0.007758
0.004479
0.000000
0.000000
0.008958
0.000000
0.000000
0.000000
0.007153
0.00000
0.00000
0.00000
Takusagawa, F.
Kamitori, S.
Markham, G.D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
128.900
128.900
139.800
C10 H15 N5 O10 P2
427.201
n
ADENOSINE-5'-DIPHOSPHATE
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
K 1
39.098
POTASSIUM ION
non-polymer
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
O4 P -3
94.971
PHOSPHATE ION
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
P
N
2
N
O
N
3
N
O
N
4
N
O
N
5
S
P
N
6
N
O
N
7
N
O
N
8
N
O
N
9
N
O
N
10
N
C
N
11
R
C
N
12
N
O
N
13
S
C
N
14
N
O
N
15
R
C
N
16
N
O
N
17
R
C
Y
18
N
N
Y
19
N
C
Y
20
N
N
Y
21
N
C
Y
22
N
C
N
23
N
N
Y
24
N
N
Y
25
N
C
Y
26
N
N
Y
27
N
C
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
N
N
44
S
C
N
45
N
C
N
46
N
O
N
47
N
C
N
48
N
O
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
N
N
57
S
C
N
58
N
C
N
59
N
O
N
60
N
C
N
61
N
C
N
62
N
C
N
63
N
N
N
64
N
C
N
65
N
N
N
66
N
N
N
67
N
O
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
N
N
84
S
C
N
85
N
C
N
86
N
O
N
87
N
C
N
88
N
C
N
89
N
O
N
90
N
N
N
91
N
O
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
N
N
101
S
C
N
102
N
C
N
103
N
O
N
104
N
C
N
105
N
C
N
106
N
O
N
107
N
O
N
108
N
O
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
N
N
117
R
C
N
118
N
C
N
119
N
O
N
120
N
C
N
121
N
S
N
122
N
O
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
N
N
131
S
C
N
132
N
C
N
133
N
O
N
134
N
C
N
135
N
C
N
136
N
C
N
137
N
O
N
138
N
N
N
139
N
O
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
N
N
151
S
C
N
152
N
C
N
153
N
O
N
154
N
C
N
155
N
C
N
156
N
C
N
157
N
O
N
158
N
O
N
159
N
O
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
N
C
N
171
N
C
N
172
N
O
N
173
N
O
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
N
N
180
S
C
N
181
N
C
N
182
N
O
N
183
N
C
Y
184
N
C
Y
185
N
N
Y
186
N
C
Y
187
N
C
Y
188
N
N
N
189
N
O
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
N
N
201
S
C
N
202
N
C
N
203
N
O
N
204
S
C
N
205
N
C
N
206
N
C
N
207
N
C
N
208
N
O
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
K
N
223
N
N
N
224
S
C
N
225
N
C
N
226
N
O
N
227
N
C
N
228
N
C
N
229
N
C
N
230
N
C
N
231
N
O
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
N
N
246
S
C
N
247
N
C
N
248
N
O
N
249
N
C
N
250
N
C
N
251
N
C
N
252
N
C
N
253
N
N
N
254
N
O
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
N
N
271
S
C
N
272
N
C
N
273
N
O
N
274
N
C
N
275
N
C
N
276
N
S
N
277
N
C
N
278
N
O
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
MG
N
291
N
N
N
292
S
C
N
293
N
C
N
294
N
O
N
295
N
C
Y
296
N
C
Y
297
N
C
Y
298
N
C
Y
299
N
C
Y
300
N
C
Y
301
N
C
N
302
N
O
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
P
N
315
N
O
N
316
N
O
N
317
N
O
N
318
N
O
N
319
N
N
N
320
S
C
N
321
N
C
N
322
N
O
N
323
N
C
N
324
N
C
N
325
N
C
N
326
N
O
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
N
N
337
S
C
N
338
N
C
N
339
N
O
N
340
N
C
N
341
N
O
N
342
N
O
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
N
N
351
S
C
N
352
N
C
N
353
N
O
N
354
R
C
N
355
N
O
N
356
N
C
N
357
N
O
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
N
N
368
S
C
N
369
N
C
N
370
N
O
N
371
N
C
Y
372
N
C
Y
373
N
C
Y
374
N
C
Y
375
N
N
Y
376
N
C
Y
377
N
C
Y
378
N
C
Y
379
N
C
Y
380
N
C
N
381
N
O
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
N
N
395
S
C
N
396
N
C
N
397
N
O
N
398
N
C
Y
399
N
C
Y
400
N
C
Y
401
N
C
Y
402
N
C
Y
403
N
C
Y
404
N
C
N
405
N
O
N
406
N
O
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
N
N
419
S
C
N
420
N
C
N
421
N
O
N
422
N
C
N
423
N
C
N
424
N
C
N
425
N
O
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
Y
30
N
sing
Y
31
N
sing
Y
32
N
doub
N
33
N
sing
Y
34
N
sing
Y
35
N
sing
Y
36
N
doub
N
37
N
sing
Y
38
N
doub
N
39
N
sing
N
40
N
sing
Y
41
N
sing
Y
42
N
doub
N
43
N
sing
Y
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
doub
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
doub
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
doub
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
doub
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
doub
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
doub
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
doub
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
doub
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
doub
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
doub
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
Y
184
N
sing
Y
185
N
doub
Y
186
N
doub
N
187
N
sing
Y
188
N
sing
N
189
N
sing
Y
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
doub
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
doub
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
doub
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
Y
290
N
doub
Y
291
N
sing
Y
292
N
sing
N
293
N
sing
Y
294
N
doub
N
295
N
sing
Y
296
N
doub
N
297
N
sing
Y
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
doub
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
doub
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
doub
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
doub
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
Y
363
N
doub
Y
364
N
sing
Y
365
N
sing
N
366
N
sing
Y
367
N
doub
Y
368
N
sing
Y
369
N
sing
N
370
N
sing
Y
371
N
sing
Y
372
N
doub
N
373
N
sing
Y
374
N
doub
N
375
N
sing
Y
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
doub
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
Y
391
N
doub
Y
392
N
sing
Y
393
N
sing
N
394
N
sing
Y
395
N
doub
N
396
N
sing
Y
397
N
doub
N
398
N
sing
Y
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
doub
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
35
2586
2596
10.1021/bi952604z
8611562
Structure and function of S-adenosylmethionine synthetase: crystal structures of S-adenosylmethionine synthetase with ADP, BrADP, and PPi at 28 angstroms resolution.
