0.017960
0.000000
0.007260
0.000000
0.014472
0.000000
0.000000
0.000000
0.014786
0.00000
0.00000
0.00000
Van Den Elsen, J.M.H.
Herron, J.N.
Kroon, J.
Gros, P.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.00
112.01
90.00
55.680
69.100
72.950
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cd 2
112.411
CADMIUM ION
non-polymer
C25 H23 N3 O7 S
509.531
n
5-[2-(2-AMINO-2-CARBAMOYL-ETHYLSULFANYL)-ACETYLAMINO]-2-(3,6-DIHYDROXY-9,9A-DIHYDRO-3H-XANTHEN-9-YL)-BENZOIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C6 H11 N O4
161.156
n
N-METHYLCARBONYLTHREONINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CD
Y
75
N
C
N
76
N
O
Y
77
N
C
Y
78
N
C
N
79
N
O
Y
80
N
C
Y
81
N
C
Y
82
N
C
N
83
N
O
Y
84
N
C
Y
85
N
C
Y
86
N
C
N
87
R
C
Y
88
N
C
Y
89
N
C
Y
90
N
C
Y
91
N
C
Y
92
N
C
Y
93
N
C
Y
94
N
C
Y
95
N
C
Y
96
N
C
N
97
N
C
N
98
N
O
N
99
N
O
N
100
N
N
N
101
N
C
N
102
N
O
N
103
N
C
N
104
N
S
N
105
N
C
N
106
R
C
N
107
N
N
N
108
N
O
N
109
N
C
N
110
N
N
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
N
N
135
R
C
N
136
N
C
N
137
N
O
N
138
N
C
N
139
N
S
N
140
N
O
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
N
N
149
S
C
N
150
N
C
N
151
N
O
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
O
N
156
N
N
N
157
N
O
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
N
N
169
S
C
N
170
N
C
N
171
N
O
N
172
N
C
N
173
N
C
N
174
N
C
N
175
N
O
N
176
N
O
N
177
N
O
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
N
N
188
N
C
N
189
N
C
N
190
N
O
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
N
N
198
S
C
N
199
N
C
N
200
N
O
N
201
N
C
Y
202
N
C
Y
203
N
N
Y
204
N
C
Y
205
N
C
Y
206
N
N
N
207
N
O
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
O
N
219
N
H
N
220
N
H
N
221
N
N
N
222
S
C
N
223
N
C
N
224
N
O
N
225
S
C
N
226
N
C
N
227
N
C
N
228
N
C
N
229
N
O
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
N
N
244
S
C
N
245
N
C
N
246
N
O
N
247
N
C
N
248
N
C
N
249
N
C
N
250
N
C
N
251
N
O
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
N
N
266
S
C
N
267
N
C
N
268
N
O
N
269
N
C
N
270
N
C
N
271
N
C
N
272
N
C
N
273
N
N
N
274
N
O
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
C
N
296
N
S
N
297
N
C
N
298
N
O
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
N
N
311
S
C
N
312
N
C
N
313
N
O
N
314
N
C
Y
315
N
C
Y
316
N
C
Y
317
N
C
Y
318
N
C
Y
319
N
C
Y
320
N
C
N
321
N
O
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
N
N
334
S
C
N
335
N
C
N
336
N
O
N
337
N
C
N
338
N
C
N
339
N
C
N
340
N
O
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
N
N
351
S
C
N
352
N
C
N
353
N
O
N
354
N
C
N
355
N
O
N
356
N
O
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
N
N
365
N
C
N
366
N
O
N
367
N
C
N
368
S
C
N
369
R
C
N
370
N
O
N
371
N
C
N
372
N
C
N
373
N
O
N
374
N
O
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
N
N
387
S
C
N
388
N
C
N
389
N
O
N
390
R
C
N
391
N
O
N
392
N
C
N
393
N
O
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
N
N
404
S
C
N
405
N
C
N
406
N
O
N
407
N
C
Y
408
N
C
Y
409
N
C
Y
410
N
C
Y
411
N
N
Y
412
N
C
Y
413
N
C
Y
414
N
C
Y
415
N
C
Y
416
N
C
N
417
N
O
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
N
N
431
S
C
N
432
N
C
N
433
N
O
N
434
N
C
Y
435
N
C
Y
436
N
C
Y
437
N
C
Y
438
N
C
Y
439
N
C
Y
440
N
C
N
441
N
O
N
442
N
O
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
N
N
455
S
C
N
456
N
C
N
457
N
O
N
458
N
C
N
459
N
C
N
460
N
C
N
461
N
O
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
H
N
472
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
Y
71
N
doub
Y
72
N
sing
N
73
N
sing
Y
74
N
sing
N
75
N
sing
N
76
N
sing
Y
77
N
doub
N
78
N
sing
Y
79
N
doub
Y
80
N
sing
Y
81
N
sing
N
82
N
sing
N
83
N
sing
Y
84
N
doub
N
85
N
sing
Y
86
N
sing
N
87
N
sing
Y
88
N
doub
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
Y
94
N
sing
Y
95
N
doub
N
96
N
sing
N
97
N
sing
Y
98
N
doub
Y
99
N
sing
Y
100
N
sing
N
101
N
sing
Y
102
N
doub
N
103
N
sing
Y
104
N
sing
N
105
N
sing
Y
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
doub
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
doub
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
doub
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
doub
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
doub
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
doub
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
doub
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
doub
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
Y
202
N
sing
Y
203
N
doub
Y
204
N
doub
N
205
N
sing
Y
206
N
sing
N
207
N
sing
Y
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
doub
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
doub
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
doub
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
doub
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
Y
310
N
doub
Y
311
N
sing
Y
312
N
sing
N
313
N
sing
Y
314
N
doub
N
315
N
sing
Y
316
N
doub
N
317
N
sing
Y
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
doub
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
doub
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
doub
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
doub
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
doub
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
doub
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
Y
400
N
doub
Y
401
N
sing
Y
402
N
sing
N
403
N
sing
Y
404
N
doub
Y
405
N
sing
Y
406
N
sing
N
407
N
sing
Y
408
N
sing
Y
409
N
doub
N
410
N
sing
Y
411
N
doub
N
412
N
sing
Y
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
doub
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
Y
428
N
doub
Y
429
N
sing
Y
430
N
sing
N
431
N
sing
Y
432
N
doub
N
433
N
sing
Y
434
N
doub
N
435
N
sing
Y
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
doub
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
US
Proteins
PSFGEY
0867
0887-3585
29
113
125
10.1002/(SICI)1097-0134(199709)29:1<113::AID-PROT9>3.3.CO;2-U
9294871
Bactericidal antibody recognition of a PorA epitope of Neisseria meningitidis: crystal structure of a Fab fragment in complex with a fluorescein-conjugated peptide.
