0.017861 0.000000 0.000000 0.000000 0.013321 0.000000 0.000000 0.000000 0.009197 0.00000 0.00000 0.00000 Huxford, T. Mishler, D. Phelps, C.B. Huang, D.-B. Sengchanthalangsy, L.L. Reeves, R. Hughes, C.A. Komives, E.A. Ghosh, G. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 16 90.00 90.00 90.00 55.988 75.072 108.733 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 R C N 309 N O N 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N N Y 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N C N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C Y 353 N C Y 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C N 359 N O N 360 N O N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N N N 373 S C N 374 N C N 375 N O N 376 N C N 377 N C N 378 N C N 379 N O N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N sing Y 326 N doub N 327 N sing Y 328 N doub N 329 N sing Y 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N doub N 350 N sing Y 351 N doub N 352 N sing Y 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing UK J.Mol.Biol. JMOBAK 0070 0022-2836 324 587 597 10.1016/S0022-2836(02)01149-X 12460563 Solvent exposed non-contacting amino acids play a critical role in NF-kappaB/IkappaB alpha complex formation 2002 10.2210/pdb1my7/pdb pdb_00001my7 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2001-11-25 SBC-2 SINGLE WAVELENGTH M x-ray 1 1.000 1.0 19-ID APS 1.000 SYNCHROTRON APS BEAMLINE 19-ID 13244.971 NF-kappaB p65 (RelA) subunit residues 191 - 304 (dimerization domain) N202R 2 man polymer 18.015 water 271 nat water no no TAELKICRVNRRSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSM QLRRPSDRELSEPMEFQYLPDTDDRHRIEEKRKR TAELKICRVNRRSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSM QLRRPSDRELSEPMEFQYLPDTDDRHRIEEKRKR A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n house mouse Mus Escherichia Escherichia coli sample RELA 10090 Mus musculus 469008 Escherichia coli BL21(DE3) BL21(DE3) PLASMID pET11a 1 2.16 42.96 VAPOR DIFFUSION, HANGING DROP 7.5 0.l M sodium HEPES, 0.2 M sodium tartrate, 2 M ammonium sulfate, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K 291 database_2 struct_ref_seq_dif chem_comp_atom chem_comp_bond pdbx_initial_refinement_model repository Initial release Version format compliance Version format compliance Database references Data collection Refinement description 1 0 2002-12-04 1 1 2008-04-28 1 2 2011-07-13 1 3 2021-10-27 1 4 2024-02-14 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details NF-kappaB p65 subunit dimerization domain homodimer NF-kappaB p65 subunit dimerization domain