.009011
.005203
.000000
.000000
.010405
.000000
.000000
.000000
.010411
.00000
.00000
.00000
Jacobs, S.A.
Harp, J.M.
Devarakonda, S.
Kim, Y.
Rastinejad, F.
Khorasanizadeh, S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
110.973
110.973
96.050
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Nat.Struct.Biol.
NSBIEW
2024
1072-8368
9
833
838
12389038
The active site of the SET domain is constructed on a knot
2002
1.000000
.000000
.000000
.000000
1.000000
.000000
.000000
.000000
1.000000
.00000
.00000
.00000
100
1
mirrors
CCD
2002-08-18
SBC-2
double crystal Si 111
MAD
M
x-ray
1
0.95372
1.0
0.9791
1.0
0.97921
1.0
19-ID
APS
0.95372,0.9791,0.97921
SYNCHROTRON
APS BEAMLINE 19-ID
28936.219
SET9
2.1.1.43
1
man
polymer
18.015
water
141
nat
water
histone H3 lysine 4 specific methyltransferase, SET7/9
no
yes
VLQGTYVDGELNGPAQEYDTDGRLIFKGQYKDNIRHGVCWIYYPDGGSLVGEVNEDGE(MSE)TGEKIAYVYPDERTALY
GKFIDGE(MSE)IEGKLATL(MSE)STEEGRPHFEL(MSE)PGNSVYHFDKSTSSCISTNALLPDPYESERVYVAESLIS
SAGEGLFSKVAVGPNTV(MSE)SFYNGVRITHQEVDSRDWALNGNTLSLDEETVIDVPEPYNHVSKYCASLGHKANHSFT
PNCIYD(MSE)FVHPRFGPIKCIRTLRAVEADEELTVAYGY
VLQGTYVDGELNGPAQEYDTDGRLIFKGQYKDNIRHGVCWIYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFI
DGEMIEGKLATLMSTEEGRPHFELMPGNSVYHFDKSTSSCISTNALLPDPYESERVYVAESLISSAGEGLFSKVAVGPNT
VMSFYNGVRITHQEVDSRDWALNGNTLSLDEETVIDVPEPYNHVSKYCASLGHKANHSFTPNCIYDMFVHPRFGPIKCIR
TLRAVEADEELTVAYGY
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
Escherichia coli
sample
9606
Homo sapiens
469008
Escherichia coli BL21(DE3)
BL21(DE3)
Plasmid
PGex
1
2.95
58.29
VAPOR DIFFUSION, HANGING DROP
7.0
PEG 3000, CaCl2, DTT, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 283K
283
repository
Initial release
Version format compliance
Version format compliance
Atomic model
1
0
2002-11-06
1
1
2008-04-28
1
2
2011-07-13
1
3
2011-11-16
Structure of the histone H3 K4-specific methyltransferase SET7/9 with AdoHcy
RCSB
Y
RCSB
2002-09-23
REL
REL
HOH
water
HOH
1
2
HOH
HOH
338
A
HOH
2
2
HOH
HOH
339
A
HOH
3
2
HOH
HOH
340
A
HOH
4
2
HOH
HOH
341
A
HOH
5
2
HOH
HOH
342
A
HOH
6
2
HOH
HOH
343
A
HOH
7
2
HOH
HOH
344
A
HOH
8
2