1996
10.2210/pdb1mxb/pdb
pdb_00001mxb
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
298
1
AREA DETECTOR
XUONG-HAMLIN MULTIWIRE
GRAPHITE(002)
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RUH2R
41867.309
S-ADENOSYLMETHIONINE SYNTHETASE
2.5.1.6
1
nat
polymer
94.971
PHOSPHATE ION
1
syn
non-polymer
24.305
MAGNESIUM ION
2
syn
non-polymer
39.098
POTASSIUM ION
2
syn
non-polymer
427.201
ADENOSINE-5'-DIPHOSPHATE
1
syn
non-polymer
MAT, ATP\:L-METHIONINE S-ADENOSYLTRANSFERASE
no
no
AKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHS
DMGFDANSCAVLSAIGKQSPDINQGVDRADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWL
RPDAKSQVTFQYDDGKIVGIDAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCG
LTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKV
PSEQLTLLVREFFDLRPYGLIQMLDLLHPIYKETAAYGHFGREHFPWEKTDKAQLLRDAAGLK
AKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHS
DMGFDANSCAVLSAIGKQSPDINQGVDRADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWL
RPDAKSQVTFQYDDGKIVGIDAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCG
LTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKV
PSEQLTLLVREFFDLRPYGLIQMLDLLHPIYKETAAYGHFGREHFPWEKTDKAQLLRDAAGLK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
sample
562
Escherichia coli
6
3.99
63.
7.5
pH 7.5
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_struct_conn_angle
struct_conn
struct_site
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Atomic model
Data collection
Database references
Derived calculations
Other
Refinement description
1
0
1996-07-11
1
1
2008-03-24
1
2
2011-07-13
1
3
2011-11-16
1
4
2024-02-14
1
5
2024-04-03
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_symmetry
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
BNL
1996-01-10
REL
PO4
PHOSPHATE ION
MG
MAGNESIUM ION
K
POTASSIUM ION
ADP
ADENOSINE-5'-DIPHOSPHATE
MAT ITSELF
other
PO4
384
2
PO4
PO4
384
A
MG
411
3
MG
MG
411
A
MG
412
3
MG
MG
412
A
K
413
4
K
K
413
A
K
414
4
K
K
414
A
ADP
385
5
ADP
ADP
385
A
ALA
1
n
1
ALA
1
A
LYS
2
n
2
LYS
2
A
HIS
3
n
3
HIS
3
A
LEU
4
n
4
LEU
4
A
PHE
5
n
5
PHE
5
A
THR
6
n
6
THR
6
A
SER
7
n
7
SER
7
A
GLU
8
n
8
GLU
8
A
SER
9
n
9
SER
9
A
VAL
10
n
10
VAL
10
A
SER
11
n
11
SER
11
A
GLU
12
n
12
GLU
12
A
GLY
13
n
13
GLY
13
A
HIS
14
n
14
HIS
14
A
PRO
15
n
15
PRO
15
A
ASP
16
n
16
ASP
16
A
LYS
17
n
17
LYS
17
A
ILE
18
n
18
ILE
18
A
ALA
19
n
19
ALA
19
A
ASP
20
n
20
ASP
20
A
GLN
21
n
21
GLN
21
A
ILE
22
n
22
ILE
22
A
SER
23
n
23
SER
23
A
ASP
24
n
24
ASP
24
A
ALA
25
n
25
ALA
25
A
VAL
26
n
26
VAL
26
A
LEU
27
n
27
LEU
27
A
ASP
28
n
28
ASP
28
A
ALA
29
n
29
ALA
29
A
ILE
30
n
30
ILE
30
A
LEU
31
n
31
LEU
31
A
GLU
32
n
32
GLU
32
A
GLN
33
n
33
GLN
33
A
ASP
34
n
34
ASP
34
A
PRO
35
n
35
PRO
35
A
LYS
36
n
36
LYS
36
A
ALA
37
n
37
ALA
37
A
ARG
38
n
38
ARG
38
A
VAL
39
n
39
VAL
39
A
ALA
40
n
40
ALA
40
A
CYS
41
n
41
CYS
41
A
GLU
42
n
42
GLU
42
A
THR
43
n
43
THR
43
A
TYR
44
n
44
TYR
44
A
VAL
45
n
45
VAL
45
A
LYS
46
n
46
LYS
46
A
THR
47
n
47
THR
47
A
GLY
48
n
48
GLY
48
A
MET
49
n
49
MET
49
A
VAL
50
n
50
VAL
50
A
LEU
51
n
51
LEU
51
A
VAL
52
n
52
VAL
52
A
GLY
53
n
53