homodimer RCSB Y RCSB 2002-10-03 REL HOH water 1BFT pdb id 1bft PDB experimental model TIP 301 2 HOH HOH 305 A TIP 304 2 HOH HOH 306 A TIP 305 2 HOH HOH 307 A TIP 307 2 HOH HOH 308 A TIP 308 2 HOH HOH 309 A TIP 310 2 HOH HOH 310 A TIP 312 2 HOH HOH 311 A TIP 314 2 HOH HOH 312 A TIP 315 2 HOH HOH 313 A TIP 317 2 HOH HOH 314 A TIP 318 2 HOH HOH 315 A TIP 320 2 HOH HOH 316 A TIP 324 2 HOH HOH 317 A TIP 325 2 HOH HOH 318 A TIP 326 2 HOH HOH 319 A TIP 327 2 HOH HOH 320 A TIP 328 2 HOH HOH 321 A TIP 330 2 HOH HOH 322 A TIP 331 2 HOH HOH 323 A TIP 332 2 HOH HOH 324 A TIP 333 2 HOH HOH 325 A TIP 335 2 HOH HOH 326 A TIP 339 2 HOH HOH 327 A TIP 340 2 HOH HOH 328 A TIP 341 2 HOH HOH 329 A TIP 342 2 HOH HOH 330 A TIP 343 2 HOH HOH 331 A TIP 350 2 HOH HOH 332 A TIP 351 2 HOH HOH 333 A TIP 352 2 HOH HOH 334 A TIP 355 2 HOH HOH 335 A TIP 356 2 HOH HOH 336 A TIP 357 2 HOH HOH 337 A TIP 359 2 HOH HOH 338 A TIP 362 2 HOH HOH 339 A TIP 363 2 HOH HOH 340 A TIP 365 2 HOH HOH 341 A TIP 369 2 HOH HOH 342 A TIP 370 2 HOH HOH 343 A TIP 371 2 HOH HOH 344 A TIP 378 2 HOH HOH 345 A TIP 379 2 HOH HOH 346 A TIP 383 2 HOH HOH 347 A TIP 384 2 HOH HOH 348 A TIP 386 2 HOH HOH 349 A TIP 389 2 HOH HOH 350 A TIP 391 2 HOH HOH 351 A TIP 393 2 HOH HOH 352 A TIP 394 2 HOH HOH 353 A TIP 395 2 HOH HOH 354 A TIP 396 2 HOH HOH 355 A TIP 398 2 HOH HOH 356 A TIP 399 2 HOH HOH 357 A TIP 402 2 HOH HOH 358 A TIP 406 2 HOH HOH 359 A TIP 407 2 HOH HOH 360 A TIP 408 2 HOH HOH 361 A TIP 409 2 HOH HOH 362 A TIP 410 2 HOH HOH 363 A TIP 415 2 HOH HOH 364 A TIP 417 2 HOH HOH 365 A TIP 419 2 HOH HOH 366 A TIP 420 2 HOH HOH 367 A TIP 424 2 HOH HOH 368 A TIP 425 2 HOH HOH 369 A TIP 427 2 HOH HOH 370 A TIP 428 2 HOH HOH 371 A TIP 431 2 HOH HOH 372 A TIP 435 2 HOH HOH 373 A TIP 437 2 HOH HOH 374 A TIP 438 2 HOH HOH 375 A TIP 441 2 HOH HOH 376 A TIP 442 2 HOH HOH 377 A TIP 443 2 HOH HOH 378 A TIP 446 2 HOH HOH 379 A TIP 447 2 HOH HOH 380 A TIP 449 2 HOH HOH 381 A TIP 450 2 HOH HOH 382 A TIP 451 2 HOH HOH 383 A TIP 452 2 HOH HOH 384 A TIP 453 2 HOH HOH 385 A TIP 454 2 HOH HOH 386 A TIP 455 2 HOH HOH 387 A TIP 457 2 HOH HOH 388 A TIP 458 2 HOH HOH 389 A TIP 460 2 HOH HOH 390 A TIP 461 2 HOH HOH 391 A TIP 462 2 HOH HOH 392 A TIP 464 2 HOH HOH 393 A TIP 466 2 HOH HOH 394 A TIP 467 2 HOH HOH 395 A TIP 468 2 HOH HOH 396 A TIP 469 2 HOH HOH 397 A TIP 471 2 HOH HOH 398 A TIP 473 2 HOH HOH 399 A TIP 474 2 HOH HOH 400 A TIP 476 2 HOH HOH 401 A TIP 477 2 HOH HOH 402 A TIP 482 2 HOH HOH 403 A TIP 484 2 HOH HOH 404 A TIP 488 2 HOH HOH 405 A TIP 489 2 HOH HOH 406 A TIP 490 2 HOH HOH 407 A TIP 491 2 HOH HOH 408 A TIP 493 2 HOH HOH 