HOH
HOH
345
A
HOH
9
2
HOH
HOH
346
A
HOH
10
2
HOH
HOH
347
A
HOH
11
2
HOH
HOH
348
A
HOH
12
2
HOH
HOH
349
A
HOH
13
2
HOH
HOH
350
A
HOH
14
2
HOH
HOH
351
A
HOH
15
2
HOH
HOH
352
A
HOH
16
2
HOH
HOH
353
A
HOH
17
2
HOH
HOH
354
A
HOH
18
2
HOH
HOH
355
A
HOH
19
2
HOH
HOH
356
A
HOH
20
2
HOH
HOH
357
A
HOH
21
2
HOH
HOH
358
A
HOH
22
2
HOH
HOH
359
A
HOH
23
2
HOH
HOH
360
A
HOH
24
2
HOH
HOH
361
A
HOH
25
2
HOH
HOH
362
A
HOH
26
2
HOH
HOH
363
A
HOH
27
2
HOH
HOH
364
A
HOH
28
2
HOH
HOH
365
A
HOH
29
2
HOH
HOH
366
A
HOH
30
2
HOH
HOH
367
A
HOH
31
2
HOH
HOH
368
A
HOH
32
2
HOH
HOH
369
A
HOH
33
2
HOH
HOH
370
A
HOH
34
2
HOH
HOH
371
A
HOH
35
2
HOH
HOH
372
A
HOH
36
2
HOH
HOH
373
A
HOH
37
2
HOH
HOH
374
A
HOH
38
2
HOH
HOH
375
A
HOH
39
2
HOH
HOH
376
A
HOH
40
2
HOH
HOH
377
A
HOH
41
2
HOH
HOH
378
A
HOH
42
2
HOH
HOH
379
A
HOH
43
2
HOH
HOH
380
A
HOH
44
2
HOH
HOH
381
A
HOH
45
2
HOH
HOH
382
A
HOH
46
2
HOH
HOH
383
A
HOH
47
2
HOH
HOH
384
A
HOH
48
2
HOH
HOH
385
A
HOH
49
2
HOH
HOH
386
A
HOH
50
2
HOH
HOH
387
A
HOH
51
2
HOH
HOH
388
A
HOH
52
2
HOH
HOH
389
A
HOH
53
2
HOH
HOH
390
A
HOH
54
2
HOH
HOH
391
A
HOH
55
2
HOH
HOH
392
A
HOH
56
2
HOH
HOH
393
A
HOH
57
2
HOH
HOH
394
A
HOH
58
2
HOH
HOH
395
A
HOH
59
2
HOH
HOH
396
A
HOH
60
2
HOH
HOH
397
A
HOH
61
2
HOH
HOH
398
A
HOH
62
2
HOH
HOH
399
A
HOH
63
2
HOH
HOH
400
A
HOH
64
2
HOH
HOH
401
A
HOH
65
2
HOH
HOH
402
A
HOH
66
2
HOH
HOH
403
A
HOH
67
2
HOH
HOH
404
A
HOH
68
2
HOH
HOH
405
A
HOH
69
2
HOH
HOH
406
A
HOH
70
2
HOH
HOH
407
A
HOH
71
2
HOH
HOH
408
A
HOH
72
2
HOH
HOH
409
A
HOH
73
2
HOH
HOH
410
A
HOH
74
2
HOH
HOH
411
A
HOH
75
2
HOH
HOH
412
A
HOH
76
2
HOH
HOH
413
A
HOH
77
2
HOH
HOH
414
A
HOH
78
2
HOH
HOH
415
A
HOH
79
2
HOH
HOH
416
A
HOH
80
2
HOH
HOH
417
A
HOH
81
2
HOH
HOH
418
A
HOH
82
2
HOH
HOH
419
A
HOH
83
2
HOH
HOH
420
A
HOH
84
2
HOH
HOH
421
A
HOH
85
2
HOH
HOH
422
A
HOH
86
2
HOH
HOH
423
A
HOH
87
2
HOH
HOH
424
A
HOH
88
2
HOH
HOH
425
A
HOH
89
2
HOH
HOH
426
A
HOH
90
2
HOH
HOH
427
A
HOH
91
2
HOH
HOH
428
A
HOH
92
2
HOH
HOH
429
A
HOH
93
2
HOH
HOH
430
A
HOH
94
2
HOH
HOH
431
A
HOH
95
2
HOH
HOH
432
A
HOH
96
2
HOH
HOH
433
A
HOH
97
2
HOH
HOH
434
A
HOH
98
2
HOH
HOH
435
A
HOH
99
2
HOH