GLY
53
A
GLY
54
n
54
GLY
54
A
GLU
55
n
55
GLU
55
A
ILE
56
n
56
ILE
56
A
THR
57
n
57
THR
57
A
THR
58
n
58
THR
58
A
SER
59
n
59
SER
59
A
ALA
60
n
60
ALA
60
A
TRP
61
n
61
TRP
61
A
VAL
62
n
62
VAL
62
A
ASP
63
n
63
ASP
63
A
ILE
64
n
64
ILE
64
A
GLU
65
n
65
GLU
65
A
GLU
66
n
66
GLU
66
A
ILE
67
n
67
ILE
67
A
THR
68
n
68
THR
68
A
ARG
69
n
69
ARG
69
A
ASN
70
n
70
ASN
70
A
THR
71
n
71
THR
71
A
VAL
72
n
72
VAL
72
A
ARG
73
n
73
ARG
73
A
GLU
74
n
74
GLU
74
A
ILE
75
n
75
ILE
75
A
GLY
76
n
76
GLY
76
A
TYR
77
n
77
TYR
77
A
VAL
78
n
78
VAL
78
A
HIS
79
n
79
HIS
79
A
SER
80
n
80
SER
80
A
ASP
81
n
81
ASP
81
A
MET
82
n
82
MET
82
A
GLY
83
n
83
GLY
83
A
PHE
84
n
84
PHE
84
A
ASP
85
n
85
ASP
85
A
ALA
86
n
86
ALA
86
A
ASN
87
n
87
ASN
87
A
SER
88
n
88
SER
88
A
CYS
89
n
89
CYS
89
A
ALA
90
n
90
ALA
90
A
VAL
91
n
91
VAL
91
A
LEU
92
n
92
LEU
92
A
SER
93
n
93
SER
93
A
ALA
94
n
94
ALA
94
A
ILE
95
n
95
ILE
95
A
GLY
96
n
96
GLY
96
A
LYS
97
n
97
LYS
97
A
GLN
98
n
98
GLN
98
A
SER
99
n
99
SER
99
A
PRO
100
n
100
PRO
100
A
ASP
101
n
101
ASP
101
A
ILE
102
n
102
ILE
102
A
n
103
103
A
n
104
104
A
n
105
105
A
n
106
106
A
n
107
107
A
ARG
108
n
108
ARG
108
A
ALA
109
n
109
ALA
109
A
ASP
110
n
110
ASP
110
A
PRO
111
n
111
PRO
111
A
LEU
112
n
112
LEU
112
A
GLU
113
n
113
GLU
113
A
GLN
114
n
114
GLN
114
A
GLY
115
n
115
GLY
115
A
ALA
116
n
116
ALA
116
A
GLY
117
n
117
GLY
117
A
ASP
118
n
118
ASP
118
A
GLN
119
n
119
GLN
119
A
GLY
120
n
120
GLY
120
A
LEU
121
n
121
LEU
121
A
MET
122
n
122
MET
122
A
PHE
123
n
123
PHE
123
A
GLY
124
n
124
GLY
124
A
TYR
125
n
125
TYR
125
A
ALA
126
n
126
ALA
126
A
THR
127
n
127
THR
127
A
ASN
128
n
128
ASN
128
A
GLU
129
n
129
GLU
129
A
THR
130
n
130
THR
130
A
ASP
131
n
131
ASP
131
A
VAL
132
n
132
VAL
132
A
LEU
133
n
133
LEU
133
A
MET
134
n
134
MET
134
A
PRO
135
n
135
PRO
135
A
ALA
136
n
136
ALA
136
A
PRO
137
n
137
PRO
137
A
ILE
138
n
138
ILE
138
A
THR
139
n
139
THR
139
A
TYR
140
n
140
TYR
140
A
ALA
141
n
141
ALA
141
A
HIS
142
n
142
HIS
142
A
ARG
143
n
143
ARG
143
A
LEU
144
n
144
LEU
144
A
VAL
145
n
145
VAL
145
A
GLN
146
n
146
GLN
146
A
ARG
147
n
147
ARG
147
A
GLN
148
n
148
GLN
148
A
ALA
149
n
149
ALA
149
A
GLU
150
n
150
GLU
150
A
VAL
151
n
151
VAL
151
A
ARG
152
n
152
ARG
152
A
LYS
153
n
153
LYS
153
A
ASN
154
n
154
ASN
154
A
GLY
155
n
155
GLY
155
A
THR
156
n
156
THR
156
A
LEU
157
n
157
LEU
157
A
PRO
158
n
158
PRO
158
A
TRP
159
n
159
TRP
159
A
LEU
160
n
160
LEU
160
A
ARG
161
n
161
ARG
161
A
PRO
162
n
162
PRO
162
A
ASP
163
n
163
ASP
163
A
ALA
164
n
164
ALA
164
A
LYS
165
n
165
LYS
165
A
SER
166
n
166
SER
166
A
GLN
167
n
167
GLN
167
A
VAL
168
n
168
VAL
168
A
THR
169
n
169
THR
169
A
PHE
170
n
170
PHE
170
A
GLN
171
n
171
GLN
171
A
TYR
172
n
172
TYR
172
A
ASP
173
n
173
ASP
173
A
ASP
174
n
174
ASP
174
A
GLY
175
n
175
GLY
175
A
LYS
176
n
176
LYS
176
A
ILE
177
n
177
ILE
177
A
VAL
178
n
178
VAL
178
A
GLY
179
n
179
GLY
179
A
ILE
180
n
180
ILE
180
A
ASP
181
n
181
ASP
181
A
ALA
182
n
182
ALA
182
A
VAL
183
n
183
VAL
183
A
VAL
184
n
184
VAL
184
A
LEU
185
n
185
LEU
185
A
SER
186
n
186
SER
186
A
THR
187
n
187
THR
187
A
GLN
188
n
188
GLN
188
A
HIS
