0.019646
0.000000
0.000000
0.000000
0.014979
0.000000
0.000000
0.000000
0.009999
0.00000
0.00000
0.00000
Silvaggi, N.R.
Anderson, J.W.
Brinsmade, S.R.
Pratt, R.F.
Kelly, J.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
50.900
66.760
100.011
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C11 H21 N3 O7 P -1
338.274
GLYCYL-L-A-AMINOPIMELYL-E-(D-2-AMINOETHYL)PHOSPHONATE
non-polymer
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Biochemistry
BICHAW
0033
0006-2960
42
1199
1208
10.1021/bi0268955
12564922
The Crystal Structure of Phosphonate-Inhibited
d-Ala-d-Ala Peptidase Reveals an Analogue of a Tetrahedral Transition State.
2003
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
322
111
122
10.1016/S0022-2836(02)00742-8
Structures of Two Kinetic Intermediates Reveal Species Specificity of Penicillin-Binding Proteins
2002
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
254
223
236
10.1006/jmbi.1995.0613
The Refined Crystallographic Structure of a Dd-Peptidase Penicillin-Target Enzyme at 1.6 A Resolution
1995
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
100.0
1
MIRRORS
CCD
2001-03-16
ADSC QUANTUM 4
SI(111)
SINGLE WAVELENGTH
M
x-ray
1
1.0
1.0
0.9999
1.0
X12B
NSLS
1.0
0.9999
SYNCHROTRON
NSLS BEAMLINE X12B
37422.574
D-alanyl-D-alanine carboxypeptidase
3.4.16.4
DD-Peptidase
1
nat
polymer
338.274
GLYCYL-L-A-AMINOPIMELYL-E-(D-2-AMINOETHYL)PHOSPHONATE
1
syn
non-polymer
92.094
GLYCEROL
5
syn
non-polymer
18.015
water
445
nat
water
D-ALANYL-D-ALANINE TRANSPEPTIDASE, DD- peptidase, DD-carboxypeptidase
no
no
ADLPAPDDTGLQAVLHTALSQGAPGAMVRVDDNGTIHQLSEGVADRATGRAITTTDRFRVGSVTKSFSAVVLLQLVDEGK
LDLDASVNTYLPGLLPDDRITVRQVMSHRSGLYDYTNDMFAQTVPGFESVRNKVFSYQDLITLSLKHGVTNAPGAAYSYS
NTNFVVAGMLIEKLTGHSVATEYQNRIFTPLNLTDTFYVHPDTVIPGTHANGYLTPDEAGGALVDSTEQTVSWAQSAGAV
ISSTQDLDTFFSALMSGQLMSAAQLAQMQQWTTVNSTQGYGLGLRRRDLSCGISVYGHTGTVQGYYTYAFASKDGKRSVT
ALANTSNNVNVLNTMARTLESAFCGKPTT
ADLPAPDDTGLQAVLHTALSQGAPGAMVRVDDNGTIHQLSEGVADRATGRAITTTDRFRVGSVTKSFSAVVLLQLVDEGK
LDLDASVNTYLPGLLPDDRITVRQVMSHRSGLYDYTNDMFAQTVPGFESVRNKVFSYQDLITLSLKHGVTNAPGAAYSYS
NTNFVVAGMLIEKLTGHSVATEYQNRIFTPLNLTDTFYVHPDTVIPGTHANGYLTPDEAGGALVDSTEQTVSWAQSAGAV
ISSTQDLDTFFSALMSGQLMSAAQLAQMQQWTTVNSTQGYGLGLRRRDLSCGISVYGHTGTVQGYYTYAFASKDGKRSVT
ALANTSNNVNVLNTMARTLESAFCGKPTT
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Streptomyces
sample
31952
Streptomyces sp.
R61
1
1.97
45.80
VAPOR DIFFUSION, HANGING DROP
6.80
PEG 8000, SODIUM PHOSPHATE, pH 6.80, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
software
struct_conn
repository
Initial release
Version format compliance
Source and taxonomy
Version format compliance
Data collection
Derived calculations
Refinement description
1
0
2003-02-25
1
1
2008-04-28
1
2
2011-07-13
1
3
2019-07-24
_software.classification
_software.name
_struct_conn.pdbx_leaving_atom_flag
MICHAELIS COMPLEX OF INACTIVE STREPTOMYCES R61 DD-PEPTIDASE WITH A SPECIFIC PEPTIDOGLYCAN SUBSTRATE FRAGMENT
COMPLEX OF STREPTOMYCES R61 DD-PEPTIDASE WITH THE PRODUCTS OF A SPECIFIC PEPTIDOGLYCAN SUBSTRATE FRAGMENT
RCSB
Y
RCSB
2002-09-12
REL
REL
RE1
GLYCYL-L-A-AMINOPIMELYL-E-(D-2-AMINOETHYL)PHOSPHONATE
GOL
GLYCEROL
HOH
water
RE1
400
2
RE1
RE1
400
A
GOL
500
3
GOL
GOL
500
A
GOL
501
3
GOL
GOL
501
A
GOL
502
3
GOL
GOL
502
A
GOL
503
3
GOL
GOL
503
A
GOL
504
3
GOL
GOL
504
A
HOH
1001
4
HOH
HOH
1001
A
HOH
1002
4
HOH
HOH
1002
A
HOH
1003
4
HOH
HOH
1003
A
HOH
1004
4
HOH
HOH
1004
A
HOH
1005
4
HOH
HOH
1005
A
HOH
1006
4
HOH
HOH
1006
A
HOH
1007
4
HOH
HOH
1007
A
HOH
1008
4
HOH
HOH
1008
A
HOH
1009
4
HOH
HOH
1009
A
HOH
1010
4
HOH
HOH
1010
A
HOH
1011
4
HOH
HOH
1011
A
HOH
1012
4
HOH
HOH
1012
A
HOH
1013
4
HOH
HOH
1013
A
HOH
1014