HOH
436
A
HOH
100
2
HOH
HOH
437
A
HOH
101
2
HOH
HOH
438
A
HOH
102
2
HOH
HOH
439
A
HOH
103
2
HOH
HOH
440
A
HOH
104
2
HOH
HOH
441
A
HOH
105
2
HOH
HOH
442
A
HOH
106
2
HOH
HOH
443
A
HOH
107
2
HOH
HOH
444
A
HOH
108
2
HOH
HOH
445
A
HOH
109
2
HOH
HOH
446
A
HOH
110
2
HOH
HOH
447
A
HOH
111
2
HOH
HOH
448
A
HOH
112
2
HOH
HOH
449
A
HOH
113
2
HOH
HOH
450
A
HOH
114
2
HOH
HOH
451
A
HOH
115
2
HOH
HOH
452
A
HOH
116
2
HOH
HOH
453
A
HOH
117
2
HOH
HOH
454
A
HOH
118
2
HOH
HOH
455
A
HOH
119
2
HOH
HOH
456
A
HOH
120
2
HOH
HOH
457
A
HOH
121
2
HOH
HOH
458
A
HOH
122
2
HOH
HOH
459
A
HOH
123
2
HOH
HOH
460
A
HOH
124
2
HOH
HOH
461
A
HOH
125
2
HOH
HOH
462
A
HOH
126
2
HOH
HOH
463
A
HOH
127
2
HOH
HOH
464
A
HOH
128
2
HOH
HOH
465
A
HOH
129
2
HOH
HOH
466
A
HOH
130
2
HOH
HOH
467
A
HOH
131
2
HOH
HOH
468
A
HOH
132
2
HOH
HOH
469
A
HOH
133
2
HOH
HOH
470
A
HOH
134
2
HOH
HOH
471
A
HOH
135
2
HOH
HOH
472
A
HOH
136
2
HOH
HOH
473
A
HOH
137
2
HOH
HOH
474
A
HOH
138
2
HOH
HOH
475
A
HOH
139
2
HOH
HOH
476
A
HOH
140
2
HOH
HOH
477
A
HOH
141
2
HOH
HOH
478
A
VAL
81
n
1
VAL
81
A
LEU
82
n
2
LEU
82
A
GLN
83
n
3
GLN
83
A
GLY
84
n
4
GLY
84
A
THR
85
n
5
THR
85
A
TYR
86
n
6
TYR
86
A
VAL
87
n
7
VAL
87
A
ASP
88
n
8
ASP
88
A
GLY
89
n
9
GLY
89
A
GLU
90
n
10
GLU
90
A
LEU
91
n
11
LEU
91
A
ASN
92
n
12
ASN
92
A
GLY
93
n
13
GLY
93
A
PRO
94
n
14
PRO
94
A
ALA
95
n
15
ALA
95
A
GLN
96
n
16
GLN
96
A
GLU
97
n
17
GLU
97
A
TYR
98
n
18
TYR
98
A
ASP
99
n
19
ASP
99
A
THR
100
n
20
THR
100
A
ASP
101
n
21
ASP
101
A
GLY
102
n
22
GLY
102
A
ARG
103
n
23
ARG
103
A
LEU
104
n
24
LEU
104
A
ILE
105
n
25
ILE
105
A
PHE
106
n
26
PHE
106
A
LYS
107
n
27
LYS
107
A
GLY
108
n
28
GLY
108
A
GLN
109
n
29
GLN
109
A
TYR
110
n
30
TYR
110
A
LYS
111
n
31
LYS
111
A
ASP
112
n
32
ASP
112
A
ASN
113
n
33
ASN
113
A
ILE
114
n
34
ILE
114
A
ARG
115
n
35
ARG
115
A
HIS
116
n
36
HIS
116
A
GLY
117
n
37
GLY
117
A
VAL
118
n
38
VAL
118
A
CYS
119
n
39
CYS
119
A
TRP
120
n
40
TRP
120
A
ILE
121
n
41
ILE
121
A
TYR
122
n
42
TYR
122
A
TYR
123
n
43
TYR
123
A
PRO
124
n
44
PRO
124
A
ASP
125
n
45
ASP
125
A
GLY
126
n
46
GLY
126
A
GLY
127
n
47
GLY
127
A
SER
128
n
48
SER
128
A
LEU
129
n
49
LEU
129
