1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Yushmanov, V.E.
Mandal, P.K.
Liu, Z.
Tang, P.
Xu, Y.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Biochemistry
BICHAW
0033
0006-2960
42
3989
3995
10.1021/bi026767g
12667090
NMR Structure and Backbone Dynamics of the Extended Second Transmembrane Domain of the Human Neuronal Glycine Receptor Alpha1 Subunit
2003
10.2210/pdb1mot/pdb
pdb_00001mot
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
2804.249
Glycine Receptor alpha-1 CHAIN
Extented second transmembrane domain
1
man
polymer
Glycine Receptor alpha1 subunit, Glycine Receptor 48KDA SUBUNIT, STRYCHNINE BINDING SUBUNIT
no
no
APARVGLGITTVLTMTTQSSGSRASLPK
APARVGLGITTVLTMTTQSSGSRASLPK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
Escherichia coli
sample
GLRA1
9606
Homo sapiens
511693
Escherichia coli BL21
BL21
PLASMID
pGEX-3X
database_2
pdbx_nmr_spectrometer
pdbx_struct_assembly
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2003-09-23
1
1
2008-04-28
1
2
2011-07-13
1
3
2022-02-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_spectrometer.model
RCSB
Y
RCSB
2002-09-09
REL
REL
The structure was determined using standard 2D homonuclear and triple-resonance NMR spectroscopy.
structures with the lowest energy
30
20
2D NOESY
2D TOCSY
3D_15N-separated_NOESY
COSY
15N T1
15N T2
15N Het-NOE
300 mM SDS concentration
5.0
1
atm
303
K
the structures are based on a total of 187 restraints, 169 are NOE-derived
distance constraints,18 distance restraints
from hydrogen bonds
distance geometry, simulated annealing
1
lowest energy
SDS concentration: 300 mM
Peptide concentration: 2 mM
90% H2O/10% D2O
Brunger, A.T.
structure solution
X-PLOR
3.851
Brunger, A.T.
refinement
X-PLOR
3.851
600
Bruker
AVANCE
500
Bruker
DRX
ALA
249
n
1
ALA
249
A
PRO
250
n
2
PRO
250
A
ALA
251
n
3
ALA
251
A
ARG
252
n
4
ARG
252
A
VAL
253
n
5
VAL
253
A
GLY
254
n
6
GLY
254
A
LEU
255
n
7
LEU
255
A
GLY
256
n
8
GLY
256
A
ILE
257
n
9
ILE
257
A
THR
258
n
10
THR
258
A
THR
259
n
11
THR
259
A
VAL
260
n
12
VAL
260
A
LEU
261
n
13
LEU
261
A
THR
262
n
14
THR
262
A
MET
263
n
15
MET
263
A
THR
264
n
16
THR
264
A
THR
265
n
17
THR
265
A
GLN
266
n
18
GLN
266
A
SER
267
n
19
SER
267
A
SER
268
n
20
SER
268
A
GLY
269
n
21
GLY
269
A
SER
270
n
22
SER
270
A
ARG
271
n
23
ARG
271
A
ALA
272
n
24
ALA
272
A
SER
273
n
25
SER
273
A
LEU
274
n
26
LEU
274
A
PRO
275
n
27
PRO
275
A
LYS
276
n
28
LYS
276
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
5
A
A
HE21
O
GLN
LYS
266
276
1.57
6
A
A
O
H
LEU
LYS
274
276
1.57
10
A
A
HH12
OXT
ARG
LYS
271
276
1.59
11
A
A
HH12
OXT
ARG
LYS
271
276
1.53
11
A
A
O
HG1
GLY
THR
254
258
1.58
12
A
A
HH12
OXT
ARG
LYS
252
276
1.52
12
A
A
HG1
O