4
HOH
HOH
1014
A
HOH
1015
4
HOH
HOH
1015
A
HOH
1016
4
HOH
HOH
1016
A
HOH
1017
4
HOH
HOH
1017
A
HOH
1018
4
HOH
HOH
1018
A
HOH
1019
4
HOH
HOH
1019
A
HOH
1020
4
HOH
HOH
1020
A
HOH
1021
4
HOH
HOH
1021
A
HOH
1022
4
HOH
HOH
1022
A
HOH
1023
4
HOH
HOH
1023
A
HOH
1024
4
HOH
HOH
1024
A
HOH
1025
4
HOH
HOH
1025
A
HOH
1026
4
HOH
HOH
1026
A
HOH
1027
4
HOH
HOH
1027
A
HOH
1028
4
HOH
HOH
1028
A
HOH
1029
4
HOH
HOH
1029
A
HOH
1030
4
HOH
HOH
1030
A
HOH
1031
4
HOH
HOH
1031
A
HOH
1032
4
HOH
HOH
1032
A
HOH
1033
4
HOH
HOH
1033
A
HOH
1034
4
HOH
HOH
1034
A
HOH
1035
4
HOH
HOH
1035
A
HOH
1036
4
HOH
HOH
1036
A
HOH
1037
4
HOH
HOH
1037
A
HOH
1038
4
HOH
HOH
1038
A
HOH
1039
4
HOH
HOH
1039
A
HOH
1040
4
HOH
HOH
1040
A
HOH
1041
4
HOH
HOH
1041
A
HOH
1042
4
HOH
HOH
1042
A
HOH
1043
4
HOH
HOH
1043
A
HOH
1044
4
HOH
HOH
1044
A
HOH
1045
4
HOH
HOH
1045
A
HOH
1046
4
HOH
HOH
1046
A
HOH
1047
4
HOH
HOH
1047
A
HOH
1048
4
HOH
HOH
1048
A
HOH
1049
4
HOH
HOH
1049
A
HOH
1050
4
HOH
HOH
1050
A
HOH
1051
4
HOH
HOH
1051
A
HOH
1052
4
HOH
HOH
1052
A
HOH
1053
4
HOH
HOH
1053
A
HOH
1054
4
HOH
HOH
1054
A
HOH
1055
4
HOH
HOH
1055
A
HOH
1056
4
HOH
HOH
1056
A
HOH
1057
4
HOH
HOH
1057
A
HOH
1058
4
HOH
HOH
1058
A
HOH
1059
4
HOH
HOH
1059
A
HOH
1060
4
HOH
HOH
1060
A
HOH
1061
4
HOH
HOH
1061
A
HOH
1062
4
HOH
HOH
1062
A
HOH
1063
4
HOH
HOH
1063
A
HOH
1064
4
HOH
HOH
1064
A
HOH
1065
4
HOH
HOH
1065
A
HOH
1066
4
HOH
HOH
1066
A
HOH
1067
4
HOH
HOH
1067
A
HOH
1068
4
HOH
HOH
1068
A
HOH
1069
4
HOH
HOH
1069
A
HOH
1070
4
HOH
HOH
1070
A
HOH
1071
4
HOH
HOH
1071
A
HOH
1072
4
HOH
HOH
1072
A
HOH
1073
4
HOH
HOH
1073
A
HOH
1074
4
HOH
HOH
1074
A
HOH
1075
4
HOH
HOH
1075
A
HOH
1076
4
HOH
HOH
1076
A
HOH
1077
4
HOH
HOH
1077
A
HOH
1078
4
HOH
HOH
1078
A
HOH
1079
4
HOH
HOH
1079
A
HOH
1080
4
HOH
HOH
1080
A
HOH
1081
4
HOH
HOH
1081
A
HOH
1082
4
HOH
HOH
1082
A
HOH
1083
4
HOH
HOH
1083
A
HOH
1084
4
HOH
HOH
1084
A
HOH
1085
4
HOH
HOH
1085
A
HOH
1086
4
HOH
HOH
1086
A
HOH
1087
4
HOH
HOH
1087
A
HOH
1088
4
HOH
HOH
1088
A
HOH
1089
4
HOH
HOH
1089
A
HOH
1090
4
HOH
HOH
1090
A
HOH
1091
4
HOH
HOH
1091
A
HOH
1092
4
HOH
HOH
1092
A
HOH
1093
4
HOH
HOH
1093
A
HOH
1094
4
HOH
HOH
1094
A
HOH
1095
4
HOH
HOH
1095
A
HOH
1096
4
HOH
HOH
1096
A
HOH
1097
4
HOH
HOH
1097
A
HOH
1098
4
HOH
HOH
1098
A
HOH
1099
4
HOH
HOH
1099
A
HOH
1100
4
HOH
HOH
1100
A
HOH
1101
4
HOH
HOH
1101
A
HOH
1102
4
HOH
HOH
1102
A
HOH
1103
4
HOH
HOH
1103
A
HOH
1104
4
HOH
HOH
1104
A
HOH
1105
4
HOH
HOH
1105
A
HOH
1106
4
HOH
HOH
1106
A
HOH
1107
4
HOH
HOH
1107
A
HOH
1108
4
HOH
HOH
1108
A
HOH
1109
4
HOH
HOH
1109
A
HOH
1110
4
HOH
HOH
1110
A
HOH
1111
4
HOH
HOH
1111
A
HOH
1112
4
HOH
HOH
1112
A
HOH
1113
4
HOH
HOH
1113
A
HOH
1114
4
HOH
HOH
1114
A
HOH
1115
4
HOH
HOH
1115
A
HOH
1116
4
HOH
HOH
1116
A
HOH
1117
4
HOH
HOH
1117
A
HOH
1118
4
HOH
HOH
1118
A
HOH
1119
4
HOH
HOH
1119
A
HOH
1120
4
HOH
HOH
1120
A
HOH
1121
4
HOH
HOH
1121
A
HOH
1122
4
HOH
HOH
1122
A
HOH
1123
4
HOH
HOH
1123
A
HOH
1124
4
HOH
HOH
1124
A
HOH
1125
4
HOH
HOH
1125
A
HOH
1126
4
HOH
HOH
1126
A
HOH
1127
4
HOH
HOH
1127
A
HOH
1128
4
HOH
HOH
1128
A
HOH
1129
4
HOH
HOH
1129
A
HOH
1130
4
HOH
HOH
1130
A
HOH
1131
4
HOH
HOH
1131
A
HOH
1132
4
HOH
HOH
1132
A
HOH
1133
4
HOH
HOH
1133
A
HOH
1134
4
HOH
HOH
1134
A
HOH
1135
4
HOH
HOH
1135
A
HOH
1136
4
HOH
HOH
1136
A
HOH
1137
4
HOH
HOH
1137
A
HOH
1138
4
HOH
HOH
1138
A
HOH
1139
4
HOH
HOH
1139
A
HOH
1140
4
HOH
HOH
1140
A
HOH
1141
4
HOH
HOH
1141
A
HOH
1142
4
HOH
HOH
1142
A
HOH
1143
4
HOH
HOH
1143
A
HOH
1144
4
HOH
HOH
1144
A
HOH
1145
4
HOH
HOH
1145
A
HOH
1146
4
HOH
HOH
1146
A
HOH
1147
4
HOH
HOH
1147
A
HOH
1148
4
HOH
HOH
1148
A
HOH
1149
4
HOH
HOH
1149
A
HOH
1150
4
HOH
HOH
1150
A
HOH
1151
4
HOH
HOH
1151
A
HOH
1152
4
HOH
HOH
1152
A
HOH
1153
4
HOH
HOH
1153
