0.013252 0.007651 0.000000 0.000000 0.015302 0.000000 0.000000 0.000000 0.007500 0.00000 0.00000 0.00000 Haouz, A. Vanheusden, V. Munier-Lehmann, H. Froeyen, M. Herdewijn, P. Van Calenbergh, S. Delarue, M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 75.460 75.460 133.340 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C20 H30 N7 O23 P5 891.354 P1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N MG N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C Y 261 N C N 262 N O N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N N N 275 S C N 276 N C N 277 N O N 278 N C N 279 N C N 280 N C N 281 N O N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N N N 292 S C N 293 N C N 294 N O N 295 N C N 296 N O N 297 N O N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N S N 306 N O N 307 N O N 308 N O N 309 N O N 310 N N N 311 N C N 312 N C N 313 N O N 314 N N N 315 N C N 316 N O N 317 N C N 318 N C N 319 N C N 320 R C N 321 N O N 322 R C N 323 N C N 324 S C N 325 N O N 326 R P N 327 N O N 328 N O N 329 N O N 330 N O N 331 S P N 332 N O N 333 N O N 334 N O N 335 N P N 336 N O N 337 N O N 338 N O N 339 S P N 340 N O N 341 N O N 342 N O N 343 R P N 344 N O N 345 N O N 346 N O N 347 N C N 348 R C N 349 N O N 350 R C N 351 R C N 352 N O N 353 S C N 354 N O Y 355 N N Y 356 N C Y 357 N N Y 358 N C Y 359 N N Y 360 N C N 361 N N Y 362 N C Y 363 N N Y 364 N C N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N N N 396 S C N 397 N C N 398 N O N 399 R C N 400 N O N 401 N C N 402 N O N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N N N 413 S C N 414 N C N 415 N O N 416 N C Y 417 N C Y 418 N C Y 419 N C Y 420 N N Y 421 N C Y 422 N C Y 423 N C Y 424 N C Y 425 N C N 426 N O N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N N N 440 S C N 441 N C N 442 N O N 443 N C Y 444 N C Y 445 N C Y 446 N C Y 447 N C Y 448 N C Y 449 N C N 450 N O N 451 N O N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N N N 464 S C N 465 N C N 466 N O N 467 N C N 468 N C N 469 N C N 470 N O N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 479 N H N 480 N H N 481 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N doub N 291 N doub N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N doub N 298 N sing N 299 N doub N 300 N sing N 301 N sing N 302 N sing N 303 N doub N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N doub N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N doub N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N doub