0.019802 0.000000 0.006396 0.000000 0.012516 0.000000 0.000000 0.000000 0.018901 0.00000 0.00000 0.00000 Krahn, J.M. Beard, W.A. Miller, H. Grollman, A.P. Wilson, S.H. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 2 90.00 107.90 90.00 50.500 79.900 55.600 C10 H14 N5 O8 P 363.221 n 8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE 8-OXO-7,8-DIHYDRO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE DNA linking C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C9 H16 N3 O13 P3 467.157 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE non-polymer C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O6 P 291.198 n 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer Na 1 22.990 SODIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N O N 2 N P N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 N C N 12 R C N 13 N N N 14 N C N 15 N N N 16 N C N 17 N C N 18 N O N 19 N N N 20 N C N 21 N N N 22 N N N 23 N C N 24 N O N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N N N 40 S C N 41 N C N 42 N O N 43 N C N 44 N O N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N H N 52 N N N 53 S C N 54 N C N 55 N O N 56 N C N 57 N C N 58 N C N 59 N N N 60 N C N 61 N N N 62 N N N 63 N O N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N N N 80 S C N 81 N C N 82 N O N 83 N C N 84 N C N 85 N O N 86 N N N 87 N O N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N N N 97 S C N 98 N C N 99 N O N 100 N C N 101 N C N 102 N O N 103 N O N 104 N O N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N N N 113 R C N 114 N C N 115 N O N 116 N C N 117 N S N 118 N O N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N O N 127 N P N 128 N O N 129 N O N 130 N O N 131 N C N 132 R C N 133 N O N 134 S C N 135 N O N 136 N C N 137 R C Y 138 N N Y 139 N C Y 140 N N Y 141 N C Y 142 N C N 143 N N Y 144 N N Y 145 N C Y 146 N N Y 147 N C N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N O N 163 N P N 164 N O N 165 N O N 166 N O N 167 N C N 168 R C N 169 N O N 170 S C N 171 N O N 172 N C N 173 R C N 174 N N N 175 N C N 176 N O N 177 N N N 178 N C N 179 N N N 180 N C N 181 N C N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N N N 197 N C N 198 N N N 199 N C N 200 N C N 201 N C N 202 N O N 203 N N N 204 R C N 205 N C N 206 S C N 207 R C N 208 N O N 209 N O N 210 N C N 211 N O N 212 R P N 213 N O N 214 N O N 215 N O N 216 S P N 217 N O N 218 N O N 219 N O N 220 N P N 221 N O N 222 N O N 223 N O N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N O N 241 N P N 242 N O N 243 N O N 244 N O N 245 N C N 246 R C N 247 N O N 248 S C N 249 N O N 250 N C N 251 R C Y 252 N N Y 253 N C Y 254 N N Y 255 N C N 256 N C N 257 N O N 258 N N N 259 N C N 260 N N N 261 N N Y 262 N C N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N N N 278 N C N 279 N N N 280 N C N 281 N C N 282 N C N 283 N O N 284 N N N 285 R C N 286 N C N 287 N C N 288 S C N 289 N O N 290 N C N 291 N O N 292 N P N 293 N O N 294 N O N 295 N O N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N O N 311 N P N 312 N O N 313 N O N 314 N O N 315 N C N 316 R C N 317 N O N 318 S C N 319 N O N 320 N C N 321 R C N 322 N N N 323 N C N 324 N O N 325 N N N 326 N C N 327 N O N 328 N C N 329 N C N 330 N C N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N N N 347 S C N 348 N C N 349 N O N 350 N C N 351 N C N 352 N C N 353 N O N 354 N N N 355 N O N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N N N 367 S C N 368 N C N 369 N O N 370 N C N 371 N C N 372 N C N 373 N O N 374 N O N 375 N O N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N N N 386 N C N 387 N C N 388 N O N 389 N O N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N N N 396 S C N 397 N C N 398 N O N 399 N C Y 400 N C Y 401 N N Y 402 N C Y 403 N C Y 404 N N N 405 N O N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N O N 417 N H N 418 N H N 419 N N N 420 S C N 421 N C N 422 N O N 423 S C N 424 N C N 425 N C N 426 N C N 427 N O N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N N N 442 S C N 443 N C N 444 N O N 445 N C N 446 N C N 447 N C N 448 N C N 449 N O N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N N N 464 S C N 465 N C N 466 N O N 467 N C N 468 N C N 469 N C N 470 N C N 471 N N N 472 N O N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 479 N H N 480 N H N 481 N H N 482 N H N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N N N 489 S C N 490 N C N 491 N O N 492 N C N 493 N C N 494 N S N 495 N C N 496 N O N 497 N H N 498 N H N 499 N H N 500 N H N 501 N H N 502 N H N 503 N H N 504 N H N 505 N H N 506 N H N 507 N H N 508 N MG N 509 N NA N 510 N N N 511 S C N 512 N C N 513 N O N 514 N C Y 515 N C Y 516 N C Y 517 N C Y 518 N C Y 519 N C Y 520 N C N 521 N O N 522 N H N 523 N H N 524 N H N 525 N H N 526 N H N 527 N H N 528 N H N 529 N H N 530 N H N 531 