THR
LYS
259
276
1.54
15
A
A
HH12
OXT
ARG
LYS
271
276
1.57
18
A
A
HG
O
SER
LYS
268
276
1.54
19
A
A
HH22
OXT
ARG
LYS
271
276
1.52
19
A
A
HH12
O
ARG
LYS
271
276
1.52
1
A
GLN
266
68.67
-47.37
1
A
SER
270
69.65
-52.89
1
A
ALA
272
-75.45
-122.41
1
A
PRO
275
-61.29
56.82
2
A
PRO
250
-76.33
-147.02
2
A
ALA
251
-150.92
-70.33
2
A
THR
264
-86.49
46.05
2
A
THR
265
-74.09
43.76
3
A
SER
267
-91.09
-152.73
3
A
ARG
271
71.43
43.86
4
A
SER
267
61.66
-126.08
4
A
SER
268
-77.24
43.66
4
A
PRO
275
-60.18
60.30
5
A
SER
267
-163.68
-52.69
5
A
ARG
271
69.28
-53.44
6
A
PRO
250
-66.06
60.84
6
A
ALA
251
56.47
-142.61
6
A
SER
268
-69.78
56.48
6
A
SER
270
58.25
-142.23
6
A
ARG
271
72.12
121.08
6
A
ALA
272
57.27
-140.20
6
A
SER
273
-86.41
49.46
6
A
PRO
275
-56.31
50.03
7
A
PRO
250
-73.23
-137.98
7
A
ALA
251
-76.39
-148.41
7
A
GLN
266
67.50
-61.99
7
A
SER
267
-172.33
-141.47
7
A
SER
268
61.06
-140.81
7
A
ALA
272
-81.23
33.81
8
A
PRO
250
-70.13
49.50
8
A
ALA
251
47.34
-123.62
8
A
GLN
266
-64.98
92.04
8
A
SER
267
-78.88
46.89
8
A
SER
268
67.11
-54.71
8
A
ARG
271
68.07
-74.93
9
A
THR
265
-82.56
-142.48
9
A
SER
273
-96.33
51.96
10
A
PRO
250
-68.90
68.67
10
A
ALA
251
-67.26
-73.26
10
A
SER
267
62.94
-141.55
10
A
SER
270
55.97
-130.66
10
A
ALA
272
52.28
-140.07
10
A
PRO
275
-64.55
61.35
11
A
ALA
251
61.15
-150.55
11
A
THR
265
33.47
58.18
11
A
SER
270
-173.88
137.32
11
A
ALA
272
-87.31
-137.10
12
A
MET
263
-159.67
56.70
12
A
ARG
271
69.78
-46.40
12
A
ALA
272
-145.55
-135.66
13
A
THR
264
-79.25
46.33
13
A
SER
270
-104.86
-152.43
13
A
ARG
271
69.93
-50.92
14
A
GLN
266
69.76
-51.77
14
A
SER
268
73.56
52.46
14
A
ARG
271
-79.18
49.32
14
A
SER
273
58.50
-151.53
15
A
PRO
250
-72.64
47.85
15
A
ALA
251
48.88
-115.84
15
A
THR
265
-84.91
32.47
16
A
ALA
251
63.42
-66.59
16
A
THR
265
-75.17
49.84
16
A
SER
270
-147.30
-49.33
16
A
ARG
271
-159.41
46.67
17
A
THR
264
-94.24
41.39
17
A
SER
267
62.61
-125.16
17
A
ARG
271
64.23
-143.71
17
A
SER
273
-167.05
-166.79
18
A
ARG
252
-93.96
55.21
18
A
THR
264
-86.72
38.53
18
A
GLN
266
55.27
-108.21
18
A
SER
268
-76.89
46.37
19
A
GLN
266
-163.43
-48.45
19
A
SER
268
-159.22
-154.78
19
A
SER
270
67.59
-58.05
19
A
ALA
272
68.31
-51.19
20
A
ALA
251
56.68
-101.17
20
A
SER
267
-83.75
48.68
20
A
SER
270
-79.00
48.75
20
A
ARG
271
69.83
132.58
20
A
SER
273
-170.91
114.65
20
A
PRO
275
-61.54
-168.75
NMR Structure Of Extended Second Transmembrane Domain Of Glycine Receptor alpha1 Subunit in SDS Micelles
1
N
N
A
PRO
250
A
PRO
2
HELX_P
A
THR
264
A
THR
16
1
1
15
MEMBRANE PROTEIN
glycine receptor, second transmembrane domain, micelles, MEMBRANE PROTEIN
GLRA1_HUMAN
UNP
1
277
P23415
APARVGLGITTVLTMTTQSSGSRASLPK
277
304
1MOT
249
276
P23415
A
1
1
28