N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N doub N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N doub N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing Y 368 N sing Y 369 N sing Y 370 N sing Y 371 N doub Y 372 N doub Y 373 N sing N 374 N sing Y 375 N doub N 376 N sing Y 377 N sing N 378 N sing N 379 N sing Y 380 N sing Y 381 N doub N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N doub N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N doub N 406 N sing N 407 N sing N 408 N sing N 409 N sing Y 410 N doub Y 411 N sing Y 412 N sing N 413 N sing Y 414 N doub Y 415 N sing Y 416 N sing N 417 N sing Y 418 N sing Y 419 N doub N 420 N sing Y 421 N doub N 422 N sing Y 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N doub N 434 N sing N 435 N sing N 436 N sing N 437 N sing Y 438 N doub Y 439 N sing Y 440 N sing N 441 N sing Y 442 N doub N 443 N sing Y 444 N doub N 445 N sing Y 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N doub N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing US J.Biol.Chem. JBCHA3 0071 0021-9258 278 4963 4971 10.1074/jbc.M209630200 12454011 Enzymatic and structural analysis of inhibitors designed against Mycobacterium tuberculosis thymidylate kinase. New insights into the phosphoryl transfer mechanism. 2003 10.2210/pdb1mrn/pdb pdb_00001mrn 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 110 1 Osmic Mirrors IMAGE PLATE 2002-01-30 MARRESEARCH Graphite SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU200 22662.525 Thymidylate Kinase 2.7.4.9 1 man polymer 96.063 SULFATE ION 2 syn non-polymer 24.305 MAGNESIUM ION 1 syn non-polymer 891.354 P1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE 1 syn non-polymer 18.015 water 58 nat water dTMP kinase, Thymidylic kinase, TMPK no no MLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLASSVYAMATLFALDRAGAVHT IQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGR ARDNYERDAELQQRTGAVYAELAAQGWGGRWLVVGADVDPGRLAATLAPPDVPS MLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLASSVYAMATLFALDRAGAVHT IQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGR ARDNYERDAELQQRTGAVYAELAAQGWGGRWLVVGADVDPGRLAATLAPPDVPS A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Mycobacterium Escherichia sample 1773 Mycobacterium tuberculosis 562 Escherichia coli Plasmid pET22B 1 2.42 49.13 VAPOR DIFFUSION, HANGING DROP 6.0 Ammonium sulfate, PEG600, MES, Magnesium acetate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 290K 290 