189
n
189
HIS
189
A
SER
190
n
190
SER
190
A
GLU
191
n
191
GLU
191
A
GLU
192
n
192
GLU
192
A
ILE
193
n
193
ILE
193
A
ASP
194
n
194
ASP
194
A
GLN
195
n
195
GLN
195
A
LYS
196
n
196
LYS
196
A
SER
197
n
197
SER
197
A
LEU
198
n
198
LEU
198
A
GLN
199
n
199
GLN
199
A
GLU
200
n
200
GLU
200
A
ALA
201
n
201
ALA
201
A
VAL
202
n
202
VAL
202
A
MET
203
n
203
MET
203
A
GLU
204
n
204
GLU
204
A
GLU
205
n
205
GLU
205
A
ILE
206
n
206
ILE
206
A
ILE
207
n
207
ILE
207
A
LYS
208
n
208
LYS
208
A
PRO
209
n
209
PRO
209
A
ILE
210
n
210
ILE
210
A
LEU
211
n
211
LEU
211
A
PRO
212
n
212
PRO
212
A
ALA
213
n
213
ALA
213
A
GLU
214
n
214
GLU
214
A
TRP
215
n
215
TRP
215
A
LEU
216
n
216
LEU
216
A
THR
217
n
217
THR
217
A
SER
218
n
218
SER
218
A
ALA
219
n
219
ALA
219
A
THR
220
n
220
THR
220
A
LYS
221
n
221
LYS
221
A
PHE
222
n
222
PHE
222
A
PHE
223
n
223
PHE
223
A
ILE
224
n
224
ILE
224
A
ASN
225
n
225
ASN
225
A
PRO
226
n
226
PRO
226
A
THR
227
n
227
THR
227
A
GLY
228
n
228
GLY
228
A
ARG
229
n
229
ARG
229
A
PHE
230
n
230
PHE
230
A
VAL
231
n
231
VAL
231
A
ILE
232
n
232
ILE
232
A
GLY
233
n
233
GLY
233
A
GLY
234
n
234
GLY
234
A
PRO
235
n
235
PRO
235
A
MET
236
n
236
MET
236
A
GLY
237
n
237
GLY
237
A
ASP
238
n
238
ASP
238
A
CYS
239
n
239
CYS
239
A
GLY
240
n
240
GLY
240
A
LEU
241
n
241
LEU
241
A
THR
242
n
242
THR
242
A
GLY
243
n
243
GLY
243
A
ARG
244
n
244
ARG
244
A
LYS
245
n
245
LYS
245
A
ILE
246
n
246
ILE
246
A
ILE
247
n
247
ILE
247
A
VAL
248
n
248
VAL
248
A
ASP
249
n
249
ASP
249
A
THR
250
n
250
THR
250
A
TYR
251
n
251
TYR
251
A
GLY
252
n
252
GLY
252
A
GLY
253
n
253
GLY
253
A
MET
254
n
254
MET
254
A
ALA
255
n
255
ALA
255
A
ARG
256
n
256
ARG
256
A
HIS
257
n
257
HIS
257
A
GLY
258
n
258
GLY
258
A
GLY
259
n
259
GLY
259
A
GLY
260
n
260
GLY
260
A
ALA
261
n
261
ALA
261
A
PHE
262
n
262
PHE
262
A
SER
263
n
263
SER
263
A
GLY
264
n
264
GLY
264
A
LYS
265
n
265
LYS
265
A
ASP
266
n
266
ASP
266
A
PRO
267
n
267
PRO
267
A
SER
268
n
268
SER
268
A
LYS
269
n
269
LYS
269
A
VAL
270
n
270
VAL
270
A
ASP
271
n
271
ASP
271
A
ARG
272
n
272
ARG
272
A
SER
273
n
273
SER
273
A
ALA
274
n
274
ALA
274
A
ALA
275
n
275
ALA
275
A
TYR
276
n
276
TYR
276
A
ALA
277
n
277
ALA
277
A
ALA
278
n
278
ALA
278
A
ARG
279
n
279
ARG
279
A
TYR
280
n
280
TYR
280
A
VAL
281
n
281
VAL
281
A
ALA
282
n
282
ALA
282
A
LYS
283
n
283
LYS
283
A
ASN
284
n
284
ASN
284
A
ILE
285
n
285
ILE
285
A
VAL
286
n
286
VAL
286
A
ALA
287
n
287
ALA
287
A
ALA
288
n
288
ALA
288
A
GLY
289
n
289
GLY
289
A
LEU
290
n
290
LEU
290
A
ALA
291
n
291
ALA
291
A
ASP
292
n
292
ASP
292
A
ARG
293
n
293
ARG
293
A
CYS
294
n
294
CYS
294
A
GLU
295
n
295
GLU
295
A
ILE
296
n
296
ILE
296
A
GLN
297
n
297
GLN
297
A
VAL
298
n
298
VAL
298
A
SER
299
n
299
SER
299
A
TYR
300
n
300
TYR
300
A
ALA
301
n
301
ALA
301
A
ILE
302
n
302
ILE
302
A
GLY
303
n
303
GLY
303
A
VAL
304
n
304
VAL
304
A
ALA
305
n
305
ALA
305
A
GLU
306
n
306
GLU
306
A
PRO
307
n
307
PRO
307
A
THR
308
n
308
THR
308
A
SER
309
n
309
SER
309
A
ILE
310
n
310
ILE
310
A
MET
311
n
311
MET
311
A
VAL
312
n
312
VAL
312
A
GLU
313
n
313
GLU
313
A
THR
314
n
314
THR
314
A
PHE
315
n
315
PHE
315
A
GLY
316
n
316
