0.015606 0.009010 0.000000 0.000000 0.018020 0.000000 0.000000 0.000000 0.005468 0.00000 0.00000 0.00000 Kang, L.-W. Gabelli, S.B. Bianchet, M.A. Cunningham, J.E. O'Handley, S.F. Amzel, L.M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 64.078 64.078 182.887 C16 H25 N5 O13 P2 557.343 ALPHA-BETA METHYLENE ADP-RIBOSE AMPCPR; {[5-(6-AMINO-PURIN-9-YL)-3,4-DIHYDROXY-TETRAHYDRO-FURAN-2-YLMETHOXY]-HYDROXY-PHOSPHORYLMETHYL}-PHOSPHONIC ACID MONO-(3,4,5-TRIHYDROXY-TETRAHYDRO-FURAN-2-YLMETHYL) ESTER non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mn 2 54.938 MANGANESE (II) ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 R P N 2 N O N 3 N C N 4 R C N 5 N O N 6 S C N 7 N O N 8 R C N 9 N O N 10 R C Y 11 N N Y 12 N C Y 13 N N Y 14 N C Y 15 N C N 16 N N Y 17 N N Y 18 N C Y 19 N N Y 20 N C N 21 N C N 22 S P N 23 N O N 24 N O N 25 N C N 26 R C N 27 N O N 28 S C N 29 N O N 30 R C N 31 N O N 32 S C N 33 N O N 34 N O N 35 N O N 36 N O N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N N N 63 S C N 64 N C N 65 N O N 66 N C N 67 N O N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N N N 76 S C N 77 N C N 78 N O N 79 N C N 80 N C N 81 N C N 82 N N N 83 N C N 84 N N N 85 N N N 86 N O N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N N N 103 S C N 104 N C N 105 N O N 106 N C N 107 N C N 108 N O N 109 N N N 110 N O N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N N N 120 S C N 121 N C N 122 N O N 123 N C N 124 N C N 125 N O N 126 N O N 127 N O N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N N N 136 S C N 137 N C N 138 N O N 139 N C N 140 N C N 141 N C N 142 N O N 143 N N N 144 N O N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N N N 156 S C N 157 N C N 158 N O N 159 N C N 160 N C N 161 N C N 162 N O N 163 N O N 164 N O N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N N N 175 N C N 176 N C N 177 N O N 178 N O N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N N N 185 S C N 186 N C N 187 N O N 188 N C Y 189 N C Y 190 N N Y 191 N C Y 192 N C Y 193 N N N 194 N O N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N O N 206 N H N 207 N H N 208 N N N 209 S C N 210 N C N 211 N O N 212 S C N 213 N C N 214 N C N 215 N C N 216 N O N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N C N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N N N 253 S C N 254 N C N 255 N O N 256 N C N 257 N C N 258 N S N 259 N C N 260 N O N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N MN N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C Y 278 N C Y 279 N C Y 280 N C Y 281 N C Y 282 N C Y 283 N C N 284 N O N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N N N 297 S C N 298 N C N 299 N O N 300 N C N 301 