1997
10.2210/pdb1mpa/pdb
pdb_00001mpa
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
298
1
COLLIMATOR
IMAGE PLATE
1995-03
MAC Science DIP-2020
GRAPHITE(002)
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
ENRAF-NONIUS FR571
24122.861
MN12H2 IGG2A-KAPPA
FAB FRAGMENT
1
man
polymer
24415.350
MN12H2 IGG2A-KAPPA
FAB FRAGMENT
1
man
polymer
1453.509
PORA P1.16 PEPTIDE FLUORESCEIN CONJUGATE
APEX OF EXTRACELLULAR LOOP 4 (VR2) OF PORA, RESIDUES 180 - 187
1
man
polymer
112.411
CADMIUM ION
1
syn
non-polymer
18.015
water
17
nat
water
P1.16, AC-TKDTNNNLC(FLUORESCEIN)-NH2
no
no
DIVMTQTPLSLPVSLGDKASISCRSSQALVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKI
SRVEAEDLGVFFCSQSTHVPRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER
QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
DIVMTQTPLSLPVSLGDKASISCRSSQALVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKI
SRVEAEDLGVFFCSQSTHVPRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER
QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
L
polypeptide(L)
no
no
EVNLQQSGTVLARPGASVRMSCKASGYSFTSYWLHWIKQRPGQGLEWIGGIYPGNRDTRYTQRFKDKAKLTAVTSANTAY
MELSSLTNEDSAVYYCSIIYFDYADFIMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTL
TWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGPTI
EVNLQQSGTVLARPGASVRMSCKASGYSFTSYWLHWIKQRPGQGLEWIGGIYPGNRDTRYTQRFKDKAKLTAVTSANTAY
MELSSLTNEDSAVYYCSIIYFDYADFIMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTL
TWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGPTI
H
polypeptide(L)
no
yes
(THC)KDTNNNL(CYF)
TKDTNNNLC
P
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
house mouse
Mus
BALB/C
house mouse
Mus
sample
B-LYMPHOCYTE HYBRIDOMA
10090
Mus musculus
MN12H2 MURINE-MURINE HYBRIDOMA CELL LINE
10090
Mus musculus
house mouse
Mus
BALB/C
house mouse
Mus
sample
B-LYMPHOCYTE HYBRIDOMA
10090
Mus musculus
MN12H2 MURINE-MURINE HYBRIDOMA CELL LINE
10090
Mus musculus
1
2.6
53.
4.6
THE MN12H2 FAB PEPTIDE COMPLEX WAS CRYSTALLIZED FROM 15% W/V PEG 20000, 100 MM SODIUM ACETATE, PH 4.6, 20 MM CDCL.
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_conn_type
struct_ref_seq_dif
struct_site
atom_site
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Refinement description
Atomic model
Data collection
1
0
1997-09-04
1
1
2008-03-03
1
2
2011-07-13
1
3
2023-08-09
2
0
2023-11-15
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.conn_type_id
_struct_conn.id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn_type.id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_atom_site.auth_atom_id
_atom_site.label_atom_id
Y
BNL
1997-02-26
REL
REL
CD
CADMIUM ION
HOH
water
2HFL
PDB ENTRY 2HFL
PDB
experimental model
CD
1
4
CD
CD
220
L
HOH
4
5
HOH
HOH
221
L
HOH
5
5
HOH
HOH
222
L
HOH
7
5
HOH
HOH
223
L
HOH
8
5
HOH
HOH
224
L
HOH
11
5
HOH
HOH
225
L
HOH
15
5
HOH
HOH
226
L
HOH
20
5
HOH
HOH
227
L
HOH
21
5
HOH
HOH
228
L
HOH
1
5
HOH
HOH
226
H
HOH
2
5
HOH
HOH
227
H
HOH
3
5
HOH
HOH
228
H
HOH
9
5
HOH
HOH
229
H
HOH
10
5
HOH
HOH
230
H
HOH
17
5
HOH
HOH
231
H
HOH
18
5
HOH
HOH
232
H
HOH
19
5
HOH
HOH
233
H
HOH
16
5
HOH
HOH
16
P
ASP
1
n
1
ASP
1
L
ILE
2
n
2
ILE
2
L
VAL
3
n
3
VAL
3
L
MET
4
n
4
MET
4
L
THR
5
n
5
THR
5
L
GLN
6
n
6
GLN
6
L
THR
7
n
7
THR
7
L
PRO
8
n
8
PRO
8
L
LEU
9
n
9
LEU
9
L
SER
