1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Wu, M. Santalucia, J. Turner, D.H. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C10 H14 N5 O7 P 347.221 y ADENOSINE-5'-MONOPHOSPHATE RNA linking C9 H14 N3 O8 P 323.197 y CYTIDINE-5'-MONOPHOSPHATE RNA linking C10 H14 N5 O8 P 363.221 y GUANOSINE-5'-MONOPHOSPHATE RNA linking US Biochemistry BICHAW 0033 0006-2960 35 9677 9689 10.1021/bi960133q 8703939 Solution structure of (rGCGGACGC)2 by two-dimensional NMR and the iterative relaxation matrix approach. 1996 10.2210/pdb1mwg/pdb pdb_00001mwg 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 ANTI-PARALLEL RNA DUPLEX, TANDEM G\:A MISMATCH 2580.617 RNA (5'-R(*GP*GP*CP*AP*GP*GP*CP*C)-3') 2 syn polymer no no GGCAGGCC GGCAGGCC A,B polyribonucleotide n n n n n n n n -2.436 1 19 A 1 B 16 -1.377 A_G1:C16_B 1 -17.695 0.574 -0.022 -0.026 -6.996 1 19 A 2 B 15 -1.327 A_G2:C15_B 2 -5.779 -0.088 0.444 -0.020 -2.655 1 19 A 3 B 14 -4.963 A_C3:G14_B 3 -12.678 -0.112 0.492 -0.051 6.817 8 A 4 B 13 -14.372 A_A4:G13_B 4 -6.293 0.175 0.036 1.682 -7.638 8 A 5 B 12 -14.808 A_G5:A12_B 5 -6.401 0.001 0.044 1.684 2.275 1 19 A 6 B 11 -5.212 A_G6:C11_B 6 -12.962 0.121 0.513 -0.059 6.734 1 19 A 7 B 10 -1.447 A_C7:G10_B 7 -5.558 0.089 0.472 -0.027 2.952 1 19 A 8 B 9 -1.603 A_C8:G9_B 8 -18.045 -0.577 -0.009 -0.032 2.409 28.447 A A 1 2 14.028 B B 16 15 2.948 6.825 -0.107 -1.944 AA_G1G2:C15C16_BB 1 -1.600 3.289 27.587 -5.257 -0.087 2.694 35.929 A A 2 3 8.821 B B 15 14 2.978 5.421 -0.305 -1.625 AA_G2C3:G14C15_BB 2 1.502 -2.444 35.501 -3.310 0.682 2.390 33.287 A A 3 4 10.679 B B 14 13 2.748 6.076 -0.196 -1.594 AA_C3A4:G13G14_BB 3 3.217 -5.654 32.589 -3.587 0.768 1.932 27.752 A A 4 5 22.659 B B 13 12 3.188 10.602 -0.015 -2.722 AA_A4G5:A12G13_BB 4 0.181 -0.387 25.683 -7.756 0.067 2.358 32.678 A A 5 6 11.218 B B 12 11 2.731 6.266 0.210 -1.577 AA_G5G6:C11A12_BB 5 -2.986 5.346 31.952 -3.657 -0.781 2.700 35.798 A A 6 7 8.699 B B 11 10 2.979 5.327 0.313 -1.616 AA_G6C7:G10C11_BB 6 -1.573 2.569 35.379 -3.298 -0.707 2.406 28.361 A A 7 8 13.745 B B 10 9 2.931 6.670 0.108 -1.937 AA_C7C8:G9G10_BB 7 1.694 -3.492 27.530 -5.228 0.103 database_2 pdbx_database_status pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Database references Derived calculations Other 1 0 1997-03-12 1 1 2008-03-24 1 2 2011-07-13 1 3 2022-02-23 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site Y BNL 1996-12-13 REL 1 BIOSYM TECHNOLOGIES, INC. refinement DISCOVER, AMBER FORCE FIELD FIELD G 1 n 1 G 1 A G 2 n 2 G 2 A C 3 n 3 C 3 A A 4 n 4 A 4 A G 5 n 5 G 5 A G 6 n 6 G 6 A C 7 n 7 C 7 A C 8 n 8 C 8 A G 9 n 1 G 9 B G 10 n 2 G 10 B C 11 n 3 C 11 B A 12 n 4 A 12 B G 13 n 5 G 13 B G 14 n 6 G 14 B C 15 n 7 C 15 B C 16 n 8 C 16 B author_defined_assembly 2 dimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 