N C N 302 N C N 303 N O N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N N N 314 S C N 315 N C N 316 N O N 317 N C N 318 N O N 319 N O N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N N N 328 S C N 329 N C N 330 N O N 331 R C N 332 N O N 333 N C N 334 N O N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N N N 345 S C N 346 N C N 347 N O N 348 N C Y 349 N C Y 350 N C Y 351 N C Y 352 N N Y 353 N C Y 354 N C Y 355 N C Y 356 N C Y 357 N C N 358 N O N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N N N 372 S C N 373 N C N 374 N O N 375 N C Y 376 N C Y 377 N C Y 378 N C Y 379 N C Y 380 N C Y 381 N C N 382 N O N 383 N O N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N N N 396 S C N 397 N C N 398 N O N 399 N C N 400 N C N 401 N C N 402 N O N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 1 N sing N 2 N sing N 3 N sing N 4 N doub N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing Y 23 N sing Y 24 N sing Y 25 N doub N 26 N sing Y 27 N sing Y 28 N doub Y 29 N sing N 30 N sing Y 31 N sing N 32 N sing N 33 N sing Y 34 N doub Y 35 N sing N 36 N sing Y 37 N doub N 38 N sing N 39 N sing N 40 N sing N 41 N doub N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N doub N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N doub N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N doub N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N doub N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N doub N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N doub N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N doub N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N doub N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N doub N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N doub N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing Y 191 N sing Y 192 N doub Y 193 N doub N 194 N sing Y 195 N sing N 196 N sing Y 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N doub N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N doub N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N sing N 274 N sing Y 275 N doub Y 276 N sing Y 277 N sing N 278 N sing Y 279 N doub N 280 N sing Y 281 N doub N 282 N sing Y 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N doub N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N doub N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N doub N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N doub N 340 N sing N 341 N sing N 342 N sing N 343 N sing Y 344 N doub Y 345 N sing Y 346 N sing N 347 N sing Y 348 N doub Y 349 N sing Y 350 N sing N 351 N sing Y 352 N sing Y 353 N doub N 354 N sing Y 355 N doub N 356 N sing Y 