10
n
10
SER
10
L
LEU
11
n
11
LEU
11
L
PRO
12
n
12
PRO
12
L
VAL
13
n
13
VAL
13
L
SER
14
n
14
SER
14
L
LEU
15
n
15
LEU
15
L
GLY
16
n
16
GLY
16
L
ASP
17
n
17
ASP
17
L
LYS
18
n
18
LYS
18
L
ALA
19
n
19
ALA
19
L
SER
20
n
20
SER
20
L
ILE
21
n
21
ILE
21
L
SER
22
n
22
SER
22
L
CYS
23
n
23
CYS
23
L
ARG
24
n
24
ARG
24
L
SER
25
n
25
SER
25
L
SER
26
n
26
SER
26
L
GLN
27
n
27
GLN
27
L
ALA
28
n
28
ALA
28
L
LEU
29
n
29
LEU
29
L
VAL
30
n
30
VAL
30
L
HIS
31
n
31
HIS
31
L
SER
32
n
32
SER
32
L
ASN
33
n
33
ASN
33
L
GLY
34
n
34
GLY
34
L
ASN
35
n
35
ASN
35
L
THR
36
n
36
THR
36
L
TYR
37
n
37
TYR
37
L
LEU
38
n
38
LEU
38
L
HIS
39
n
39
HIS
39
L
TRP
40
n
40
TRP
40
L
TYR
41
n
41
TYR
41
L
LEU
42
n
42
LEU
42
L
GLN
43
n
43
GLN
43
L
LYS
44
n
44
LYS
44
L
PRO
45
n
45
PRO
45
L
GLY
46
n
46
GLY
46
L
GLN
47
n
47
GLN
47
L
SER
48
n
48
SER
48
L
PRO
49
n
49
PRO
49
L
LYS
50
n
50
LYS
50
L
LEU
51
n
51
LEU
51
L
LEU
52
n
52
LEU
52
L
ILE
53
n
53
ILE
53
L
TYR
54
n
54
TYR
54
L
LYS
55
n
55
LYS
55
L
VAL
56
n
56
VAL
56
L
SER
57
n
57
SER
57
L
ASN
58
n
58
ASN
58
L
ARG
59
n
59
ARG
59
L
PHE
60
n
60
PHE
60
L
SER
61
n
61
SER
61
L
GLY
62
n
62
GLY
62
L
VAL
63
n
63
VAL
63
L
PRO
64
n
64
PRO
64
L
ASP
65
n
65
ASP
65
L
ARG
66
n
66
ARG
66
L
PHE
67
n
67
PHE
67
L
SER
68
n
68
SER
68
L
GLY
69
n
69
GLY
69
L
SER
70
n
70
SER
70
L
GLY
71
n
71
GLY
71
L
SER
72
n
72
SER
72
L
GLY
73
n
73
GLY
73
L
THR
74
n
74
THR
74
L
ASP
75
n
75
ASP
75
L
PHE
76
n
76
PHE
76
L
THR
77
n
77
THR
77
L
LEU
78
n
78
LEU
78
L
LYS
79
n
79
LYS
79
L
ILE
80
n
80
ILE
80
L
SER
81
n
81
SER
81
L
ARG
82
n
82
ARG
82
L
VAL
83
n
83
VAL
83
L
GLU
84
n
84
GLU
84
L
ALA
85
n
85
ALA
85
L
GLU
86
n
86
GLU
86
L
ASP
87
n
87
ASP
87
L
LEU
88
n
88
LEU
88
L
GLY
89
n
89
GLY
89
L
VAL
90
n
90
VAL
90
L
PHE
91
n
91
PHE
91
L
PHE
92
n
92
PHE
92
L
CYS
93
n
93
CYS
93
L
SER
94
n
94
SER
94
L
GLN
95
n
95
GLN
95
L
SER
96
n
96
SER
96
L
THR
97
n
97
THR
97
L
HIS
98
n
98
HIS
98
L
VAL
99
n
99
VAL
99
L
PRO
100
n
100
PRO
100
L
ARG
101
n
101
ARG
101
L
THR
102
n
102
THR
102
L
PHE
103
n
103
PHE
103
L
GLY
104
n
104
GLY
104
L
GLY
105
n
105
GLY
105
L
GLY
106
n
106
GLY
106
L
THR
107
n
107
THR
107
L
LYS
108
n
108
LYS
108
L
LEU
109
n
109
LEU
109
L
GLU
110
n
110
GLU
110
L
ILE
111
n
111
ILE
111
L
LYS
112
n
112
LYS
112
L
ARG
113
n
113
ARG
113
L
ALA
114
n
114
ALA
114
L
ASP
115
n
115
ASP
115
L
ALA
116
n
116
ALA
116
L
ALA
117
n
117
ALA
117
L
PRO
118
n
118
PRO
118
L
THR
119
n
119
THR
119
L
VAL
120
n
120
VAL
120
L
SER
121
n
121
SER
121
L
ILE
122
n
122
ILE
122
L
PHE
123
n
123
PHE
123
L
PRO
124
n
124
PRO
124
L
PRO
125
n
125
PRO
125
L
SER
126
n
126
SER
126
L
SER
127
n
127
SER
127
L
GLU
128
n
128
GLU
128
L
GLN
129
n
129
GLN
129
L
LEU
130
n
130
LEU
130
L
THR
131
n
131
THR
131
L
SER
132
n
132
SER
132
L
GLY
133
n
133
GLY
133
L
GLY
134
n
134
GLY
134
L
ALA
135
n
135
ALA
135
L
SER
136
n
136
SER
136
L
VAL
137
n
137
VAL
137
L
VAL
138
n
138
VAL
138
L
CYS
139
n
139
CYS
139
L
PHE
140
n
140
PHE
140
L
LEU
141
n
141
LEU
141
L
ASN
142
n
142
ASN
142
L
ASN
143
n
143
ASN
143
L
PHE
144
n
144
PHE
144
L
TYR
145
n
145
TYR
145
L
PRO
146
n
146
PRO
146
L
LYS
147
n
147
LYS
147
L
ASP
148
n
148
ASP
148
L
ILE
149
n
149
ILE
149
L
ASN
150
n
150
ASN
150
L
VAL
151
n
151
VAL
151
L
LYS
152
n
152
LYS
152
L
TRP
153
n
153
TRP
153
L
LYS
154
n
154
LYS
154
L
ILE
155
n