N H N 532 N H N 533 N N N 534 S C N 535 N C N 536 N O N 537 N C N 538 N C N 539 N C N 540 N O N 541 N H N 542 N H N 543 N H N 544 N H N 545 N H N 546 N H N 547 N H N 548 N H N 549 N H N 550 N N N 551 S C N 552 N C N 553 N O N 554 N C N 555 N O N 556 N O N 557 N H N 558 N H N 559 N H N 560 N H N 561 N H N 562 N H N 563 N H N 564 N N N 565 S C N 566 N C N 567 N O N 568 R C N 569 N O N 570 N C N 571 N O N 572 N H N 573 N H N 574 N H N 575 N H N 576 N H N 577 N H N 578 N H N 579 N H N 580 N H N 581 N N N 582 S C N 583 N C N 584 N O N 585 N C Y 586 N C Y 587 N C Y 588 N C Y 589 N N Y 590 N C Y 591 N C Y 592 N C Y 593 N C Y 594 N C N 595 N O N 596 N H N 597 N H N 598 N H N 599 N H N 600 N H N 601 N H N 602 N H N 603 N H N 604 N H N 605 N H N 606 N H N 607 N H N 608 N N N 609 S C N 610 N C N 611 N O N 612 N C Y 613 N C Y 614 N C Y 615 N C Y 616 N C Y 617 N C Y 618 N C N 619 N O N 620 N O N 621 N H N 622 N H N 623 N H N 624 N H N 625 N H N 626 N H N 627 N H N 628 N H N 629 N H N 630 N H N 631 N H N 632 N N N 633 S C N 634 N C N 635 N O N 636 N C N 637 N C N 638 N C N 639 N O N 640 N H N 641 N H N 642 N H N 643 N H N 644 N H N 645 N H N 646 N H N 647 N H N 648 N H N 649 N H N 650 N H N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N doub N 28 N sing N 29 N sing N 30 N sing N 31 N doub N 32 N doub N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N doub N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N doub N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N doub N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N doub N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N doub N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N doub N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N doub N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N doub N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing Y 146 N sing Y 147 N sing Y 148 N doub N 149 N sing Y 150 N sing Y 151 N sing Y 152 N doub N 153 N sing Y 154 N doub N 155 N sing N 156 N sing Y 157 N sing Y 158 N doub N 159 N sing Y 160 N sing N 161 N sing N 162 N sing N 163 N doub N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N doub N 187 N sing N 188 N doub N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N doub N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N doub N 202 N sing N 203 N sing N 204 N doub N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N doub N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N doub N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N doub N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing Y 264 N sing Y 265 N sing Y 266 N doub N 267 N sing Y 268 N sing N 269 N sing Y 270 N doub N 271 N doub N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N doub N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N doub N 285 N doub N 286 N sing N 287 N sing N 288 N doub N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N doub N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N doub N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N doub N 340 N sing N 341 N sing N 342 N sing N 343 N doub N 344 N sing N 345 N sing N 346 N doub N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N doub N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N doub N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N doub N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N doub N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N doub N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N doub N 404 N sing N 405 N sing N 406 N sing N 407 N sing Y 408 N sing Y 409 N doub Y 410 N doub N 411 N sing Y 412 N sing N 413 N sing Y 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N doub N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N doub N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N doub N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N sing N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N sing N 490 N sing N 491 N sing N 492 N doub N 493 N sing N 494 N sing N 495 N sing N 496 N sing N 497 N sing N 498 N sing N 499 N sing N 500 N sing N 501 N sing N 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N doub N 512 N sing N 513 N sing N 514 N sing N 515 N sing Y 516 N doub Y 517 N sing Y 518 N sing N 519 N sing Y 520 N doub N 521 N sing Y 522 N doub N 523 N sing Y 524 N sing N 525 N sing N 526 N sing N 527 N sing N 528 N sing N 529 N sing N 530 N sing N 531 N sing N 532 N sing N 533 N sing N 534 N doub N 535 N sing N 536 N sing N 537 N sing N 538 N sing N 539 N sing N 540 N sing N 541 N sing N 542 N sing N 543 N sing N 544 N sing N 545 N sing N 546 N sing N 547 N sing N 548 N sing N 549 N sing N 550 N sing N 551 N doub N 552 N sing N 553 N sing N 554 N sing N 555 N sing N 556 N sing N 557 N sing N 558 N sing N 559 N sing N 560 N sing N 561 N sing N 