0.031781 0.000000 0.000000 0.000000 0.012795 0.000000 0.000000 0.000000 0.011958 0.00000 0.00000 0.00000 Hink-Schauer, C. Estebanez-Perpina, E. Wilharm, E. Fuentes-Prior, P. Klinkert, W. Bode, W. Jenne, D.E. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 31.465 78.158 83.629 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 R C N 309 N O N 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N N Y 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N C N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C Y 353 N C Y 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C N 359 N O N 360 N O N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N N N 373 S C N 374 N C N 375 N O N 376 N C N 377 N C N 378 N C N 379 N O N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N sing Y 326 N doub N 327 N sing Y 328 N doub N 329 N sing Y 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N doub N 350 N sing Y 351 N doub N 352 N sing Y 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing US J.BIOL.CHEM. JBCHA3 0071 0021-9258 277 50923 50933 10.1074/jbc.M207962200 12384499 The 2.2-A Crystal Structure of Human Pro-granzyme K Reveals a Rigid Zymogen with Unusual Features 2002 10.2210/pdb1mza/pdb pdb_00001mza 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 IMAGE PLATE 2001-01-12 MARRESEARCH CuK alpha SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU 26134.189 pro-granzyme K 3.4.21.- S195A 1 man polymer 18.015 water 138 nat water granzyme K, granzyme 3, NK-tryptase-2 no no MEIIGGKEVSPHSRPFMASIQYGGHHVCGGVLIDPQWVLTAAHCQYRFTKGQSPTVVLGAHSLSKNEASKQTLEIKKFIP FSRVTSDPQSNDIMLVKLQTAAKLNKHVKMLHIRSKTSLRSGTKCKVTGWGATDPDSLRPSDTLREVTVTVLSRKLCNSQ SYYNGDPFITKDMVCAGDAKGQKDSCKGDAGGPLICKGVFHAIVSGGHECGVATKPGIYTLLTKKYQTWIKSNLVPPHTN MEIIGGKEVSPHSRPFMASIQYGGHHVCGGVLIDPQWVLTAAHCQYRFTKGQSPTVVLGAHSLSKNEASKQTLEIKKFIP FSRVTSDPQSNDIMLVKLQTAAKLNKHVKMLHIRSKTSLRSGTKCKVTGWGATDPDSLRPSDTLREVTVTVLSRKLCNSQ SYYNGDPFITKDMVCAGDAKGQKDSCKGDAGGPLICKGVFHAIVSGGHECGVATKPGIYTLLTKKYQTWIKSNLVPPHTN A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo bone marrow Escherichia sample 9606 Homo sapiens 562 Escherichia coli B834 (DE3) plasmid pET24c+ 1 1.97 37.45 VAPOR DIFFUSION, SITTING DROP 8.4 1.6M sodium formate, 2.5mM 