155
ILE
155
L
ASP
156
n
156
ASP
156
L
GLY
157
n
157
GLY
157
L
SER
158
n
158
SER
158
L
GLU
159
n
159
GLU
159
L
ARG
160
n
160
ARG
160
L
GLN
161
n
161
GLN
161
L
ASN
162
n
162
ASN
162
L
GLY
163
n
163
GLY
163
L
VAL
164
n
164
VAL
164
L
LEU
165
n
165
LEU
165
L
ASN
166
n
166
ASN
166
L
SER
167
n
167
SER
167
L
TRP
168
n
168
TRP
168
L
THR
169
n
169
THR
169
L
ASP
170
n
170
ASP
170
L
GLN
171
n
171
GLN
171
L
ASP
172
n
172
ASP
172
L
SER
173
n
173
SER
173
L
LYS
174
n
174
LYS
174
L
ASP
175
n
175
ASP
175
L
SER
176
n
176
SER
176
L
THR
177
n
177
THR
177
L
TYR
178
n
178
TYR
178
L
SER
179
n
179
SER
179
L
MET
180
n
180
MET
180
L
SER
181
n
181
SER
181
L
SER
182
n
182
SER
182
L
THR
183
n
183
THR
183
L
LEU
184
n
184
LEU
184
L
THR
185
n
185
THR
185
L
LEU
186
n
186
LEU
186
L
THR
187
n
187
THR
187
L
LYS
188
n
188
LYS
188
L
ASP
189
n
189
ASP
189
L
GLU
190
n
190
GLU
190
L
TYR
191
n
191
TYR
191
L
GLU
192
n
192
GLU
192
L
ARG
193
n
193
ARG
193
L
HIS
194
n
194
HIS
194
L
ASN
195
n
195
ASN
195
L
SER
196
n
196
SER
196
L
TYR
197
n
197
TYR
197
L
THR
198
n
198
THR
198
L
CYS
199
n
199
CYS
199
L
GLU
200
n
200
GLU
200
L
ALA
201
n
201
ALA
201
L
THR
202
n
202
THR
202
L
HIS
203
n
203
HIS
203
L
LYS
204
n
204
LYS
204
L
THR
205
n
205
THR
205
L
SER
206
n
206
SER
206
L
THR
207
n
207
THR
207
L
SER
208
n
208
SER
208
L
PRO
209
n
209
PRO
209
L
ILE
210
n
210
ILE
210
L
VAL
211
n
211
VAL
211
L
LYS
212
n
212
LYS
212
L
SER
213
n
213
SER
213
L
PHE
214
n
214
PHE
214
L
ASN
215
n
215
ASN
215
L
ARG
216
n
216
ARG
216
L
ASN
217
n
217
ASN
217
L
GLU
218
n
218
GLU
218
L
CYS
219
n
219
CYS
219
L
GLU
1
n
1
GLU
1
H
VAL
2
n
2
VAL
2
H
ASN
3
n
3
ASN
3
H
LEU
4
n
4
LEU
4
H
GLN
5
n
5
GLN
5
H
GLN
6
n
6
GLN
6
H
SER
7
n
7
SER
7
H
GLY
8
n
8
GLY
8
H
THR
9
n
9
THR
9
H
VAL
10
n
10
VAL
10
H
LEU
11
n
11
LEU
11
H
ALA
12
n
12
ALA
12
H
ARG
13
n
13
ARG
13
H
PRO
14
n
14
PRO
14
H
GLY
15
n
15
GLY
15
H
ALA
16
n
16
ALA
16
H
SER
17
n
17
SER
17
H
VAL
18
n
18
VAL
18
H
ARG
19
n
19
ARG
19
H
MET
20
n
20
MET
20
H
SER
21
n
21
SER
21
H
CYS
22
n
22
CYS
22
H
LYS
23
n
23
LYS
23
H
ALA
24
n
24
ALA
24
H
SER
25
n
25
SER
25
H
GLY
26
n
26
GLY
26
H
TYR
27
n
27
TYR
27
H
SER
28
n
28
SER
28
H
PHE
29
n
29
PHE
29
H
THR
30
n
30
THR
30
H
SER
31
n
31
SER
31
H
TYR
32
n
32
TYR
32
H
TRP
33
n
33
TRP
33
H
LEU
34
n
34
LEU
34
H
HIS
35
n
35
HIS
35
H
TRP
36
n
36
TRP
36
H
ILE
37
n
37
ILE
37
H
LYS
38
n
38
LYS
38
H
GLN
39
n
39
GLN
39
H
ARG
40
n
40
ARG
40
H
PRO
41
n
41
PRO
41
H
GLY
42
n
42
GLY
42
H
GLN
43
n
43
GLN
43
H
GLY
44
n
44
GLY
44
H
LEU
45
n
45
LEU
45
H
GLU
46
n
46
GLU
46
H
TRP
47
n
47
TRP
47
H
ILE
48
n
48
ILE
48
H
GLY
49
n
49
GLY
49
H
GLY
50
n
50
GLY
50
H
ILE
51
n
51
ILE
51
H
TYR
52
n
52
TYR
52
H
PRO
53
n
53
PRO
53
H
GLY
54
n
54
GLY
54
H
ASN
55
n
55
ASN
55
H
ARG
56
n
56
ARG
56
H
ASP
57
n
57
ASP
57
H
THR
58
n
58
THR
58
H
ARG
59
n
59
ARG
59
H
TYR
60
n
60
TYR
60
H
THR
61
n
61
THR
61
H
GLN
62
n
62
GLN
62
H
ARG
63
n
63
ARG
63
H
PHE
64
n
64
PHE
64
H
LYS
65
n
65
LYS
65
H
ASP
66
n
66
ASP
66
H
LYS
67
n
67
LYS
67
H
ALA
68
n
68
ALA
68
H
LYS
69
n
69
LYS
69
H
LEU
70
n
70
LEU
70
H
THR
71
n
71
THR
71
H
ALA
72
n
72
ALA
72
H
VAL
73
n
73
VAL
73
H
THR
74
n
74
THR
74
H
SER
75
n
75
SER
75
H
ALA
76
n
76
ALA
76
H
ASN
77
n
77
ASN
77
H
THR
78
n
78
THR
78
H
ALA
79
n
79
ALA
79
H
TYR
80
n
80
TYR
80
H
MET
81
n
81
MET