409 A TIP 494 2 HOH HOH 410 A TIP 496 2 HOH HOH 411 A TIP 499 2 HOH HOH 412 A TIP 500 2 HOH HOH 413 A TIP 502 2 HOH HOH 414 A TIP 504 2 HOH HOH 415 A TIP 508 2 HOH HOH 416 A TIP 509 2 HOH HOH 417 A TIP 510 2 HOH HOH 418 A TIP 518 2 HOH HOH 419 A TIP 521 2 HOH HOH 420 A TIP 525 2 HOH HOH 421 A TIP 526 2 HOH HOH 422 A TIP 527 2 HOH HOH 423 A TIP 528 2 HOH HOH 424 A TIP 534 2 HOH HOH 425 A TIP 535 2 HOH HOH 426 A TIP 537 2 HOH HOH 427 A TIP 538 2 HOH HOH 428 A TIP 541 2 HOH HOH 429 A TIP 545 2 HOH HOH 430 A TIP 546 2 HOH HOH 431 A TIP 548 2 HOH HOH 432 A TIP 549 2 HOH HOH 433 A TIP 550 2 HOH HOH 434 A TIP 551 2 HOH HOH 435 A TIP 552 2 HOH HOH 436 A TIP 553 2 HOH HOH 437 A TIP 554 2 HOH HOH 438 A TIP 556 2 HOH HOH 439 A TIP 557 2 HOH HOH 440 A TIP 558 2 HOH HOH 441 A TIP 559 2 HOH HOH 442 A TIP 561 2 HOH HOH 443 A TIP 563 2 HOH HOH 444 A TIP 567 2 HOH HOH 445 A TIP 569 2 HOH HOH 446 A TIP 300 2 HOH HOH 305 B TIP 302 2 HOH HOH 306 B TIP 303 2 HOH HOH 307 B TIP 306 2 HOH HOH 308 B TIP 309 2 HOH HOH 309 B TIP 311 2 HOH HOH 310 B TIP 313 2 HOH HOH 311 B TIP 316 2 HOH HOH 312 B TIP 319 2 HOH HOH 313 B TIP 321 2 HOH HOH 314 B TIP 322 2 HOH HOH 315 B TIP 323 2 HOH HOH 316 B TIP 329 2 HOH HOH 317 B TIP 334 2 HOH HOH 318 B TIP 336 2 HOH HOH 319 B TIP 337 2 HOH HOH 320 B TIP 338 2 HOH HOH 321 B TIP 344 2 HOH HOH 322 B TIP 345 2 HOH HOH 323 B TIP 346 2 HOH HOH 324 B TIP 347 2 HOH HOH 325 B TIP 348 2 HOH HOH 326 B TIP 349 2 HOH HOH 327 B TIP 353 2 HOH HOH 328 B TIP 354 2 HOH HOH 329 B TIP 358 2 HOH HOH 330 B TIP 360 2 HOH HOH 331 B TIP 361 2 HOH HOH 332 B TIP 364 2 HOH HOH 333 B TIP 366 2 HOH HOH 334 B TIP 367 2 HOH HOH 335 B TIP 368 2 HOH HOH 336 B TIP 372 2 HOH HOH 337 B TIP 373 2 HOH HOH 338 B TIP 374 2 HOH HOH 339 B TIP 375 2 HOH HOH 340 B TIP 376 2 HOH HOH 341 B TIP 377 2 HOH HOH 342 B TIP 380 2 HOH HOH 343 B TIP 381 2 HOH HOH 344 B TIP 382 2 HOH HOH 345 B TIP 385 2 HOH HOH 346 B TIP 387 2 HOH HOH 347 B TIP 388 2 HOH HOH 348 B TIP 390 2 HOH HOH 349 B TIP 392 2 HOH HOH 350 B TIP 397 2 HOH HOH 351 B TIP 400 2 HOH HOH 352 B TIP 401 2 HOH HOH 353 B TIP 403 2 HOH HOH 354 B TIP 404 2 HOH HOH 355 B TIP 405 2 HOH HOH 356 B TIP 411 2 HOH HOH 357 B TIP 412 2 HOH HOH 358 B TIP 413 2 HOH HOH 359 B TIP 414 2 HOH HOH 360 B TIP 416 2 HOH HOH 361 B TIP 418 2 HOH HOH 362 B TIP 421 2 HOH HOH 363 B TIP 422 2 HOH HOH 364 B TIP 423 2 HOH HOH 365 B TIP 426 2 HOH HOH 366 B TIP 429 2 HOH HOH 367 B TIP 430 2 HOH HOH 368 B TIP 432 2 HOH HOH 369 B TIP 433 2 HOH HOH 370 B TIP 434 2 HOH HOH 371 B TIP 436 2 HOH HOH 372 B TIP 439 2 HOH HOH 373 B TIP 440 2 HOH HOH 374 B TIP 444 2 HOH HOH 375 B