A
VAL
130
n
50
VAL
130
A
GLY
131
n
51
GLY
131
A
GLU
132
n
52
GLU
132
A
VAL
133
n
53
VAL
133
A
ASN
134
n
54
ASN
134
A
GLU
135
n
55
GLU
135
A
ASP
136
n
56
ASP
136
A
GLY
137
n
57
GLY
137
A
GLU
138
n
58
GLU
138
A
MSE
139
n
59
MSE
139
A
THR
140
n
60
THR
140
A
GLY
141
n
61
GLY
141
A
GLU
142
n
62
GLU
142
A
LYS
143
n
63
LYS
143
A
ILE
144
n
64
ILE
144
A
ALA
145
n
65
ALA
145
A
TYR
146
n
66
TYR
146
A
VAL
147
n
67
VAL
147
A
TYR
148
n
68
TYR
148
A
PRO
149
n
69
PRO
149
A
ASP
150
n
70
ASP
150
A
GLU
151
n
71
GLU
151
A
ARG
152
n
72
ARG
152
A
THR
153
n
73
THR
153
A
ALA
154
n
74
ALA
154
A
LEU
155
n
75
LEU
155
A
TYR
156
n
76
TYR
156
A
GLY
157
n
77
GLY
157
A
LYS
158
n
78
LYS
158
A
PHE
159
n
79
PHE
159
A
ILE
160
n
80
ILE
160
A
ASP
161
n
81
ASP
161
A
GLY
162
n
82
GLY
162
A
GLU
163
n
83
GLU
163
A
MSE
164
n
84
MSE
164
A
ILE
165
n
85
ILE
165
A
GLU
166
n
86
GLU
166
A
GLY
167
n
87
GLY
167
A
LYS
168
n
88
LYS
168
A
LEU
169
n
89
LEU
169
A
ALA
170
n
90
ALA
170
A
THR
171
n
91
THR
171
A
LEU
172
n
92
LEU
172
A
MSE
173
n
93
MSE
173
A
SER
174
n
94
SER
174
A
THR
175
n
95
THR
175
A
GLU
176
n
96
GLU
176
A
GLU
177
n
97
GLU
177
A
GLY
178
n
98
GLY
178
A
ARG
179
n
99
ARG
179
A
PRO
180
n
100
PRO
180
A
HIS
181
n
101
HIS
181
A
PHE
182
n
102
PHE
182
A
GLU
183
n
103
GLU
183
A
LEU
184
n
104
LEU
184
A
MSE
185
n
105
MSE
185
A
PRO
186
n
106
PRO
186
A
GLY
187
n
107
GLY
187
A
ASN
188
n
108
ASN
188
A
SER
189
n
109
SER
189
A
VAL
190
n
110
VAL
190
A
TYR
191
n
111
TYR
191
A
HIS
192
n
112
HIS
192
A
PHE
193
n
113
PHE
193
A
ASP
194
n
114
ASP
194
A
LYS
195
n
115
LYS
195
A
SER
196
n
116
SER
196
A
THR
197
n
117
THR
197
A
SER
198
n
118
SER
198
A
SER
199
n
119
SER
199
A
CYS
200
n
120
CYS
200
A
ILE
201
n
121
ILE
201
A
SER
202
n
122
SER
202
A
THR
203
n
123
THR
203
A
ASN
204
n
124
ASN
204
A
ALA
205
n
125
ALA
205
A
LEU
206
n
126
LEU
206
A
LEU
207
n
127
LEU
207
A
PRO
208
n
128
PRO
208
A
ASP
209
n
129
ASP
209
A
PRO
210
n
130
PRO
210
A
TYR
211
n
131
TYR
211
A
GLU
212
n
132
GLU
212
A
SER
213
n
133
SER
213
A
GLU
214
n
134
GLU
214
A
ARG
215
n
135
ARG
215
A
VAL
216
n
136
VAL
216
A
TYR
217
n
137
TYR
217
A
VAL
218
n
138
VAL
218
A
ALA
219