81
H
GLU
82
n
82
GLU
82
H
LEU
83
n
83
LEU
83
H
SER
84
n
84
SER
84
H
SER
85
n
85
SER
85
H
LEU
86
n
86
LEU
86
H
THR
87
n
87
THR
87
H
ASN
88
n
88
ASN
88
H
GLU
89
n
89
GLU
89
H
ASP
90
n
90
ASP
90
H
SER
91
n
91
SER
91
H
ALA
92
n
92
ALA
92
H
VAL
93
n
93
VAL
93
H
TYR
94
n
94
TYR
94
H
TYR
95
n
95
TYR
95
H
CYS
96
n
96
CYS
96
H
SER
97
n
97
SER
97
H
ILE
98
n
98
ILE
98
H
ILE
99
n
99
ILE
99
H
TYR
100
n
100
TYR
100
H
PHE
101
n
101
PHE
101
H
ASP
102
n
102
ASP
102
H
TYR
103
n
103
TYR
103
H
ALA
104
n
104
ALA
104
H
ASP
105
n
105
ASP
105
H
PHE
106
n
106
PHE
106
H
ILE
107
n
107
ILE
107
H
MET
108
n
108
MET
108
H
ASP
109
n
109
ASP
109
H
TYR
110
n
110
TYR
110
H
TRP
111
n
111
TRP
111
H
GLY
112
n
112
GLY
112
H
GLN
113
n
113
GLN
113
H
GLY
114
n
114
GLY
114
H
THR
115
n
115
THR
115
H
THR
116
n
116
THR
116
H
VAL
117
n
117
VAL
117
H
THR
118
n
118
THR
118
H
VAL
119
n
119
VAL
119
H
SER
120
n
120
SER
120
H
SER
121
n
121
SER
121
H
ALA
122
n
122
ALA
122
H
LYS
123
n
123
LYS
123
H
THR
124
n
124
THR
124
H
THR
125
n
125
THR
125
H
ALA
126
n
126
ALA
126
H
PRO
127
n
127
PRO
127
H
SER
128
n
128
SER
128
H
VAL
129
n
129
VAL
129
H
TYR
130
n
130
TYR
130
H
PRO
131
n
131
PRO
131
H
LEU
132
n
132
LEU
132
H
ALA
133
n
133
ALA
133
H
PRO
134
n
134
PRO
134
H
VAL
135
n
135
VAL
135
H
CYS
136
n
136
CYS
136
H
GLY
137
n
137
GLY
137
H
ASP
138
n
138
ASP
138
H
THR
139
n
139
THR
139
H
THR
140
n
140
THR
140
H
GLY
141
n
141
GLY
141
H
SER
142
n
142
SER
142
H
SER
143
n
143
SER
143
H
VAL
144
n
144
VAL
144
H
THR
145
n
145
THR
145
H
LEU
146
n
146
LEU
146
H
GLY
147
n
147
GLY
147
H
CYS
148
n
148
CYS
148
H
LEU
149
n
149
LEU
149
H
VAL
150
n
150
VAL
150
H
LYS
151
n
151
LYS
151
H
GLY
152
n
152
GLY
152
H
TYR
153
n
153
TYR
153
H
PHE
154
n
154
PHE
154
H
PRO
155
n
155
PRO
155
H
GLU
156
n
156
GLU
156
H
PRO
157
n
157
PRO
157
H
VAL
158
n
158
VAL
158
H
THR
159
n
159
THR
159
H
LEU
160
n
160
LEU
160
H
THR
161
n
161
THR
161
H
TRP
162
n
162
TRP
162
H
ASN
163
n
163
ASN
163
H
SER
164
n
164
SER
164
H
GLY
165
n
165
GLY
165
H
SER
166
n
166
SER
166
H
LEU
167
n
167
LEU
167
H
SER
168
n
168
SER
168
H
SER
169
n
169
SER
169
H
GLY
170
n
170
GLY
170
H
VAL
171
n
171
VAL
171
H
HIS
172
n
172
HIS
172
H
THR
173
n
173
THR
173
H
PHE
174
n
174
PHE
174
H
PRO
175
n
175
PRO
175
H
ALA
176
n
176
ALA
176
H
VAL
177
n
177
VAL
177
H
LEU
178
n
178
LEU
178
H
GLN
179
n
179
GLN
179
H
SER
180
n
180
SER
180
H
ASP
181
n
181
ASP
181
H
LEU
182
n
182
LEU
182
H
TYR
183
n
183
TYR
183
H
THR
184
n
184
THR
184
H
LEU
185
n
185
LEU
185
H
SER
186
n
186
SER
186
H
SER
187
n
187
SER
187
H
SER
188
n
188
SER
188
H
VAL
189
n
189
VAL
189
H
THR
190
n
190
THR
190
H
VAL
191
n
191
VAL
191
H
THR
192
n
192
THR
192
H
SER
193
n
193
SER
193
H
SER
194
n
194
SER
194
H
THR
195
n
195
THR
195
H
TRP
196
n
196
TRP
196
H
PRO
197
n
197
PRO
197
H
SER
198
n
198
SER
198
H
GLN
199
n
199
GLN
199
H
SER
200
n
200
SER
200
H
ILE
201
n
201
ILE
201
H
THR
202
n
202
THR
202
H
CYS
203
n
203
CYS
203
H
ASN
204
n
204
ASN
204
H
VAL
205
n
205
VAL
205
H
ALA
206
n
206
ALA
206
H
HIS
207
n
207
HIS
207
H
PRO
208
n
208
PRO
208
H
ALA
209
n
209
ALA
209
H
SER
210
n
210
SER
210
H
SER
211
n
211
SER
211
H
THR
212
n
212
THR
212
H
LYS
213
n
213
LYS
213
H
VAL
214
n
214
VAL
214
H
ASP
215
n
215
ASP
215
H
LYS
216
n
216
LYS
216
H
LYS
217
n
217
LYS
217
H