562 N sing N 563 N sing N 564 N doub N 565 N sing N 566 N sing N 567 N sing N 568 N sing N 569 N sing N 570 N sing N 571 N sing N 572 N sing N 573 N sing N 574 N sing N 575 N sing N 576 N sing N 577 N sing N 578 N sing N 579 N sing N 580 N doub N 581 N sing N 582 N sing N 583 N sing N 584 N sing Y 585 N doub Y 586 N sing Y 587 N sing N 588 N sing Y 589 N doub Y 590 N sing Y 591 N sing N 592 N sing Y 593 N sing Y 594 N doub N 595 N sing Y 596 N doub N 597 N sing Y 598 N sing N 599 N sing N 600 N sing N 601 N sing N 602 N sing N 603 N sing N 604 N sing N 605 N sing N 606 N sing N 607 N sing N 608 N doub N 609 N sing N 610 N sing N 611 N sing N 612 N sing Y 613 N doub Y 614 N sing Y 615 N sing N 616 N sing Y 617 N doub N 618 N sing Y 619 N doub N 620 N sing Y 621 N sing N 622 N sing N 623 N sing N 624 N sing N 625 N sing N 626 N sing N 627 N sing N 628 N sing N 629 N sing N 630 N sing N 631 N sing N 632 N doub N 633 N sing N 634 N sing N 635 N sing N 636 N sing N 637 N sing N 638 N sing N 639 N sing N 640 N sing N 641 N sing N 642 N sing N 643 N sing UK Structure STRUE6 2005 0969-2126 11 121 127 10.1016/S0969-2126(02)00930-9 12517346 Structure of DNA Polymerase beta with the Mutagenic DNA Lesion 8-oxodeoxyguanine Reveals Structural Insights into its Coding Potential 2003 10.2210/pdb1mq3/pdb pdb_00001mq3 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 200.0 1 IMAGE PLATE RIGAKU RAXIS IV SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU300 4885.157 5'-D(*CP*CP*GP*AP*CP*(8OG)P*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3' 1 syn polymer 3045.005 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3' 1 syn polymer 1536.035 5'-D(P*GP*TP*CP*GP*G)-3' 1 syn polymer 38241.672 DNA POLYMERASE BETA 2.7.7.7 1 man polymer 24.305 MAGNESIUM ION 1 syn non-polymer 22.990 SODIUM ION 2 syn non-polymer 467.157 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE 1 syn non-polymer 18.015 water 78 nat water no yes (DC)(DC)(DG)(DA)(DC)(8OG)(DG)(DC)(DG)(DC)(DA)(DT)(DC)(DA)(DG)(DC) CCGACGGCGCATCAGC T polydeoxyribonucleotide no yes (DG)(DC)(DT)(DG)(DA)(DT)(DG)(DC)(DG)(DOC) GCTGATGCGC P polydeoxyribonucleotide no no (DG)(DT)(DC)(DG)(DG) GTCGG D polydeoxyribonucleotide no no MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia sample 9606 Homo sapiens 562 Escherichia coli 1 2.22 44.55 7.5 14% PEG 3350, 350 mM sodium acetate and 50 mM imidazole at 18 degrees (C), pH 7.5, temperature 291.0K 291.0 PEG 3350 1 sodium acetate 1 imidazole 1 -8.110 1 T 1 D 5 8.691 T_DC1:DG5_D 1 1.321 1.742 0.049 -0.120 -15.153 1 19 T 2 D 4 0.426 T_DC2:DG4_D 2 -12.437 -0.549 0.662 0.131 7.300 1 19 T 3 D 3 6.347 T_DG3:DC3_D 3 -16.796 -1.240 0.286 -0.268 2.277 1 20 T 4 D 2 -7.010 T_DA4:DT2_D 4 -21.573 0.370 0.290 -0.345 8.225 1 19 T 5 D 1 -0.146 T_DC5:DG1_D 5 4.495 0.851 -0.116 -0.142 -12.784 1 19 T 7 P 10 -8.855 T_DG7:DOC10_P 6 5.282 0.890 -0.992 -0.326 26.235 1 19 T 8 P 9 5.251 T_DC8:DG9_P 7 -2.061 0.246 -1.462 -0.158 -5.910 1 19 T 9 P 8 2.500 T_DG9:DC8_P 8 -6.558 -0.045 -1.175 0.174 22.291 1 19 T 10 P 7 8.434 T_DC10:DG7_P 9 -14.641 0.554 -1.005 0.061 13.775 1 20 T 11 P 6 1.139 T_DA11:DT6_P 10 -16.372 -0.108 0.290 -0.183 0.848 1 20 T 12 P 5 -0.216 T_DT12:DA5_P 11 1.141 -0.151 0.482 0.018 7.790 1 19 T 13 P 4 -3.290 T_DC13:DG4_P 12 0.875 -0.252 -0.375 -0.106 8.484 1 20 T 14 P 3 4.387 T_DA14:DT3_P 13 -0.512 0.311 0.330 0.113 -0.343 1 T 15 P 2 2.279 T_DG15:DC2_P 14 1.286 -0.032 0.911 0.364 0.659 1 19 T 16 P 1 4.661 T_DC16:DG1_P 15 1.746 1.356 0.556 -0.390 3.649 34.703 T T 1 2 -6.601 D D 5 4 3.681 -3.898 -1.051 1.366 TT_DC1DC2:DG4DG5_DD 1 -7.662 12.973 33.653 2.971 0.425 2.915 33.669 T T 2 3 -6.198 D D 4 3 3.018 -3.558 0.506 1.222 TT_DC2DG3:DC3DG4_DD 2 7.143 -12.444 32.737 2.643 0.198 3.477 45.593 T T 3 4 -1.837 D D 3 2 3.440 -1.421 -1.010 1.662 TT_DG3DA4:DT2DC3_DD 3 -5.106 6.603 45.300 2.277 0.828 3.043 35.057 T T 4 5 12.040 D D 2 1 3.025 7.189 0.883 -0.006 TT_DA4DC5:DG1DT2_DD 4 4.035 -6.758 34.103 -1.025 -0.896 2.490 25.652 T T 7 8 -4.343 P P 10 9 2.381 -1.918 0.865 -0.066 TT_DG7DC8:DG9DOC10_PP 5 4.338 -9.824 25.217 0.257 -1.028 4.052 40.994 T T 8 9 27.206 P P 9 8 4.238 18.406 -1.207 0.361 TT_DC8DG9:DC8DG9_PP 6 -3.108 4.594 36.661 -2.188 1.267 2.713 30.184 T T 9 10 0.541 P P 8 7 2.713 0.282 -0.371 0.282 TT_DG9DC10:DG7DC8_PP 7 0.195 -0.374 30.182 0.495 0.745 3.102 36.998 T T 10 11 13.522 P P 7 6 3.326 8.462 0.240 -0.195 TT_DC10DA11:DT6DG7_PP 8 -6.856 10.956 35.413 -1.451 -1.306 3.500 32.177 T T 11 12 5.864 P P 6 5 3.633 3.243 0.206 -0.993 TT_DA11DT12:DA5DT6_PP 9 -1.961 3.546 31.959 -2.425 -0.755 2.964 37.277 T T 12 13 -1.941 P P 5 4 2.973 -1.226 0.371 0.032 TT_DT12DC13:DG4DA5_PP 10 10.087 -15.968 35.913 0.200 0.657 3.063 37.945 T T 13 14 16.967 P P 4 3 3.301 10.885 0.079 -0.371 TT_DC13DA14:DT3DG4_PP 11 -1.618 2.521 36.371 -1.955 -0.327 3.198 32.196 T T 14 