TIP 445 2 HOH HOH 376 B TIP 448 2 HOH HOH 377 B TIP 456 2 HOH HOH 378 B TIP 459 2 HOH HOH 379 B TIP 463 2 HOH HOH 380 B TIP 465 2 HOH HOH 381 B TIP 470 2 HOH HOH 382 B TIP 472 2 HOH HOH 383 B TIP 475 2 HOH HOH 384 B TIP 478 2 HOH HOH 385 B TIP 479 2 HOH HOH 386 B TIP 480 2 HOH HOH 387 B TIP 481 2 HOH HOH 388 B TIP 483 2 HOH HOH 389 B TIP 485 2 HOH HOH 390 B TIP 486 2 HOH HOH 391 B TIP 487 2 HOH HOH 392 B TIP 492 2 HOH HOH 393 B TIP 495 2 HOH HOH 394 B TIP 497 2 HOH HOH 395 B TIP 498 2 HOH HOH 396 B TIP 501 2 HOH HOH 397 B TIP 503 2 HOH HOH 398 B TIP 505 2 HOH HOH 399 B TIP 506 2 HOH HOH 400 B TIP 507 2 HOH HOH 401 B TIP 511 2 HOH HOH 402 B TIP 512 2 HOH HOH 403 B TIP 513 2 HOH HOH 404 B TIP 514 2 HOH HOH 405 B TIP 515 2 HOH HOH 406 B TIP 516 2 HOH HOH 407 B TIP 517 2 HOH HOH 408 B TIP 519 2 HOH HOH 409 B TIP 520 2 HOH HOH 410 B TIP 522 2 HOH HOH 411 B TIP 523 2 HOH HOH 412 B TIP 524 2 HOH HOH 413 B TIP 529 2 HOH HOH 414 B TIP 530 2 HOH HOH 415 B TIP 531 2 HOH HOH 416 B TIP 532 2 HOH HOH 417 B TIP 533 2 HOH HOH 418 B TIP 536 2 HOH HOH 419 B TIP 539 2 HOH HOH 420 B TIP 540 2 HOH HOH 421 B TIP 542 2 HOH HOH 422 B TIP 543 2 HOH HOH 423 B TIP 544 2 HOH HOH 424 B TIP 547 2 HOH HOH 425 B TIP 555 2 HOH HOH 426 B TIP 560 2 HOH HOH 427 B TIP 562 2 HOH HOH 428 B TIP 564 2 HOH HOH 429 B TIP 565 2 HOH HOH 430 B TIP 566 2 HOH HOH 431 B TIP 568 2 HOH HOH 432 B TIP 570 2 HOH HOH 433 B THR 191 n 1 THR 191 A ALA 192 n 2 ALA 192 A GLU 193 n 3 GLU 193 A LEU 194 n 4 LEU 194 A LYS 195 n 5 LYS 195 A ILE 196 n 6 ILE 196 A CYS 197 n 7 CYS 197 A ARG 198 n 8 ARG 198 A VAL 199 n 9 VAL 199 A ASN 200 n 10 ASN 200 A ARG 201 n 11 ARG 201 A ARG 202 n 12 ARG 202 A SER 203 n 13 SER 203 A GLY 204 n 14 GLY 204 A SER 205 n 15 SER 205 A CYS 206 n 16 CYS 206 A LEU 207 n 17 LEU 207 A GLY 208 n 18 GLY 208 A GLY 209 n 19 GLY 209 A ASP 210 n 20 ASP 210 A GLU 211 n 21 GLU 211 A ILE 212 n 22 ILE 212 A PHE 213 n 23 PHE 213 A LEU 214 n 24 LEU 214 A LEU 215 n 25 LEU 215 A CYS 216 n 26 CYS 216 A ASP 217 n 27 ASP 217 A LYS 218 n 28 LYS 218 A VAL 219 n 29 VAL 219 A GLN 220 n 30 GLN 220 A LYS 221 n 31 LYS 221 A GLU 222 n 32 GLU 222 A ASP 223 n 33 ASP 223 A ILE 224 n 34 ILE 224 A GLU 225 n 35 GLU 225 A VAL 226 n 36 VAL 226 A TYR 227 n 37 TYR 227 A PHE 228 n 38 PHE 228 A THR 229 n 39 THR 229 A GLY 230 n 40 GLY 230 A PRO 231 n 41 PRO 231 A GLY 232 n 42 GLY 232 A TRP 233 n 43 TRP 233 A GLU 234 n 44 GLU 234 A ALA 235 n 45 ALA 235 A ARG 236 n 46 ARG 236 A GLY 237 n 47 GLY 237 A SER 238 n 48 SER 238 A PHE 239 n 49 PHE 239 A SER 240 n 50 SER 240 A GLN 241 n 51 GLN 241 A ALA 242 n 52 ALA 242 A ASP 243 n 53 ASP 243 A