GLY
316
A
THR
317
n
317
THR
317
A
GLU
318
n
318
GLU
318
A
LYS
319
n
319
LYS
319
A
VAL
320
n
320
VAL
320
A
PRO
321
n
321
PRO
321
A
SER
322
n
322
SER
322
A
GLU
323
n
323
GLU
323
A
GLN
324
n
324
GLN
324
A
LEU
325
n
325
LEU
325
A
THR
326
n
326
THR
326
A
LEU
327
n
327
LEU
327
A
LEU
328
n
328
LEU
328
A
VAL
329
n
329
VAL
329
A
ARG
330
n
330
ARG
330
A
GLU
331
n
331
GLU
331
A
PHE
332
n
332
PHE
332
A
PHE
333
n
333
PHE
333
A
ASP
334
n
334
ASP
334
A
LEU
335
n
335
LEU
335
A
ARG
336
n
336
ARG
336
A
PRO
337
n
337
PRO
337
A
TYR
338
n
338
TYR
338
A
GLY
339
n
339
GLY
339
A
LEU
340
n
340
LEU
340
A
ILE
341
n
341
ILE
341
A
GLN
342
n
342
GLN
342
A
MET
343
n
343
MET
343
A
LEU
344
n
344
LEU
344
A
ASP
345
n
345
ASP
345
A
LEU
346
n
346
LEU
346
A
LEU
347
n
347
LEU
347
A
HIS
348
n
348
HIS
348
A
PRO
349
n
349
PRO
349
A
ILE
350
n
350
ILE
350
A
TYR
351
n
351
TYR
351
A
LYS
352
n
352
LYS
352
A
GLU
353
n
353
GLU
353
A
THR
354
n
354
THR
354
A
ALA
355
n
355
ALA
355
A
ALA
356
n
356
ALA
356
A
TYR
357
n
357
TYR
357
A
GLY
358
n
358
GLY
358
A
HIS
359
n
359
HIS
359
A
PHE
360
n
360
PHE
360
A
GLY
361
n
361
GLY
361
A
ARG
362
n
362
ARG
362
A
GLU
363
n
363
GLU
363
A
HIS
364
n
364
HIS
364
A
PHE
365
n
365
PHE
365
A
PRO
366
n
366
PRO
366
A
TRP
367
n
367
TRP
367
A
GLU
368
n
368
GLU
368
A
LYS
369
n
369
LYS
369
A
THR
370
n
370
THR
370
A
ASP
371
n
371
ASP
371
A
LYS
372
n
372
LYS
372
A
ALA
373
n
373
ALA
373
A
GLN
374
n
374
GLN
374
A
LEU
375
n
375
LEU
375
A
LEU
376
n
376
LEU
376
A
ARG
377
n
377
ARG
377
A
ASP
378
n
378
ASP
378
A
ALA
379
n
379
ALA
379
A
ALA
380
n
380
ALA
380
A
GLY
381
n
381
GLY
381
A
LEU
382
n
382
LEU
382
A
LYS
383
n
383
LYS
383
A
author_and_software_defined_assembly
PISA,PQS
2
dimeric
software_defined_assembly
PISA
4
tetrameric
7840
-87
24720
19180
-200
45930
A
ASP
16
A
OD2
ASP
16
9_555
A
MG
412
D
MG
MG
1_555
A
ASP
16
A
OD1
ASP
16
9_555
55.6
A
ASP
16
A
OD2
ASP
16
9_555
A
MG
412
D
MG
MG
1_555
A
PO4
384
B
O2
PO4
1_555
97.7
A
ASP
16
A
OD1
ASP
16
9_555
A
MG
412
D
MG
MG
1_555
A
PO4
384
B
O2
PO4
1_555
129.9
A
ASP
16
A
OD2
ASP
16
9_555
A
MG
412
D
MG
MG
1_555
A
ADP
385
G
O1A
ADP
1_555
120.3
A
ASP
16
A
OD1
ASP
16
9_555
A
MG
412
D
MG
MG
1_555
A
ADP
385
G
O1A
ADP
1_555
154.9
A
PO4
384
B
O2
PO4
1_555
A
MG
412
D
MG
MG
1_555
A
ADP
385
G
O1A
ADP
1_555
73.7
A
ASP
16
A
OD2
ASP
16
9_555
A
MG
412
D
MG
MG
1_555
A
ADP
385
G
O3B
ADP
1_555
63.3
A
ASP
16
A
OD1
ASP
16
9_555
A
MG
412
D
MG
MG
1_555
A
ADP
385
G
O3B
ADP
1_555
117.1
A
PO4
384
B
O2
PO4
1_555
A
MG
412
D
MG
MG
1_555
A
ADP
385
G
O3B
ADP
1_555
68.8
A
ADP
385
G
O1A
ADP
1_555
A
MG
412
D
MG
MG
1_555
A
ADP
385
G
O3B
ADP
1_555
58.6
A
GLU
42
A
OE1
GLU
42
1_555
A
K
413
E
K
K
1_555
A
GLU
42
A
OE2
GLU
42
1_555
43.0
A
GLU
42
A
OE1
GLU
42
1_555
A
K
413
E
K
K
1_555
A
SER
263
A
O
SER
263
1_555
130.0
A
GLU
42
A
OE2
GLU
42
1_555
A
K
413
E
K
K
1_555
A
SER
263
A
O
SER
263
1_555
172.3
A
GLY
243
A
O
GLY
243
1_555
A
K
414
F
K
K
1_555
A
GLY
243
A
O
GLY
243
9_555
110.5
A
ASP
271
A
OD1
ASP
271
1_555
A
MG
411
C
MG
MG
1_555
A
ASP
271
A
OD2
ASP
271
1_555
56.3
A
ASP
271
A
OD1
ASP
271
1_555
A
MG
411
C
MG
MG
1_555
A
PO4
384
B
O4
PO4