B B HO2' H5' G G 9 10 1.23 1 A A HO2' H5' A G 4 5 1.28 1 -6.71 0.80 109.40 102.69 A A A O5' C5' C4' A A A 4 4 4 N 1 7.63 0.90 109.80 117.43 A A A C5' C4' O4' A A A 4 4 4 N 1 6.13 0.80 101.50 107.63 A A A C3' C2' C1' A A A 4 4 4 N 1 7.34 0.90 109.80 117.14 A A A C5' C4' O4' G G G 5 5 5 N 1 7.64 0.90 109.80 117.44 A A A C5' C4' O4' C C C 7 7 7 N 1 -7.78 1.10 112.00 104.22 A A A N1 C1' C2' C C C 8 8 8 N 1 4.77 0.70 108.50 113.27 A A A O4' C1' N1 C C C 8 8 8 N 1 5.65 0.90 109.80 115.45 B B B C5' C4' O4' C C C 11 11 11 N 1 -6.37 1.00 102.60 96.23 B B B C4' C3' C2' C C C 11 11 11 N 1 -6.54 0.80 109.40 102.86 B B B O5' C5' C4' A A A 12 12 12 N 1 7.34 0.90 109.80 117.14 B B B C5' C4' O4' A A A 12 12 12 N 1 5.78 0.80 101.50 107.28 B B B C3' C2' C1' A A A 12 12 12 N 1 7.60 0.90 109.80 117.40 B B B C5' C4' O4' G G G 13 13 13 N 1 8.17 0.90 109.80 117.97 B B B C5' C4' O4' C C C 15 15 15 N 1 -8.84 1.10 112.00 103.16 B B B N1 C1' C2' C C C 16 16 16 N 1 A A C2' C1' A A 4 4 -0.056 0.008 1.526 1.470 N 1 A A C8 N9 A A 4 4 -0.054 0.008 1.373 1.319 N 1 B B C2' C1' A A 12 12 -0.055 0.008 1.526 1.471 N 1 B B C8 N9 A A 12 12 -0.053 0.008 1.373 1.320 N refinement AMBER STRUCTURE OF RIBONUCLEIC ACID, NMR, MINIMIZED AVERAGE STRUCTURE 1 N N 1 N N hydrog WATSON-CRICK A G 1 A N1 G 1 1_555 B C 16 B N3 C 8 1_555 hydrog WATSON-CRICK A G 1 A N2 G 1 1_555 B C 16 B O2 C 8 1_555 hydrog WATSON-CRICK A G 1 A O6 G 1 1_555 B C 16 B N4 C 8 1_555 hydrog WATSON-CRICK A G 2 A N1 G 2 1_555 B C 15 B N3 C 7 1_555 hydrog WATSON-CRICK A G 2 A N2 G 2 1_555 B C 15 B O2 C 7 1_555 hydrog WATSON-CRICK A G 2 A O6 G 2 1_555 B C 15 B N4 C 7 1_555 hydrog WATSON-CRICK A C 3 A N3 C 3 1_555 B G 14 B N1 G 6 1_555 hydrog WATSON-CRICK A C 3 A N4 C 3 1_555 B G 14 B O6 G 6 1_555 hydrog WATSON-CRICK A C 3 A O2 C 3 1_555 B G 14 B N2 G 6 1_555 hydrog TYPE_8_PAIR A A 4 A N1 A 4 1_555 B G 13 B N1 G 5 1_555 hydrog TYPE_8_PAIR A A 4 A N6 A 4 1_555 B G 13 B O6 G 5 1_555 hydrog TYPE_8_PAIR A G 5 A N1 G 5 1_555 B A 12 B N1 A 4 1_555 hydrog TYPE_8_PAIR A G 5 A O6 G 5 1_555 B A 12 B N6 A 4 1_555 hydrog WATSON-CRICK A G 6 A N1 G 6 1_555 B C 11 B N3 C 3 1_555 hydrog WATSON-CRICK A G 6 A N2 G 6 1_555 B C 11 B O2 C 3 1_555 hydrog WATSON-CRICK A G 6 A O6 G 6 1_555 B C 11 B N4 C 3 1_555 hydrog WATSON-CRICK A C 7 A N3 C 7 1_555 B G 10 B N1 G 2 1_555 hydrog WATSON-CRICK A C 7 A N4 C 7 1_555 B G 10 B O6 G 2 1_555 hydrog WATSON-CRICK A C 7 A O2 C 7 1_555 B G 10 B N2 G 2 1_555 hydrog WATSON-CRICK A C 8 A N3 C 8 1_555 B G 9 B N1 G 1 1_555 hydrog WATSON-CRICK A C 8 A N4 C 8 1_555 B G 9 B O6 G 1 1_555 hydrog WATSON-CRICK A C 8 A O2 C 8 1_555 B G 9 B N2 G 1 1_555 RNA RIBONUCLEIC ACID, DUPLEX, G:A MISMATCH, RNA 1MWG PDB 1 1MWG 1 8 1MWG 1 8 1MWG A 1 1 8 9 16 1MWG 9 16 1MWG B 1 1 8 1 P 1