2-[N-morpholino]ethane-sulfonic acid, 50mM sodium chloride, pH 8.4, VAPOR DIFFUSION, SITTING DROP, temperature 291K 291 database_2 struct_ref_seq_dif chem_comp_atom chem_comp_bond pdbx_initial_refinement_model repository Initial release Version format compliance Version format compliance Database references Data collection Refinement description 1 0 2003-01-14 1 1 2008-04-28 1 2 2011-07-13 1 3 2021-11-10 1 4 2024-04-03 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details 1MZD contains granzyme K at 2.9A RCSB Y PDBJ 2002-10-07 REL REL HOH water 1FQ3 granzyme B PDB experimental model TIP 1 2 HOH HOH 249 A TIP 2 2 HOH HOH 250 A TIP 3 2 HOH HOH 251 A TIP 4 2 HOH HOH 252 A TIP 5 2 HOH HOH 253 A TIP 6 2 HOH HOH 254 A TIP 7 2 HOH HOH 255 A TIP 8 2 HOH HOH 256 A TIP 9 2 HOH HOH 257 A TIP 10 2 HOH HOH 258 A TIP 11 2 HOH HOH 259 A TIP 12 2 HOH HOH 260 A TIP 13 2 HOH HOH 261 A TIP 14 2 HOH HOH 262 A TIP 15 2 HOH HOH 263 A TIP 16 2 HOH HOH 264 A TIP 17 2 HOH HOH 265 A TIP 18 2 HOH HOH 266 A TIP 19 2 HOH HOH 267 A TIP 20 2 HOH HOH 268 A TIP 21 2 HOH HOH 269 A TIP 22 2 HOH HOH 270 A TIP 23 2 HOH HOH 271 A TIP 24 2 HOH HOH 272 A TIP 25 2 HOH HOH 273 A TIP 26 2 HOH HOH 274 A TIP 27 2 HOH HOH 275 A TIP 28 2 HOH HOH 276 A TIP 29 2 HOH HOH 277 A TIP 30 2 HOH HOH 278 A TIP 31 2 HOH HOH 279 A TIP 32 2 HOH HOH 280 A TIP 33 2 HOH HOH 281 A TIP 34 2 HOH HOH 282 A TIP 35 2 HOH HOH 283 A TIP 36 2 HOH HOH 284 A TIP 37 2 HOH HOH 285 A TIP 38 2 HOH HOH 286 A TIP 39 2 HOH HOH 287 A TIP 40 2 HOH HOH 288 A TIP 41 2 HOH HOH 289 A TIP 42 2 HOH HOH 290 A TIP 43 2 HOH HOH 291 A TIP 44 2 HOH HOH 292 A TIP 45 2 HOH HOH 293 A TIP 46 2 HOH HOH 294 A TIP 47 2 HOH HOH 295 A TIP 48 2 HOH HOH 296 A TIP 49 2 HOH HOH 297 A TIP 50 2 HOH HOH 298 A TIP 51 2 HOH HOH 299 A TIP 52 2 HOH HOH 300 A TIP 53 2 HOH HOH 301 A TIP 54 2 HOH HOH 302 A TIP 55 2 HOH HOH 303 A TIP 56 2 HOH HOH 304 A TIP 57 2 HOH HOH 305 A TIP 58 2 HOH HOH 306 A TIP 59 2 HOH HOH 307 A TIP 60 2 HOH HOH 308 A TIP 61 2 HOH HOH 309 A TIP 62 2 HOH HOH 310 A TIP 63 2 HOH HOH 311 A TIP 64 2 HOH HOH 312 A TIP 65 2 HOH HOH 313 A TIP 66 2 HOH HOH 314 A TIP 67 2 HOH HOH 315 A TIP 68 2 HOH HOH 316 A TIP 69 2 HOH HOH 317 A TIP 70 2 HOH HOH 318 A TIP 71 2 HOH HOH 319 A TIP 72 2 