15 10.726 P P 3 2 3.368 5.895 0.093 -0.379 TT_DA14DG15:DC2DT3_PP 12 -4.752 8.646 31.316 -1.754 -1.031 3.058 40.939 T T 15 16 7.391 P P 2 1 3.145 5.154 0.179 -0.571 TT_DG15DC16:DG1DC2_PP 13 2.236 -3.206 40.568 -1.354 -0.023 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn struct_conn_type struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations Refinement description 1 0 2003-01-28 1 1 2008-04-28 1 2 2011-07-13 1 3 2024-02-14 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.conn_type_id _struct_conn.id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn_type.id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id 1bpx is Human DNA Polymerase Beta Complexed With Gapped DNA 1bpy is Human DNA Polymerase Beta Complexed With Gapped DNA and Ddctp 1MQ2 IS Human DNA Polymerase Beta Complexed With Gapped DNA Containing an 8-oxo-7,8-dihydro-Guanine and dAMP RCSB Y RCSB 2002-09-13 REL MG MAGNESIUM ION NA SODIUM ION DCP 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE HOH water 1BPY PDB experimental model MG 339 5 MG MG 339 A NA 341 6 NA NA 341 A NA 342 6 NA NA 342 A DCP 338 7 DCP DCP 338 A HOH 27 8 HOH HOH 27 T HOH 39 8 HOH HOH 39 T HOH 53 8 HOH HOH 53 T HOH 63 8 HOH HOH 63 T HOH 344 8 HOH HOH 344 P HOH 8 8 HOH HOH 345 P HOH 10 8 HOH HOH 346 P HOH 28 8 HOH HOH 347 P HOH 34 8 HOH HOH 34 D HOH 346 8 HOH HOH 346 D HOH 345 8 HOH HOH 345 A HOH 343 8 HOH HOH 346 A HOH 347 8 HOH HOH 347 A HOH 1 8 HOH HOH 348 A HOH 2 8 HOH HOH 349 A HOH 3 8 HOH HOH 350 A HOH 4 8 HOH HOH 351 A HOH 5 8 HOH HOH 352 A HOH 6 8 HOH HOH 353 A HOH 7 8 HOH HOH 354 A HOH 9 8 HOH HOH 355 A HOH 11 8 HOH HOH 356 A HOH 12 8 HOH HOH 357 A HOH 13 8 HOH HOH 358 A HOH 14 8 HOH HOH 359 A HOH 15 8 HOH HOH 360 A HOH 16 8 HOH HOH 361 A HOH 17 8 HOH HOH 362 A HOH 18 8 HOH HOH 363 A HOH 19 8 HOH HOH 364 A HOH 20 8 HOH HOH 365 A HOH 21 8 HOH HOH 366 A HOH 22 8 HOH HOH 367 A HOH 23 8 HOH HOH 368 A HOH 24 8 HOH HOH 369 A HOH 25 8 HOH HOH 370 A HOH 26 8 HOH HOH 371 A HOH 29 8 HOH HOH 372 A HOH 30 8 HOH HOH 373 A HOH 31 8 HOH HOH 374 A HOH 32 8 HOH HOH 375 A HOH 33 8 HOH HOH 376 A HOH 35 8 HOH HOH 377 A HOH 36 8 HOH HOH 378 A HOH 37 8 HOH HOH 379 A HOH 38 8 HOH HOH 380 A HOH 40 8 HOH HOH 381 A HOH 41 8 HOH HOH 382 A HOH 42 8 HOH HOH 383 A HOH 43 8 HOH HOH 384 A HOH 44 8 HOH HOH 385 A HOH 45 8 HOH HOH 386 A HOH 46 8 HOH HOH 387 A HOH 47 8 HOH HOH 388 A HOH 48 8 HOH HOH 389 A HOH 49 8 HOH HOH 390 A HOH 50 8 HOH HOH 391 A HOH 51 8 HOH HOH 392 A HOH 52 8 HOH HOH 393 A HOH 54 8 HOH HOH 394 A HOH 55 8 HOH HOH 395 A HOH 56 8 HOH HOH 396 A HOH 57 8 HOH HOH 397 A HOH 58 8 HOH HOH 398 A HOH 59 8 HOH HOH 399 A HOH 60 8 HOH HOH 400 A HOH 61 8 HOH HOH 401 A HOH 62 8 HOH HOH 402 A HOH 64 8 HOH HOH 403 A HOH 65 8 HOH HOH 404 A HOH 66 8 HOH HOH 405 A HOH 67 8 HOH HOH 406 A HOH 68 8 HOH HOH 407 A HOH 69 8 HOH HOH 408 A HOH 70 8 HOH HOH 409 A HOH 71 8 HOH HOH 410 A HOH 72 8 HOH HOH 411 A HOH 73 8 HOH HOH 412 A C 1 n 1 DC 1 T C 2 n 2 DC 2 T G 3 n 3 DG 3 T A 4 n 4 DA 4 T C 5 n 5 DC 5 T 8OG 6 n 6 8OG 6 T G 7 n 7 DG 7 T C 8 n 8 DC 8 T G 9 n 9 DG 9 T C 10 n 10 DC 10 T A 11 n 11 DA 11 T T 12 n 12 DT 12 T C 13 n 13 DC 13 T A 14 n 14 DA 14 T G 15 n 15 DG 15 T C 16 n 16 DC 16 T G 1 n 1 DG 1 P C 2 n 2 DC 2 P T 3 n 3 DT 3 P G 4 n 4 DG 4 P A 5 n 5 DA 5 P T 6 n 6 DT 6 P G 7 n 7 DG 7 P C 8 n 8 DC 8 P G 9 n 9 DG 9 P DOC 10 n 10 DOC 10 P G 1 n 1 DG 1 D T 2 n 2 DT 2 D C 3 n 3 DC 3 D G 4 n 4 DG 4 D G 5 n 5 DG 5 D n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A n 6 6 A n 7 7 A n 8 8 A n 9 9 A THR 10 n 10 THR 10 A LEU 11 n 11 LEU 11 A ASN 12 n 12 ASN 12 A GLY 13 n 13 GLY 13 A GLY 14 n 14 GLY 14 A ILE 15 n 15 ILE 15 A THR 16 n 16 THR 16 A ASP 17 n 17 ASP 17 A MET 18 n 18 MET 18 A LEU 19 n 19 LEU 19 A THR 20 n 20 THR 20 A GLU 21 n 21 GLU 21 A LEU 22 n 22 LEU 22 A ALA 23 n 23 ALA 23 A ASN 24 n 24 ASN 24 A PHE 25 n 25 PHE 25 A GLU 26 n 26 GLU 26 A LYS 27 n 27 LYS 27 A ASN 28 n 28 ASN 28 A VAL 29 n 29 VAL 29 A SER 30 n 30 SER 30 A GLN 31 n 31 GLN 31 A ALA 32 n 32 ALA 32 A ILE 33 n 33 ILE 33 A HIS 34 n 34 HIS 34 A LYS 35 n 35 LYS 35 A TYR 36 n 36 TYR 36 A ASN 37 n 37 ASN 37 A ALA 38 n 38 ALA 38 A TYR 39 n 39 TYR 39 A ARG 40 n 40 ARG 40 A LYS 41 n 41 LYS 41 A ALA 42 n 42 ALA 42 A ALA 43 n 43 ALA 43 A SER 44 n 44 SER 44 A VAL 45 n 45 VAL 45 A ILE 46 n 46 ILE 46 A ALA 47 n 47 ALA 47 A LYS 48 n 48 LYS 48 A TYR 49 n 49 TYR 49 A PRO 50 n 50 PRO 50 A HIS 51 n 51 HIS 51 A LYS 52 n 52 LYS 52 A ILE 53 n 53 ILE 53 A LYS 54 n 54 LYS 54 A SER 55 n 55 SER 55 A GLY 56 n 56 GLY 56 A ALA 57 n 57 ALA 57 A GLU 58 n 58 GLU 58 A ALA 59 n 59 ALA 59 A LYS 60 n 60 LYS 60 A LYS 61 n 61 LYS 61 A LEU 62 n 62 LEU 62 A PRO 63 n 63 PRO 63 A GLY 64 n 64 GLY 64 A VAL 65 n 65 VAL 65 A GLY 66 n 66 GLY 66 A THR 67 n 67 THR 67 A LYS 68 n 68 LYS 68 A ILE 69 n 69 ILE 69 A ALA 70 n 70 ALA 70 A GLU 71 n 71 GLU 71 A LYS 72 n 72 LYS 72 