n
139
ALA
219
A
GLU
220
n
140
GLU
220
A
SER
221
n
141
SER
221
A
LEU
222
n
142
LEU
222
A
ILE
223
n
143
ILE
223
A
SER
224
n
144
SER
224
A
SER
225
n
145
SER
225
A
ALA
226
n
146
ALA
226
A
GLY
227
n
147
GLY
227
A
GLU
228
n
148
GLU
228
A
GLY
229
n
149
GLY
229
A
LEU
230
n
150
LEU
230
A
PHE
231
n
151
PHE
231
A
SER
232
n
152
SER
232
A
LYS
233
n
153
LYS
233
A
VAL
234
n
154
VAL
234
A
ALA
235
n
155
ALA
235
A
VAL
236
n
156
VAL
236
A
GLY
237
n
157
GLY
237
A
PRO
238
n
158
PRO
238
A
ASN
239
n
159
ASN
239
A
THR
240
n
160
THR
240
A
VAL
241
n
161
VAL
241
A
MSE
242
n
162
MSE
242
A
SER
243
n
163
SER
243
A
PHE
244
n
164
PHE
244
A
TYR
245
n
165
TYR
245
A
ASN
246
n
166
ASN
246
A
GLY
247
n
167
GLY
247
A
VAL
248
n
168
VAL
248
A
ARG
249
n
169
ARG
249
A
ILE
250
n
170
ILE
250
A
THR
251
n
171
THR
251
A
HIS
252
n
172
HIS
252
A
GLN
253
n
173
GLN
253
A
GLU
254
n
174
GLU
254
A
VAL
255
n
175
VAL
255
A
ASP
256
n
176
ASP
256
A
SER
257
n
177
SER
257
A
ARG
258
n
178
ARG
258
A
ASP
259
n
179
ASP
259
A
TRP
260
n
180
TRP
260
A
ALA
261
n
181
ALA
261
A
LEU
262
n
182
LEU
262
A
ASN
263
n
183
ASN
263
A
GLY
264
n
184
GLY
264
A
ASN
265
n
185
ASN
265
A
THR
266
n
186
THR
266
A
LEU
267
n
187
LEU
267
A
SER
268
n
188
SER
268
A
LEU
269
n
189
LEU
269
A
ASP
270
n
190
ASP
270
A
GLU
271
n
191
GLU
271
A
GLU
272
n
192
GLU
272
A
THR
273
n
193
THR
273
A
VAL
274
n
194
VAL
274
A
ILE
275
n
195
ILE
275
A
ASP
276
n
196
ASP
276
A
VAL
277
n
197
VAL
277
A
PRO
278
n
198
PRO
278
A
GLU
279
n
199
GLU
279
A
PRO
280
n
200
PRO
280
A
TYR
281
n
201
TYR
281
A
ASN
282
n
202
ASN
282
A
HIS
283
n
203
HIS
283
A
VAL
284
n
204
VAL
284
A
SER
285
n
205
SER
285
A
LYS
286
n
206
LYS
286
A
TYR
287
n
207
TYR
287
A
CYS
288
n
208
CYS
288
A
ALA
289
n
209
ALA
289
A
SER
290
n
210
SER
290
A
LEU
291
n
211
LEU
291
A
GLY
292
n
212
GLY
292
A
HIS
293
n
213
HIS
293
A
LYS
294
n
214
LYS
294
A
ALA
295
n
215
ALA
295
A
ASN
296
n
216
ASN
296
A
HIS
297
n
217
HIS
297
A
SER
298
n
218
SER
298
A
PHE
299
n
219
PHE
299
A
THR
300
n
220
THR
300
A
PRO
301
n
221
PRO
301
A
ASN
302
n
222
ASN
302
A
CYS
303
n
223
CYS
303
A
ILE
304
n
224
ILE
304
A
TYR
305
n
225
TYR
305
A
ASP
306
n
226