HOH HOH 320 A TIP 73 2 HOH HOH 321 A TIP 74 2 HOH HOH 322 A TIP 75 2 HOH HOH 323 A TIP 76 2 HOH HOH 324 A TIP 77 2 HOH HOH 325 A TIP 78 2 HOH HOH 326 A TIP 79 2 HOH HOH 327 A TIP 80 2 HOH HOH 328 A TIP 81 2 HOH HOH 329 A TIP 82 2 HOH HOH 330 A TIP 83 2 HOH HOH 331 A TIP 84 2 HOH HOH 332 A TIP 85 2 HOH HOH 333 A TIP 86 2 HOH HOH 334 A TIP 87 2 HOH HOH 335 A TIP 88 2 HOH HOH 336 A TIP 89 2 HOH HOH 337 A TIP 90 2 HOH HOH 338 A TIP 91 2 HOH HOH 339 A TIP 92 2 HOH HOH 340 A TIP 93 2 HOH HOH 341 A TIP 94 2 HOH HOH 342 A TIP 95 2 HOH HOH 343 A TIP 96 2 HOH HOH 344 A TIP 97 2 HOH HOH 345 A TIP 98 2 HOH HOH 346 A TIP 99 2 HOH HOH 347 A TIP 100 2 HOH HOH 348 A TIP 101 2 HOH HOH 349 A TIP 102 2 HOH HOH 350 A TIP 103 2 HOH HOH 351 A TIP 104 2 HOH HOH 352 A TIP 105 2 HOH HOH 353 A TIP 106 2 HOH HOH 354 A TIP 107 2 HOH HOH 355 A TIP 108 2 HOH HOH 356 A TIP 109 2 HOH HOH 357 A TIP 110 2 HOH HOH 358 A TIP 111 2 HOH HOH 359 A TIP 112 2 HOH HOH 360 A TIP 113 2 HOH HOH 361 A TIP 114 2 HOH HOH 362 A TIP 115 2 HOH HOH 363 A TIP 116 2 HOH HOH 364 A TIP 117 2 HOH HOH 365 A TIP 118 2 HOH HOH 366 A TIP 119 2 HOH HOH 367 A TIP 120 2 HOH HOH 368 A TIP 121 2 HOH HOH 369 A TIP 122 2 HOH HOH 370 A TIP 123 2 HOH HOH 371 A TIP 124 2 HOH HOH 372 A TIP 125 2 HOH HOH 373 A TIP 126 2 HOH HOH 374 A TIP 127 2 HOH HOH 375 A TIP 128 2 HOH HOH 376 A TIP 129 2 HOH HOH 377 A TIP 130 2 HOH HOH 378 A TIP 131 2 HOH HOH 379 A TIP 132 2 HOH HOH 380 A TIP 133 2 HOH HOH 381 A TIP 134 2 HOH HOH 382 A TIP 135 2 HOH HOH 383 A TIP 136 2 HOH HOH 384 A TIP 137 2 HOH HOH 385 A TIP 138 2 HOH HOH 386 A MET 14 n 1 MET 14 A GLU 15 n 2 GLU 15 A ILE 16 n 3 ILE 16 A ILE 17 n 4 ILE 17 A GLY 18 n 5 GLY 18 A GLY 19 n 6 GLY 19 A LYS 20 n 7 LYS 20 A GLU 21 n 8 GLU 21 A VAL 22 n 9 VAL 22 A SER 23 n 10 SER 23 A PRO 24 n 11 PRO 24 A HIS 25 n 12 HIS 25 A SER 26 n 13 SER 26 A ARG 27 n 14 ARG 27 A PRO 28 n 15 PRO 28 A PHE 29 n 16 PHE 29 A MET 30 n 17 MET 30 A ALA 31 n 18 ALA 31 A SER 32 n 19 SER 32 A ILE 33 n 20 ILE 33 A GLN 34 n 21 GLN 34 A TYR 35 n 22 TYR 35 A GLY 37 n 23 GLY 37 A GLY 38 n 24 GLY 38 A HIS 39 n 25 HIS 39 A HIS 40 n 26 HIS 40 A VAL 41 n 27 VAL 41 A CYS 42 n 28 CYS 42 A GLY 43 n 29 GLY 43 A GLY 44 n 30 GLY 44 A VAL 45 n 31 VAL 45 A LEU 46 n 32 LEU 46 