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_conn struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations Refinement description 1 0 2003-01-07 1 1 2008-04-28 1 2 2011-07-13 1 3 2024-02-14 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Complexed With Thymidine Monophosphate (Tmp) Crystal Structure of Mycobacterium Tuberculosis Thymidylate Kinase Complexed with 5-CH2OH Deoxyuridine Monophosphate RCSB Y RCSB 2002-09-18 REL REL SO4 SULFATE ION MG MAGNESIUM ION T5A P1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE HOH water 1G3U PDB ENTRY 1G3U PDB experimental model SO4 219 2 SO4 SO4 219 A SO4 220 2 SO4 SO4 220 A MG 300 3 MG MG 300 A T5A 214 4 T5A T5A 301 A HOH 1 5 HOH HOH 302 A HOH 2 5 HOH HOH 303 A HOH 3 5 HOH HOH 304 A HOH 4 5 HOH HOH 305 A HOH 5 5 HOH HOH 306 A HOH 6 5 HOH HOH 307 A HOH 7 5 HOH HOH 308 A HOH 8 5 HOH HOH 309 A HOH 9 5 HOH HOH 310 A HOH 10 5 HOH HOH 311 A HOH 11 5 HOH HOH 312 A HOH 12 5 HOH HOH 313 A HOH 13 5 HOH HOH 314 A HOH 14 5 HOH HOH 315 A HOH 15 5 HOH HOH 316 A HOH 16 5 HOH HOH 317 A HOH 17 5 HOH HOH 318 A HOH 18 5 HOH HOH 319 A HOH 19 5 HOH HOH 320 A HOH 20 5 HOH HOH 321 A HOH 21 5 HOH HOH 322 A HOH 22 5 HOH HOH 323 A HOH 23 5 HOH HOH 324 A HOH 24 5 HOH HOH 325 A HOH 25 5 HOH HOH 326 A HOH 26 5 HOH HOH 327 A HOH 27 5 HOH HOH 328 A HOH 28 5 HOH HOH 329 A HOH 29 5 HOH HOH 330 A HOH 30 5 HOH HOH 331 A HOH 31 5 HOH HOH 332 A HOH 32 5 HOH HOH 333 A HOH 33 5 HOH HOH 334 A HOH 34 5 HOH HOH 335 A HOH 35 5 HOH HOH 336 A HOH 36 5 HOH HOH 337 A HOH 37 5 HOH HOH 338 A HOH 38 5 HOH HOH 339 A HOH 39 5 HOH HOH 340 A HOH 40 5 HOH HOH 341 A HOH 41 5 HOH HOH 342 A HOH 42 5 HOH HOH 343 A HOH 43 5 HOH HOH 344 A HOH 44 5 HOH HOH 345 A HOH 45 5 HOH HOH 346 A HOH 46 5 HOH HOH 347 A HOH 47 5 HOH HOH 348 A HOH 48 5 HOH HOH 349 A HOH 49 5 HOH HOH 350 A HOH 50 5 HOH HOH 351 A HOH 51 5 HOH HOH 352 A HOH 52 5 HOH HOH 353 A HOH 53 5 HOH HOH 354 A HOH 54 5 HOH HOH 355 A HOH 55 5 HOH HOH 356 A HOH 56 5 HOH HOH 357 A HOH 57 5 HOH HOH 358 A HOH 58 5 HOH HOH 359 A MET 1 n 1 MET 1 A LEU 2 n 2 LEU 2 A ILE 3 n 3 ILE 3 A ALA 4 n 4 ALA 4 A ILE 5 n 5 ILE 5 A GLU 6 n 6 GLU 6 A GLY 7 n 7 GLY 7 A VAL 8 n 8 VAL 8 A ASP 9 n 9 ASP 9 A GLY 10 n 10 GLY 10 A ALA 11 n 11 ALA 11 A GLY 12 n 12 GLY 12 A LYS 13 n 13 LYS 13 A ARG 14 n 14 ARG 14 A THR 15 n 15 THR 15 A LEU 16 n 16 LEU 16 A VAL 17 n 17 VAL 17 A GLU 18 n 18 GLU 18 A LYS 19 n 19 LYS 19 A LEU 20 n 20 LEU 20 A SER 21 n 21 SER 21 A GLY 22 n 22 GLY 22 A ALA 23 n 23 ALA 23 A PHE 24 n 24 PHE 24 A ARG 25 n 25 ARG 25 A ALA 