1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Greenfield, N.J. Swapna, G.V.T. Huang, Y. Palm, T. Graboski, S. Montelione, G.T. Hitchcock-Degregori, S.E. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking US Biochemistry BICHAW 0033 0006-2960 42 614 619 10.1021/bi026989e 12534273 The Structure of the Carboxyl Terminus of Striated alpha-Tropomyosin in Solution Reveals an Unusual Parallel Arrangement of Interacting alpha-Helices 2003 10.2210/pdb1mv4/pdb pdb_00001mv4 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 4177.707 Tropomyosin 1 alpha chain C-TERMINAL (RESIDUES 251-284) 2 man polymer Alpha-tropomyosin no no GCGKSIDDLEDELYAQKLKYKAISEELDHALKDMTSI GCGKSIDDLEDELYAQKLKYKAISEELDHALKDMTSI A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Norway rat Rattus SKELETAL MUSCLE Escherichia sample TPM1 10116 Rattus norvegicus 562 Escherichia coli DH5 PLASMID PPROEX HTA database_2 pdbx_nmr_software pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 2003-02-18 1 1 2007-10-21 1 2 2011-07-13 1 3 2022-02-23 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name 1IHQ IS Glytm1bzip: A Chimeric Peptide Model Of The N-Terminus Of A Rat Short Alpha Tropomyosin With The N-Terminus Encoded By Exon 1b 1TMZ IS Tmzip: A Chimeric Peptide Model Of The N-Terminus Of Alpha Tropomyosin, Nmr, 15 Structures 1IC2 IS Deciphering The Design Of The Tropomyosin Molecule SEQUENCE THIS SEQUENCE HAS A SYNTHETIC GCG AT N-TERMINUS AND CONTAINS THE MUTATION N279K. THE SEQUENCE DATABASE MATCH, HOWEVER, erroneously HAS A K AT THIS POSITION as well. The sequence in the database should have an ASN at position 279, which has been engineered to LYS in this entry. RCSB Y RCSB 2002-09-24 REL REL THE RESONANCE ASSIGNMENTS WERE MADE USING THROUGH BOND TRIPLE RESONANCE EXPERIMENTS INCLUDING HN(CA)CO, HNCO, H(CA)(C0)NH, H(CA)NH, CA(CO)NH, CANH, CBCA(CO)NH, CBCANH, HCCH-COSY AND CCH-COSY STRUCTURES WITH COVALENT GEOMETRY, STRUCTURES WITH THE LEAST RESTRAINT VIOLATIONS 200 10 3D_13C-separated_NOESY 3D_15N-separated_NOESY 3D_13C-X-FILTERED NOESY 0.12 N 6.40 1 atm 283.00 K REFINEMENT DETAILS CAN BE FOUND IN REFERENCE CITED ABOVE 1648 CONFORMATIONALLY- RESTRICTING NOE CONSTRAINTS (OUT OF A TOTAL OF 2036 NOE DERIVED DISTANCES) 52 LOOSE DIHEDRAL ANGLE CONSTRAINTS AND 48 BACKBONE INTRA- HELICAL HYDROGEN BOND CONSTRAINTS WERE UTILILIZED. 