A ILE 47 n 33 ILE 47 A ASP 48 n 34 ASP 48 A PRO 49 n 35 PRO 49 A GLN 50 n 36 GLN 50 A TRP 51 n 37 TRP 51 A VAL 52 n 38 VAL 52 A LEU 53 n 39 LEU 53 A THR 54 n 40 THR 54 A ALA 55 n 41 ALA 55 A ALA 56 n 42 ALA 56 A HIS 57 n 43 HIS 57 A CYS 58 n 44 CYS 58 A GLN 59 n 45 GLN 59 A TYR 60 n 46 TYR 60 A ARG 60 n 47 A ARG 60 A PHE 60 n 48 B PHE 60 A THR 60 n 49 C THR 60 A LYS 60 n 50 D LYS 60 A GLY 61 n 51 GLY 61 A GLN 62 n 52 GLN 62 A SER 63 n 53 SER 63 A PRO 64 n 54 PRO 64 A THR 65 n 55 THR 65 A VAL 66 n 56 VAL 66 A VAL 67 n 57 VAL 67 A LEU 68 n 58 LEU 68 A GLY 69 n 59 GLY 69 A ALA 70 n 60 ALA 70 A HIS 71 n 61 HIS 71 A SER 72 n 62 SER 72 A LEU 73 n 63 LEU 73 A SER 74 n 64 SER 74 A LYS 75 n 65 LYS 75 A ASN 76 n 66 ASN 76 A GLU 77 n 67 GLU 77 A ALA 78 n 68 ALA 78 A SER 79 n 69 SER 79 A LYS 80 n 70 LYS 80 A GLN 81 n 71 GLN 81 A THR 82 n 72 THR 82 A LEU 83 n 73 LEU 83 A GLU 84 n 74 GLU 84 A ILE 85 n 75 ILE 85 A LYS 86 n 76 LYS 86 A LYS 87 n 77 LYS 87 A PHE 88 n 78 PHE 88 A ILE 89 n 79 ILE 89 A PRO 90 n 80 PRO 90 A PHE 91 n 81 PHE 91 A SER 92 n 82 SER 92 A ARG 93 n 83 ARG 93 A VAL 94 n 84 VAL 94 A THR 95 n 85 THR 95 A SER 96 n 86 SER 96 A ASP 97 n 87 ASP 97 A PRO 98 n 88 PRO 98 A GLN 99 n 89 GLN 99 A SER 100 n 90 SER 100 A ASN 101 n 91 ASN 101 A ASP 102 n 92 ASP 102 A ILE 103 n 93 ILE 103 A MET 104 n 94 MET 104 A LEU 105 n 95 LEU 105 A VAL 106 n 96 VAL 106 A LYS 107 n 97 LYS 107 A LEU 108 n 98 LEU 108 A GLN 109 n 99 GLN 109 A THR 110 n 100 THR 110 A ALA 111 n 101 ALA 111 A ALA 112 n 102 ALA 112 A LYS 113 n 103 LYS 113 A LEU 114 n 104 LEU 114 A ASN 115 n 105 ASN 115 A LYS 116 n 106 LYS 116 A HIS 117 n 107 HIS 117 A VAL 118 n 108 VAL 118 A LYS 119 n 109 LYS 119 A MET 120 n 110 MET 120 A LEU 121 n 111 LEU 121 A HIS 122 n 112 HIS 122 A ILE 123 n 113 ILE 123 A ARG 124 n 114 ARG 124 A SER 125 n 115 SER 125 A LYS 126 n 116 LYS 126 A THR 128 n 117 THR 128 A SER 129 n 118 SER 129 A LEU 130 n 119 LEU 130 A ARG 131 n 120 ARG 131 A SER 132 n 121 SER 132 A GLY 133 n 122 GLY 133 A THR 134 n 123 THR 134 A LYS 135 n 124 LYS 135 A CYS 136 n 125 CYS 136 A LYS 137 n 126 LYS 137 A VAL 138 n 127 VAL 138 A THR 139 n 128 THR 139 A GLY 140 n 129 GLY 140 A TRP 141 n 130 TRP 141 A GLY 142 n 131 GLY 142 A ALA 143 n 132 ALA 143 A