A ILE 73 n 73 ILE 73 A ASP 74 n 74 ASP 74 A GLU 75 n 75 GLU 75 A PHE 76 n 76 PHE 76 A LEU 77 n 77 LEU 77 A ALA 78 n 78 ALA 78 A THR 79 n 79 THR 79 A GLY 80 n 80 GLY 80 A LYS 81 n 81 LYS 81 A LEU 82 n 82 LEU 82 A ARG 83 n 83 ARG 83 A LYS 84 n 84 LYS 84 A LEU 85 n 85 LEU 85 A GLU 86 n 86 GLU 86 A LYS 87 n 87 LYS 87 A ILE 88 n 88 ILE 88 A ARG 89 n 89 ARG 89 A GLN 90 n 90 GLN 90 A ASP 91 n 91 ASP 91 A ASP 92 n 92 ASP 92 A THR 93 n 93 THR 93 A SER 94 n 94 SER 94 A SER 95 n 95 SER 95 A SER 96 n 96 SER 96 A ILE 97 n 97 ILE 97 A ASN 98 n 98 ASN 98 A PHE 99 n 99 PHE 99 A LEU 100 n 100 LEU 100 A THR 101 n 101 THR 101 A ARG 102 n 102 ARG 102 A VAL 103 n 103 VAL 103 A SER 104 n 104 SER 104 A GLY 105 n 105 GLY 105 A ILE 106 n 106 ILE 106 A GLY 107 n 107 GLY 107 A PRO 108 n 108 PRO 108 A SER 109 n 109 SER 109 A ALA 110 n 110 ALA 110 A ALA 111 n 111 ALA 111 A ARG 112 n 112 ARG 112 A LYS 113 n 113 LYS 113 A PHE 114 n 114 PHE 114 A VAL 115 n 115 VAL 115 A ASP 116 n 116 ASP 116 A GLU 117 n 117 GLU 117 A GLY 118 n 118 GLY 118 A ILE 119 n 119 ILE 119 A LYS 120 n 120 LYS 120 A THR 121 n 121 THR 121 A LEU 122 n 122 LEU 122 A GLU 123 n 123 GLU 123 A ASP 124 n 124 ASP 124 A LEU 125 n 125 LEU 125 A ARG 126 n 126 ARG 126 A LYS 127 n 127 LYS 127 A ASN 128 n 128 ASN 128 A GLU 129 n 129 GLU 129 A ASP 130 n 130 ASP 130 A LYS 131 n 131 LYS 131 A LEU 132 n 132 LEU 132 A ASN 133 n 133 ASN 133 A HIS 134 n 134 HIS 134 A HIS 135 n 135 HIS 135 A GLN 136 n 136 GLN 136 A ARG 137 n 137 ARG 137 A ILE 138 n 138 ILE 138 A GLY 139 n 139 GLY 139 A LEU 140 n 140 LEU 140 A LYS 141 n 141 LYS 141 A TYR 142 n 142 TYR 142 A PHE 143 n 143 PHE 143 A GLY 144 n 144 GLY 144 A ASP 145 n 145 ASP 145 A PHE 146 n 146 PHE 146 A GLU 147 n 147 GLU 147 A LYS 148 n 148 LYS 148 A ARG 149 n 149 ARG 149 A ILE 150 n 150 ILE 150 A PRO 151 n 151 PRO 151 A ARG 152 n 152 ARG 152 A GLU 153 n 153 GLU 153 A GLU 154 n 154 GLU 154 A MET 155 n 155 MET 155 A LEU 156 n 156 LEU 156 A GLN 157 n 157 GLN 157 A MET 158 n 158 MET 158 A GLN 159 n 159 GLN 159 A ASP 160 n 160 ASP 160 A ILE 161 n 161 ILE 161 A VAL 162 n 162 VAL 162 A LEU 163 n 163 LEU 163 A ASN 164 n 164 ASN 164 A GLU 165 n 165 GLU 165 A VAL 166 n 166 VAL 166 A LYS 167 n 167 LYS 167 A LYS 168 n 168 LYS 168 A VAL 169 n 169 VAL 169 A ASP 170 n 170 ASP 170 A SER 171 n 171 SER 171 A GLU 172 n 172 GLU 172 A TYR 173 n 173 TYR 173 A ILE 174 n 174 ILE 174 A ALA 175 n 175 ALA 175 A THR 176 n 176 THR 176 A VAL 177 n 177 VAL 177 A CYS 178 n 178 CYS 178 A GLY 179 n 179 GLY 179 A SER 180 n 180 SER 180 A PHE 181 n 181 PHE 181 A ARG 182 n 182 ARG 182 A ARG 183 n 183 ARG 183 A GLY 184 n 184 GLY 184 A ALA 185 n 185 ALA 185 A GLU 186 n 186 GLU 186 A SER 187 n 187 SER 187 A SER 188 n 188 SER 188 A GLY 189 n 189 GLY 189 A ASP 190 n 190 ASP 190 A MET 191 n 191 MET 191 A ASP 192 n 192 ASP 192 A VAL 193 n 193 VAL 193 A LEU 194 n 194 LEU 194 A LEU 195 n 195 LEU 195 A THR 196 n 196 THR 196 A HIS 197 n 197 HIS 197 A PRO 198 n 198 PRO 198 A SER 199 n 199 SER 199 A PHE 200 n 200 PHE 200 A THR 201 n 201 THR 201 A SER 202 n 202 SER 202 A GLU 203 n 203 GLU 203 A SER 204 n 204 SER 204 A THR 205 n 205 THR 205 A LYS 206 n 206 LYS 206 A GLN 207 n 207 GLN 207 A PRO 208 n 208 PRO 208 A LYS 209 n 209 LYS 209 A LEU 210 n 210 LEU 210 A LEU 211 n 211 LEU 211 A HIS 212 n 212 HIS 212 A GLN 213 n 213 GLN 213 A VAL 214 n 214 VAL 214 A VAL 215 n 215 VAL 215 A GLU 216 n 216 GLU 216 A GLN 217 n 217 GLN 217 A LEU 218 n 218 LEU 218 A GLN 219 n 219 GLN 219 A LYS 220 n 220 LYS 220 A VAL 221 n 221 VAL 221 A HIS 222 n 222 HIS 222 A PHE 223 n 223 PHE 223 A ILE 224 n 224 ILE 224 A THR 225 n 225 THR 225 A ASP 226 n 226 ASP 226 A THR 227 n 227 THR 227 A LEU 228 n 228 LEU 228 A SER 229 n 229 SER 229 A LYS 230 n 230 LYS 230 A GLY 231 n 231 GLY 231 A GLU 232 n 232 GLU 232 A THR 233 n 233 THR 233 A LYS 234 n 234 LYS 234 A PHE 235 n 235 PHE 235 A MET 236 n 236 MET 236 A GLY 237 n 237 GLY 237 A VAL 238 n 238 VAL 238 A CYS 239 n 239 CYS 239 A GLN 240 n 240 GLN 240 A LEU 241 n 241 LEU 241 A PRO 242 n 242 PRO 242 A SER 243 n 243 SER 243 A LYS 244 n 244 LYS 244 A ASN 245 n 245 ASN 245 A ASP 246 n 246 ASP 246 A GLU 247 n 247 GLU 247 A LYS 248 n 248 LYS 248 A GLU 249 n 249 GLU 249 A TYR 250 n 250 TYR 250 A PRO 251 n 251 PRO 251 A HIS 252 n 252 HIS 252 A ARG 253 n 253 ARG 253 A ARG 254 n 254 ARG 254 A ILE 255 n 255 ILE 255 A ASP 256 n 256 ASP 256 A ILE 257 n 257 ILE 257 A ARG 258 n 258 ARG 258 A LEU 259 n 259 LEU 259 A ILE 260 n 260 ILE 260 A PRO 261 n 261 PRO 261 A LYS 262 n 262 LYS 262 A ASP 263 n 263 ASP 263 A GLN 264 n 264 GLN 264 A TYR 265 n 265 TYR 265 A TYR 266 n 266 TYR 266 A CYS 267 n 267 CYS 267 A GLY 268 n 268 GLY 268 A VAL 269 n 269 VAL 269 A LEU 270 n 270 LEU 270 A TYR 271 n 271 TYR 271 A PHE 272 n 272 PHE 272 A THR 273 n 273 THR 273 A GLY 274 n 274 GLY 274 A SER 275 n 275 SER 275 A ASP 276 n 276 ASP 