26 n 26 ALA 26 A ALA 27 n 27 ALA 27 A GLY 28 n 28 GLY 28 A ARG 29 n 29 ARG 29 A SER 30 n 30 SER 30 A VAL 31 n 31 VAL 31 A ALA 32 n 32 ALA 32 A THR 33 n 33 THR 33 A LEU 34 n 34 LEU 34 A ALA 35 n 35 ALA 35 A PHE 36 n 36 PHE 36 A PRO 37 n 37 PRO 37 A ARG 38 n 38 ARG 38 A TYR 39 n 39 TYR 39 A GLY 40 n 40 GLY 40 A GLN 41 n 41 GLN 41 A SER 42 n 42 SER 42 A VAL 43 n 43 VAL 43 A ALA 44 n 44 ALA 44 A ALA 45 n 45 ALA 45 A ASP 46 n 46 ASP 46 A ILE 47 n 47 ILE 47 A ALA 48 n 48 ALA 48 A ALA 49 n 49 ALA 49 A GLU 50 n 50 GLU 50 A ALA 51 n 51 ALA 51 A LEU 52 n 52 LEU 52 A HIS 53 n 53 HIS 53 A GLY 54 n 54 GLY 54 A GLU 55 n 55 GLU 55 A HIS 56 n 56 HIS 56 A GLY 57 n 57 GLY 57 A ASP 58 n 58 ASP 58 A LEU 59 n 59 LEU 59 A ALA 60 n 60 ALA 60 A SER 61 n 61 SER 61 A SER 62 n 62 SER 62 A VAL 63 n 63 VAL 63 A TYR 64 n 64 TYR 64 A ALA 65 n 65 ALA 65 A MET 66 n 66 MET 66 A ALA 67 n 67 ALA 67 A THR 68 n 68 THR 68 A LEU 69 n 69 LEU 69 A PHE 70 n 70 PHE 70 A ALA 71 n 71 ALA 71 A LEU 72 n 72 LEU 72 A ASP 73 n 73 ASP 73 A ARG 74 n 74 ARG 74 A ALA 75 n 75 ALA 75 A GLY 76 n 76 GLY 76 A ALA 77 n 77 ALA 77 A VAL 78 n 78 VAL 78 A HIS 79 n 79 HIS 79 A THR 80 n 80 THR 80 A ILE 81 n 81 ILE 81 A GLN 82 n 82 GLN 82 A GLY 83 n 83 GLY 83 A LEU 84 n 84 LEU 84 A CYS 85 n 85 CYS 85 A ALA 86 n 86 ARG 86 A GLY 87 n 87 GLY 87 A TYR 88 n 88 TYR 88 A ASP 89 n 89 ASP 89 A VAL 90 n 90 VAL 90 A VAL 91 n 91 VAL 91 A ILE 92 n 92 ILE 92 A LEU 93 n 93 LEU 93 A ASP 94 n 94 ASP 94 A ARG 95 n 95 ARG 95 A TYR 96 n 96 TYR 96 A VAL 97 n 97 VAL 97 A ALA 98 n 98 ALA 98 A SER 99 n 99 SER 99 A ASN 100 n 100 ASN 100 A ALA 101 n 101 ALA 101 A ALA 102 n 102 ALA 102 A TYR 103 n 103 TYR 103 A SER 104 n 104 SER 104 A ALA 105 n 105 ALA 105 A ALA 106 n 106 ALA 106 A ARG 107 n 107 ARG 107 A LEU 108 n 108 LEU 108 A HIS 109 n 109 HIS 109 A GLU 110 n 110 GLU 110 A ASN 111 n 111 ASN 111 A ALA 112 n 112 ALA 112 A ALA 113 n 113 ALA 113 A GLY 114 n 114 GLY 114 A LYS 115 n 115 LYS 115 A ALA 116 n 116 ALA 116 A ALA 117 n 117 ALA 117 A ALA 118 n 118 ALA 118 A TRP 119 n 119 TRP 119 A VAL 120 n 120 VAL 120 A GLN 121 n 121 GLN 121 A ARG 122 n 122 ARG 122 A ILE 123 n 123 ILE 123 A GLU 124 n 124 GLU 124 A PHE 125 n 125 PHE 125 A ALA 126 n 126 ALA 126 A ARG 127 n 127 ARG 127 A LEU 128 n 128 LEU 128 A GLY 129 n 129 GLY 129 A LEU 130 n 130 LEU 130 A PRO 131 n 131 PRO 131 A LYS 132 n 132 LYS 132 A PRO 133 n 133 PRO 133 A ASP 134 n 134 ASP 134 A TRP 135 n 135 TRP 135 A GLN 136 n 136 GLN 136 A VAL 137 n 137 VAL 137 A LEU 138 n 138 LEU 138 A LEU 139 n 