THR 144 n 133 THR 144 A ASP 145 n 134 ASP 145 A PRO 146 n 135 PRO 146 A ASP 147 n 136 ASP 147 A SER 148 n 137 SER 148 A LEU 148 n 138 A LEU 148 A ARG 149 n 139 ARG 149 A PRO 151 n 140 PRO 151 A SER 152 n 141 SER 152 A ASP 153 n 142 ASP 153 A THR 154 n 143 THR 154 A LEU 155 n 144 LEU 155 A ARG 156 n 145 ARG 156 A GLU 157 n 146 GLU 157 A VAL 158 n 147 VAL 158 A THR 159 n 148 THR 159 A VAL 160 n 149 VAL 160 A THR 161 n 150 THR 161 A VAL 162 n 151 VAL 162 A LEU 163 n 152 LEU 163 A SER 164 n 153 SER 164 A ARG 165 n 154 ARG 165 A LYS 166 n 155 LYS 166 A LEU 167 n 156 LEU 167 A CYS 168 n 157 CYS 168 A ASN 169 n 158 ASN 169 A SER 170 n 159 SER 170 A GLN 170 n 160 A GLN 170 A SER 170 n 161 B SER 170 A TYR 171 n 162 TYR 171 A TYR 172 n 163 TYR 172 A ASN 173 n 164 ASN 173 A GLY 173 n 165 A GLY 173 A ASP 173 n 166 B ASP 173 A PRO 174 n 167 PRO 174 A PHE 175 n 168 PHE 175 A ILE 176 n 169 ILE 176 A THR 177 n 170 THR 177 A LYS 178 n 171 LYS 178 A ASP 179 n 172 ASP 179 A MET 180 n 173 MET 180 A VAL 181 n 174 VAL 181 A CYS 182 n 175 CYS 182 A ALA 183 n 176 ALA 183 A GLY 184 n 177 GLY 184 A ASP 185 n 178 ASP 185 A ALA 186 n 179 ALA 186 A LYS 187 n 180 LYS 187 A GLY 188 n 181 GLY 188 A GLN 188 n 182 A GLN 188 A LYS 188 n 183 B LYS 188 A ASP 189 n 184 ASP 189 A SER 190 n 185 SER 190 A CYS 191 n 186 CYS 191 A LYS 192 n 187 LYS 192 A GLY 193 n 188 GLY 193 A ASP 194 n 189 ASP 194 A ALA 195 n 190 ALA 195 A GLY 196 n 191 GLY 196 A GLY 197 n 192 GLY 197 A PRO 198 n 193 PRO 198 A LEU 199 n 194 LEU 199 A ILE 200 n 195 ILE 200 A CYS 201 n 196 CYS 201 A LYS 202 n 197 LYS 202 A GLY 207 n 198 GLY 207 A VAL 208 n 199 VAL 208 A PHE 209 n 200 PHE 209 A HIS 210 n 201 HIS 210 A ALA 211 n 202 ALA 211 A ILE 212 n 203 ILE 212 A VAL 213 n 204 VAL 213 A SER 214 n 205 SER 214 A GLY 215 n 206 GLY 215 A GLY 216 n 207 GLY 216 A HIS 217 n 208 HIS 217 A GLU 219 n 209 GLU 219 A CYS 220 n 210 CYS 220 A GLY 221 n 211 GLY 221 A VAL 222 n 212 VAL 222 A ALA 223 n 213 ALA 223 A THR 223 n 214 A THR 223 A LYS 224 n 215 LYS 224 A PRO 225 n 216 PRO 225 A GLY 226 n 217 GLY 226 A ILE 227 n 218 ILE 227 A TYR 228 n 219 TYR 228 A THR 229 n 220 THR 229 A LEU 230 n 221 LEU 230 A LEU 231 n 222 LEU 231 A THR 232 n 223 THR 232 A LYS 232 n 224 A LYS 232 A LYS 