1 fewest violations 1-2 MM 100 MM NACL, 20 MM POTASSIUM PHOSPHATE, 10% DUETERIUM OXIDE, 90% H20, PH 6.4 GUNTERT, WUTHRICH refinement DYANA 1.5 VARIAN ASSOCIATES structure solution VNMR 5.3B GUNTERT, WUTHRICH structure solution DYANA 1.5 HUANG, MONTELIONE structure solution AutoAssign 1.0 HUANG, MONTELIONE structure solution AutoStructure 1.0 GODDARD, KNELLER structure solution Sparky 3.74 600 Varian INOVA GLY 248 n 1 GLY 248 A CYS 249 n 2 CYS 249 A GLY 250 n 3 GLY 250 A LYS 251 n 4 LYS 251 A SER 252 n 5 SER 252 A ILE 253 n 6 ILE 253 A ASP 254 n 7 ASP 254 A ASP 255 n 8 ASP 255 A LEU 256 n 9 LEU 256 A GLU 257 n 10 GLU 257 A ASP 258 n 11 ASP 258 A GLU 259 n 12 GLU 259 A LEU 260 n 13 LEU 260 A TYR 261 n 14 TYR 261 A ALA 262 n 15 ALA 262 A GLN 263 n 16 GLN 263 A LYS 264 n 17 LYS 264 A LEU 265 n 18 LEU 265 A LYS 266 n 19 LYS 266 A TYR 267 n 20 TYR 267 A LYS 268 n 21 LYS 268 A ALA 269 n 22 ALA 269 A ILE 270 n 23 ILE 270 A SER 271 n 24 SER 271 A GLU 272 n 25 GLU 272 A GLU 273 n 26 GLU 273 A LEU 274 n 27 LEU 274 A ASP 275 n 28 ASP 275 A HIS 276 n 29 HIS 276 A ALA 277 n 30 ALA 277 A LEU 278 n 31 LEU 278 A LYS 279 n 32 LYS 279 A ASP 280 n 33 ASP 280 A MET 281 n 34 MET 281 A THR 282 n 35 THR 282 A SER 283 n 36 SER 283 A ILE 284 n 37 ILE 284 A GLY 248 n 1 GLY 248 B CYS 249 n 2 CYS 249 B GLY 250 n 3 GLY 250 B LYS 251 n 4 LYS 251 B SER 252 n 5 SER 252 B ILE 253 n 6 ILE 253 B ASP 254 n 7 ASP 254 B ASP 255 n 8 ASP 255 B LEU 256 n 9 LEU 256 B GLU 257 n 10 GLU 257 B ASP 258 n 11 ASP 258 B GLU 259 n 12 GLU 259 B LEU 260 n 13 LEU 260 B TYR 261 n 14 TYR 261 B ALA 262 n 15 ALA 262 B GLN 263 n 16 GLN 263 B LYS 264 n 17 LYS 264 B LEU 265 n 18 LEU 265 B LYS 266 n 19 LYS 266 B TYR 267 n 20 TYR 267 B LYS 268 n 21 LYS 268 B ALA 269 n 22 ALA 269 B ILE 270 n 23 ILE 270 B SER 271 n 24 SER 271 B GLU 272 n 25 GLU 272 B GLU 273 n 26 GLU 273 B LEU 274 n 27 LEU 274 B ASP 275 n 28 ASP 275 B HIS 276 n 29 HIS 276 B ALA 277 n 30 ALA 277 B LEU 278 n 31 LEU 278 B LYS 279 n 32 LYS 279 B ASP 280 n 33 ASP 280 B MET 281 n 34 MET 281 B THR 282 n 35 THR 282 B SER 283 n 36 SER 283 B ILE 284 n 37 ILE 284 B author_defined_assembly 2 dimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A A O H LEU THR 278 282 1.54 5 A A O H LEU THR 278 282 1.58 7 B B O H SER LEU 252 256 1.50 10 B B O H THR ILE 282 284 1.47 1 A CYS 249 47.35 -154.92 1 A LYS 251 -141.51 -81.12 1 A SER 252 -151.04 37.22 1 A LEU 260 -64.91 -73.92 1 A THR 282 55.11 160.02 1 A SER 283 -54.19 91.21 1 B CYS 249 -117.41 -77.45 1 B LYS 251 -151.91 -90.25 1 B THR 282 55.01 164.91 2 A LYS 251 172.65 -83.82 2 A SER 252 -142.65 22.05 2 A LEU 256 -52.78 -76.07 2 A LEU 260 -65.54 -77.00 2 A SER 283 3.72 98.79 2 B CYS 249 87.55 -55.45 2 B LYS 251 -163.02 -96.92 2 B SER 252 -160.07 42.13 2 B ASP 258 -69.49 -71.85 2 B LEU 260 -64.87 -72.26 2 B THR 282 47.63 -178.41 3 A CYS 249 173.91 -151.72 3 A LYS 251 -154.81 -61.73 3 A THR 282 33.34 -154.74 3 B LYS 251 -171.29 -54.60 3 B LEU 260 -67.73 -75.99 3 B SER 283 8.58 96.95 4 A CYS 249 