0.032165 0.000000 0.000000 0.000000 0.018070 0.000000 0.000000 0.000000 0.008501 0.00000 0.00000 0.00000 Ramstein, J. Hervouet, N. Coste, F. Zelwer, C. Oberto, J. Castaing, B. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 31.090 55.340 117.630 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 147 N N N 148 S C N 149 N C N 150 N O N 151 S C N 152 N C N 153 N C N 154 N C N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N N N 170 S C N 171 N C N 172 N O N 173 N C N 174 N C N 175 N C N 176 N C N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 S C N 193 N C N 194 N O N 195 N C N 196 N C N 197 N C N 198 N C N 199 N N N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N N N 217 S C N 218 N C N 219 N O N 220 N C N 221 N C N 222 N S N 223 N C N 224 N O N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N N N 237 S C N 238 N C N 239 N O N 240 N C Y 241 N C Y 242 N C Y 243 N C Y 244 N C Y 245 N C Y 246 N C N 247 N O N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N N N 260 S C N 261 N C N 262 N O N 263 N C N 264 N C N 265 N C N 266 N O N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N N N 277 S C N 278 N C N 279 N O N 280 N C N 281 N O N 282 N O N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 R C N 295 N O N 296 N C N 297 N O N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N N N 308 S C N 309 N C N 310 N O N 311 N C N 312 N C N 313 N C N 314 N O N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing Y 235 N doub Y 236 N sing Y 237 N sing N 238 N sing Y 239 N doub N 240 N sing Y 241 N doub N 242 N sing Y 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N doub N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N doub N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing UK J.Mol.Biol. JMOBAK 0070 0022-2836 331 101 121 10.1016/S0022-2836(03)00725-3 12875839 Evidence of a Thermal Unfolding Dimeric Intermediate for the Escherichia coli Histone-like HU Proteins: Thermodynamics and Structure. 2003 DK Acta Crystallogr.,Sect.D ABCRE6 0766 0907-4449 55 1952 1954 10.1107/S0907444999011361 Crystallization and preliminary X-ray diffraction analysis of the homodimeric form alpha2 of the HU protein from E. coli 1999 10.2210/pdb1mul/pdb pdb_00001mul 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 IMAGE PLATE 1999-07-01 MARRESEARCH GRAPHITE SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU200 9549.979 DNA binding protein HU-alpha 1 man polymer 18.015 water 50 nat water NS2, HU-2 no no MNKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKEGDAVQLVGFGTFKVNHRAERTGRNPQTGKEIKIAAANVPAFV SGKALKDAVK MNKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKEGDAVQLVGFGTFKVNHRAERTGRNPQTGKEIKIAAANVPAFV SGKALKDAVK A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Escherichia Escherichia Escherichia coli sample HUPA 562 Escherichia coli 511693 Escherichia coli BL21 BL21 PLASMID pJEShupA 1 3.07 59.59 VAPOR DIFFUSION, HANGING DROP 7.5 PEG 