ZN
1_555
metalc
2.268
A
CYS
50
A
SG
CYS
50
1_555
A
ZN
62
B
ZN
ZN
1_555
metalc
2.277
A
CYS
53
A
SG
CYS
53
1_555
A
ZN
62
B
ZN
ZN
1_555
DNA binding protein/Transcription
PHD, zinc finger, protein scaffold, DNA binding protein-Transcription COMPLEX
CHD4_HUMAN
UNP
1
Q14839
AAC97879
GB
1
4049922
446
476
1MM3
6
36
Q14839
A
1
6
36
1215
1227
1MM3
37
49
4049922
A
2
37
49
490
501
1MM3
50
61
Q14839
A
1
50
61
1
cloning artifact
GLY
1
1MM3
A
Q14839
UNP
1
1
cloning artifact
PRO
2
1MM3
A
Q14839
UNP
2
1
cloning artifact
LEU
3
1MM3
A
Q14839
UNP
3
1
cloning artifact
GLY
4
1MM3
A
Q14839
UNP
4
1
cloning artifact
SER
5
1MM3
A
Q14839
UNP
5
2
anti-parallel
A
LEU
22
A
LEU
22
A
CYS
23
A
CYS
23
A
SER
30
A
SER
30
A
TYR
31
A
TYR
31
BINDING SITE FOR RESIDUE ZN A 62
A
ZN
62
Software
4
BINDING SITE FOR RESIDUE ZN A 63
A
ZN
63
Software
5
A
CYS
24
A
CYS
24
4
1_555
A
CYS
27
A
CYS
27
4
1_555
A
CYS
50
A
CYS
50
4
1_555
A
CYS
53
A
CYS
53
4
1_555
A
CYS
12
A
CYS
12
5
1_555
A
CYS
15
A
CYS
15
5
1_555
A
ASP
17
A
ASP
17
5
1_555
A
HIS
32
A
HIS
32
5
1_555
A
CYS
35
A
CYS
35
5
1_555