ASP
306
A
MSE
307
n
227
MSE
307
A
PHE
308
n
228
PHE
308
A
VAL
309
n
229
VAL
309
A
HIS
310
n
230
HIS
310
A
PRO
311
n
231
PRO
311
A
ARG
312
n
232
ARG
312
A
PHE
313
n
233
PHE
313
A
GLY
314
n
234
GLY
314
A
PRO
315
n
235
PRO
315
A
ILE
316
n
236
ILE
316
A
LYS
317
n
237
LYS
317
A
CYS
318
n
238
CYS
318
A
ILE
319
n
239
ILE
319
A
ARG
320
n
240
ARG
320
A
THR
321
n
241
THR
321
A
LEU
322
n
242
LEU
322
A
ARG
323
n
243
ARG
323
A
ALA
324
n
244
ALA
324
A
VAL
325
n
245
VAL
325
A
GLU
326
n
246
GLU
326
A
ALA
327
n
247
ALA
327
A
ASP
328
n
248
ASP
328
A
GLU
329
n
249
GLU
329
A
GLU
330
n
250
GLU
330
A
LEU
331
n
251
LEU
331
A
THR
332
n
252
THR
332
A
VAL
333
n
253
VAL
333
A
ALA
334
n
254
ALA
334
A
TYR
335
n
255
TYR
335
A
GLY
336
n
256
GLY
336
A
TYR
337
n
257
TYR
337
A
author_defined_assembly
1
monomeric
A
MSE
139
SELENOMETHIONINE
A
MSE
59
MET
A
MSE
164
SELENOMETHIONINE
A
MSE
84
MET
A
MSE
173
SELENOMETHIONINE
A
MSE
93
MET
A
MSE
185
SELENOMETHIONINE
A
MSE
105
MET
A
MSE
242
SELENOMETHIONINE
A
MSE
162
MET
A
MSE
307
SELENOMETHIONINE
A
MSE
227
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLN
83
A
N
GLN
3
A
O
GLN
96
A
O
GLN
16
A
N
GLU
97
A
N
GLU
17
A
O
ILE
105
A
O
ILE
25
A
N
LYS
107
A
N
LYS
27
A
O
TRP
120
A
O
TRP
40
A
N
ILE
121
A
N
ILE
41
A
O
LEU
129
A
O
LEU
49
A
N
SER
128
A
N
SER
48
A
O
VAL
147
A
O
VAL
67
A
N
ILE
144
A
N
ILE
64
A
O
GLY
157
A
O
GLY
77
A
N
TYR
156
A
N
TYR
76
A
O
LYS
168
A
O
LYS
88
A
N
THR
171
A
N
THR
91
A
O
GLU
183
A
O
GLU
103
A
N
GLN
83
A
N
GLN
3
A
O
GLN
96
A
O
GLN
16
A
N
GLU
97
A
N
GLU
17
A
O
ILE
105
A
O
ILE
25
A
N
LYS
107
A
N
LYS
27
A
O
TRP
120
A
O
TRP
40
A
N
ILE
121
A
N
ILE
41
A
O
LEU
129
A
O
LEU
49
A
N
SER
128
A
N
SER
48
A
O
VAL
147
A
O
VAL
67
A
N
ILE
144
A
N
ILE
64
A
O
GLY
157
A
O
GLY
77
A
N
TYR
156
A
N
TYR
76
A
O
LYS
168
A
O
LYS
88
A
N
GLY
167
A
N
GLY
87
A
O
TYR
191
A
O
TYR
111
A
N
ALA
219
A
N
ALA
139
A
O
GLY
229
A
O
GLY
149
A
N
LEU
230
A
N
LEU
150
A
O
LEU
331
A
O
LEU
251
A
O
VAL
333
A
O
VAL
253
A
N
ASN
296
A
N
ASN
216
A
N
TYR
245
A
N
TYR
165
A
O
LYS
317
A
O
LYS
237
A
O
CYS
318
A
O
CYS
238
A
N
ASP
306
A
N
ASP
226
A
N
ILE
250
A
N
ILE
170
A
O
VAL
274
A
O
VAL
194
A