276 A ILE 277 n 277 ILE 277 A PHE 278 n 278 PHE 278 A ASN 279 n 279 ASN 279 A LYS 280 n 280 LYS 280 A ASN 281 n 281 ASN 281 A MET 282 n 282 MET 282 A ARG 283 n 283 ARG 283 A ALA 284 n 284 ALA 284 A HIS 285 n 285 HIS 285 A ALA 286 n 286 ALA 286 A LEU 287 n 287 LEU 287 A GLU 288 n 288 GLU 288 A LYS 289 n 289 LYS 289 A GLY 290 n 290 GLY 290 A PHE 291 n 291 PHE 291 A THR 292 n 292 THR 292 A ILE 293 n 293 ILE 293 A ASN 294 n 294 ASN 294 A GLU 295 n 295 GLU 295 A TYR 296 n 296 TYR 296 A THR 297 n 297 THR 297 A ILE 298 n 298 ILE 298 A ARG 299 n 299 ARG 299 A PRO 300 n 300 PRO 300 A LEU 301 n 301 LEU 301 A GLY 302 n 302 GLY 302 A VAL 303 n 303 VAL 303 A THR 304 n 304 THR 304 A GLY 305 n 305 GLY 305 A VAL 306 n 306 VAL 306 A ALA 307 n 307 ALA 307 A GLY 308 n 308 GLY 308 A GLU 309 n 309 GLU 309 A PRO 310 n 310 PRO 310 A LEU 311 n 311 LEU 311 A PRO 312 n 312 PRO 312 A VAL 313 n 313 VAL 313 A ASP 314 n 314 ASP 314 A SER 315 n 315 SER 315 A GLU 316 n 316 GLU 316 A LYS 317 n 317 LYS 317 A ASP 318 n 318 ASP 318 A ILE 319 n 319 ILE 319 A PHE 320 n 320 PHE 320 A ASP 321 n 321 ASP 321 A TYR 322 n 322 TYR 322 A ILE 323 n 323 ILE 323 A GLN 324 n 324 GLN 324 A TRP 325 n 325 TRP 325 A LYS 326 n 326 LYS 326 A TYR 327 n 327 TYR 327 A ARG 328 n 328 ARG 328 A GLU 329 n 329 GLU 329 A PRO 330 n 330 PRO 330 A LYS 331 n 331 LYS 331 A ASP 332 n 332 ASP 332 A ARG 333 n 333 ARG 333 A SER 334 n 334 SER 334 A GLU 335 n 335 GLU 335 A author_defined_assembly 4 tetrameric P DG 9 B OP1 DG 9 1_555 A NA 341 F NA NA 1_555 P HOH 344 J O HOH 1_555 84.4 P DG 9 B OP1 DG 9 1_555 A NA 341 F NA NA 1_555 A THR 101 D O THR 101 1_555 166.3 P HOH 344 J O HOH 1_555 A NA 341 F NA NA 1_555 A THR 101 D O THR 101 1_555 82.0 P DG 9 B OP1 DG 9 1_555 A NA 341 F NA NA 1_555 A VAL 103 D O VAL 103 1_555 86.4 P HOH 344 J O HOH 1_555 A NA 341 F NA NA 1_555 A VAL 103 D O VAL 103 1_555 163.6 A THR 101 D O THR 101 1_555 A NA 341 F NA NA 1_555 A VAL 103 D O VAL 103 1_555 107.3 P DG 9 B OP1 DG 9 1_555 A NA 341 F NA NA 1_555 A ILE 106 D O ILE 106 1_555 84.7 P HOH 344 J O HOH 1_555 A NA 341 F NA NA 1_555 A ILE 106 D O ILE 106 1_555 77.6 A THR 101 D O THR 101 1_555 A NA 341 F NA NA 1_555 A ILE 106 D O ILE 106 1_555 94.2 A VAL 103 D O VAL 103 1_555 A NA 341 F NA NA 1_555 A ILE 106 D O ILE 106 1_555 88.1 P DG 9 B OP1 DG 9 1_555 A NA 341 F NA NA 1_555 A HOH 345 L O HOH 1_555 99.2 P HOH 344 J O HOH 1_555 A NA 341 F NA NA 1_555 A HOH 345 L O HOH 1_555 104.1 A THR 101 D O THR 101 1_555 A NA 341 F NA NA 1_555 A HOH 345 L O HOH 1_555 82.5 A VAL 103 D O VAL 103 1_555 A NA 341 F NA NA 1_555 A HOH 345 L O HOH 1_555 90.7 A ILE 106 D O ILE 106 1_555 A NA 341 F NA NA 1_555 A HOH 345 L O HOH 1_555 175.9 D DC 3 C OP1 DC 3 1_555 A NA 342 G NA NA 1_555 D HOH 346 K O HOH 1_555 85.6 D DC 3 C OP1 DC 3 1_555 A NA 342 G NA NA 1_555 A LYS 60 D O LYS 60 1_555 174.9 D HOH 346 K O HOH 1_555 A NA 342 G NA NA 1_555 A LYS 60 D O LYS 60 1_555 94.8 D DC 3 C OP1 DC 3 1_555 A NA 342 G NA NA 1_555 A LEU 62 D O LEU 62 1_555 98.9 D HOH 346 K O HOH 1_555 A NA 342 G NA NA 1_555 A LEU 62 D O LEU 62 1_555 170.6 A LYS 60 D O LYS 60 1_555 A NA 342 G NA NA 1_555 A LEU 62 D O LEU 62 1_555 81.4 D DC 3 C OP1 DC 3 1_555 A NA 342 G NA NA 1_555 A VAL 65 D O VAL 65 1_555 99.9 D HOH 346 K O HOH 1_555 A NA 342 G NA NA 1_555 A VAL 65 D O VAL 65 1_555 91.2 A LYS 60 D O LYS 60 1_555 A NA 342 G NA NA 1_555 A VAL 65 D O VAL 65 1_555 75.0 A LEU 62 D O LEU 62 1_555 A NA 342 G NA NA 1_555 A VAL 65 D O VAL 65 1_555 96.1 D DC 3 C OP1 DC 3 1_555 A NA 342 G NA NA 1_555 A HOH 347 L O HOH 1_555 91.1 D HOH 346 K O HOH 1_555 A NA 342 G NA NA 1_555 A HOH 347 L O HOH 1_555 92.8 A LYS 60 D O LYS 60 1_555 A NA 342 G NA NA 1_555 A HOH 347 L O HOH 1_555 94.0 A LEU 62 D O LEU 62 1_555 A NA 342 G NA NA 1_555 A HOH 347 L O HOH 1_555 78.9 A VAL 65 D O VAL 65 1_555 A NA 342 G NA NA 1_555 A HOH 347 L O HOH 1_555 168.5 A ASP 190 D OD1 ASP 190 1_555 A MG 339 E MG MG 1_555 A ASP 192 D OD2 ASP 192 1_555 89.6 A ASP 190 D OD1 ASP 190 1_555 A MG 339 E MG MG 1_555 A DCP 338 H O1A DCP 1_555 81.9 A ASP 192 D OD2 ASP 192 1_555 A MG 339 E MG MG 1_555 A DCP 338 H O1A DCP 1_555 90.7 A ASP 190 D OD1 ASP 190 1_555 A MG 339 E MG MG 1_555 A DCP 338 H O2B DCP 1_555 173.5 A ASP 192 D OD2 ASP 192 1_555 A MG 339 E MG MG 1_555 A DCP 338 H O2B DCP 1_555 94.5 A DCP 338 H O1A DCP 1_555 A MG 339 E MG MG 1_555 A DCP 338 H O2B DCP 1_555 93.0 A ASP 190 D OD1 ASP 190 1_555 A MG 339 E MG MG 1_555 A DCP 338 H O3A DCP 1_555 123.6 A ASP 192 D OD2 ASP 192 1_555 A MG 339 E MG MG 1_555 A DCP 338 H O3A DCP 1_555 114.5 A DCP 338 H O1A DCP 1_555 A MG 339 E MG MG 1_555 A DCP 338 H O3A DCP 1_555 49.9 A DCP 338 H O2B DCP 1_555 A MG 339 E MG MG 1_555 A DCP 338 H O3A DCP 1_555 50.0 A ASP 190 D OD1 ASP 190 1_555 A MG 339 E MG MG 1_555 A DCP 338 H O1G DCP 1_555 93.2 A ASP 192 D OD2 ASP 192 1_555 A MG 339 E MG MG 1_555 