1_555
113.5
A
ASP
271
A
OD2
ASP
271
1_555
A
MG
411
C
MG
MG
1_555
A
PO4
384
B
O4
PO4
1_555
100.6
A
ASP
271
A
OD1
ASP
271
1_555
A
MG
411
C
MG
MG
1_555
A
ADP
385
G
O2B
ADP
1_555
171.5
A
ASP
271
A
OD2
ASP
271
1_555
A
MG
411
C
MG
MG
1_555
A
ADP
385
G
O2B
ADP
1_555
127.5
A
PO4
384
B
O4
PO4
1_555
A
MG
411
C
MG
MG
1_555
A
ADP
385
G
O2B
ADP
1_555
74.2
A
ASP
271
A
OD1
ASP
271
1_555
A
MG
411
C
MG
MG
1_555
A
ADP
385
G
O2A
ADP
1_555
123.8
A
ASP
271
A
OD2
ASP
271
1_555
A
MG
411
C
MG
MG
1_555
A
ADP
385
G
O2A
ADP
1_555
69.1
A
PO4
384
B
O4
PO4
1_555
A
MG
411
C
MG
MG
1_555
A
ADP
385
G
O2A
ADP
1_555
62.5
A
ADP
385
G
O2B
ADP
1_555
A
MG
411
C
MG
MG
1_555
A
ADP
385
G
O2A
ADP
1_555
62.3
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
-0.8660254038
0.0000000000
-0.8660254038
0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
9_555
-x,-x+y,-z+1/3
crystal symmetry operation
0.0000000000
0.0000000000
46.6000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
4_565
-x,-y+1,z
crystal symmetry operation
-64.4500000000
111.6306745478
0.0000000000
0.5000000000
0.8660254038
0.0000000000
0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
12_565
x,x-y+1,-z+1/3
crystal symmetry operation
-64.4500000000
111.6306745478
46.6000000000
A
O
HIS
3
A
O
HIS
3
A
N
TYR
172
A
N
TYR
172
A
O
LYS
165
A
O
LYS
165
A
N
SER
186
A
N
SER
186
A
O
VAL
183
A
O
VAL
183
A
N
LYS
221
A
N
LYS
221
A
O
ARG
38
A
O
ARG
38
A
N
THR
57
A
N
THR
57
A
O
VAL
50
A
O
VAL
50
A
N
ALA
90
A
N
ALA
90
A
O
GLY
120
A
O
GLY
120
A
N
TYR
300
A
N
TYR
300
A
O
GLU
295
A
O
GLU
295
A
N
GLU
313
A
N
GLU
313
A
O
GLN
171
A
O
GLN
171
A
N
GLY
179
A
N
GLY
179
1
A
K
414
F
K
1
A
CA
ILE
102
A
CA
ILE
102
1
Y
1
A
C
ILE
102
A
C
ILE
102
1
Y
1
A
O
ILE
102
A
O
ILE
102
1
Y
1
A
CB
ILE
102
A
CB
ILE
102
1
Y
1
A
CG1
ILE
102
A
CG1
ILE
102
1
Y
1
A
CG2
ILE
102
A
CG2
ILE
102
1
Y
1
A
CD1
ILE
102
A
CD1
ILE
102
1
Y
1
A
ASN
103
A
ASN
103
1
Y
1
A
GLN
104
A
GLN
104
1
Y
1
A
GLY
105
A
GLY
105
1
Y
1
A
VAL
106
A
VAL
106
1
Y
1
A
ASP
107
A
ASP
107
1
Y
1
A
A
GLY
MET
48
49
-147.39
1
A
A
ASP
ASP
173
174
-121.97
1
A
A
THR
GLY
227
228
-120.16
1
A
A
GLY
ARG
228
229
128.66
1
A
A
GLY
GLY
259
260
-128.05
1
A
TYR
140
0.152
SIDE CHAIN
1
A
ARG
244
0.120
SIDE CHAIN
1
A
TYR
276
0.080
SIDE CHAIN
1
A
TYR
280
0.064
SIDE CHAIN
1
A
ARG
336
0.098
SIDE CHAIN
1
A
TYR
357
0.077
SIDE CHAIN
1
6.80
0.90
118.30
125.10
A
A
A
CB
CG
OD1
ASP
ASP
ASP
16
16
16
N
1
6.55
0.80
106.30
112.85
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
61
61
61
N
1
-5.93
0.80
107.30
101.37
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
61
61
61
N
1
6.54
0.80
106.30
112.84
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
159
159
159
N
1
-6.18
0.80
107.30
101.12
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
159
159
159
N
1
6.40
0.80
106.30
112.70
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
215
215
215
N
1
-5.42
0.80
107.30
101.88
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
215
215
215
N
1
-14.59
1.90
110.30
95.71
A
A
A
N
CA
CB
THR
THR
THR
250
250
250
N
1
11.33
1.40
112.40
123.73
A
A
A
CA
CB
CG2
THR
THR
THR
250
250
250
N