139 LEU 139 A ALA 140 n 140 ALA 140 A VAL 141 n 141 VAL 141 A SER 142 n 142 SER 142 A ALA 143 n 143 ALA 143 A ALA 144 n 144 GLU 144 A ALA 145 n 145 LEU 145 A ALA 146 n 146 ALA 146 A GLY 147 n 147 GLY 147 A GLU 148 n 148 GLU 148 A ARG 149 n 149 ARG 149 A SER 150 n 150 SER 150 A ARG 151 n 151 ARG 151 A GLY 152 n 152 GLY 152 A ARG 153 n 153 ARG 153 A ALA 154 n 154 ALA 154 A GLN 155 n 155 GLN 155 A ARG 156 n 156 ARG 156 A ASP 157 n 157 ASP 157 A PRO 158 n 158 PRO 158 A GLY 159 n 159 GLY 159 A ARG 160 n 160 ARG 160 A ALA 161 n 161 ALA 161 A ARG 162 n 162 ARG 162 A ASP 163 n 163 ASP 163 A ASN 164 n 164 ASN 164 A TYR 165 n 165 TYR 165 A GLU 166 n 166 GLU 166 A ARG 167 n 167 ARG 167 A ASP 168 n 168 ASP 168 A ALA 169 n 169 ALA 169 A GLU 170 n 170 GLU 170 A LEU 171 n 171 LEU 171 A GLN 172 n 172 GLN 172 A GLN 173 n 173 GLN 173 A ARG 174 n 174 ARG 174 A THR 175 n 175 THR 175 A GLY 176 n 176 GLY 176 A ALA 177 n 177 ALA 177 A VAL 178 n 178 VAL 178 A TYR 179 n 179 TYR 179 A ALA 180 n 180 ALA 180 A GLU 181 n 181 GLU 181 A LEU 182 n 182 LEU 182 A ALA 183 n 183 ALA 183 A ALA 184 n 184 ALA 184 A GLN 185 n 185 GLN 185 A GLY 186 n 186 GLY 186 A TRP 187 n 187 TRP 187 A GLY 188 n 188 GLY 188 A GLY 189 n 189 GLY 189 A ARG 190 n 190 ARG 190 A TRP 191 n 191 TRP 191 A LEU 192 n 192 LEU 192 A VAL 193 n 193 VAL 193 A VAL 194 n 194 VAL 194 A GLY 195 n 195 GLY 195 A ALA 196 n 196 ALA 196 A ASP 197 n 197 ASP 197 A VAL 198 n 198 VAL 198 A ASP 199 n 199 ASP 199 A PRO 200 n 200 PRO 200 A GLY 201 n 201 GLY 201 A ARG 202 n 202 ARG 202 A LEU 203 n 203 LEU 203 A ALA 204 n 204 ALA 204 A ALA 205 n 205 ALA 205 A THR 206 n 206 THR 206 A LEU 207 n 207 LEU 207 A ALA 208 n 208 ALA 208 A n 209 209 A n 210 210 A n 211 211 A n 212 212 A n 213 213 A n 214 214 A author_defined_assembly 2 dimeric A ASP 9 A OD1 ASP 9 1_555 A MG 300 D MG MG 1_555 A GLU 166 A OE2 GLU 166 1_555 107.8 A ASP 9 A OD1 ASP 9 1_555 A MG 300 D MG MG 1_555 A T5A 301 E O1B T5A 1_555 166.2 A GLU 166 A OE2 GLU 166 1_555 A MG 300 D MG MG 1_555 A T5A 301 E O1B T5A 1_555 71.9 A ASP 9 A OD1 ASP 9 1_555 A MG 300 D MG MG 1_555 A T5A 301 E O2A T5A 1_555 70.8 A GLU 166 A OE2 GLU 166 1_555 A MG 300 D MG MG 1_555 A T5A 301 E O2A T5A 1_555 167.7 A T5A 301 E O1B T5A 1_555 A MG 300 D MG MG 1_555 A T5A 301 E O2A T5A 1_555 106.4 A ASP 9 A OD1 ASP 9 1_555 A MG 300 D MG MG 1_555 A T5A 301 E O3A T5A 1_555 115.9 A GLU 166 A OE2 GLU 166 1_555 A MG 300 D MG MG 1_555 A T5A 301 E O3A T5A 1_555 131.9 A T5A 301 E O1B T5A 1_555 A MG 300 D MG MG 1_555 A T5A 301 