O
ILE
275
A
O
ILE
195
A
N
LEU
267
A
N
LEU
187
1
A
HOH
454
B
HOH
1
16.95
2.70
111.00
127.95
A
A
A
N
CA
C
ARG
ARG
ARG
179
179
179
N
1
20.17
2.70
111.00
131.17
A
A
A
N
CA
C
ASP
ASP
ASP
259
259
259
N
1
A
ARG
152
-131.07
-54.67
1
A
GLU
177
63.52
-130.91
1
A
ASP
194
-148.41
58.49
1
A
THR
197
-124.29
-169.59
1
A
SER
202
-175.18
147.92
1
A
SER
257
-77.78
-113.68
1
A
ARG
258
-48.74
175.54
1
A
TRP
260
-5.57
-54.54
1
A
PRO
278
-96.14
-151.49
1
A
GLU
279
36.44
-118.28
1
A
CYS
288
-140.14
22.35
1
A
ILE
316
-138.99
-159.28
PROTEIN_REP.PARAM
PROTEIN.TOP
WATER.PARAM
WATER.TOP
34.2
2.10
2.87
0.00
2.10
0.00
-4.20
0.2490000
0.008
0.2290000
0.2290000
0.2290000
2.26
19.22
848
16789
16789
5.1
99.8
RANDOM
1918515.97
1918515.97
0.000000
1
RESTRAINED
THROUGHOUT
0.00
MAD
Engh & Huber
FLAT MODEL
49.7807
0.349385
0.33
0.28
5.00
0.26
0.21
2.26
19.22
141
2151
0
0
2010
0.011
1.8
27.8
1.13
1.58
1.50
2.62
2.00
2.66
2.00
3.93
2.50
0.3040000
0.035
0.2710000
2.34
73
1473
1546
6
4.7
52.0
27.4
2.26
19.22
1MUF
16789
16789
0.0
0.0
1
99.8
2.26
2.34
52.0
data collection
HKL-2000
data scaling
SCALEPACK
phasing
SOLVE
model building
RESOLVE
refinement
CNS
1.1
data reduction
HKL-2000
phasing
RESOLVE
SET9 (2.1.1.43)
Structure of histone H3 K4-specific methyltransferase SET7/9
1
N
N
2
N
N
A
ASP
209
A
ASP
129
HELX_P
A
GLU
214
A
GLU
134
1
1
6
A
THR
251
A
THR
171
HELX_P
A
SER
257
A
SER
177
1
2
7
A
ASP
259
A
ASP
179
HELX_P
A
ASN
263
A
ASN
183
5
3
5
A
LEU
291
A
LEU
211
HELX_P
A
ALA
295
A
ALA
215
5
4
5
covale
1.335
A
GLU
138
A
C
GLU
58
1_555
A
MSE
139
A
N
MSE
59
1_555
covale
1.325
A
MSE
139
A
C
MSE
59
1_555
A
THR
140
A
N
THR
60
1_555
covale
1.328
A
GLU
163
A
C
GLU
83
1_555
A
MSE
164
A
N
MSE
84
1_555
covale
1.338
A
MSE
164
A
C
MSE
84
1_555
A
ILE
165
A
N
ILE
85
1_555
covale
1.328
A
LEU
172
A
C
LEU
92
1_555
A
MSE
173
A
N
MSE
93
1_555
covale
1.332
A
MSE
173
A
C
MSE
93
1_555
A
SER
174
A
N
SER
94
1_555
covale
1.317
A
LEU
184
A
C
LEU
104
1_555
A
MSE
185
A
N
MSE
105
1_555
covale
1.331
A
MSE
185
A
C
MSE
105
1_555
A
PRO
186
A
N
PRO
106
1_555
covale
1.324
A
VAL
241
A
C
VAL
161
1_555
A
MSE
242
A
N
MSE
162
1_555
covale
1.325