ILE
218
n
218
ILE
218
H
GLU
219
n
219
GLU
219
H
PRO
220
n
220
PRO
220
H
ARG
221
n
221
ARG
221
H
GLY
222
n
222
GLY
222
H
PRO
223
n
223
PRO
223
H
THR
224
n
224
THR
224
H
ILE
225
n
225
ILE
225
H
THC
1
n
1
THC
1
P
LYS
2
n
2
LYS
2
P
ASP
3
n
3
ASP
3
P
THR
4
n
4
THR
4
P
ASN
5
n
5
ASN
5
P
ASN
6
n
6
ASN
6
P
ASN
7
n
7
ASN
7
P
LEU
8
n
8
LEU
8
P
CYF
9
n
9
CYF
9
P
author_and_software_defined_assembly
PISA
3
trimeric
software_defined_assembly
PISA
3
trimeric
5690
-30
19480
4960
-33
20210
L
HIS
98
A
ND1
HIS
98
1_555
L
CD
220
D
CD
CD
1_555
L
HOH
222
E
O
HOH
1_555
113.6
L
HIS
98
A
ND1
HIS
98
1_555
L
CD
220
D
CD
CD
1_555
L
HOH
224
E
O
HOH
1_555
80.4
L
HOH
222
E
O
HOH
1_555
L
CD
220
D
CD
CD
1_555
L
HOH
224
E
O
HOH
1_555
86.3
P
THC
1
N-METHYLCARBONYLTHREONINE
C
THC
1
THR
P
CYF
9
C
CYF
9
CYS
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_554
x,y,z-1
crystal symmetry operation
27.3393556423
0.0000000000
-67.6332916031
L
O
THR
5
A
O
THR
5
L
N
ARG
24
A
N
ARG
24
L
O
ALA
19
A
O
ALA
19
L
N
ILE
80
A
N
ILE
80
L
O
ASP
75
A
O
ASP
75
L
N
SER
72
A
N
SER
72
L
O
LEU
11
A
O
LEU
11
L
N
LYS
108
A
N
LYS
108
L
O
VAL
90
A
O
VAL
90
L
N
GLN
43
A
N
GLN
43
L
O
TRP
40
A
O
TRP
40
L
N
ILE
53
A
N
ILE
53
L
O
THR
119
A
O
THR
119
L
N
ASN
142
A
N
ASN
142
L
O
ALA
135
A
O
ALA
135
L
N
LEU
186
A
N
LEU
186
L
O
SER
179
A
O
SER
179
L
N
THR
169
A
N
THR
169
L
O
ASN
150
A
O
ASN
150
L
N
THR
202
A
N
THR
202
L
O
TYR
197
A
O
TYR
197
L
N
PHE
214
A
N
PHE
214
H
O
ASN
3
B
O
ASN
3
H
N
SER
25
B
N
SER
25
H
O
VAL
18
B
O
VAL
18
H
N
LEU
83
B
N
LEU
83
H
O
THR
78
B
O
THR
78
H
N
VAL
73
B
N
VAL
73
H
O
VAL
10
B
O
VAL
10
H
N
THR
118
B
N
THR
118
H
O
MET
108
B
O
MET
108
H
N
TYR
100
B
N
TYR
100
H
O
VAL
93
B
O
VAL
93
H
N
GLN
39
B
N
GLN
39
H
O
LEU
34
B
O
LEU
34
H
N
ILE
51
B
N
ILE
51
H
O
GLY
50
B
O
GLY
50
H
N
ARG
59
B
N
ARG
59
H
O
SER
128
B
O
SER
128
H
N
LYS
151
B
N
LYS
151
H
O
VAL
144
B
O
VAL
144
H
N
VAL
191
B
N
VAL
191
H
O
SER
186
B
O
SER
186
H
N
PHE
174
B
N
PHE
174
H
O
THR
159
B
O
THR
159
H
N
ALA
206
B
N
ALA
206
H
O
CYS
203
B
O
CYS
203
H
N
LYS
216
B
N
LYS
216
1
P
C10
CYF
9
PLANAR
1
11.15
1.50
119.30
130.45
L
L
L
C
N
CA
PHE
PRO
PRO
123
124
124
Y
1
L
THR
7
-172.79
139.00
1
L
VAL
56
56.06
-51.41
1
L
ASP
87
-57.90
-7.08
1
L
ASN
143
37.38
52.26
1
L
ILE
155
-63.84
-94.68
1
L
ASP
156
-90.61
32.02
1
L
ASN
162
176.02
125.72
1
L
ASP
170
-58.25
175.19
1
L
ARG
193
-63.35
1.29
1
L
LYS
204
-23.74
-56.90
1
L
THR
205
-38.91
-29.00
1
H
VAL
2
73.23
111.98
1
H
PRO
14
-38.94
138.49
1
H
PRO
41
-36.41
-30.17
1
H
GLN
43
38.04
-67.16
1
H
PHE
64
-69.79
5.50
1
H
SER
85
25.44
64.87
1
H
TYR
100
-170.42
116.06
1
H
PHE
106
-150.60
63.14
1
H
CYS
136
67.15
-161.92
1
H
SER
142
78.65
-56.10
1
H
SER
180
47.86
82.10
1
H
SER
210
-148.14
23.29
1
H
SER
211
47.70
28.89
1
H
PRO
223
-31.85
101.92
1
H
THR
224
22.09
57.03
1
P
ASP
3
-61.19
-179.32
PARHCSDX.PRO
TOPHCSDX.PRO
CAMI.PAR
CAMI.TOP
NACE.PAR
NACE.TOP
SPEP.PAR, FLU.PAR, CD.PAR
SPEP.TOP, FLU.TOP, CD.TOP, H20.TOP
27.9
0.309
0.194
0.194
2.6
8.0
1397
14183
9.09
92.3
RANDOM
100000.00
0.1
1
RESTRAINED
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
PDB ENTRY 2HFL
0.35
8.0
0.46
2.6
8.0
17
3550
1
0
3532
0.009
1.812
26.44
1.380
3.20
1.0
3.20
1.5
3.58
1.5
3.58
2.0
0.41
0.34
2.71
163
1384
8
8.53
80.95
37.1
2.6
20.0
1MPA
15404
0.