A
HOH
1154
4
HOH
HOH
1154
A
HOH
1155
4
HOH
HOH
1155
A
HOH
1156
4
HOH
HOH
1156
A
HOH
1157
4
HOH
HOH
1157
A
HOH
1158
4
HOH
HOH
1158
A
HOH
1159
4
HOH
HOH
1159
A
HOH
1160
4
HOH
HOH
1160
A
HOH
1161
4
HOH
HOH
1161
A
HOH
1162
4
HOH
HOH
1162
A
HOH
1163
4
HOH
HOH
1163
A
HOH
1164
4
HOH
HOH
1164
A
HOH
1165
4
HOH
HOH
1165
A
HOH
1166
4
HOH
HOH
1166
A
HOH
1167
4
HOH
HOH
1167
A
HOH
1168
4
HOH
HOH
1168
A
HOH
1169
4
HOH
HOH
1169
A
HOH
1170
4
HOH
HOH
1170
A
HOH
1171
4
HOH
HOH
1171
A
HOH
1172
4
HOH
HOH
1172
A
HOH
1173
4
HOH
HOH
1173
A
HOH
1174
4
HOH
HOH
1174
A
HOH
1175
4
HOH
HOH
1175
A
HOH
1176
4
HOH
HOH
1176
A
HOH
1177
4
HOH
HOH
1177
A
HOH
1178
4
HOH
HOH
1178
A
HOH
1179
4
HOH
HOH
1179
A
HOH
1180
4
HOH
HOH
1180
A
HOH
1181
4
HOH
HOH
1181
A
HOH
1182
4
HOH
HOH
1182
A
HOH
1183
4
HOH
HOH
1183
A
HOH
1184
4
HOH
HOH
1184
A
HOH
1185
4
HOH
HOH
1185
A
HOH
1186
4
HOH
HOH
1186
A
HOH
1187
4
HOH
HOH
1187
A
HOH
1188
4
HOH
HOH
1188
A
HOH
1189
4
HOH
HOH
1189
A
HOH
1190
4
HOH
HOH
1190
A
HOH
1191
4
HOH
HOH
1191
A
HOH
1192
4
HOH
HOH
1192
A
HOH
1193
4
HOH
HOH
1193
A
HOH
1194
4
HOH
HOH
1194
A
HOH
1195
4
HOH
HOH
1195
A
HOH
1196
4
HOH
HOH
1196
A
HOH
1197
4
HOH
HOH
1197
A
HOH
1198
4
HOH
HOH
1198
A
HOH
1199
4
HOH
HOH
1199
A
HOH
1200
4
HOH
HOH
1200
A
HOH
1201
4
HOH
HOH
1201
A
HOH
1202
4
HOH
HOH
1202
A
HOH
1203
4
HOH
HOH
1203
A
HOH
1204
4
HOH
HOH
1204
A
HOH
1205
4
HOH
HOH
1205
A
HOH
1206
4
HOH
HOH
1206
A
HOH
1207
4
HOH
HOH
1207
A
HOH
1208
4
HOH
HOH
1208
A
HOH
1209
4
HOH
HOH
1209
A
HOH
1210
4
HOH
HOH
1210
A
HOH
1211
4
HOH
HOH
1211
A
HOH
1212
4
HOH
HOH
1212
A
HOH
1213
4
HOH
HOH
1213
A
HOH
1214
4
HOH
HOH
1214
A
HOH
1215
4
HOH
HOH
1215
A
HOH
1216
4
HOH
HOH
1216
A
HOH
1217
4
HOH
HOH
1217
A
HOH
1218
4
HOH
HOH
1218
A
HOH
1219
4
HOH
HOH
1219
A
HOH
1220
4
HOH
HOH
1220
A
HOH
1221
4
HOH
HOH
1221
A
HOH
1222
4
HOH
HOH
1222
A
HOH
1223
4
HOH
HOH
1223
A
HOH
1224
4
HOH
HOH
1224
A
HOH
1225
4
HOH
HOH
1225
A
HOH
1226
4
HOH
HOH
1226
A
HOH
1227
4
HOH
HOH
1227
A
HOH
1228
4
HOH
HOH
1228
A
HOH
1229
4
HOH
HOH
1229
A
HOH
1230
4
HOH
HOH
1230
A
HOH
1231
4
HOH
HOH
1231
A
HOH
1232
4
HOH
HOH
1232
A
HOH
1233
4
HOH
HOH
1233
A
HOH
1234
4
HOH
HOH
1234
A
HOH
1235
4
HOH
HOH
1235
A
HOH
1236
4
HOH
HOH
1236
A
HOH
1237
4
HOH
HOH
1237
A
HOH
1238
4
HOH
HOH
1238
A
HOH
1239
4
HOH
HOH
1239
A
HOH
1240
4
HOH
HOH
1240
A
HOH
1241
4
HOH
HOH
1241
A
HOH
1242
4
HOH
HOH
1242
A
HOH
1243
4
HOH
HOH
1243
A
HOH
1244
4
HOH
HOH
1244
A
HOH
1245
4
HOH
HOH
1245
A
HOH
1246
4
HOH
HOH
1246
A
HOH
1247
4
HOH
HOH
1247
A
HOH
1248
4
HOH
HOH
1248
A
HOH
1249
4
HOH
HOH
1249
A
HOH
1250
4
HOH
HOH
1250
A
HOH
1251
4
HOH
HOH
1251
A
HOH
1252
4
HOH
HOH
1252
A
HOH
1253
4
HOH
HOH
1253
A
HOH
1254
4
HOH
HOH
1254
A
HOH
1255
4
HOH
HOH
1255
A
HOH
1256
4
HOH
HOH
1256
A
HOH
1257
4
HOH
HOH
1257
A
HOH
1258
4
HOH
HOH
1258
A
HOH
1259
4
HOH
HOH
1259
A
HOH
1260
4
HOH
HOH
1260
A
HOH
1261
4
HOH
HOH
1261
A
HOH
1262
4
HOH
HOH
1262
A
HOH
1263
4
HOH
HOH
1263
A
HOH
1264
4
HOH
HOH
1264
A
HOH
1265
4
HOH
HOH
1265
A
HOH
1266
4
HOH
HOH
1266
A
HOH
1267
4
HOH
HOH
1267
A
HOH
1268
4
HOH
HOH
1268
A
HOH
1269
4
HOH
HOH
1269
A
HOH
1270
4
HOH
HOH
1270
A
HOH
1271
4
HOH
HOH
1271
A
HOH
1272
4
HOH
HOH
1272
A
HOH
1273
4
HOH
HOH
1273
A
HOH
1274
4
HOH
HOH
1274
A
HOH
1275
4
HOH
HOH
1275
A
HOH
1276
4
HOH
HOH
1276
A
HOH
1277
4
HOH
HOH
1277
A
HOH
1278
4
HOH
HOH
1278
A
HOH
1279
4
HOH
HOH
1279
A
HOH
1280
4
HOH
HOH
1280
A
HOH
1281
4
HOH
HOH
1281
A
HOH
1282
4
HOH
HOH
1282
A
HOH
1283
4
HOH
HOH
1283
A
HOH
1284
4
HOH
HOH
1284
A
HOH
1285
4
HOH
HOH
1285
A
HOH
1286
4
HOH
HOH
1286
A
HOH
1287
4
HOH
HOH
1287
A
HOH
1288
4
HOH
HOH
1288
A
HOH
1289
4
HOH
HOH
1289
A
HOH
1290
4
HOH
HOH
1290
A
HOH
1291
4
HOH
HOH
1291
A
HOH
1292
4
HOH
HOH
1292
A
HOH
1293
4