4000, isopropanol, hepes, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K 293 chem_comp_atom chem_comp_bond database_2 repository Initial release Version format compliance Derived calculations Version format compliance Data collection Database references 1 0 2003-08-05 1 1 2008-04-28 1 2 2011-07-13 1 3 2024-03-13 _database_2.pdbx_DOI _database_2.pdbx_database_accession RCSB Y PDBJ 2002-09-24 REL REL HOH water HOH 100 2 HOH HOH 100 A HOH 101 2 HOH HOH 101 A HOH 102 2 HOH HOH 102 A HOH 103 2 HOH HOH 103 A HOH 104 2 HOH HOH 104 A HOH 105 2 HOH HOH 105 A HOH 106 2 HOH HOH 106 A HOH 107 2 HOH HOH 107 A HOH 108 2 HOH HOH 108 A HOH 109 2 HOH HOH 109 A HOH 110 2 HOH HOH 110 A HOH 111 2 HOH HOH 111 A HOH 112 2 HOH HOH 112 A HOH 113 2 HOH HOH 113 A HOH 114 2 HOH HOH 114 A HOH 115 2 HOH HOH 115 A HOH 116 2 HOH HOH 116 A HOH 117 2 HOH HOH 117 A HOH 118 2 HOH HOH 118 A HOH 119 2 HOH HOH 119 A HOH 120 2 HOH HOH 120 A HOH 121 2 HOH HOH 121 A HOH 122 2 HOH HOH 122 A HOH 123 2 HOH HOH 123 A HOH 124 2 HOH HOH 124 A HOH 125 2 HOH HOH 125 A HOH 126 2 HOH HOH 126 A HOH 127 2 HOH HOH 127 A HOH 128 2 HOH HOH 128 A HOH 129 2 HOH HOH 129 A HOH 130 2 HOH HOH 130 A HOH 131 2 HOH HOH 131 A HOH 132 2 HOH HOH 132 A HOH 133 2 HOH HOH 133 A HOH 135 2 HOH HOH 135 A HOH 137 2 HOH HOH 137 A HOH 138 2 HOH HOH 138 A HOH 140 2 HOH HOH 140 A HOH 141 2 HOH HOH 141 A HOH 142 2 HOH HOH 142 A HOH 144 2 HOH HOH 144 A HOH 145 2 HOH HOH 145 A HOH 146 2 HOH HOH 146 A HOH 147 2 HOH HOH 147 A HOH 148 2 HOH HOH 148 A HOH 149 2 HOH HOH 149 A HOH 150 2 HOH HOH 150 A HOH 151 2 HOH HOH 151 A HOH 152 2 HOH HOH 152 A HOH 153 2 HOH HOH 153 A MET 1 n 1 MET 1 A ASN 2 n 2 ASN 2 A LYS 3 n 3 LYS 3 A THR 4 n 4 THR 4 A GLN 5 n 5 GLN 5 A LEU 6 n 6 LEU 6 A ILE 7 n 7 ILE 7 A ASP 8 n 8 ASP 8 A VAL 9 n 9 VAL 9 A ILE 10 n 10 ILE 10 A ALA 11 n 11 ALA 11 A GLU 12 n 12 GLU 12 A LYS 13 n 13 LYS 13 A ALA 14 n 14 ALA 14 A GLU 15 n 15 GLU 15 A LEU 16 n 16 LEU 16 A SER 17 n 17 SER 17 A LYS 18 n 18 LYS 18 A THR 19 n 19 THR 19 A GLN 20 n 20 GLN 20 A ALA 21 n 21 ALA 21 A LYS 22 n 22 LYS 22 A ALA 23 n 23 ALA 23 A ALA 24 n 24 ALA 24 A LEU 25 n 25 LEU 25 A GLU 26 n 26 GLU 26 A SER 27 n 27 SER 27 A THR 28 n 28 THR 28 A LEU 29 n 29 LEU 29 A ALA 30 n 30 ALA 30 A ALA 31 n 31 ALA 31 A ILE 32 n 32 ILE 32 A THR 33 n 33 THR 33 A GLU 34 n 34 GLU 34 A SER 35 n 35 SER 35 A LEU 36 n 36 LEU 36 A LYS 37 n 37 LYS 37 A GLU 38 n 38 GLU 38 A GLY 39 n 39 GLY 39 A ASP 40 n 40 ASP 40 A ALA 41 n 41 ALA 41 A VAL 42 n 42 VAL 42 A GLN 43 n 43 GLN 43 A LEU 44 n 44 LEU 44 A VAL 45 n 45 VAL 45 A GLY 46 n 46 GLY 46 A PHE 47 n 47 PHE 47 A GLY 48 n 48 GLY 48 A THR 49 n 49 THR 49 A PHE 50 n 50 PHE 50 A LYS 51 n 51 LYS 51 A VAL 52 n 52 VAL 52 A ASN 53 n 53 ASN 53 A HIS 54 n 54 HIS 54 A ARG 55 n 55 ARG 55 A ALA 56 n 56 ALA 56 A GLU 57 n 57 GLU 57 A n 58 58 A n 59 59 A n 60 60 A n 61 61 A n 62 62 A n 63 63 A n 64 64 A n 65 65 A n 66 66 A n 67 67 A n 68 68 A n 69 69 A n 70 70 A n 71 71 A ALA 