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N doub N 368 N sing N 369 N sing N 370 N sing N 371 N sing Y 372 N doub Y 373 N sing Y 374 N sing N 375 N sing Y 376 N doub N 377 N sing Y 378 N doub N 379 N sing Y 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N doub N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing UK Structure STRUE6 2005 0969-2126 11 1015 1023 10.1016/S0969-2126(03)00154-0 12906832 Structure and mechanism of MT-ADPRase, a Nudix hydrolase from Mycobacterium tuberculosis 2003 10.2210/pdb1mqw/pdb pdb_00001mqw 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 93 1 mirrors IMAGE PLATE 2002-02-03 RIGAKU RAXIS IV Ni filter SINGLE WAVELENGTH M x-ray 1 1.54 1.0 1.54 ROTATING ANODE RIGAKU RU200 22920.846 ADPR pyrophosphatase 3.6.1.13 1 man polymer 54.938 MANGANESE (II) ION 3 syn non-polymer 557.343 ALPHA-BETA METHYLENE ADP-RIBOSE 1 syn non-polymer 18.015 water 69 nat water ADPRase, MutT/nudix family protein, Hypothetical protein Rv1700 no no MAEHDFETISSETLHTGAIFALRRDQVRMPGGGIVTREVVEHFGAVAIVAMDDNGNIPMVYQYRHTYGRRLWELPAGLLD VAGEPPHLTAARELREEVGLQASTWQVLVDLDTAPGFSDESVRVYLATGLREVGRPEAHHEEADMTMGWYPIAEAARRVL RGEIVNSIAIAGVLAVHAVTTGFAQPRPLDTEWIDRPTAFAARRAER MAEHDFETISSETLHTGAIFALRRDQVRMPGGGIVTREVVEHFGAVAIVAMDDNGNIPMVYQYRHTYGRRLWELPAGLLD VAGEPPHLTAARELREEVGLQASTWQVLVDLDTAPGFSDESVRVYLATGLREVGRPEAHHEEADMTMGWYPIAEAARRVL RGEIVNSIAIAGVLAVHAVTTGFAQPRPLDTEWIDRPTAFAARRAER A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Mycobacterium Escherichia sample Rv1700 1773 Mycobacterium tuberculosis 562 Escherichia coli BLR(DE3) plasmid pET11b 1 2.36 47.95 VAPOR DIFFUSION, HANGING DROP 7.5 Sodium formate, Tris HCl, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K 298 chem_comp_atom chem_comp_bond database_2 pdbx_struct_conn_angle pdbx_unobs_or_zero_occ_atoms struct_conn struct_site repository Initial release Version format compliance Derived calculations Version format compliance Advisory Data collection Database references Derived calculations 1 0 2003-08-05 1 1 2008-04-28 1 2 2011-07-13 1 3 2024-02-14 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id The same protein complexed with ADPR The same protein (apo enzyme) The same protein complexed with three Mn2+ ions and AMP-CP The same protein complexed with 1 Mn2+ ion and AMP-CP RCSB Y RCSB 2002-09-17 REL MN MANGANESE (II) ION ADV ALPHA-BETA METHYLENE ADP-RIBOSE HOH water MN 401 2 MN MN 401 A MN 402 2 MN MN 402 A MN 403 2 MN MN 403 A ADV 301 3 ADV ADV 301 A HOH 1 4 HOH HOH 404 A HOH 2 4 HOH HOH 405 A HOH 4 4 HOH HOH 406 A HOH 5 4 HOH HOH 407 A HOH 6 4 HOH HOH 408 A HOH 7 4 HOH HOH 409 A HOH 8 4 HOH HOH 410 A HOH 9 4 HOH HOH 411 A HOH 10 4 HOH HOH 412 A HOH 11 4 HOH HOH 413 A HOH 12 4 HOH