HOH
HOH
1293
A
HOH
1294
4
HOH
HOH
1294
A
HOH
1295
4
HOH
HOH
1295
A
HOH
1296
4
HOH
HOH
1296
A
HOH
1297
4
HOH
HOH
1297
A
HOH
1298
4
HOH
HOH
1298
A
HOH
1299
4
HOH
HOH
1299
A
HOH
1300
4
HOH
HOH
1300
A
HOH
1301
4
HOH
HOH
1301
A
HOH
1302
4
HOH
HOH
1302
A
HOH
1303
4
HOH
HOH
1303
A
HOH
1304
4
HOH
HOH
1304
A
HOH
1305
4
HOH
HOH
1305
A
HOH
1306
4
HOH
HOH
1306
A
HOH
1307
4
HOH
HOH
1307
A
HOH
1308
4
HOH
HOH
1308
A
HOH
1309
4
HOH
HOH
1309
A
HOH
1310
4
HOH
HOH
1310
A
HOH
1311
4
HOH
HOH
1311
A
HOH
1312
4
HOH
HOH
1312
A
HOH
1313
4
HOH
HOH
1313
A
HOH
1314
4
HOH
HOH
1314
A
HOH
1315
4
HOH
HOH
1315
A
HOH
1316
4
HOH
HOH
1316
A
HOH
1317
4
HOH
HOH
1317
A
HOH
1318
4
HOH
HOH
1318
A
HOH
1319
4
HOH
HOH
1319
A
HOH
1320
4
HOH
HOH
1320
A
HOH
1321
4
HOH
HOH
1321
A
HOH
1322
4
HOH
HOH
1322
A
HOH
1323
4
HOH
HOH
1323
A
HOH
1324
4
HOH
HOH
1324
A
HOH
1325
4
HOH
HOH
1325
A
HOH
1326
4
HOH
HOH
1326
A
HOH
1327
4
HOH
HOH
1327
A
HOH
1328
4
HOH
HOH
1328
A
HOH
1329
4
HOH
HOH
1329
A
HOH
1330
4
HOH
HOH
1330
A
HOH
1331
4
HOH
HOH
1331
A
HOH
1332
4
HOH
HOH
1332
A
HOH
1333
4
HOH
HOH
1333
A
HOH
1334
4
HOH
HOH
1334
A
HOH
1335
4
HOH
HOH
1335
A
HOH
1336
4
HOH
HOH
1336
A
HOH
1337
4
HOH
HOH
1337
A
HOH
1338
4
HOH
HOH
1338
A
HOH
1339
4
HOH
HOH
1339
A
HOH
1340
4
HOH
HOH
1340
A
HOH
1341
4
HOH
HOH
1341
A
HOH
1342
4
HOH
HOH
1342
A
HOH
1343
4
HOH
HOH
1343
A
HOH
1344
4
HOH
HOH
1344
A
HOH
1345
4
HOH
HOH
1345
A
HOH
1346
4
HOH
HOH
1346
A
HOH
1347
4
HOH
HOH
1347
A
HOH
1348
4
HOH
HOH
1348
A
HOH
1349
4
HOH
HOH
1349
A
HOH
1350
4
HOH
HOH
1350
A
HOH
1351
4
HOH
HOH
1351
A
HOH
1352
4
HOH
HOH
1352
A
HOH
1353
4
HOH
HOH
1353
A
HOH
1354
4
HOH
HOH
1354
A
HOH
1355
4
HOH
HOH
1355
A
HOH
1356
4
HOH
HOH
1356
A
HOH
1357
4
HOH
HOH
1357
A
HOH
1358
4
HOH
HOH
1358
A
HOH
1359
4
HOH
HOH
1359
A
HOH
1360
4
HOH
HOH
1360
A
HOH
1361
4
HOH
HOH
1361
A
HOH
1362
4
HOH
HOH
1362
A
HOH
1363
4
HOH
HOH
1363
A
HOH
1364
4
HOH
HOH
1364
A
HOH
1365
4
HOH
HOH
1365
A
HOH
1366
4
HOH
HOH
1366
A
HOH
1367
4
HOH
HOH
1367
A
HOH
1368
4
HOH
HOH
1368
A
HOH
1369
4
HOH
HOH
1369
A
HOH
1370
4
HOH
HOH
1370
A
HOH
1371
4
HOH
HOH
1371
A
HOH
1372
4
HOH
HOH
1372
A
HOH
1373
4
HOH
HOH
1373
A
HOH
1374
4
HOH
HOH
1374
A
HOH
1375
4
HOH
HOH
1375
A
HOH
1376
4
HOH
HOH
1376
A
HOH
1377
4
HOH
HOH
1377
A
HOH
1378
4
HOH
HOH
1378
A
HOH
1379
4
HOH
HOH
1379
A
HOH
1380
4
HOH
HOH
1380
A
HOH
1381
4
HOH
HOH
1381
A
HOH
1382
4
HOH
HOH
1382
A
HOH
1383
4
HOH
HOH
1383
A
HOH
1384
4
HOH
HOH
1384
A
HOH
1385
4
HOH
HOH
1385
A
HOH
1386
4
HOH
HOH
1386
A
HOH
1387
4
HOH
HOH
1387
A
HOH
1388
4
HOH
HOH
1388
A
HOH
1389
4
HOH
HOH
1389
A
HOH
1390
4
HOH
HOH
1390
A
HOH
1391
4
HOH
HOH
1391
A
HOH
1392
4
HOH
HOH
1392
A
HOH
1393
4
HOH
HOH
1393
A
HOH
1394
4
HOH
HOH
1394
A
HOH
1395
4
HOH
HOH
1395
A
HOH
1396
4
HOH
HOH
1396
A
HOH
1397
4
HOH
HOH
1397
A
HOH
1398
4
HOH
HOH
1398
A
HOH
1399
4
HOH
HOH
1399
A
HOH
1400
4
HOH
HOH
1400
A
HOH
1401
4
HOH
HOH
1401
A
HOH
1402
4
HOH
HOH
1402
A
HOH
1403
4
HOH
HOH
1403
A
HOH
1404
4
HOH
HOH
1404
A
HOH
1405
4
HOH
HOH
1405
A
HOH
1406
4
HOH
HOH
1406
A
HOH
1407
4
HOH
HOH
1407
A
HOH
1408
4
HOH
HOH
1408
A
HOH
1409
4
HOH
HOH
1409
A
HOH
1410
4
HOH
HOH
1410
A
HOH
1411
4
HOH
HOH
1411
A
HOH
1412
4
HOH
HOH
1412
A
HOH
1413
4
HOH
HOH
1413
A
HOH
1414
4
HOH
HOH
1414
A
HOH
1415
4
HOH
HOH
1415
A
HOH
1416
4
HOH
HOH
1416
A
HOH
1417
4
HOH
HOH
1417
A
HOH
1418
4
HOH
HOH
1418
A
HOH
1419
4
HOH
HOH
1419
A
HOH
1420
4
HOH
HOH
1420
A
HOH
1421
4
HOH
HOH
1421
A
HOH
1422
4
HOH
HOH
1422
A
HOH
1423
4
HOH
HOH
1423
A
HOH
1424
4
HOH
HOH
1424
A
HOH
1425
4
HOH
HOH
1425
A
HOH
1426
4
HOH
HOH
1426
A
HOH
1427
4
HOH
HOH
1427
A
HOH
1428
4
HOH
HOH
1428
A
HOH
1429
4
HOH
HOH
1429
A
HOH
1430
4
HOH
HOH
1430
A
HOH
1431
4
HOH
HOH
1431
A
HOH
1432
4
HOH
HOH
1432
A