E O3A T5A 1_555 60.8 A T5A 301 E O2A T5A 1_555 A MG 300 D MG MG 1_555 A T5A 301 E O3A T5A 1_555 45.7 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 8_555 x-y,-y,-z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 A N ALA 32 A N ALA 32 A O ILE 92 A O ILE 92 A O LEU 93 A O LEU 93 A N ILE 5 A N ILE 5 A N GLU 6 A N GLU 6 A O VAL 137 A O VAL 137 A N GLN 136 A N GLN 136 A O LEU 192 A O LEU 192 1 A CG ARG 86 A CG ARG 86 1 Y 1 A CD ARG 86 A CD ARG 86 1 Y 1 A NE ARG 86 A NE ARG 86 1 Y 1 A CZ ARG 86 A CZ ARG 86 1 Y 1 A NH1 ARG 86 A NH1 ARG 86 1 Y 1 A NH2 ARG 86 A NH2 ARG 86 1 Y 1 A CG GLU 144 A CG GLU 144 1 Y 1 A CD GLU 144 A CD GLU 144 1 Y 1 A OE1 GLU 144 A OE1 GLU 144 1 Y 1 A OE2 GLU 144 A OE2 GLU 144 1 Y 1 A CG LEU 145 A CG LEU 145 1 Y 1 A CD1 LEU 145 A CD1 LEU 145 1 Y 1 A CD2 LEU 145 A CD2 LEU 145 1 Y 1 A PRO 209 A PRO 209 1 Y 1 A PRO 210 A PRO 210 1 Y 1 A ASP 211 A ASP 211 1 Y 1 A VAL 212 A VAL 212 1 Y 1 A PRO 213 A PRO 213 1 Y 1 A SER 214 A SER 214 1 Y 1 A A NH1 NH1 ARG ARG 14 14 1.72 1_555 10_665 1 A A O O HOH HOH 314 314 2.00 1_555 10_665 1 A VAL 8 -58.35 174.53 1 A ALA 27 -140.61 25.25 1 A HIS 56 61.12 61.33 1 A ARG 95 82.13 138.42 1 A TYR 96 -146.23 -147.76 1 A LEU 139 -69.05 87.03 1 A ALA 161 171.60 144.18 1 A VAL 194 -98.71 -142.48 38.0822 0.284 0.236 0.239 0.239 2.45 30.0 379 8139 8139 5.000 92.6 RANDOM 1 isotropic THROUGHOUT 0.1 0.00 MOLECULAR REPLACEMENT PDB ENTRY 1G3U Engh & Huber 42.56 0.359 0.44 0.33 5.00 0.36 0.32 2.45 30.0 58 1666 66 0 1542 0.007885 1.20634 20.08821 0.76103 0.2864 0.3076 2.54 23 688 688 10 5 2.45 30.0 1MRN 8407 8407 0.00 0.00 0.066 0.066 1 10.2 3.3 92.6 0.366 2.45 2.54 9.2 0.366 3.0 90.1 data reduction DENZO data scaling SCALEPACK refinement CNS phasing CNS CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS THYMIDYLATE KINASE COMPLEXED WITH BISUBSTRATE INHIBITOR (TP5A) 1 N N 2 N N 2 N N 3 N N 4 N N 5 N N The molecule is normally a dimer in solution. The other monomer (B) can be generated by applying the transformation X, -Y, -Z to molecule A. A GLY 12 A GLY 12 HELX_P A ALA 26 A ALA 26 1 1 15 A SER 42 A SER 42 HELX_P A HIS 53 A HIS 53 1 2 12 A ASP 58 A ASP 58 HELX_P A SER 61 A SER 61 5 3 4 A SER 62 A SER 62 HELX_P A GLY 76 A GLY 76 1 4 15 A ALA 77 A ALA 77 HELX_P A TYR 88 A TYR 88 1 5 12 A TYR 96 A TYR 96 HELX_P A LEU 108 A LEU 108 1 6 13 A GLY 114 A GLY 114 HELX_P A PHE 125 A PHE 125 1 7 12 A SER 142 A SER 142 HELX_P A ASP 157 A ASP 157 1 8 16 A ASP 163 A ASP 163 HELX_P A ASP 168 A ASP 168 1 9 6 A ASP 168 A ASP 