HOH 414 A HOH 13 4 HOH HOH 415 A HOH 14 4 HOH HOH 416 A HOH 15 4 HOH HOH 417 A HOH 16 4 HOH HOH 418 A HOH 17 4 HOH HOH 419 A HOH 18 4 HOH HOH 420 A HOH 19 4 HOH HOH 421 A HOH 20 4 HOH HOH 422 A HOH 21 4 HOH HOH 423 A HOH 22 4 HOH HOH 424 A HOH 23 4 HOH HOH 425 A HOH 24 4 HOH HOH 426 A HOH 25 4 HOH HOH 427 A HOH 26 4 HOH HOH 428 A HOH 27 4 HOH HOH 429 A HOH 28 4 HOH HOH 430 A HOH 29 4 HOH HOH 431 A HOH 30 4 HOH HOH 432 A HOH 32 4 HOH HOH 433 A HOH 33 4 HOH HOH 434 A HOH 34 4 HOH HOH 435 A HOH 35 4 HOH HOH 436 A HOH 36 4 HOH HOH 437 A HOH 37 4 HOH HOH 438 A HOH 38 4 HOH HOH 439 A HOH 39 4 HOH HOH 440 A HOH 40 4 HOH HOH 441 A HOH 41 4 HOH HOH 442 A HOH 42 4 HOH HOH 443 A HOH 43 4 HOH HOH 444 A HOH 44 4 HOH HOH 445 A HOH 46 4 HOH HOH 446 A HOH 47 4 HOH HOH 447 A HOH 48 4 HOH HOH 448 A HOH 49 4 HOH HOH 449 A HOH 50 4 HOH HOH 450 A HOH 51 4 HOH HOH 451 A HOH 52 4 HOH HOH 452 A HOH 53 4 HOH HOH 453 A HOH 54 4 HOH HOH 454 A HOH 55 4 HOH HOH 455 A HOH 56 4 HOH HOH 456 A HOH 57 4 HOH HOH 457 A HOH 58 4 HOH HOH 458 A HOH 59 4 HOH HOH 459 A HOH 60 4 HOH HOH 460 A HOH 61 4 HOH HOH 461 A HOH 62 4 HOH HOH 462 A HOH 63 4 HOH HOH 463 A HOH 64 4 HOH HOH 464 A HOH 65 4 HOH HOH 465 A HOH 66 4 HOH HOH 466 A HOH 67 4 HOH HOH 467 A HOH 68 4 HOH HOH 468 A HOH 69 4 HOH HOH 469 A HOH 70 4 HOH HOH 470 A HOH 71 4 HOH HOH 471 A HOH 73 4 HOH HOH 472 A n 1 1 A n 2 2 A n 3 3 A n 4 4 A ASP 5 n 5 ASP 5 A PHE 6 n 6 PHE 6 A GLU 7 n 7 GLU 7 A THR 8 n 8 THR 8 A ILE 9 n 9 ILE 9 A SER 10 n 10 SER 10 A SER 11 n 11 SER 11 A GLU 12 n 12 GLU 12 A THR 13 n 13 THR 13 A LEU 14 n 14 LEU 14 A HIS 15 n 15 HIS 15 A THR 16 n 16 THR 16 A GLY 17 n 17 GLY 17 A ALA 18 n 18 ALA 18 A ILE 19 n 19 ILE 19 A PHE 20 n 20 PHE 20 A ALA 21 n 21 ALA 21 A LEU 22 n 22 LEU 22 A ARG 23 n 23 ARG 23 A ARG 24 n 24 ARG 24 A ASP 25 n 25 ASP 25 A GLN 26 n 26 GLN 26 A VAL 27 n 27 VAL 27 A ARG 28 n 28 ARG 28 A MET 29 n 29 MET 29 A PRO 30 n 30 PRO 30 A GLY 31 n 31 GLY 31 A GLY 32 n 32 GLY 32 A GLY 33 n 33 GLY 33 A ILE 34 n 34 ILE 34 A VAL 35 n 35 VAL 35 A THR 36 n 36 THR 36 A ARG 37 n 37 ARG 37 A GLU 38 n 38 GLU 38 A VAL 39 n 39 VAL 39 A VAL 40 n 40 VAL 40 A GLU 41 n 41 GLU 41 A HIS 42 n 42 HIS 42 A PHE 43 n 43 PHE 43 A GLY 44 n 44 GLY 44 A ALA 45 n 45 ALA 45 A VAL 46 n 46 VAL 46 A ALA 47 n 47 ALA 47 A ILE 48 n 48 ILE 48 A VAL 49 n 49 VAL 49 A ALA 50 n 50 ALA 50 A MET 51 n 51 MET 51 A ASP 52 n 52 ASP 52 A ASP 53 n 53 ASP 53 A ASN 54 n 54 ASN 54 A GLY 55 n 55 GLY 55 A ASN 56 n 56 ASN 56 A ILE 57 n 57 ILE 57 A PRO 58 n 58 PRO 58 A MET 59 n 59 MET 59 A VAL 60 n 60 VAL 60 A TYR 61 n 61 TYR 61 A GLN 62 n 62 GLN 62 A TYR 63 n 63 TYR 63 A ARG 64 n 64 ARG 64 A HIS 65 n 65 HIS 65 A THR 66 n 66 THR 66 A TYR 67 n 67 TYR 67 A GLY 