HOH
1433
4
HOH
HOH
1433
A
HOH
1434
4
HOH
HOH
1434
A
HOH
1435
4
HOH
HOH
1435
A
HOH
1436
4
HOH
HOH
1436
A
HOH
1437
4
HOH
HOH
1437
A
HOH
1438
4
HOH
HOH
1438
A
HOH
1439
4
HOH
HOH
1439
A
HOH
1440
4
HOH
HOH
1440
A
HOH
1441
4
HOH
HOH
1441
A
HOH
1442
4
HOH
HOH
1442
A
HOH
1443
4
HOH
HOH
1443
A
HOH
1444
4
HOH
HOH
1444
A
HOH
1445
4
HOH
HOH
1445
A
n
1
1
A
n
2
2
A
LEU
3
n
3
LEU
3
A
PRO
4
n
4
PRO
4
A
ALA
5
n
5
ALA
5
A
PRO
6
n
6
PRO
6
A
ASP
7
n
7
ASP
7
A
ASP
8
n
8
ASP
8
A
THR
9
n
9
THR
9
A
GLY
10
n
10
GLY
10
A
LEU
11
n
11
LEU
11
A
GLN
12
n
12
GLN
12
A
ALA
13
n
13
ALA
13
A
VAL
14
n
14
VAL
14
A
LEU
15
n
15
LEU
15
A
HIS
16
n
16
HIS
16
A
THR
17
n
17
THR
17
A
ALA
18
n
18
ALA
18
A
LEU
19
n
19
LEU
19
A
SER
20
n
20
SER
20
A
GLN
21
n
21
GLN
21
A
GLY
22
n
22
GLY
22
A
ALA
23
n
23
ALA
23
A
PRO
24
n
24
PRO
24
A
GLY
25
n
25
GLY
25
A
ALA
26
n
26
ALA
26
A
MET
27
n
27
MET
27
A
VAL
28
n
28
VAL
28
A
ARG
29
n
29
ARG
29
A
VAL
30
n
30
VAL
30
A
ASP
31
n
31
ASP
31
A
ASP
32
n
32
ASP
32
A
ASN
33
n
33
ASN
33
A
GLY
34
n
34
GLY
34
A
THR
35
n
35
THR
35
A
ILE
36
n
36
ILE
36
A
HIS
37
n
37
HIS
37
A
GLN
38
n
38
GLN
38
A
LEU
39
n
39
LEU
39
A
SER
40
n
40
SER
40
A
GLU
41
n
41
GLU
41
A
GLY
42
n
42
GLY
42
A
VAL
43
n
43
VAL
43
A
ALA
44
n
44
ALA
44
A
ASP
45
n
45
ASP
45
A
ARG
46
n
46
ARG
46
A
ALA
47
n
47
ALA
47
A
THR
48
n
48
THR
48
A
GLY
49
n
49
GLY
49
A
ARG
50
n
50
ARG
50
A
ALA
51
n
51
ALA
51
A
ILE
52
n
52
ILE
52
A
THR
53
n
53
THR
53
A
THR
54
n
54
THR
54
A
THR
55
n
55
THR
55
A
ASP
56
n
56
ASP
56
A
ARG
57
n
57
ARG
57
A
PHE
58
n
58
PHE
58
A
ARG
59
n
59
ARG
59
A
VAL
60
n
60
VAL
60
A
GLY
61
n
61
GLY
61
A
SER
62
n
62
SER
62
A
VAL
63
n
63
VAL
63
A
THR
64
n
64
THR
64
A
LYS
65
n
65
LYS
65
A
SER
66
n
66
SER
66
A
PHE
67
n
67
PHE
67
A
SER
68
n
68
SER
68
A
ALA
69
n
69
ALA
69
A
VAL
70
n
70
VAL
70
A
VAL
71
n
71
VAL
71
A
LEU
72
n
72
LEU
72
A
LEU
73
n
73
LEU
73
A
GLN
74
n
74
GLN
74
A
LEU
75
n
75
LEU
75
A
VAL
76
n
76
VAL
76
A
ASP
77
n
77
ASP
77
A
GLU
78
n
78
GLU
78
A
GLY
79
n
79
GLY
79
A
LYS
80
n
80
LYS
80
A
LEU
81
n
81
LEU
81
A
ASP
82
n
82
ASP
82
A
LEU
83
n
83
LEU
83
A
ASP
84
n
84
ASP
84
A
ALA
85
n
85
ALA
85
A
SER
86
n
86
SER
86
A
VAL
87
n
87
VAL
87
A
ASN
88
n
88
ASN
88
A
THR
89
n
89
THR
89
A
TYR
90
n
90
TYR
90
A
LEU
91
n
91
LEU
91
A
PRO
92
n
92
PRO
92
A
GLY
93
n
93
GLY
93
A
LEU
94
n
94
LEU
94
A
LEU
95
n
95
LEU
95
A
PRO
96
n
96
PRO
96
A
ASP
97
n
97
ASP
97
A
ASP
98
n
98
ASP
98
A
ARG
99
n
99
ARG
99
A
ILE
100
n
100
ILE
100
A
THR
101
n
101
THR
101
A
VAL
102
n
102
VAL
102
A
ARG
103
n
103
ARG
103
A
GLN
104
n
104
GLN
104
A
VAL
105
n
105
VAL
105
A
MET
106
n
106
MET
106
A
SER
107
n
107
SER
107
A
HIS
108
n
108
HIS
108
A
ARG
109
n
109
ARG
109
A
SER
110
n
110
SER
110
A
GLY
111
n
111
GLY
111
A
LEU
112
n
112
LEU
112
A
TYR
113
n
113
TYR
113
A
ASP
114
n
114
ASP
114
A
TYR
115
n
115
TYR
115
A
THR
116
n
116
THR
116
A
ASN
117
n
117
ASN
117
A
ASP
118
n
118
ASP
118
A
MET
119
n
119
MET
119
A
PHE
120
n
120
PHE
120
A
ALA
121
n
121
ALA
121
A
GLN
122
n
122
GLN
122
A
THR
123
n
123
THR
123
A
VAL
124
n
124
VAL
124
A
PRO
125
n
125
PRO
125
A
GLY
126
n
126
GLY
126
A
PHE
127
n
127
PHE
127
A
GLU
128
n
128
GLU
128
A
SER
129
n
129
SER
129
A
VAL
130
n
130
VAL
130
A
ARG
131
n
131
ARG
131
A
ASN
132
n
132
ASN
132
A
LYS
133
n
133
LYS
133
A
VAL
134
n
134
VAL
134
A
PHE
135
n
135
PHE
135
A
SER
136
n
136
SER
136
A
TYR
137
n
137
TYR
137
A
GLN
138
n
138
GLN
138
A
ASP
139
n
139
ASP
139
A
LEU
140
n
140
LEU
140
A
ILE
141
n
141
ILE
141
A
THR
142
n
142
THR
142
A
LEU
143
n
143
LEU
143
A
SER
144
n
144
SER
144
A
LEU
145
n
145
LEU
145
A
LYS
146
n
146
LYS
146
A
HIS
147
n
147
HIS
147
A
GLY
148
n
148
GLY
148
A
VAL
149
n
149
VAL
149
A
THR
150
n
150
THR
150
A
ASN
151
n
151
ASN
151
A
ALA
152
n
152