72 n 72 ALA 72 A ALA 73 n 73 ALA 73 A ALA 74 n 74 ALA 74 A ASN 75 n 75 ASN 75 A VAL 76 n 76 VAL 76 A PRO 77 n 77 PRO 77 A ALA 78 n 78 ALA 78 A PHE 79 n 79 PHE 79 A VAL 80 n 80 VAL 80 A SER 81 n 81 SER 81 A GLY 82 n 82 GLY 82 A LYS 83 n 83 LYS 83 A ALA 84 n 84 ALA 84 A LEU 85 n 85 LEU 85 A LYS 86 n 86 LYS 86 A ASP 87 n 87 ASP 87 A ALA 88 n 88 ALA 88 A VAL 89 n 89 VAL 89 A LYS 90 n 90 LYS 90 A author_defined_assembly 1 monomeric software_defined_assembly PISA,PQS 2 dimeric 3450 -36 7850 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_665 -x+1,-y+1,z crystal symmetry operation 31.0900000000 55.3400000000 0.0000000000 A N LEU 44 A N LEU 44 A O GLY 48 A O GLY 48 A N ASN 53 A N ASN 53 A O VAL 76 A O VAL 76 1 A CG GLU 12 A CG GLU 12 1 Y 1 A CD GLU 12 A CD GLU 12 1 Y 1 A OE1 GLU 12 A OE1 GLU 12 1 Y 1 A OE2 GLU 12 A OE2 GLU 12 1 Y 1 A CD LYS 13 A CD LYS 13 1 Y 1 A CE LYS 13 A CE LYS 13 1 Y 1 A NZ LYS 13 A NZ LYS 13 1 Y 1 A CE LYS 18 A CE LYS 18 1 Y 1 A NZ LYS 18 A NZ LYS 18 1 Y 1 A OG1 THR 19 A OG1 THR 19 1 Y 1 A CG2 THR 19 A CG2 THR 19 1 Y 1 A CE LYS 51 A CE LYS 51 1 Y 1 A NZ LYS 51 A NZ LYS 51 1 Y 1 A NE ARG 55 A NE ARG 55 1 Y 1 A CZ ARG 55 A CZ ARG 55 1 Y 1 A NH1 ARG 55 A NH1 ARG 55 1 Y 1 A NH2 ARG 55 A NH2 ARG 55 1 Y 1 A CD LYS 90 A CD LYS 90 1 Y 1 A CE LYS 90 A CE LYS 90 1 Y 1 A NZ LYS 90 A NZ LYS 90 1 Y 1 A ARG 58 A ARG 58 1 Y 1 A THR 59 A THR 59 1 Y 1 A GLY 60 A GLY 60 1 Y 1 A ARG 61 A ARG 61 1 Y 1 A ASN 62 A ASN 62 1 Y 1 A PRO 63 A PRO 63 1 Y 1 A GLN 64 A GLN 64 1 Y 1 A THR 65 A THR 65 1 Y 1 A GLY 66 A GLY 66 1 Y 1 A LYS 67 A LYS 67 1 Y 1 A GLU 68 A GLU 68 1 Y 1 A ILE 69 A ILE 69 1 Y 1 A LYS 70 A LYS 70 1 Y 1 A ILE 71 A ILE 71 1 Y 1 A PHE 47 -127.39 -68.58 1 A ALA 73 -53.87 174.68 1 A ALA 74 168.11 158.92 PROTEIN_REP.PARAM PROTEIN.TOP WATER_REP.PARAM WATER.TOP 27.9 -9.15 0.00 0.00 8.06 0.00 1.09 BULK SOLVENT MODEL USED 0.267 0.012 0.234 0.256 0.234 2.30 20.00 485 4755 4607 10.5 96.0 RANDOM 983947.18 0.000 1 RESTRAINED THROUGHOUT 2 MOLECULAR REPLACEMENT FLAT MODEL 45.2065 0.358714 0.37 0.29 5.00 0.26 0.24 2.30 20.00 50 589 0 0 539 0.006 1.2 21.1 0.68 1.20 1.50 1.95 2.00 1.81 2.00 2.70 2.50 0.339 0.040 0.267 2.44 73 660 6 10.0 94.2 22.1 2.3 32 1MUL 4755 4607 1 1 0.056 1 11.2 3.5 2.3 2.36 4.4 344 0.161 1 3.6 data reduction MOSFLM data scaling SCALA phasing AMoRE refinement CNS 0.5 data scaling CCP4 (SCALA) Crystal structure of the E. coli HU alpha2 protein 1 N N 2 N N A ASN 2 A ASN 2 HELX_P A ALA 14 A ALA 14 1 1 13 A SER 17 A SER 17 HELX_P A GLU 38 A GLU 38 1 2 22 A GLY 82 A GLY 82 HELX_P A LYS 90 A LYS 90 1 3 9 DNA BINDING PROTEIN histone-like, DNA BINDING PROTEIN DBHA_ECOLI UNP 1 1 P0ACF0 MNKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKEGDAVQLVGFGTFKVNHRAERTGRNPQTGKEIKIAAANVPAFV SGKALKDAVK 1 90 1MUL 1 90 P0ACF0 A 1 1 90 3 anti-parallel anti-parallel A VAL 42 A VAL 42 A LEU 44 A LEU 44 A GLY 48 A GLY 48 A ARG 55 A ARG 55 A ALA 74 A ALA 74 A SER 81 A SER 81 23 I 2 2 2