168 HELX_P A GLN 185 A GLN 185 1 10 18 A ASP 199 A ASP 199 HELX_P A LEU 207 A LEU 207 1 11 9 metalc 1.972 A ASP 9 A OD1 ASP 9 1_555 A MG 300 D MG MG 1_555 metalc 2.322 A GLU 166 A OE2 GLU 166 1_555 A MG 300 D MG MG 1_555 metalc 2.650 A MG 300 D MG MG 1_555 A T5A 301 E O1B T5A 1_555 metalc 2.932 A MG 300 D MG MG 1_555 A T5A 301 E O2A T5A 1_555 metalc 2.363 A MG 300 D MG MG 1_555 A T5A 301 E O3A T5A 1_555 TRANSFERASE TRANSFERASE (ATP:TMP PHOSPHOTRANSFERASE), KINASE, TRANSFERASE A PHE 36 A PHE 36 1 A PRO 37 A PRO 37 1.13 KTHY_MYCTU UNP 1 1 O05891 MLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLASSVYAMATLFALDRAGAVHT IQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGR ARDNYERDAELQQRTGAVYAELAAQGWGGRWLVVGADVDPGRLAATLAPPDVPS 1 214 1MRN 1 214 O05891 A 1 1 214 5 parallel parallel parallel parallel A VAL 31 A VAL 31 A ALA 35 A ALA 35 A VAL 90 A VAL 90 A ASP 94 A ASP 94 A LEU 2 A LEU 2 A GLU 6 A GLU 6 A TRP 135 A TRP 135 A LEU 138 A LEU 138 A ARG 190 A ARG 190 A VAL 193 A VAL 193 BINDING SITE FOR RESIDUE SO4 A 219 A SO4 219 Software 10 BINDING SITE FOR RESIDUE SO4 A 220 A SO4 220 Software 7 BINDING SITE FOR RESIDUE MG A 300 A MG 300 Software 3 BINDING SITE FOR RESIDUE T5A A 301 A T5A 301 Software 27 A GLN 121 A GLN 121 10 6_554 A LYS 132 A LYS 132 10 6_554 A ALA 154 A ALA 154 10 1_555 A GLN 155 A GLN 155 10 1_555 A ALA 161 A ALA 161 10 1_555 A ARG 162 A ARG 162 10 1_555 A ARG 167 A ARG 167 10 1_555 A TRP 187 A TRP 187 10 6_554 A GLY 188 A GLY 188 10 6_554 A HOH 311 F HOH 10 1_555 A GLY 10 A GLY 10 7 1_555 A ALA 11 A ALA 11 7 1_555 A GLY 12 A GLY 12 7 1_555 A LYS 13 A LYS 13 7 1_555 A ARG 14 A ARG 14 7 1_555 A ARG 153 A ARG 153 7 1_555 A HOH 306 F HOH 7 1_555 A ASP 9 A ASP 9 3 1_555 A GLU 166 A GLU 166 3 1_555 A T5A 301 E T5A 3 1_555 A ASP 9 A ASP 9 27 1_555 A PRO 37 A PRO 37 27 1_555 A TYR 39 A TYR 39 27 1_555 A ALA 49 A ALA 49 27 1_555 A GLU 50 A GLU 50 27 1_555 A HIS 53 A HIS 53 27 1_555 A GLU 55 A GLU 55 27 1_555 A PHE 70 A PHE 70 27 1_555 A ARG 74 A ARG 74 27 1_555 A ARG 95 A ARG 95 27 1_555 A SER 99 A SER 99 27 1_555 A ASN 100 A ASN 100 27 1_555 A TYR 103 A TYR 103 27 1_555 A ARG 122 A ARG 122 27 6_554 A ARG 160 A ARG 160 27 1_555 A ASP 163 A ASP 163 27 1_555 A TYR 165 A TYR 165 27 1_555 A GLU 166 A GLU 166 27 1_555 A MG 300 D MG 27 1_555 A HOH 306 F HOH 27 1_555 A HOH 309 F HOH 27 1_555 A HOH 318 F HOH 27 1_555 A HOH 328 F HOH 27 6_554 A HOH 329 F HOH 27 1_555 A HOH 331 F HOH 27 1_555 A HOH 334 F HOH 27 1_555 A HOH 359 F HOH 27 1_555 179 P 65 2 2