ALA
152
A
PRO
153
n
153
PRO
153
A
GLY
154
n
154
GLY
154
A
ALA
155
n
155
ALA
155
A
ALA
156
n
156
ALA
156
A
TYR
157
n
157
TYR
157
A
SER
158
n
158
SER
158
A
TYR
159
n
159
TYR
159
A
SER
160
n
160
SER
160
A
ASN
161
n
161
ASN
161
A
THR
162
n
162
THR
162
A
ASN
163
n
163
ASN
163
A
PHE
164
n
164
PHE
164
A
VAL
165
n
165
VAL
165
A
VAL
166
n
166
VAL
166
A
ALA
167
n
167
ALA
167
A
GLY
168
n
168
GLY
168
A
MET
169
n
169
MET
169
A
LEU
170
n
170
LEU
170
A
ILE
171
n
171
ILE
171
A
GLU
172
n
172
GLU
172
A
LYS
173
n
173
LYS
173
A
LEU
174
n
174
LEU
174
A
THR
175
n
175
THR
175
A
GLY
176
n
176
GLY
176
A
HIS
177
n
177
HIS
177
A
SER
178
n
178
SER
178
A
VAL
179
n
179
VAL
179
A
ALA
180
n
180
ALA
180
A
THR
181
n
181
THR
181
A
GLU
182
n
182
GLU
182
A
TYR
183
n
183
TYR
183
A
GLN
184
n
184
GLN
184
A
ASN
185
n
185
ASN
185
A
ARG
186
n
186
ARG
186
A
ILE
187
n
187
ILE
187
A
PHE
188
n
188
PHE
188
A
THR
189
n
189
THR
189
A
PRO
190
n
190
PRO
190
A
LEU
191
n
191
LEU
191
A
ASN
192
n
192
ASN
192
A
LEU
193
n
193
LEU
193
A
THR
194
n
194
THR
194
A
ASP
195
n
195
ASP
195
A
THR
196
n
196
THR
196
A
PHE
197
n
197
PHE
197
A
TYR
198
n
198
TYR
198
A
VAL
199
n
199
VAL
199
A
HIS
200
n
200
HIS
200
A
PRO
201
n
201
PRO
201
A
ASP
202
n
202
ASP
202
A
THR
203
n
203
THR
203
A
VAL
204
n
204
VAL
204
A
ILE
205
n
205
ILE
205
A
PRO
206
n
206
PRO
206
A
GLY
207
n
207
GLY
207
A
THR
208
n
208
THR
208
A
HIS
209
n
209
HIS
209
A
ALA
210
n
210
ALA
210
A
ASN
211
n
211
ASN
211
A
GLY
212
n
212
GLY
212
A
TYR
213
n
213
TYR
213
A
LEU
214
n
214
LEU
214
A
THR
215
n
215
THR
215
A
PRO
216
n
216
PRO
216
A
ASP
217
n
217
ASP
217
A
GLU
218
n
218
GLU
218
A
ALA
219
n
219
ALA
219
A
GLY
220
n
220
GLY
220
A
GLY
221
n
221
GLY
221
A
ALA
222
n
222
ALA
222
A
LEU
223
n
223
LEU
223
A
VAL
224
n
224
VAL
224
A
ASP
225
n
225
ASP
225
A
SER
226
n
226
SER
226
A
THR
227
n
227
THR
227
A
GLU
228
n
228
GLU
228
A
GLN
229
n
229
GLN
229
A
THR
230
n
230
THR
230
A
VAL
231
n
231
VAL
231
A
SER
232
n
232
SER
232
A
TRP
233
n
233
TRP
233
A
ALA
234
n
234
ALA
234
A
GLN
235
n
235
GLN
235
A
SER
236
n
236
SER
236
A
ALA
237
n
237
ALA
237
A
GLY
238
n
238
GLY
238
A
ALA
239
n
239
ALA
239
A
VAL
240
n
240
VAL
240
A
ILE
241
n
241
ILE
241
A
SER
242
n
242
SER
242
A
SER
243
n
243
SER
243
A
THR
244
n
244
THR
244
A
GLN
245
n
245
GLN
245
A
ASP
246
n
246
ASP
246
A
LEU
247
n
247
LEU
247
A
ASP
248
n
248
ASP
248
A
THR
249
n
249
THR
249
A
PHE
250
n
250
PHE
250
A
PHE
251
n
251
PHE
251
A
SER
252
n
252
SER
252
A
ALA
253
n
253
ALA
253
A
LEU
254
n
254
LEU
254
A
MET
255
n
255
MET
255
A
SER
256
n
256
SER
256
A
GLY
257
n
257
GLY
257
A
GLN
258
n
258
GLN
258
A
LEU
259
n
259
LEU
259
A
MET
260
n
260
MET
260
A
SER
261
n
261
SER
261
A
ALA
262
n
262
ALA
262
A
ALA
263
n
263
ALA
263
A
GLN
264
n
264
GLN
264
A
LEU
265
n
265
LEU
265
A
ALA
266
n
266
ALA
266
A
GLN
267
n
267
GLN
267
A
MET
268
n
268
MET
268
A
GLN
269
n
269
GLN
269
A
GLN
270
n
270
GLN
270
A
TRP
271
n
271
TRP
271
A
THR
272
n
272
THR
272
A
THR
273
n
273
THR
273
A
VAL
274
n
274
VAL
274
A
ASN
275
n
275
ASN
275
A
SER
276
n
276
SER
276
A
THR
277
n
277
THR
277
A
GLN
278
n
278
GLN
278
A
GLY
279
n
279
GLY
279
A
TYR
280
n
280
TYR
280
A
GLY
281
n
281
GLY
281
A
LEU
282
n
282
LEU
282
A
GLY
283
n
283
GLY
283
A
LEU
284
n
284
LEU
284
A
ARG
285
n
285
ARG
285
A
ARG
286
n
286
ARG
286
A
ARG
287
n
287
ARG
287
A
ASP
288
n
288
ASP
288
A
LEU
289
n
289
LEU
289
A
SER
290
n
290
SER
290
A
CYS
291
n
291
CYS
291
A
GLY
292
n
292
GLY
292
A
ILE
293
n
293
ILE
293
A
SER
294
n
294
SER
294
A
VAL
295
n
295
VAL
295
A
TYR
296
n
296
TYR
296
A
GLY
297
n
297
GLY
297
A
HIS
298
n
298
HIS
298
A
THR
299
n
299
THR
299
A
GLY
300
n
300
GLY
300
A
THR
301
n
301
THR
301
A
VAL
302
n
302
VAL
302
A
GLN
303
n
303
GLN