A DCP 338 H O1G DCP 1_555 174.6 A DCP 338 H O1A DCP 1_555 A MG 339 E MG MG 1_555 A DCP 338 H O1G DCP 1_555 94.2 A DCP 338 H O2B DCP 1_555 A MG 339 E MG MG 1_555 A DCP 338 H O1G DCP 1_555 83.1 A DCP 338 H O3A DCP 1_555 A MG 339 E MG MG 1_555 A DCP 338 H O1G DCP 1_555 67.5 A ASP 190 D OD1 ASP 190 1_555 A MG 339 E MG MG 1_555 A HOH 346 L O HOH 1_555 90.9 A ASP 192 D OD2 ASP 192 1_555 A MG 339 E MG MG 1_555 A HOH 346 L O HOH 1_555 91.3 A DCP 338 H O1A DCP 1_555 A MG 339 E MG MG 1_555 A HOH 346 L O HOH 1_555 172.5 A DCP 338 H O2B DCP 1_555 A MG 339 E MG MG 1_555 A HOH 346 L O HOH 1_555 94.1 A DCP 338 H O3A DCP 1_555 A MG 339 E MG MG 1_555 A HOH 346 L O HOH 1_555 134.9 A DCP 338 H O1G DCP 1_555 A MG 339 E MG MG 1_555 A HOH 346 L O HOH 1_555 84.1 T 8OG 6 A 8OG 6 DG P DOC 10 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE B DOC 10 DC 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ILE 150 D N ILE 150 A O SER 188 D O SER 188 A N THR 176 D N THR 176 A O LEU 194 D O LEU 194 A N LEU 195 D N LEU 195 A O ARG 258 D O ARG 258 A O ARG 253 D O ARG 253 A N CYS 239 D N CYS 239 A O VAL 238 D O VAL 238 A N ASP 226 D N ASP 226 A N THR 201 D N THR 201 A O SER 204 D O SER 204 A N THR 292 D N THR 292 A O ARG 299 D O ARG 299 1 A MET 1 D MET 1 1 Y 1 A SER 2 D SER 2 1 Y 1 A LYS 3 D LYS 3 1 Y 1 A ARG 4 D ARG 4 1 Y 1 A LYS 5 D LYS 5 1 Y 1 A ALA 6 D ALA 6 1 Y 1 A PRO 7 D PRO 7 1 Y 1 A GLN 8 D GLN 8 1 Y 1 A GLU 9 D GLU 9 1 Y 1 D D P OP3 DG DG 1 1 -0.086 0.012 1.607 1.521 N 1 A VAL 29 -76.31 -71.62 1 A PRO 50 -80.24 31.12 1 A SER 55 -176.49 146.59 1 A ASP 91 -49.20 102.31 1 A PHE 146 -57.00 -2.09 1 A CYS 178 -82.49 -129.06 1 A SER 202 -58.71 7.63 1 A GLU 203 -159.87 0.40 1 A LYS 209 -96.46 40.91 1 A LEU 228 -69.69 -91.62 1 A LYS 230 -160.17 106.32 1 A LYS 244 -82.33 -143.63 1 A ASP 246 66.62 -13.51 1 A PHE 272 -57.41 -6.51 1 A LEU 301 -94.01 56.24 PROTEIN.PARAM DNA-RNA.PARAM WATER.PARAM ION.PARAM 22.42 -14.235 0.0 -15.806 18.549 0.0 -4.313 REFINEMENT PARAMETERS FOR 8-OXO-G ARE BASED ON SEVERAL SMALL MOLECULE OBSERVATIONS. DIHEDRAL RESTRAINTS FROM DNA-RNA.PARAM WERE DISABLED TO ALLOW FOR DEVIATIONS FROM CANONICAL B-FORM VALUES, WHICH HAVE BEEN OBSERVED IN HIGH-RESOLUTION DATA FROM SIMILAR POLYMERASE BETA DNA COMPLEXES. 0.295 0.235 0.246 0.246 2.8 20.0 481 10177 10177 4.7 97.8 RANDOM 1 THROUGHOUT 0.0 MOLECULAR REPLACEMENT 1BPY Engh & Huber 10.0 0.2998 2.8 20.0 78 3354 31 632 2613 0.005 1.10 1.324 1.855 2.186 2.869 2.8 20.0 1MQ3 10209 -3.0 0.108 1 5.5 2.51 97.8 0.339 2.80 2.93 1.9 95.9 data reduction DENZO data scaling SCALEPACK refinement CNS phasing CNS Human DNA Polymerase Beta Complexed With Gapped DNA Containing an 8-oxo-7,8-dihydro-Guanine Template Paired with dCTP 1 N N 2 N N 3 N N 4 N N 5 N N 6 N N 6 N N 7 N N 8 N N 8 N N 8 N N 8 N N A ASN 12 D ASN 12 HELX_P A VAL 29 D VAL 29 1 1 18 A ALA 32 D ALA 32 HELX_P A TYR 49 D TYR 49 1 2 18 A SER 55 D SER 55 HELX_P A LYS 61 D LYS 61 1 3 7 A THR 67 D THR 67 HELX_P A GLY 80 D GLY 80 1 4 14 A LEU 82 D LEU 82 HELX_P A ASP 91 D ASP 91 1 5 10 A THR 93 D THR 93 HELX_P A THR 101 D THR 101 1 6 9 A GLY 107 D GLY 107 HELX_P A ASP 116 D ASP 116 1 7 10 A THR 121 D THR 121 HELX_P A ASN 128 D ASN 128 1 8 8 A ASN 133 D ASN 133 HELX_P A PHE 143 D PHE 143 1 9 11 A GLY 144 D GLY 144 HELX_P A LYS 148 D LYS 148 5 10 5 A ARG 152 D ARG 152 HELX_P A ASP 170 D ASP 170 1 11 19 A CYS 178 D CYS 178 HELX_P A ARG 183 D ARG 183 1 12 6 A LYS 209 D LYS 209 HELX_P A VAL 221 D VAL 221 1 13 13 A PRO 261 D PRO 261 HELX_P A ASP 263 D ASP 263 5 14 3 A GLN 264 D GLN 264 HELX_P A GLY 274 D GLY 274 1 15 11 A SER 275 D SER 275 HELX_P A GLY 290 D GLY 290 1 16 16 A SER 315 D SER 315 HELX_P A ILE 323 D ILE 323 1 17 9 A GLU 329 D GLU 329 HELX_P A ARG 333 D ARG 333 5 18 5 covale 1.605 both T DC 5 A O3' DC 5 1_555 T 8OG 6 A P 8OG 6 1_555 covale 1.608 both T 8OG 6 A O3' 8OG 6 1_555 T DG 7 A P DG 7 1_555 covale 1.609 both P DG 9 B O3' DG 9 1_555 P DOC 10 B P DOC 10 1_555 metalc 2.247 P DG 9 B OP1 DG 9 1_555 A NA 341 F NA NA 1_555 metalc 2.247 P HOH 344 J O HOH 1_555 A NA 341 F NA NA 1_555 metalc 2.497 D DC 3 C OP1 DC 3 1_555 A NA 342 G NA NA 1_555 metalc 2.433 D HOH 346 K O HOH 1_555 A NA 342 G NA NA 1_555 metalc 2.387 A LYS 60 D O LYS 60 1_555 A NA 342 G NA NA 1_555 metalc 2.490 A LEU 62 D O LEU 62 1_555 A NA 342 G NA NA 1_555 metalc 2.517 A VAL 65 D O VAL 65 1_555 A NA 342 G NA NA 1_555 metalc 2.250 A THR 101 D O THR 101 1_555 A NA 341 F NA NA 1_555 metalc 2.450 A VAL 103 D O VAL 103 1_555 A NA 341 F NA NA 1_555 metalc 2.587 A ILE 106 D O ILE 106 1_555 A NA 341 F NA NA 1_555 metalc 1.828 A ASP 190 D OD1 ASP 190 1_555 A MG 339 E MG MG 1_555 metalc 2.111 A ASP 192 D OD2 ASP 192 1_555 A MG 339 E MG MG 1_555 metalc 1.979 A DCP 338 H O1A DCP 1_555 A MG 339 E MG MG 1_555 metalc 1.942 A DCP 338 H O2B DCP 1_555 A MG 339 E MG MG 1_555 metalc 3.141 A DCP 