68 n 68 GLY 68 A ARG 69 n 69 ARG 69 A ARG 70 n 70 ARG 70 A LEU 71 n 71 LEU 71 A TRP 72 n 72 TRP 72 A GLU 73 n 73 GLU 73 A LEU 74 n 74 LEU 74 A PRO 75 n 75 PRO 75 A ALA 76 n 76 ALA 76 A GLY 77 n 77 GLY 77 A LEU 78 n 78 LEU 78 A LEU 79 n 79 LEU 79 A ASP 80 n 80 ASP 80 A VAL 81 n 81 VAL 81 A ALA 82 n 82 ALA 82 A GLY 83 n 83 GLY 83 A GLU 84 n 84 GLU 84 A PRO 85 n 85 PRO 85 A PRO 86 n 86 PRO 86 A HIS 87 n 87 HIS 87 A LEU 88 n 88 LEU 88 A THR 89 n 89 THR 89 A ALA 90 n 90 ALA 90 A ALA 91 n 91 ALA 91 A ARG 92 n 92 ARG 92 A GLU 93 n 93 GLU 93 A LEU 94 n 94 LEU 94 A ARG 95 n 95 ARG 95 A GLU 96 n 96 GLU 96 A GLU 97 n 97 GLU 97 A VAL 98 n 98 VAL 98 A GLY 99 n 99 GLY 99 A LEU 100 n 100 LEU 100 A GLN 101 n 101 GLN 101 A ALA 102 n 102 ALA 102 A SER 103 n 103 SER 103 A THR 104 n 104 THR 104 A TRP 105 n 105 TRP 105 A GLN 106 n 106 GLN 106 A VAL 107 n 107 VAL 107 A LEU 108 n 108 LEU 108 A VAL 109 n 109 VAL 109 A ASP 110 n 110 ASP 110 A LEU 111 n 111 LEU 111 A ASP 112 n 112 ASP 112 A THR 113 n 113 THR 113 A ALA 114 n 114 ALA 114 A PRO 115 n 115 PRO 115 A GLY 116 n 116 GLY 116 A PHE 117 n 117 PHE 117 A SER 118 n 118 SER 118 A ASP 119 n 119 ASP 119 A GLU 120 n 120 GLU 120 A SER 121 n 121 SER 121 A VAL 122 n 122 VAL 122 A ARG 123 n 123 ARG 123 A VAL 124 n 124 VAL 124 A TYR 125 n 125 TYR 125 A LEU 126 n 126 LEU 126 A ALA 127 n 127 ALA 127 A THR 128 n 128 THR 128 A GLY 129 n 129 GLY 129 A LEU 130 n 130 LEU 130 A ARG 131 n 131 ARG 131 A GLU 132 n 132 GLU 132 A VAL 133 n 133 VAL 133 A GLY 134 n 134 GLY 134 A ARG 135 n 135 ARG 135 A PRO 136 n 136 PRO 136 A GLU 137 n 137 GLU 137 A ALA 138 n 138 ALA 138 A HIS 139 n 139 HIS 139 A HIS 140 n 140 HIS 140 A GLU 141 n 141 GLU 141 A GLU 142 n 142 GLU 142 A ALA 143 n 143 ALA 143 A ASP 144 n 144 ASP 144 A MET 145 n 145 MET 145 A THR 146 n 146 THR 146 A MET 147 n 147 MET 147 A GLY 148 n 148 GLY 148 A TRP 149 n 149 TRP 149 A TYR 150 n 150 TYR 150 A PRO 151 n 151 PRO 151 A ILE 152 n 152 ILE 152 A ALA 153 n 153 ALA 153 A GLU 154 n 154 GLU 154 A ALA 155 n 155 ALA 155 A ALA 156 n 156 ALA 156 A ARG 157 n 157 ARG 157 A ARG 158 n 158 ARG 158 A VAL 159 n 159 VAL 159 A LEU 160 n 160 LEU 160 A ARG 161 n 161 ARG 161 A GLY 162 n 162 GLY 162 A GLU 163 n 163 GLU 163 A ILE 164 n 164 ILE 164 A VAL 165 n 165 VAL 165 A ASN 166 n 166 ASN 166 A SER 167 n 167 SER 167 A ILE 168 n 168 ILE 168 A ALA 169 n 169 ALA 169 A ILE 170 n 170 ILE 170 A ALA 171 n 171 ALA 171 A GLY 172 n 172 GLY 172 A VAL 173 n 173 VAL 173 A LEU 174 n 174 LEU 174 A ALA 175 n 175 ALA 175 A VAL 176 n 176 VAL 176 A HIS 177 n 177 HIS 177 A ALA 178 n 178 ALA 178 A VAL 179 n 179 VAL 179 A THR 180 n 180 THR 180 A THR 181 n 181 THR 181 A GLY 182 n 182 GLY 182 A PHE 183 n 183 PHE 183 A ALA 