VAL 244 n 54 VAL 244 A HIS 245 n 55 HIS 245 A ARG 246 n 56 ARG 246 A GLN 247 n 57 GLN 247 A VAL 248 n 58 VAL 248 A ALA 249 n 59 ALA 249 A ILE 250 n 60 ILE 250 A VAL 251 n 61 VAL 251 A PHE 252 n 62 PHE 252 A ARG 253 n 63 ARG 253 A THR 254 n 64 THR 254 A PRO 255 n 65 PRO 255 A PRO 256 n 66 PRO 256 A TYR 257 n 67 TYR 257 A ALA 258 n 68 ALA 258 A ASP 259 n 69 ASP 259 A PRO 260 n 70 PRO 260 A SER 261 n 71 SER 261 A LEU 262 n 72 LEU 262 A GLN 263 n 73 GLN 263 A ALA 264 n 74 ALA 264 A PRO 265 n 75 PRO 265 A VAL 266 n 76 VAL 266 A ARG 267 n 77 ARG 267 A VAL 268 n 78 VAL 268 A SER 269 n 79 SER 269 A MET 270 n 80 MET 270 A GLN 271 n 81 GLN 271 A LEU 272 n 82 LEU 272 A ARG 273 n 83 ARG 273 A ARG 274 n 84 ARG 274 A PRO 275 n 85 PRO 275 A SER 276 n 86 SER 276 A ASP 277 n 87 ASP 277 A ARG 278 n 88 ARG 278 A GLU 279 n 89 GLU 279 A LEU 280 n 90 LEU 280 A SER 281 n 91 SER 281 A GLU 282 n 92 GLU 282 A PRO 283 n 93 PRO 283 A MET 284 n 94 MET 284 A GLU 285 n 95 GLU 285 A PHE 286 n 96 PHE 286 A GLN 287 n 97 GLN 287 A TYR 288 n 98 TYR 288 A LEU 289 n 99 LEU 289 A PRO 290 n 100 PRO 290 A ASP 291 n 101 ASP 291 A THR 292 n 102 THR 292 A ASP 293 n 103 ASP 293 A ALA 294 n 104 ASP 294 A ARG 295 n 105 ARG 295 A HIS 296 n 106 HIS 296 A ARG 297 n 107 ARG 297 A n 108 298 A n 109 299 A n 110 300 A n 111 301 A n 112 302 A n 113 303 A n 114 304 A THR 191 n 1 THR 191 B ALA 192 n 2 ALA 192 B GLU 193 n 3 GLU 193 B LEU 194 n 4 LEU 194 B LYS 195 n 5 LYS 195 B ILE 196 n 6 ILE 196 B CYS 197 n 7 CYS 197 B ARG 198 n 8 ARG 198 B VAL 199 n 9 VAL 199 B ASN 200 n 10 ASN 200 B ARG 201 n 11 ARG 201 B ARG 202 n 12 ARG 202 B SER 203 n 13 SER 203 B GLY 204 n 14 GLY 204 B SER 205 n 15 SER 205 B CYS 206 n 16 CYS 206 B LEU 207 n 17 LEU 207 B GLY 208 n 18 GLY 208 B GLY 209 n 19 GLY 209 B ASP 210 n 20 ASP 210 B GLU 211 n 21 GLU 211 B ILE 212 n 22 ILE 212 B PHE 213 n 23 PHE 213 B LEU 214 n 24 LEU 214 B LEU 215 n 25 LEU 215 B CYS 216 n 26 CYS 216 B ASP 217 n 27 ASP 217 B LYS 218 n 28 LYS 218 B VAL 219 n 29 VAL 219 B GLN 220 n 30 GLN 220 B LYS 221 n 31 LYS 221 B GLU 222 n 32 GLU 222 B ASP 223 n 33 ASP 223 B ILE 224 n 34 ILE 224 B GLU 225 n 35 GLU 225 B VAL 226 n 36 VAL 226 B TYR 227 n 37 TYR 227 B PHE 228 n 38 PHE 228 B THR 229 n 39 THR 229 B GLY 230 n 40 GLY 230 B PRO 231 n 41 PRO 231 B GLY 232 n 42 GLY 232 B TRP 233 n 43 TRP 233 B GLU 234 n 44 GLU 234 B ALA 235 n 45 ALA 235 B ARG 236 n 46 ARG 236 B GLY 237 n 47 GLY 237 B SER 238 n 48 SER 238 B PHE 239 n 49 PHE 239 B SER 240 n 50 SER 240 B GLN 241 n 51 GLN 241 B ALA 242 n 52 ALA 242 B ASP 243 n 53 ASP 243 B VAL 244 n 54 VAL 244 B HIS 245 n 55 HIS 245 B ARG 246 n 56 