338 H O3A DCP 1_555 A MG 339 E MG MG 1_555 metalc 2.092 A DCP 338 H O1G DCP 1_555 A MG 339 E MG MG 1_555 metalc 1.980 A MG 339 E MG MG 1_555 A HOH 346 L O HOH 1_555 metalc 2.600 A NA 341 F NA NA 1_555 A HOH 345 L O HOH 1_555 metalc 2.549 A NA 342 G NA NA 1_555 A HOH 347 L O HOH 1_555 hydrog DC-DG PAIR T DC 1 A O2 DC 1 1_555 D DG 5 C N1 DG 5 1_555 hydrog WATSON-CRICK T DC 2 A N3 DC 2 1_555 D DG 4 C N1 DG 4 1_555 hydrog WATSON-CRICK T DC 2 A N4 DC 2 1_555 D DG 4 C O6 DG 4 1_555 hydrog WATSON-CRICK T DC 2 A O2 DC 2 1_555 D DG 4 C N2 DG 4 1_555 hydrog WATSON-CRICK T DG 3 A N1 DG 3 1_555 D DC 3 C N3 DC 3 1_555 hydrog WATSON-CRICK T DG 3 A N2 DG 3 1_555 D DC 3 C O2 DC 3 1_555 hydrog WATSON-CRICK T DG 3 A O6 DG 3 1_555 D DC 3 C N4 DC 3 1_555 hydrog WATSON-CRICK T DA 4 A N1 DA 4 1_555 D DT 2 C N3 DT 2 1_555 hydrog WATSON-CRICK T DA 4 A N6 DA 4 1_555 D DT 2 C O4 DT 2 1_555 hydrog WATSON-CRICK T DC 5 A N3 DC 5 1_555 D DG 1 C N1 DG 1 1_555 hydrog WATSON-CRICK T DC 5 A N4 DC 5 1_555 D DG 1 C O6 DG 1 1_555 hydrog WATSON-CRICK T DC 5 A O2 DC 5 1_555 D DG 1 C N2 DG 1 1_555 hydrog WATSON-CRICK T DG 7 A N1 DG 7 1_555 P DOC 10 B N3 DOC 10 1_555 hydrog WATSON-CRICK T DG 7 A N2 DG 7 1_555 P DOC 10 B O2 DOC 10 1_555 hydrog WATSON-CRICK T DG 7 A O6 DG 7 1_555 P DOC 10 B N4 DOC 10 1_555 hydrog WATSON-CRICK T DC 8 A N3 DC 8 1_555 P DG 9 B N1 DG 9 1_555 hydrog WATSON-CRICK T DC 8 A N4 DC 8 1_555 P DG 9 B O6 DG 9 1_555 hydrog WATSON-CRICK T DC 8 A O2 DC 8 1_555 P DG 9 B N2 DG 9 1_555 hydrog WATSON-CRICK T DG 9 A N1 DG 9 1_555 P DC 8 B N3 DC 8 1_555 hydrog WATSON-CRICK T DG 9 A N2 DG 9 1_555 P DC 8 B O2 DC 8 1_555 hydrog WATSON-CRICK T DG 9 A O6 DG 9 1_555 P DC 8 B N4 DC 8 1_555 hydrog WATSON-CRICK T DC 10 A N3 DC 10 1_555 P DG 7 B N1 DG 7 1_555 hydrog WATSON-CRICK T DC 10 A N4 DC 10 1_555 P DG 7 B O6 DG 7 1_555 hydrog WATSON-CRICK T DC 10 A O2 DC 10 1_555 P DG 7 B N2 DG 7 1_555 hydrog WATSON-CRICK T DA 11 A N1 DA 11 1_555 P DT 6 B N3 DT 6 1_555 hydrog WATSON-CRICK T DA 11 A N6 DA 11 1_555 P DT 6 B O4 DT 6 1_555 hydrog WATSON-CRICK T DT 12 A N3 DT 12 1_555 P DA 5 B N1 DA 5 1_555 hydrog WATSON-CRICK T DT 12 A O4 DT 12 1_555 P DA 5 B N6 DA 5 1_555 hydrog WATSON-CRICK T DC 13 A N3 DC 13 1_555 P DG 4 B N1 DG 4 1_555 hydrog WATSON-CRICK T DC 13 A N4 DC 13 1_555 P DG 4 B O6 DG 4 1_555 hydrog WATSON-CRICK T DC 13 A O2 DC 13 1_555 P DG 4 B N2 DG 4 1_555 hydrog WATSON-CRICK T DA 14 A N1 DA 14 1_555 P DT 3 B N3 DT 3 1_555 hydrog WATSON-CRICK T DA 14 A N6 DA 14 1_555 P DT 3 B O4 DT 3 1_555 hydrog DG-DC PAIR T DG 15 A N1 DG 15 1_555 P DC 2 B N3 DC 2 1_555 hydrog WATSON-CRICK T DC 16 A N3 DC 16 1_555 P DG 1 B N1 DG 1 1_555 hydrog WATSON-CRICK T DC 16 A N4 DC 16 1_555 P DG 1 B O6 DG 1 1_555 hydrog WATSON-CRICK T DC 16 A O2 DC 16 1_555 P DG 1 B N2 DG 1 1_555 TRANSFERASE/DNA TRANSFERASE, DNA, TRANSFERASE-DNA COMPLEX A GLY 274 D GLY 274 1 A SER 275 D SER 275 0.52 DPOB_HUMAN UNP 4 1 P06746 MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE 1MQ3 PDB 1 1MQ3 1MQ3 PDB 2 1MQ3 1MQ3 PDB 3 1MQ3 1 335 1MQ3 1 335 P06746 A 1 1 335 1 16 1MQ3 1 16 1MQ3 T 2 1 16 1 10 1MQ3 1 10 1MQ3 P 3 1 10 1 5 1MQ3 1 5 1MQ3 D 4 1 5 2 5 2 2 anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel A ILE 150 D ILE 150 A PRO 151 D PRO 151 A SER 187 D SER 187 A SER 188 D SER 188 A ILE 174 D ILE 174 A VAL 177 D VAL 177 A MET 191 D MET 191 A THR 196 D THR 196 A ARG 253 D ARG 253 A LEU 259 D LEU 259 A LYS 234 D LYS 234 A CYS 239 D CYS 239 A ILE 224 D ILE 224 A LYS 230 D LYS 230 A PHE 200 D PHE 200 A THR 201 D THR 201 A SER 204 D SER 204 A THR 205 D THR 205 A PHE 291 D PHE 291 A ILE 293 D ILE 293 A ILE 298 D ILE 298 A PRO 300 D PRO 300 BINDING SITE FOR RESIDUE MG A 339 A MG 339 Software 4 BINDING SITE FOR RESIDUE NA A 341 A NA 341 Software 6 BINDING SITE FOR RESIDUE NA A 342 A NA 342 Software 6 BINDING SITE FOR RESIDUE DCP A 338 A DCP 338 Software 20 A ASP 190 D ASP 190 4 1_555 A ASP 192 D ASP 192 4 1_555 A DCP 338 H DCP 4 1_555 A HOH 346 L HOH 4 1_555 A THR 101 D THR 101 6 1_555 A VAL 103 D VAL 103 6 1_555 A ILE 106 D ILE 106 6 1_555 A HOH 345 L HOH 6 1_555 P DG 9 B DG 9 6 1_555 P HOH 344 J HOH 6 1_555 A LYS 60 D LYS 60 6 1_555 A LEU 62 D LEU 62 6 1_555 A VAL 65 D VAL 65 6 1_555 A HOH 347 L HOH 6 1_555 D DC 3 C DC 3 6 1_555 D HOH 346 K HOH 6 1_555 A ARG 149 D ARG 149 20 1_555 A GLY 179 D GLY 179 20 1_555 A SER 180 D SER 180 20 1_555 A ARG 183 D ARG 183 20 1_555 A GLY 189 D GLY 189 20 1_555 A ASP 190 D ASP 190 20 1_555 A ASP 192 D ASP 192 20 1_555 A TYR 271 D TYR 271 20 1_555 A PHE 272 D PHE 272 20 1_555 A THR 273 D THR 273 20 1_555 A GLY 274 D GLY 274 20 1_555 A ASP 276 D ASP 276 20 1_555 A ASN 279 D ASN 279 20 1_555 A MG 339 E MG 20 1_555 A HOH 346 L HOH 20 1_555 A HOH 354 L HOH 20 1_555 A HOH 389 L HOH 20 1_555 P DOC 10 B DOC 10 20 1_555 T 8OG 6 A 8OG 6 20 1_555 T DG 7 A DG 7 20 1_555 4 P 1 21 1