184 n 184 ALA 184 A GLN 185 n 185 GLN 185 A PRO 186 n 186 PRO 186 A ARG 187 n 187 ARG 187 A PRO 188 n 188 PRO 188 A LEU 189 n 189 LEU 189 A ASP 190 n 190 ASP 190 A THR 191 n 191 THR 191 A GLU 192 n 192 GLU 192 A TRP 193 n 193 TRP 193 A ILE 194 n 194 ILE 194 A ASP 195 n 195 ASP 195 A ARG 196 n 196 ARG 196 A PRO 197 n 197 PRO 197 A THR 198 n 198 THR 198 A ALA 199 n 199 ALA 199 A PHE 200 n 200 PHE 200 A ALA 201 n 201 ALA 201 A ALA 202 n 202 ALA 202 A ARG 203 n 203 ARG 203 A ARG 204 n 204 ARG 204 A n 205 205 A n 206 206 A n 207 207 A author_and_software_defined_assembly PISA,PQS 2 dimeric 8410 -86 15160 A ALA 76 A O ALA 76 1_555 A MN 401 B MN MN 1_555 A GLU 97 A OE2 GLU 97 1_555 90.1 A ALA 76 A O ALA 76 1_555 A MN 401 B MN MN 1_555 A ADV 301 E OR5 ADV 1_555 102.0 A GLU 97 A OE2 GLU 97 1_555 A MN 401 B MN MN 1_555 A ADV 301 E OR5 ADV 1_555 156.4 A ALA 76 A O ALA 76 1_555 A MN 401 B MN MN 1_555 A ADV 301 E O2A ADV 1_555 97.1 A GLU 97 A OE2 GLU 97 1_555 A MN 401 B MN MN 1_555 A ADV 301 E O2A ADV 1_555 92.6 A ADV 301 E OR5 ADV 1_555 A MN 401 B MN MN 1_555 A ADV 301 E O2A ADV 1_555 105.7 A ALA 76 A O ALA 76 1_555 A MN 401 B MN MN 1_555 A HOH 406 F O HOH 1_555 164.3 A GLU 97 A OE2 GLU 97 1_555 A MN 401 B MN MN 1_555 A HOH 406 F O HOH 1_555 74.4 A ADV 301 E OR5 ADV 1_555 A MN 401 B MN MN 1_555 A HOH 406 F O HOH 1_555 92.0 A ADV 301 E O2A ADV 1_555 A MN 401 B MN MN 1_555 A HOH 406 F O HOH 1_555 85.8 A ALA 76 A O ALA 76 1_555 A MN 401 B MN MN 1_555 A HOH 412 F O HOH 1_555 83.6 A GLU 97 A OE2 GLU 97 1_555 A MN 401 B MN MN 1_555 A HOH 412 F O HOH 1_555 69.5 A ADV 301 E OR5 ADV 1_555 A MN 401 B MN MN 1_555 A HOH 412 F O HOH 1_555 91.5 A ADV 301 E O2A ADV 1_555 A MN 401 B MN MN 1_555 A HOH 412 F O HOH 1_555 162.1 A HOH 406 F O HOH 1_555 A MN 401 B MN MN 1_555 A HOH 412 F O HOH 1_555 88.9 A GLU 93 A OE1 GLU 93 1_555 A MN 402 C MN MN 1_555 A GLU 97 A OE2 GLU 97 1_555 95.0 A GLU 93 A OE1 GLU 93 1_555 A MN 402 C MN MN 1_555 A GLU 142 A OE2 GLU 142 1_555 163.9 A GLU 97 A OE2 GLU 97 1_555 A MN 402 C MN MN 1_555 A GLU 142 A OE2 GLU 142 1_555 91.6 A GLU 93 A OE1 GLU 93 1_555 A MN 402 C MN MN 1_555 A ADV 301 E O2A ADV 1_555 111.4 A GLU 97 A OE2 GLU 97 1_555 A MN 402 C MN MN 1_555 A ADV 301 E O2A ADV 1_555 77.7 A GLU 142 A OE2 GLU 142 1_555 A MN 402 C MN MN 1_555 A ADV 301 E O2A ADV 1_555 84.4 A GLU 93 A OE1 GLU 93 1_555 A MN 402 C MN MN 1_555 A HOH 407 F O HOH 1_555 95.9 A GLU 97 A OE2 GLU 97 1_555 A MN 402 C MN MN 1_555 A HOH 407 F O HOH 1_555 163.3 A GLU 142 A OE2 GLU 142 1_555 A MN 402 C MN MN 1_555 A HOH 407 F O HOH 1_555 81.2 A ADV 301 E O2A ADV 1_555 A MN 402 C MN MN 1_555 A HOH 407 F O HOH 1_555 86.6 A GLU 93 A OE2 GLU 93 1_555 A MN 403 D MN MN 1_555 A ADV 301 