ARG 246 B GLN 247 n 57 GLN 247 B VAL 248 n 58 VAL 248 B ALA 249 n 59 ALA 249 B ILE 250 n 60 ILE 250 B VAL 251 n 61 VAL 251 B PHE 252 n 62 PHE 252 B ARG 253 n 63 ARG 253 B THR 254 n 64 THR 254 B PRO 255 n 65 PRO 255 B PRO 256 n 66 PRO 256 B TYR 257 n 67 TYR 257 B ALA 258 n 68 ALA 258 B ASP 259 n 69 ASP 259 B PRO 260 n 70 PRO 260 B SER 261 n 71 SER 261 B LEU 262 n 72 LEU 262 B GLN 263 n 73 GLN 263 B ALA 264 n 74 ALA 264 B PRO 265 n 75 PRO 265 B VAL 266 n 76 VAL 266 B ARG 267 n 77 ARG 267 B VAL 268 n 78 VAL 268 B SER 269 n 79 SER 269 B MET 270 n 80 MET 270 B GLN 271 n 81 GLN 271 B LEU 272 n 82 LEU 272 B ARG 273 n 83 ARG 273 B ARG 274 n 84 ARG 274 B PRO 275 n 85 PRO 275 B SER 276 n 86 SER 276 B ASP 277 n 87 ASP 277 B ARG 278 n 88 ARG 278 B GLU 279 n 89 GLU 279 B LEU 280 n 90 LEU 280 B SER 281 n 91 SER 281 B GLU 282 n 92 GLU 282 B PRO 283 n 93 PRO 283 B MET 284 n 94 MET 284 B GLU 285 n 95 GLU 285 B PHE 286 n 96 PHE 286 B GLN 287 n 97 GLN 287 B TYR 288 n 98 TYR 288 B LEU 289 n 99 LEU 289 B PRO 290 n 100 PRO 290 B ASP 291 n 101 ASP 291 B THR 292 n 102 THR 292 B n 103 293 B n 104 294 B n 105 295 B n 106 296 B n 107 297 B n 108 298 B n 109 299 B n 110 300 B n 111 301 B n 112 302 B n 113 303 B n 114 304 B author_and_software_defined_assembly PISA 2 dimeric 1290 -7 11630 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ARG 198 A N ARG 8 A O LEU 215 A O LEU 25 A N ILE 212 A N ILE 22 A O PHE 252 A O PHE 62 A N GLY 204 A N GLY 14 A O LEU 289 A O LEU 99 A O PHE 286 A O PHE 96 A N VAL 268 A N VAL 78 A O GLN 271 A O GLN 81 A N TYR 227 A N TYR 37 A N PHE 228 A N PHE 38 A O ALA 235 A O ALA 45 A N GLY 204 A N GLY 14 A O LEU 289 A O LEU 99 A O PHE 286 A O PHE 96 A N VAL 268 A N VAL 78 A N ARG 274 A N ARG 84 A O GLU 279 A O GLU 89 B N ARG 198 B N ARG 8 B O LEU 215 B O LEU 25 B N ILE 212 B N ILE 22 B O PHE 252 B O PHE 62 B O ALA 249 B O ALA 59 B N HIS 245 B N HIS 55 B N GLY 204 B N GLY 14 B O LEU 289 B O LEU 99 B O PHE 286 B O PHE 96 B N VAL 268 B N VAL 78 B O GLN 271 B O GLN 81 B N TYR 227 B N TYR 37 B N GLY 230 B N GLY 40 B O TRP 233 B O TRP 43 B N GLY 204 B N GLY 14 B O LEU 289 B O LEU 99 B O PHE 286 B O PHE 96 B N VAL 268 B N VAL 78 B N ARG 274 B N ARG 84 B O GLU 279 B O GLU 89 1 A HOH 361 C HOH 1 B HOH 324 D HOH 1 B HOH 391 D HOH 1 A CG ASP 294 A CG ASP 104 1 Y 1 A OD1 ASP 294 A OD1 ASP 104 1 Y 1 A OD2 ASP 294 A OD2 ASP 104 1 Y 1 A ILE 298 A ILE 108 1 Y 1 A GLU 299 A GLU 109 1 Y 1 A GLU 300 A GLU 110 1 Y 1 A LYS 301 A LYS 111 1 Y 1 A ARG 302 A ARG 112 1 Y 1 A LYS 303 A LYS 113 1 Y 1 A ARG 304 A ARG 114 1 Y 1 B ASP 293 B ASP 103 1 Y 1 B ASP 294 B ASP 104 1 Y 1 B ARG 