1
7.89
0.90
118.30
126.19
A
A
A
CB
CG
OD1
ASP
ASP
ASP
271
271
271
N
1
-4.89
0.50
120.30
115.41
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
336
336
336
N
1
14.99
2.30
115.30
130.29
A
A
A
CA
CB
CG
LEU
LEU
LEU
340
340
340
N
1
3.53
0.50
120.30
123.83
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
362
362
362
N
1
-3.33
0.50
120.30
116.97
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
362
362
362
N
1
5.77
0.80
106.30
112.07
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
367
367
367
N
1
-5.50
0.80
107.30
101.80
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
367
367
367
N
1
-3.74
0.50
120.30
116.56
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
377
377
377
N
1
A
A
NE2
CD2
HIS
HIS
3
3
-0.068
0.011
1.373
1.305
N
1
A
A
NE2
CD2
HIS
HIS
79
79
-0.070
0.011
1.373
1.303
N
1
A
A
NE2
CD2
HIS
HIS
142
142
-0.068
0.011
1.373
1.305
N
1
A
A
NE2
CD2
HIS
HIS
189
189
-0.075
0.011
1.373
1.298
N
1
A
A
NE2
CD2
HIS
HIS
257
257
-0.081
0.011
1.373
1.292
N
1
A
A
NE2
CD2
HIS
HIS
348
348
-0.076
0.011
1.373
1.297
N
1
A
A
NE2
CD2
HIS
HIS
359
359
-0.068
0.011
1.373
1.305
N
1
A
A
NE2
CD2
HIS
HIS
364
364
-0.079
0.011
1.373
1.294
N
1
A
ALA
60
-49.34
158.85
1
A
ASP
118
71.88
147.30
1
A
ILE
206
-102.63
-63.22
1
A
ASN
225
34.28
56.63
1
A
ASP
238
-123.66
-158.81
1
A
LYS
245
-89.63
42.50
1
A
THR
250
-66.45
-90.17
1
A
TYR
251
-158.13
20.44
1
A
GLU
331
-101.57
-60.53
1
A
ASP
345
35.71
72.21
1
A
PRO
349
-65.13
81.47
1
A
TYR
357
81.25
4.14
1
A
GLU
363
-30.21
-24.59
1
A
ASP
378
-55.67
-70.99
1
A
LEU
382
-39.18
137.12
31.8
RESIDUES 102 - 107 WERE NOT FOUND DUE TO HIGH
TEMPERATURE FACTORS.
0.2590000
0.1940000
0.1940000
2.8
10.0
16033
10.00
94.4
1
0.0
MOLECULAR REPLACEMENT
MAT ITSELF
2.8
10.0
0
2935
36
0
2899
0.010
3.04
25.5
2.46
2.8
10.0
1MXB
16033
0.0
0.0530000
1
5.0
94.4
0.2200000
2.8
3.0
2.8
1
2.0
87.1
model building
X-PLOR
3.1
refinement
X-PLOR
3.1
data scaling
KUAVST
data scaling
KUMDS
phasing
X-PLOR
3.1
S-ADENOSYLMETHIONINE SYNTHETASE WITH ADP
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
4
N
N
5
N
N
A
PRO
15
A
PRO
15
HELX_P
A
GLN
33
A
GLN
33
1
1
19
A
ILE
64
A
ILE
64
HELX_P
A
ILE
75
A
ILE
75
1
2
12
A
SER
80
A
SER
80
HELX_P
A
MET
82
A
MET
82
5
3
3
A
PRO
111
A
PRO
111
HELX_P
A
GLU
113
A
GLU
113
5
4
3
A
ALA
136
A
ALA
136
HELX_P
A
LYS
153
A
LYS
153
1
5
18
A
GLN
195
A
GLN
195
HELX_P
A
GLU
205
A
GLU
205
1
6
11
A
ALA
213
A
ALA
213
HELX_P
A
TRP
215
A
TRP
215
5
7
3
A
ILE
246
A
ILE
246
HELX_P
A
THR
250
A
THR
250
1
8
5
A
VAL
270
A
VAL
270
HELX_P
A
ALA
287
A
ALA
287
1
9
18
A
SER
322
A
SER
322
HELX_P
A
PHE
332
A
PHE
332
1
10
11
A
PRO
337
A
PRO
337
HELX_P
A
MET
343
A
MET
343
1
11
7
A
LYS
352
A
LYS
352
HELX_P
A
ALA
355
A
ALA
355
5
12
4
A
PRO
366
A
PRO
366
HELX_P
A
GLU
368
A
GLU
368
5
13
3
A
ALA
373
A
ALA
373
HELX_P
A
ALA
379
A
ALA
379
1
14
7
metalc
2.190
A
ASP
16
A
OD2
ASP
16
9_555
A
MG
412
D
MG
MG
1_555
metalc
2.215
A
ASP
16
A
OD1
ASP
16
9_555
A
MG
412
D
MG
MG
1_555
metalc
2.652
A
GLU
42
A
OE1
GLU
42
1_555
A
K
413
E
K
K
1_555
metalc
3.004
A
GLU
42
A
OE2
GLU
42
1_555
A
K
413
E
K
K
1_555
metalc
2.514
A
GLY
243