303
A
GLY
304
n
304
GLY
304
A
TYR
305
n
305
TYR
305
A
TYR
306
n
306
TYR
306
A
THR
307
n
307
THR
307
A
TYR
308
n
308
TYR
308
A
ALA
309
n
309
ALA
309
A
PHE
310
n
310
PHE
310
A
ALA
311
n
311
ALA
311
A
SER
312
n
312
SER
312
A
LYS
313
n
313
LYS
313
A
ASP
314
n
314
ASP
314
A
GLY
315
n
315
GLY
315
A
LYS
316
n
316
LYS
316
A
ARG
317
n
317
ARG
317
A
SER
318
n
318
SER
318
A
VAL
319
n
319
VAL
319
A
THR
320
n
320
THR
320
A
ALA
321
n
321
ALA
321
A
LEU
322
n
322
LEU
322
A
ALA
323
n
323
ALA
323
A
ASN
324
n
324
ASN
324
A
THR
325
n
325
THR
325
A
SER
326
n
326
SER
326
A
ASN
327
n
327
ASN
327
A
ASN
328
n
328
ASN
328
A
VAL
329
n
329
VAL
329
A
ASN
330
n
330
ASN
330
A
VAL
331
n
331
VAL
331
A
LEU
332
n
332
LEU
332
A
ASN
333
n
333
ASN
333
A
THR
334
n
334
THR
334
A
MET
335
n
335
MET
335
A
ALA
336
n
336
ALA
336
A
ARG
337
n
337
ARG
337
A
THR
338
n
338
THR
338
A
LEU
339
n
339
LEU
339
A
GLU
340
n
340
GLU
340
A
SER
341
n
341
SER
341
A
ALA
342
n
342
ALA
342
A
PHE
343
n
343
PHE
343
A
CYS
344
n
344
CYS
344
A
GLY
345
n
345
GLY
345
A
LYS
346
n
346
LYS
346
A
PRO
347
n
347
PRO
347
A
n
348
348
A
n
349
349
A
0.1083
0.1128
0.1098
0.1143
0.1341
0.14
5670
6231
5.0
5.0
112570
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
THR
35
A
O
THR
35
A
N
ASP
32
A
N
ASP
32
A
N
ASP
31
A
N
ASP
31
A
O
SER
318
A
O
SER
318
A
O
VAL
319
A
O
VAL
319
A
N
PHE
310
A
N
PHE
310
A
O
TYR
305
A
O
TYR
305
A
N
VAL
302
A
N
VAL
302
A
O
GLY
297
A
O
GLY
297
A
N
ARG
285
A
N
ARG
285
A
O
ARG
286
A
O
ARG
286
A
N
GLY
279
A
N
GLY
279
A
O
TYR
280
A
O
TYR
280
A
N
THR
272
A
N
THR
272
A
N
PHE
58
A
N
PHE
58
A
O
SER
242
A
O
SER
242
A
O
VAL
224
A
O
VAL
224
A
N
LEU
214
A
N
LEU
214
A
N
TYR
213
A
N
TYR
213
A
O
SER
326
A
O
SER
326
1
A
O
PRO
347
A
O
PRO
347
1
Y
1
A
ALA
1
A
ALA
1
1
Y
1
A
ASP
2
A
ASP
2
1
Y
1
A
THR
348
A
THR
348
1
Y
1
A
THR
349
A
THR
349
1
Y
1
5.07
0.50
120.30
125.37
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
29
29
29
A
A
A
N
1
5.49
0.50
120.30
125.79
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
29
29
29
B
B
B
N
1
5.77
0.90
118.30
124.07
A
A
A
CB
CG
OD2
ASP
ASP
ASP
31
31
31
A
A
A
N
1
4.13
0.60
121.00
125.13
A
A
A
CB
CG
CD2
TYR
TYR
TYR
137
137
137
A
A
A
N
1
-3.67
0.60
121.00
117.33
A
A
A
CB
CG
CD2
TYR
TYR
TYR
183
183
183
N
1
-4.82
0.70
120.80
115.98
A
A
A
CB
CG
CD2
PHE
PHE
PHE
188
188
188
N
1
6.08
0.90
118.30
124.38
A
A
A
CB
CG
OD1
ASP
ASP
ASP
202
202
202
N
1
-4.02
0.50
120.30
116.28
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
286
286
286
N
1
-3.03
0.50
120.30
117.27
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
287
287
287
N
1
5.47
0.50
120.30
125.77
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
337
337
337
N
1
A
ILE
187
-133.50
-60.65
1
A
GLN
235
56.59
-122.52
1
A
ASN
324
-91.99
49.76
ANISOTROPIC REFINEMENT REDUCED FREE R (NO CUTOFF) BY 0.029
0.14
0.1143
0.1143
0.1128
1.12
10.00
28853
6231
123545
123545
36144
5.0
94.2
RANDOM
1
FREE R
0.0
FOURIER SYNTHESIS
3PTE
ENGH AND HUBER
24
225.00
3081.77
1.12
10.00
445
3097
51
0
2601
0.015
0.029
0.000
0.0334
0.087
0.097
0.030
0.006
0.031
0.094
1.12
50.0
1MPL
701505
127013
0.0
2.0
0.041
1
27.2
5.5
96.6
0.208
1.12
1.16
3.0
1
2.0
75.1
refinement
SHELXL-97
data scaling
SCALEPACK
refinement
CNS
data reduction
DENZO
phasing
CNS
D-alanyl-D-alanine carboxypeptidase (E.C.3.4.16.4)
CRYSTAL STRUCTURE OF PHOSPHONATE-INHIBITED D-ALA-D-ALA PEPTIDASE REVEALS AN ANALOG OF A TETRAHEDRAL TRANSITION STATE
1
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
4
N
N
A
ASP
7
A
ASP
7
HELX_P
A
GLN
21
A
GLN
21
1
1
15
A
SER
62
A
SER
62
HELX_P
A
GLU
78
A
GLU
78
1
2
17
A
SER
86
A
SER
86
HELX_P
A
LEU
91
A
LEU
91
1
3
6
A
THR
101
A
THR
101
HELX_P
A
SER
107
A
SER
107
1
4
7
A
TYR
115