E O1A ADV 1_555 91.2 A GLU 93 A OE2 GLU 93 1_555 A MN 403 D MN MN 1_555 A HOH 404 F O HOH 1_555 177.2 A ADV 301 E O1A ADV 1_555 A MN 403 D MN MN 1_555 A HOH 404 F O HOH 1_555 90.8 A GLU 93 A OE2 GLU 93 1_555 A MN 403 D MN MN 1_555 A HOH 405 F O HOH 1_555 83.7 A ADV 301 E O1A ADV 1_555 A MN 403 D MN MN 1_555 A HOH 405 F O HOH 1_555 99.0 A HOH 404 F O HOH 1_555 A MN 403 D MN MN 1_555 A HOH 405 F O HOH 1_555 94.0 A GLU 93 A OE2 GLU 93 1_555 A MN 403 D MN MN 1_555 A HOH 407 F O HOH 1_555 83.7 A ADV 301 E O1A ADV 1_555 A MN 403 D MN MN 1_555 A HOH 407 F O HOH 1_555 92.8 A HOH 404 F O HOH 1_555 A MN 403 D MN MN 1_555 A HOH 407 F O HOH 1_555 98.2 A HOH 405 F O HOH 1_555 A MN 403 D MN MN 1_555 A HOH 407 F O HOH 1_555 162.9 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.5000000000 0.8660254038 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 12_555 x,x-y,-z+1/6 crystal symmetry operation 0.0000000000 0.0000000000 30.4811666667 A N HIS 15 A N HIS 15 A O LEU 22 A O LEU 22 A N ALA 21 A N ALA 21 A O GLU 41 A O GLU 41 A O GLY 77 A O GLY 77 A N VAL 46 A N VAL 46 A N VAL 49 A N VAL 49 A O TYR 125 A O TYR 125 A O VAL 124 A O VAL 124 A N VAL 109 A N VAL 109 A O ARG 69 A O ARG 69 A N ARG 64 A N ARG 64 A N ILE 57 A N ILE 57 A O TYR 150 A O TYR 150 1 A CB ASP 53 A CB ASP 53 1 Y 1 A CG ASP 53 A CG ASP 53 1 Y 1 A OD1 ASP 53 A OD1 ASP 53 1 Y 1 A OD2 ASP 53 A OD2 ASP 53 1 Y 1 A MET 1 A MET 1 1 Y 1 A ALA 2 A ALA 2 1 Y 1 A GLU 3 A GLU 3 1 Y 1 A HIS 4 A HIS 4 1 Y 1 A ALA 205 A ALA 205 1 Y 1 A GLU 206 A GLU 206 1 Y 1 A ARG 207 A ARG 207 1 Y 1 A LEU 79 -92.20 57.83 1 A LEU 108 -92.45 -63.22 1 A HIS 140 52.24 -132.14 1 A THR 198 -139.54 -30.43 0.266 0.205 2.3 30 1027 10275 10275 random 1 0 MIR Engh & Huber 2.3 30 69 1651 30 0 1552 0.00907 1.430 1.166 2.023 2.3 30 1MQW 10633 10275 0 0 0.139 1 9.0 96.8 2.3 2.38 4.9 0.446 1 95.5 data reduction DENZO data scaling SCALEPACK refinement CNS phasing CNS Structure of the MT-ADPRase in complex with three Mn2+ ions and AMPCPR, a Nudix enzyme 1 N N 2 N N 2 N N 2 N N 3 N N 4 N N The second part of the biological assembly is generated by the two fold axis A PRO 85 A PRO 85 HELX_P A GLY 99 A GLY 99 1 1 15 A HIS 140 A HIS 140 HELX_P A MET 145 A MET 145 1 2 6 A ILE 152 A ILE 152 HELX_P A ARG 161 A ARG 161 1 3 10 A ASN 166 A ASN 166 HELX_P A THR 181 A THR 181 1 4 16 A THR 198 A THR 198 HELX_P A ARG 204 A ARG 204 1 5 7 metalc 2.115 A ALA 76 A O ALA 76 1_555 A MN 401 B MN MN 1_555 metalc 2.121 A GLU 93 A OE1 GLU 93 1_555 A MN 402 C MN MN 1_555 metalc 2.148 A GLU 93 A OE2 GLU 93 1_555 A MN 403 D MN MN 1_555 metalc 2.144 A GLU 97 A OE2 GLU 97 1_555 A MN 401 B MN MN 1_555 metalc 2.744 A GLU 97 A OE2 GLU 97 1_555 A MN 402 C MN MN 1_555 