295 B ARG 105 1 Y 1 B HIS 296 B HIS 106 1 Y 1 B ARG 297 B ARG 107 1 Y 1 B ILE 298 B ILE 108 1 Y 1 B GLU 299 B GLU 109 1 Y 1 B GLU 300 B GLU 110 1 Y 1 B LYS 301 B LYS 111 1 Y 1 B ARG 302 B ARG 112 1 Y 1 B LYS 303 B LYS 113 1 Y 1 B ARG 304 B ARG 114 1 Y 1 B B N O ALA HOH 235 399 2.03 1 B B N O THR HOH 191 367 2.14 1 B B O O PHE HOH 228 399 2.18 1 B B N O CYS HOH 206 421 2.19 1 B B OD1 O ASP HOH 243 367 2.09 1_555 8_556 1 A GLU 193 -105.53 -73.91 1 A GLN 247 62.24 -0.93 1 B ALA 192 62.92 -171.67 1 B LYS 218 -39.83 125.67 1 B ASP 223 -141.01 55.76 0.247 0.233 0.247 0.247 1.49 30.0 3339 37805 33670 89.1 random 1 THROUGHOUT 2.0 MOLECULAR REPLACEMENT pdb id 1bft Engh & Huber 1.49 30.0 271 1944 0 0 1673 0.005 1.43 1.49 30.0 1MY7 39447 36240 2.5 2.5 0.054 1 13.9 10.2 91.8 1.49 1.54 2.5 0.327 82.7 data collection HKL-2000 data scaling SCALEPACK phasing AMoRE refinement CNS data reduction HKL-2000 NF-kappaB p65 subunit dimerization domain homodimer N202R mutation 1 N N 1 N N 2 N N 2 N N A SER 240 A SER 50 HELX_P A VAL 244 A VAL 54 5 1 5 B SER 240 B SER 50 HELX_P B ALA 242 B ALA 52 5 2 3 TRANSCRIPTION Immunoglobulin, Ig, beta-sandwich, beta-sheet, homodimerDNA-binding, Transcription regulation, Activator, Nuclear protein, Phosphorylation, TRANSCRIPTION TF65_MOUSE UNP 1 191 Q04207 TAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSM QLRRPSDRELSEPMEFQYLPDTDDRHRIEEKRKR 191 304 1MY7 191 304 Q04207 A 1 1 114 191 304 1MY7 191 304 Q04207 B 1 1 114 1 ASN engineered mutation ARG 202 1MY7 A Q04207 UNP 202 12 2 ASN engineered mutation ARG 202 1MY7 B Q04207 UNP 202 12 3 5 4 4 5 4 anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel A ILE 196 A ILE 6 A VAL 199 A VAL 9 A GLU 211 A GLU 21 A CYS 216 A CYS 26 A ALA 249 A ALA 59 A ARG 253 A ARG 63 A SER 203 A SER 13 A SER 205 A SER 15 A MET 284 A MET 94 A LEU 289 A LEU 99 A VAL 266 A VAL 76 A ARG 274 A ARG 84 A GLU 225 A GLU 35 A GLY 230 A GLY 40 A TRP 233 A TRP 43 A ARG 236 A ARG 46 A SER 203 A SER 13 A SER 205 A SER 15 A MET 284 A MET 94 A LEU 289 A LEU 99 A VAL 266 A VAL 76 A ARG 274 A ARG 84 A GLU 279 A GLU 89 A LEU 280 A LEU 90 B ILE 196 B ILE 6 B VAL 199 B VAL 9 B GLU 211 B GLU 21 B CYS 216 B CYS 26 B ALA 249 B ALA 59 B ARG 253 B ARG 63 B VAL 244 B VAL 54 B HIS 245 B HIS 55 B SER 203 B SER 13 B SER 205 B SER 15 B MET 284 B MET 94 B LEU 289 B LEU 99 B VAL 266 B VAL 76 B ARG 274 B ARG 84 B GLU 225 B GLU 35 B GLY 230 B GLY 40 B TRP 233 B TRP 43 B ARG 236 B ARG 46 B SER 203 B SER 13 B SER 205 B SER 15 B MET 284 B MET 94 B LEU 289 B LEU 99 B VAL 266 B VAL 76 B ARG 274 B ARG 84 B GLU 279 B GLU 89 B LEU 280 B LEU 90 20 C 2 2 21