72.18 -65.68 4 A LYS 251 165.42 -72.40 4 A LEU 256 -56.78 -76.55 4 A ASP 258 -50.57 -71.18 4 A LEU 260 -64.54 -76.94 4 A THR 282 27.04 -135.23 4 B CYS 249 -172.87 99.73 4 B LYS 251 -158.68 -71.82 4 B ASP 258 -66.32 -72.12 4 B THR 282 49.29 179.10 5 A LYS 251 176.16 -84.42 5 A THR 282 46.47 -174.95 5 B CYS 249 65.47 -107.33 5 B LYS 251 175.65 -73.98 5 B LEU 256 -56.11 -72.30 5 B ASP 258 -50.54 -72.03 5 B LEU 260 -70.45 -75.37 5 B TYR 261 -37.57 -37.33 5 B THR 282 52.98 165.78 6 A CYS 249 89.06 -42.87 6 A LYS 251 163.25 -73.16 6 A LEU 256 -60.67 -70.60 6 A LEU 260 -67.80 -78.50 6 A THR 282 46.58 -173.70 6 B CYS 249 51.44 -149.13 6 B LYS 251 178.33 -99.88 6 B SER 252 -148.23 24.54 6 B THR 282 44.76 -160.09 6 B SER 283 -77.78 22.32 7 A CYS 249 47.16 91.77 7 A LYS 251 -165.57 -68.94 7 A THR 282 -48.18 155.47 7 A SER 283 4.27 96.90 7 B CYS 249 46.42 -97.13 7 B LYS 251 175.13 -85.57 7 B ILE 253 -32.99 -37.78 7 B ASP 254 -58.72 -74.97 7 B LEU 256 -66.13 -77.59 7 B ASP 258 -68.29 -70.36 7 B THR 282 53.93 165.27 8 A CYS 249 88.13 -45.14 8 A LYS 251 -155.62 -84.38 8 A ASP 254 -45.69 -70.62 8 A LEU 260 -63.86 -75.27 8 A THR 282 45.71 -173.62 8 B LYS 251 176.39 -93.20 8 B ASP 258 -65.58 -73.22 8 B THR 282 81.29 20.77 9 A CYS 249 44.24 94.50 9 A LYS 251 -177.05 -57.94 9 A SER 252 -154.53 86.93 9 A ASP 258 -66.13 -71.76 9 A THR 282 42.29 -168.94 9 B CYS 249 -145.47 -133.83 9 B LYS 251 165.17 -89.23 9 B LEU 256 -59.03 -70.86 9 B ASP 258 -61.46 -74.93 9 B LEU 260 -64.86 -76.25 9 B THR 282 31.15 -148.75 10 A CYS 249 60.10 -87.48 10 A LYS 251 -155.39 -93.32 10 A SER 252 -152.80 72.12 10 A ASP 258 -59.92 -70.12 10 A LEU 260 -67.17 -75.28 10 A THR 282 53.11 163.40 10 B LYS 251 -176.32 -128.66 10 B LEU 256 -65.42 -70.14 10 B LEU 260 -68.08 -71.90 10 B THR 282 -38.87 -179.19 10 B SER 283 -65.87 53.64 TM9A251-284: A Peptide Model of the C-Terminus of a Rat Striated Alpha Tropomyosin 1 N N 1 N N A ILE 253 A ILE 6 HELX_P A THR 282 A THR 35 1 1 30 B ILE 253 B ILE 6 HELX_P B ASP 280 B ASP 33 1 2 28 disulf 2.026 A CYS 249 A SG CYS 2 1_555 B CYS 249 B SG CYS 2 1_555 DE NOVO PROTEIN TROPOMYOSIN, EXON 9A, ACTIN-BINDING, TROPONIN BINDING, MUSCLE, ALPHA-HELIX, COILED-COIL, DIMER, PEPTIDE-MODEL, TWO-CHAINED, DISULFIDE CROSS-LINKED, DE NOVO PROTEIN TPM1_RAT UNP 1 251 P04692 KSIDDLEDELYAQKLKYKAISEELDHALKDMTSI 251 284 1MV4 251 284 P04692 A 1 4 37 251 284 1MV4 251 284 P04692 B 1 4 37 1 SEE REMARK 999 GLY 248 1MV4 A P04692 UNP 1 1 SEE REMARK 999 CYS 249 1MV4 A P04692 UNP 2 1 SEE REMARK 999 GLY 250 1MV4 A P04692 UNP 3 2 SEE REMARK 999 GLY 248 1MV4 B P04692 UNP 1 2 SEE REMARK 999 CYS 249 1MV4 B P04692 UNP 2 2 SEE REMARK 999 GLY 250 1MV4 B P04692 UNP 3 1 P 1