metalc 2.133 A GLU 142 A OE2 GLU 142 1_555 A MN 402 C MN MN 1_555 metalc 2.069 A ADV 301 E OR5 ADV 1_555 A MN 401 B MN MN 1_555 metalc 2.086 A ADV 301 E O2A ADV 1_555 A MN 401 B MN MN 1_555 metalc 2.059 A ADV 301 E O2A ADV 1_555 A MN 402 C MN MN 1_555 metalc 2.100 A ADV 301 E O1A ADV 1_555 A MN 403 D MN MN 1_555 metalc 2.124 A MN 401 B MN MN 1_555 A HOH 406 F O HOH 1_555 metalc 2.109 A MN 401 B MN MN 1_555 A HOH 412 F O HOH 1_555 metalc 2.178 A MN 402 C MN MN 1_555 A HOH 407 F O HOH 1_555 metalc 2.119 A MN 403 D MN MN 1_555 A HOH 404 F O HOH 1_555 metalc 2.137 A MN 403 D MN MN 1_555 A HOH 405 F O HOH 1_555 metalc 2.180 A MN 403 D MN MN 1_555 A HOH 407 F O HOH 1_555 HYDROLASE Nudix hydrolase, Rv1700, ADPR, Mycobacterium Tuberculosis, HYDROLASE O33199_MYCTU UNP 1 1 O33199 MAEHDFETISSETLHTGAIFALRRDQVRMPGGGIVTREVVEHFGAVAIVAMDDNGNIPMVYQYRHTYGRRLWELPAGLLD VAGEPPHLTAARELREEVGLQASTWQVLVDLDTAPGFSDESVRVYLATGLREVGRPEAHHEEADMTMGWYPIAEAARRVL RGEIVNSIAIAGVLAVHAVTTGFAQPRPLDTEWIDRPTAFAARRAER 1 207 1MQW 1 207 O33199 A 1 1 207 3 4 3 anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel A THR 8 A THR 8 A THR 16 A THR 16 A PHE 20 A PHE 20 A ARG 28 A ARG 28 A ILE 34 A ILE 34 A HIS 42 A HIS 42 A ALA 76 A ALA 76 A LEU 78 A LEU 78 A ALA 45 A ALA 45 A ALA 50 A ALA 50 A VAL 122 A VAL 122 A GLU 132 A GLU 132 A LEU 100 A LEU 100 A LEU 111 A LEU 111 A ARG 69 A ARG 69 A GLU 73 A GLU 73 A ASN 56 A ASN 56 A ARG 64 A ARG 64 A THR 146 A THR 146 A PRO 151 A PRO 151 BINDING SITE FOR RESIDUE MN A 401 A MN 401 Software 6 BINDING SITE FOR RESIDUE MN A 402 A MN 402 Software 6 BINDING SITE FOR RESIDUE MN A 403 A MN 403 Software 6 BINDING SITE FOR RESIDUE ADV A 301 A ADV 301 Software 21 A ALA 76 A ALA 76 6 1_555 A GLU 97 A GLU 97 6 1_555 A ADV 301 E ADV 6 1_555 A MN 402 C MN 6 1_555 A HOH 406 F HOH 6 1_555 A HOH 412 F HOH 6 1_555 A GLU 93 A GLU 93 6 1_555 A GLU 97 A GLU 97 6 1_555 A GLU 142 A GLU 142 6 1_555 A ADV 301 E ADV 6 1_555 A MN 401 B MN 6 1_555 A HOH 407 F HOH 6 1_555 A ARG 92 A ARG 92 6 1_555 A GLU 93 A GLU 93 6 1_555 A ADV 301 E ADV 6 1_555 A HOH 404 F HOH 6 1_555 A HOH 405 F HOH 6 1_555 A HOH 407 F HOH 6 1_555 A ARG 37 A ARG 37 21 12_555 A GLN 62 A GLN 62 21 1_555 A ARG 64 A ARG 64 21 1_555 A ALA 76 A ALA 76 21 1_555 A GLY 77 A GLY 77 21 1_555 A LEU 78 A LEU 78 21 1_555 A GLU 93 A GLU 93 21 1_555 A GLU 97 A GLU 97 21 1_555 A GLY 116 A GLY 116 21 12_555 A HIS 139 A HIS 139 21 1_555 A HIS 140 A HIS 140 21 1_555 A GLU 142 A GLU 142 21 1_555 A MN 401 B MN 21 1_555 A MN 402 C MN 21 1_555 A MN 403 D MN 21 1_555 A HOH 404 F HOH 21 1_555 A HOH 406 F HOH 21 1_555 A HOH 407 F HOH 21 1_555 A HOH 410 F HOH 21 1_555 A HOH 412 F HOH 21 1_555 A HOH 413 F HOH 21 1_555 178 P 61 2 2