0.054
0.054
1
16.8
6.1
97.
0.357
2.60
2.64
2.3
0.357
2.5
96.5
data reduction
DENZO
data scaling
SCALEPACK
model building
X-PLOR
refinement
X-PLOR
3.63
phasing
X-PLOR
BACTERICIDAL ANTIBODY AGAINST NEISSERIA MENINGITIDIS
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
5
N
N
5
N
N
L
SER
127
A
SER
127
HELX_P
L
SER
132
A
SER
132
1
1
6
L
LYS
188
A
LYS
188
HELX_P
L
GLU
192
A
GLU
192
1
2
5
H
THR
195
B
THR
195
HELX_P
H
GLN
199
B
GLN
199
1
3
5
disulf
2.032
L
CYS
23
A
SG
CYS
23
1_555
L
CYS
93
A
SG
CYS
93
1_555
disulf
2.035
L
CYS
139
A
SG
CYS
139
1_555
L
CYS
199
A
SG
CYS
199
1_555
disulf
2.035
L
CYS
219
A
SG
CYS
219
1_555
H
CYS
136
B
SG
CYS
136
1_555
disulf
2.000
H
CYS
22
B
SG
CYS
22
1_555
H
CYS
96
B
SG
CYS
96
1_555
disulf
2.023
H
CYS
148
B
SG
CYS
148
1_555
H
CYS
203
B
SG
CYS
203
1_555
covale
1.335
both
P
THC
1
C
C
THC
1
1_555
P
LYS
2
C
N
LYS
2
1_555
covale
1.322
both
P
LEU
8
C
C
LEU
8
1_555
P
CYF
9
C
N
CYF
9
1_555
metalc
3.062
L
HIS
98
A
ND1
HIS
98
1_555
L
CD
220
D
CD
CD
1_555
metalc
2.530
L
CD
220
D
CD
CD
1_555
L
HOH
222
E
O
HOH
1_555
metalc
2.250
L
CD
220
D
CD
CD
1_555
L
HOH
224
E
O
HOH
1_555
COMPLEX (IMMUNOGLOBULIN/PEPTIDE)
MURINE IMMUNOGLOBULIN IGG2A KAPPA, BACTERICIDAL ANTIBODY, EPITOPE P1.16 OF PORA FROM NEISSERIA MENINGITIDIS, COMPLEX (IMMUNOGLOBULIN-PEPTIDE), COMPLEX (IMMUNOGLOBULIN-PEPTIDE) complex
L
THR
7
A
THR
7
1
L
PRO
8
A
PRO
8
0.44
L
VAL
99
A
VAL
99
1
L
PRO
100
A
PRO
100
0.86
L
TYR
145
A
TYR
145
1
L
PRO
146
A
PRO
146
-0.70
H
PHE
154
B
PHE
154
1
H
PRO
155
B
PRO
155
0.79
H
TRP
196
B
TRP
196
1
H
PRO
197
B
PRO
197
-0.34
PC4203
PIR
1
1
PC4203
DVLMTQTPLSLPVSLGDQASISCRSSQSIVHTNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKI
SRVEAEDLGVYYCFQGSHVPRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER
QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
S38950
PIR
2
1
S38950
QIQLQQSGPELVRPGASVKISCKASGYTFTDYYIHWVKQRPGEGLEWIGWIYPGSGNTKYNEKFKGKATLTVDTSSSTAY
MQLSSLTSEDSAVYFCARGGKFAMDYWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNS
GSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSV
FIFPPK
1MPA
PDB
3
1MPA
1
219
1MPA
1
219
PC4203
L
1
1
219
4
221
1MPA
4
225
S38950
H
2
4
225
1
9
1MPA
1
9
1MPA
P
3
1
9
1
VAL
conflict
ILE
2
1MPA
L
PC4203
PIR
2
2
1
LEU
conflict
VAL
3
1MPA
L
PC4203
PIR
3
3
1
GLN
conflict
LYS
18
1MPA
L
PC4203
PIR
18
18
1
SER
conflict
ALA
28
1MPA
L
PC4203
PIR
28
28
1
ILE
conflict
LEU
29
1MPA
L
PC4203
PIR
29
29
1
THR
conflict
SER
32
1MPA
L
PC4203
PIR
32
32
1
GLU
conflict
HIS
39
1MPA
L
PC4203
PIR
39
39
1
TYR
conflict
PHE
91
1MPA
L
PC4203
PIR
91
91
1
TYR
conflict
PHE
92
1MPA
L
PC4203
PIR
92
92
1
PHE
conflict
SER
94
1MPA
L
PC4203
PIR
94
94
1
GLY
conflict
SER
96
1MPA
L
PC4203
PIR
96
96
1
SER
conflict
THR
97
1MPA
L
PC4203
PIR
97
97
2
PRO
conflict
THR
9
1MPA
H
S38950
PIR
9
9
2
GLU
conflict
VAL
10
1MPA
H
S38950
PIR
10
10
2
VAL
conflict
ALA
12
1MPA
H
S38950
PIR
12
12
2
LYS
conflict
ARG
19
1MPA
H
S38950
PIR
19
19
2
ILE
conflict
MET
20
1MPA
H
S38950
PIR
20
20
2
THR
conflict
SER
28
1MPA
H
S38950
PIR
28
28
2
ASP
conflict
SER
31
1MPA
H
S38950
PIR
31
31