A
O
GLY
243
1_555
A
K
414
F
K
K
1_555
metalc
2.515
A
GLY
243
A
O
GLY
243
9_555
A
K
414
F
K
K
1_555
metalc
2.618
A
SER
263
A
O
SER
263
1_555
A
K
413
E
K
K
1_555
metalc
2.189
A
ASP
271
A
OD1
ASP
271
1_555
A
MG
411
C
MG
MG
1_555
metalc
2.146
A
ASP
271
A
OD2
ASP
271
1_555
A
MG
411
C
MG
MG
1_555
metalc
2.247
A
PO4
384
B
O4
PO4
1_555
A
MG
411
C
MG
MG
1_555
metalc
2.007
A
PO4
384
B
O2
PO4
1_555
A
MG
412
D
MG
MG
1_555
metalc
2.120
A
ADP
385
G
O2B
ADP
1_555
A
MG
411
C
MG
MG
1_555
metalc
2.994
A
ADP
385
G
O2A
ADP
1_555
A
MG
411
C
MG
MG
1_555
metalc
2.139
A
ADP
385
G
O1A
ADP
1_555
A
MG
412
D
MG
MG
1_555
metalc
2.897
A
ADP
385
G
O3B
ADP
1_555
A
MG
412
D
MG
MG
1_555
TRANSFERASE
TRANSFERASE, ONE-CARBON METABOLISM, ATP-BINDING
METK_ECOLI
UNP
1
1
P0A817
MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVH
SDMGFDANSCAVLSAIGKQSPDINQGVDRADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPW
LRPDAKSQVTFQYDDGKIVGIDAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDC
GLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEK
VPSEQLTLLVREFFDLRPYGLIQMLDLLHPIYKETAAYGHFGREHFPWEKTDKAQLLRDAAGLK
2
384
1MXB
1
383
P0A817
A
1
1
383
4
3
3
2
anti-parallel
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
A
HIS
3
A
HIS
3
A
VAL
10
A
VAL
10
A
ALA
164
A
ALA
164
A
TYR
172
A
TYR
172
A
ALA
182
A
ALA
182
A
THR
187
A
THR
187
A
LYS
221
A
LYS
221
A
ILE
224
A
ILE
224
A
ARG
38
A
ARG
38
A
LYS
46
A
LYS
46
A
MET
49
A
MET
49
A
THR
57
A
THR
57
A
ALA
90
A
ALA
90
A
GLN
98
A
GLN
98
A
GLY
120
A
GLY
120
A
THR
127
A
THR
127
A
ARG
293
A
ARG
293
A
TYR
300
A
TYR
300
A
SER
309
A
SER
309
A
THR
314
A
THR
314
A
PHE
170
A
PHE
170
A
ASP
173
A
ASP
173
A
LYS
176
A
LYS
176
A
ILE
180
A
ILE
180
BINDING SITE FOR RESIDUE PO4 A 384
A
PO4
384
Software
10
BINDING SITE FOR RESIDUE MG A 411
A
MG
411
Software
3
BINDING SITE FOR RESIDUE MG A 412
A
MG
412
Software
3
BINDING SITE FOR RESIDUE K A 413
A
K
413
Software
3
BINDING SITE FOR RESIDUE K A 414
A
K
414
Software
4
BINDING SITE FOR RESIDUE ADP A 385
A
ADP
385
Software
16
A
ASP
16
A
ASP
16
10
9_555
A
ARG
244
A
ARG
244
10
9_555
A
LYS
245
A
LYS
245
10
9_555
A
GLY
260
A
GLY
260
10
1_555
A
ALA
261
A
ALA
261
10
1_555
A
LYS
265
A
LYS
265
10
1_555
A
ASP
271
A
ASP
271
10
1_555
A
ADP
385
G
ADP
10
1_555
A
MG
411
C
MG
10
1_555
A
MG
412
D
MG
10
1_555
A
ASP
271
A
ASP
271
3
1_555
A
PO4
384
B
PO4
3
1_555
A
ADP
385
G
ADP
3
1_555
A
ASP
16
A
ASP
16
3
9_555
A
PO4
384
B
PO4
3
1_555
A
ADP
385
G
ADP
3
1_555
A
GLU
42
A
GLU
42
3
1_555
A
SER
263
A
SER
263
3
1_555
A
LYS
265
A
LYS
265
3
1_555
A
GLY
243
A
GLY
243
4
1_555
A
GLY
243
A
GLY
243
4
9_555
A
ILE
246
A
ILE
246
4
9_555
A
ILE
246
A
ILE
246
4
1_555
A
HIS
14
A
HIS
14
16
9_555
A
ASP
16
A
ASP
16
16
9_555
A
ARG
38
A
ARG
38
16
1_555
A
ALA
40
A
ALA
40
16
1_555
A
GLU
55
A
GLU
55
16
1_555
A
GLN
98
A
GLN
98
16
1_555
A
ASP
118
A
ASP
118
16
1_555
A
LYS
165
A
LYS
165
16
9_555
A
GLY
237
A
GLY
237
16
9_555
A
LYS
245
A
LYS
245
16
9_555
A
LYS
265
A
LYS
265
16
1_555
A
LYS
269
A
LYS
269
16
1_555
A
ASP
271
A
ASP
271
16
1_555
A
PO4
384
B
PO4
16
1_555
A
MG
411
C
MG
16
1_555
A
MG
412
D
MG
16
1_555
180
P 62 2 2