A
TYR
115
HELX_P
A
PHE
120
A
PHE
120
1
5
6
A
GLN
122
A
GLN
122
HELX_P
A
ARG
131
A
ARG
131
1
6
10
A
SER
136
A
SER
136
HELX_P
A
LYS
146
A
LYS
146
1
7
11
A
SER
160
A
SER
160
HELX_P
A
GLY
176
A
GLY
176
1
8
17
A
SER
178
A
SER
178
HELX_P
A
ILE
187
A
ILE
187
1
9
10
A
ALA
234
A
ALA
234
HELX_P
A
GLY
238
A
GLY
238
5
10
5
A
SER
243
A
SER
243
HELX_P
A
SER
256
A
SER
256
1
11
14
A
SER
261
A
SER
261
HELX_P
A
GLN
269
A
GLN
269
1
12
9
A
ASN
328
A
ASN
328
HELX_P
A
CYS
344
A
CYS
344
1
13
17
disulf
2.100
A
CYS
291
A
SG
CYS
291
1_555
A
CYS
344
A
SG
CYS
344
1_555
covale
1.593
one
A
A
RE1
400
B
P1
RE1
1_555
A
SER
62
A
OG
SER
62
1_555
HYDROLASE
TRANSITION STATE ANALOG, PEPTIDOGLYCAN, PENICILLIN BINDING PROTEIN, HYDROLASE
A
HIS
200
A
HIS
200
1
A
PRO
201
A
PRO
201
3.97
DAC_STRSR
UNP
1
32
P15555
ADLPAPDDTGLQAVLHTALSQGAPGAMVRVDDNGTIHQLSEGVADRATGRAITTTDRFRVGSVTKSFSAVVLLQLVDEGK
LDLDASVNTYLPGLLPDDRITVRQVMSHRSGLYDYTNDMFAQTVPGFESVRNKVFSYQDLITLSLKHGVTNAPGAAYSYS
NTNFVVAGMLIEKLTGHSVATEYQNRIFTPLNLTDTFYVHPDTVIPGTHANGYLTPDEAGGALVDSTEQTVSWAQSAGAV
ISSTQDLDTFFSALMSGQLMSAAQLAQMQQWTTVNSTQGYGLGLRRRDLSCGISVYGHTGTVQGYYTYAFASKDGKRSVT
ALANTSNNVNVLNTMARTLESAFCGKPTT
32
380
1MPL
1
349
P15555
A
1
1
349
8
2
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
A
THR
35
A
THR
35
A
GLY
42
A
GLY
42
A
GLY
25
A
GLY
25
A
ASP
32
A
ASP
32
A
ARG
317
A
ARG
317
A
ALA
323
A
ALA
323
A
TYR
305
A
TYR
305
A
ALA
311
A
ALA
311
A
SER
294
A
SER
294
A
VAL
302
A
VAL
302
A
ARG
285
A
ARG
285
A
ASP
288
A
ASP
288
A
GLN
278
A
GLN
278
A
TYR
280
A
TYR
280
A
THR
272
A
THR
272
A
ASN
275
A
ASN
275
A
PHE
58
A
PHE
58
A
ARG
59
A
ARG
59
A
ILE
241
A
ILE
241
A
SER
242
A
SER
242
A
VAL
224
A
VAL
224
A
ASP
225
A
ASP
225
A
TYR
213
A
TYR
213
A
LEU
214
A
LEU
214
A
THR
325
A
THR
325
A
SER
326
A
SER
326
BINDING SITE FOR RESIDUE RE1 A 400
Software
18
BINDING SITE FOR RESIDUE GOL A 500
Software
8
BINDING SITE FOR RESIDUE GOL A 501
Software
10
BINDING SITE FOR RESIDUE GOL A 502
Software
6
BINDING SITE FOR RESIDUE GOL A 503
Software
7
BINDING SITE FOR RESIDUE GOL A 504
Software
10
A
SER
62
A
SER
62
18
1_555
A
ARG
99
A
ARG
99
18
4_546
A
PHE
120
A
PHE
120
18
1_555
A
THR
123
A
THR
123
18
1_555
A
TYR
159
A
TYR
159
18
1_555
A
ASN
161
A
ASN
161
18
1_555
A
LEU
214
A
LEU
214
18
1_555
A
GLY
300
A
GLY
300
18
1_555
A
THR
301
A
THR
301
18
1_555
A
GLN
303
A
GLN
303
18
1_555
A
SER
326
A
SER
326
18
1_555
A
ASN
327
A
ASN
327
18
1_555
A
GOL
500
C
GOL
18
1_555
A
HOH
1013
H
HOH
18
1_555
A
HOH
1039
H
HOH
18
1_555
A
HOH
1074
H
HOH
18
4_546
A
HOH
1087
H
HOH
18
1_555
A
HOH
1224
H
HOH
18
1_555
A
ASP
97
A
ASP
97
8
4_546
A
PRO
153
A
PRO
153
8
4_546
A
TYR
306
A
TYR
306
8
1_555
A
ASN
327
A
ASN
327
8
1_555
A
VAL
329
A
VAL
329
8
1_555
A
RE1
400
B
RE1
8
1_555
A
HOH
1107
H
HOH
8
1_555
A
HOH
1237
H
HOH
8
1_555
A
SER
86
A
SER
86
10
4_546
A
THR
89
A
THR
89
10
4_546
A
ASP
98
A
ASP
98
10
4_546
A
ARG
99
A
ARG
99
10
4_546
A
ASP
114
A
ASP
114
10
1_555
A
ASN
117
A
ASN
117
10
1_555
A
TYR
159
A
TYR
159
10
1_555
A
HOH
1034
H
HOH
10
4_546
A
HOH
1064
H
HOH
10
1_555
A
HOH
1221
H
HOH
10
1_555
A
TYR
137
A
TYR
137
6
1_555
A
GLU
172
A
GLU
172
6
1_555
A
HIS
200
A
HIS
200
6
1_555
A
HOH
1025
H
HOH
6
1_555
A
HOH
1049
H
HOH
6
1_555
A
HOH
1352
H
HOH
6
1_555
A
ILE
205
A
ILE
205
7
1_555
A
GLY
207
A
GLY
207
7
1_555
A
HIS
209
A
HIS
209
7
1_555
A
LYS
346
A
LYS
346
7
3_645
A
HOH
1045
H
HOH
7
1_555
A
HOH
1223
H
HOH
7
1_555
A
HOH
1299
H
HOH
7
1_555
A
PRO
6
A
PRO
6
10
1_555
A
ASP
7
A
ASP
7
10
1_555
A
ASP
8
A
ASP
8
10
1_555
A
HIS
209
A
HIS
209
10
3_655
A
ASN
211
A
ASN
211
10
3_655
A
THR
227
A
THR
227
10
3_655
A
GLU
228
A
GLU
228
10
3_655
A
LYS
346
A
LYS
346
10
1_555
A
HOH
1109
H
HOH
10
1_555
A
HOH
1409
H
HOH
10
1_555
19
P 21 21 21