2
TYR
conflict
TRP
33
1MPA
H
S38950
PIR
33
33
2
ILE
conflict
LEU
34
1MPA
H
S38950
PIR
34
34
2
VAL
conflict
ILE
37
1MPA
H
S38950
PIR
37
37
2
GLU
conflict
GLN
43
1MPA
H
S38950
PIR
43
43
2
TRP
conflict
GLY
50
1MPA
H
S38950
PIR
50
50
2
SER
conflict
ASN
55
1MPA
H
S38950
PIR
55
55
2
GLY
conflict
ARG
56
1MPA
H
S38950
PIR
56
56
2
ASN
conflict
ASP
57
1MPA
H
S38950
PIR
57
57
2
LYS
conflict
ARG
59
1MPA
H
S38950
PIR
59
59
2
ASN
conflict
THR
61
1MPA
H
S38950
PIR
61
61
2
GLU
conflict
GLN
62
1MPA
H
S38950
PIR
62
62
2
LYS
conflict
ARG
63
1MPA
H
S38950
PIR
63
63
2
GLY
conflict
ASP
66
1MPA
H
S38950
PIR
66
66
2
THR
conflict
LYS
69
1MPA
H
S38950
PIR
69
69
2
VAL
conflict
ALA
72
1MPA
H
S38950
PIR
72
72
2
ASP
conflict
VAL
73
1MPA
H
S38950
PIR
73
73
2
SER
conflict
ALA
76
1MPA
H
S38950
PIR
76
76
2
SER
conflict
ASN
77
1MPA
H
S38950
PIR
77
77
2
GLN
conflict
GLU
82
1MPA
H
S38950
PIR
82
82
2
SER
conflict
ASN
88
1MPA
H
S38950
PIR
88
88
2
PHE
conflict
TYR
95
1MPA
H
S38950
PIR
95
95
2
insertion
SER
97
1MPA
H
S38950
PIR
97
2
insertion
ILE
98
1MPA
H
S38950
PIR
98
2
insertion
ILE
99
1MPA
H
S38950
PIR
99
2
insertion
TYR
100
1MPA
H
S38950
PIR
100
2
ALA
conflict
PHE
101
1MPA
H
S38950
PIR
97
101
2
ARG
conflict
ASP
102
1MPA
H
S38950
PIR
98
102
2
GLY
conflict
TYR
103
1MPA
H
S38950
PIR
99
103
2
GLY
conflict
ALA
104
1MPA
H
S38950
PIR
100
104
2
LYS
conflict
ASP
105
1MPA
H
S38950
PIR
101
105
2
ALA
conflict
ILE
107
1MPA
H
S38950
PIR
103
107
2
SER
conflict
THR
116
1MPA
H
S38950
PIR
112
116
4
2
3
4
3
4
2
5
4
3
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
L
MET
4
A
MET
4
L
THR
7
A
THR
7
L
ALA
19
A
ALA
19
L
SER
25
A
SER
25
L
ASP
75
A
ASP
75
L
ILE
80
A
ILE
80
L
PHE
67
A
PHE
67
L
SER
72
A
SER
72
L
SER
10
A
SER
10
L
SER
14
A
SER
14
L
LYS
108
A
LYS
108
L
LYS
112
A
LYS
112
L
VAL
90
A
VAL
90
L
GLN
95
A
GLN
95
L
LEU
38
A
LEU
38
L
GLN
43
A
GLN
43
L
LYS
50
A
LYS
50
L
ILE
53
A
ILE
53
L
THR
119
A
THR
119
L
PHE
123
A
PHE
123
L
GLY
134
A
GLY
134
L
ASN
142
A
ASN
142
L
SER
179
A
SER
179
L
THR
187
A
THR
187
L
VAL
164
A
VAL
164
L
THR
169
A
THR
169
L
ILE
149
A
ILE
149
L
LYS
154
A
LYS
154
L
SER
196
A
SER
196
L
HIS
203
A
HIS
203
L
ILE
210
A
ILE
210
L
ASN
215
A
ASN
215
H
ASN
3
B
ASN
3
H
GLN
6
B
GLN
6
H
VAL
18
B
VAL
18
H
SER
25
B
SER
25
H
THR
78
B
THR
78
H
LEU
83
B
LEU
83
H
ALA
68
B
ALA
68
H
VAL
73
B
VAL
73
H
VAL
10
B
VAL
10
H
ALA
12
B
ALA
12
H
VAL
117
B
VAL
117
H
VAL
119
B
VAL
119
H
MET
108
B
MET
108
H
TRP
111
B
TRP
111
H
VAL
93
B
VAL
93
H
TYR
100
B
TYR
100
H
TRP
33
B
TRP
33
H
GLN
39
B
GLN
39
H
LEU
45
B
LEU
45
H
TYR
52
B
TYR
52
H
ASP
57
B
ASP
57
H
TYR
60
B
TYR
60
H
SER
128
B
SER
128
H
LEU
132
B
LEU
132
H
SER
143
B
SER
143
H
TYR
153
B
TYR
153
H
TYR
183
B
TYR
183
H
THR
192
B
THR
192
H
VAL
171
B
VAL
171
H
PHE
174
B
PHE
174
H
THR
159
B
THR
159
H
TRP
162
B
TRP
162
H
THR
202
B
THR
202
H
HIS
207
B
HIS
207
H
THR
212
B
THR
212
H
LYS
217
B
LYS
217
CD BINDING SITE.
Unknown
1
BINDING SITE FOR RESIDUE CD L 220
L
CD
220
Software
3
L
HIS
98
A
HIS
98
1
1_555
L
HIS
98
A
HIS
98
3
1_555
L
HOH
222
E
HOH
3
1_555
L
HOH
224
E
HOH
3
1_555
4
P 1 21 1