A
MSE
242
A
C
MSE
162
1_555
A
SER
243
A
N
SER
163
1_555
covale
1.329
A
ASP
306
A
C
ASP
226
1_555
A
MSE
307
A
N
MSE
227
1_555
covale
1.326
A
MSE
307
A
C
MSE
227
1_555
A
PHE
308
A
N
PHE
228
1_555
TRANSFERASE
SET domain, histone lysine methyltransferase, knot, TRANSFERASE
SET7_HUMAN
UNP
1
81
Q8WTS6
VLQGTYVDGELNGPAQEYDTDGRLIFKGQYKDNIRHGVCWIYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFI
DGEMIEGKLATLMSTEEGRPHFELMPGNSVYHFDKSTSSCISTNALLPDPYESERVYVAESLISSAGEGLFSKVAVGPNT
VMSFYNGVRITHQEVDSRDWALNGNTLSLDEETVIDVPEPYNHVSKYCASLGHKANHSFTPNCIYDMFVHPRFGPIKCIR
TLRAVEADEELTVAYGY
81
337
1MUF
81
337
Q8WTS6
A
1
1
257
1
MET
MODIFIED RESIDUE
MSE
139
1MUF
A
Q8WTS6
UNP
139
59
1
MET
MODIFIED RESIDUE
MSE
164
1MUF
A
Q8WTS6
UNP
164
84
1
MET
MODIFIED RESIDUE
MSE
173
1MUF
A
Q8WTS6
UNP
173
93
1
MET
MODIFIED RESIDUE
MSE
185
1MUF
A
Q8WTS6
UNP
185
105
1
MET
MODIFIED RESIDUE
MSE
242
1MUF
A
Q8WTS6
UNP
242
162
1
MET
MODIFIED RESIDUE
MSE
307
1MUF
A
Q8WTS6
UNP
307
227
9
9
4
3
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LEU
82
A
LEU
2
A
TYR
86
A
TYR
6
A
LEU
91
A
LEU
11
A
TYR
98
A
TYR
18
A
LEU
104
A
LEU
24
A
LYS
111
A
LYS
31
A
ILE
114
A
ILE
34
A
TYR
122
A
TYR
42
A
SER
128
A
SER
48
A
GLU
132
A
GLU
52
A
GLY
141
A
GLY
61
A
VAL
147
A
VAL
67
A
THR
153
A
THR
73
A
ILE
160
A
ILE
80
A
GLU
163
A
GLU
83
A
SER
174
A
SER
94
A
HIS
181
A
HIS
101
A
LEU
184
A
LEU
104
A
LEU
82
A
LEU
2
A
TYR
86
A
TYR
6
A
LEU
91
A
LEU
11
A
TYR
98
A
TYR
18
A
LEU
104
A
LEU
24
A
LYS
111
A
LYS
31
A
ILE
114
A
ILE
34
A
TYR
122
A
TYR
42
A
SER
128
A
SER
48
A
GLU
132
A
GLU
52
A
GLY
141
A
GLY
61
A
VAL
147
A
VAL
67
A
THR
153
A
THR
73
A
ILE
160
A
ILE
80
A
GLU
163
A
GLU
83
A
SER
174
A
SER
94
A
VAL
190
A
VAL
110
A
TYR
191
A
TYR
111
A
VAL
216
A
VAL
136
A
GLU
220
A
GLU
140
A
GLU
228
A
GLU
148
A
SER
232
A
SER
152
A
GLU
330
A
GLU
250
A
VAL
333
A
VAL
253
A
ASN
296
A
ASN
216
A
HIS
297
A
HIS
217
A
VAL
241
A
VAL
161
A
TYR
245
A
TYR
165
A
GLY
314
A
GLY
234
A
THR
321
A
THR
241
A
CYS
303
A
CYS
223
A
HIS
310
A
HIS
230
A
VAL
248
A
VAL
168
A
ILE
250
A
ILE
170
A
THR
273
A
THR
193
A
ASP
276
A
ASP
196
A
THR
266
A
THR
186
A
ASP
270
A
ASP
190
181
P 64 2 2