233 n 225 LYS 233 A TYR 234 n 226 TYR 234 A GLN 235 n 227 GLN 235 A THR 236 n 228 THR 236 A TRP 237 n 229 TRP 237 A ILE 238 n 230 ILE 238 A LYS 239 n 231 LYS 239 A SER 240 n 232 SER 240 A ASN 241 n 233 ASN 241 A LEU 242 n 234 LEU 242 A VAL 243 n 235 VAL 243 A PRO 244 n 236 PRO 244 A PRO 245 n 237 PRO 245 A HIS 246 n 238 HIS 246 A THR 247 n 239 THR 247 A ASN 248 n 240 ASN 248 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O LYS 20 A O LYS 7 A N GLU 157 A N GLU 146 A N VAL 160 A N VAL 149 A O CYS 136 A O CYS 125 A N THR 139 A N THR 128 A O PRO 198 A O PRO 193 A N CYS 201 A N CYS 196 A O VAL 208 A O VAL 199 A O ILE 212 A O ILE 203 A N THR 229 A N THR 220 A N TYR 228 A N TYR 219 A O VAL 181 A O VAL 174 A O GLY 184 A O GLY 177 A N THR 161 A N THR 150 A N TYR 35 A N TYR 22 A O HIS 39 A O HIS 25 A O ASP 48 A O ASP 34 A N TRP 51 A N TRP 37 A O THR 54 A O THR 40 A N MET 104 A N MET 94 A O LYS 107 A O LYS 97 A N LYS 86 A N LYS 76 A N ILE 85 A N ILE 75 A O PRO 64 A O PRO 54 A O VAL 67 A O VAL 57 A N SER 32 A N SER 19 1 A N GLY 18 A N GLY 5 0 Y 1 A CA GLY 18 A CA GLY 5 0 Y 1 A CG LYS 20 A CG LYS 7 0 Y 1 A CD LYS 20 A CD LYS 7 0 Y 1 A CE LYS 20 A CE LYS 7 0 Y 1 A NZ LYS 20 A NZ LYS 7 0 Y A 1 A NE ARG 60 A NE ARG 47 0 Y A 1 A CZ ARG 60 A CZ ARG 47 0 Y A 1 A NH1 ARG 60 A NH1 ARG 47 0 Y A 1 A NH2 ARG 60 A NH2 ARG 47 0 Y D 1 A CB LYS 60 A CB LYS 50 0 Y D 1 A CG LYS 60 A CG LYS 50 0 Y D 1 A CD LYS 60 A CD LYS 50 0 Y D 1 A CE LYS 60 A CE LYS 50 0 Y D 1 A NZ LYS 60 A NZ LYS 50 0 Y 1 A CE LYS 87 A CE LYS 77 0 Y 1 A NZ LYS 87 A NZ LYS 77 0 Y 1 A CB SER 92 A CB SER 82 0 Y 1 A OG SER 92 A OG SER 82 0 Y 1 A CB ARG 93 A CB ARG 83 0 Y 1 A CG ARG 93 A CG ARG 83 0 Y 1 A CD ARG 93 A CD ARG 83 0 Y 1 A NE ARG 93 A NE ARG 83 0 Y 1 A CZ ARG 93 A CZ ARG 83 0 Y 1 A NH1 ARG 93 A NH1 ARG 83 0 Y 1 A NH2 ARG 93 A NH2 ARG 83 0 Y 1 A CA VAL 94 A CA VAL 84 0 Y 1 A C VAL 94 A C VAL 84 0 Y 1 A O VAL 94 A O VAL 84 0 Y 1 A CB VAL 94 A CB VAL 84 0 Y 1 A CG1 VAL 94 A CG1 VAL 84 0 Y 1 A CG2 VAL 94 A CG2 VAL 84 0 Y 1 A CD LYS 113 A CD LYS 103 0 Y 1 A CE LYS 113 A CE LYS 103 0 Y 1 A NZ LYS 113 A NZ LYS 103 0 Y 1 A CD LYS 119 A CD LYS 109 0 Y 1 A CE LYS 119 A CE LYS 109 0 Y 1 A NZ LYS 119 A NZ LYS 109 0 Y 1 A CD LYS 126 A CD LYS 116 0 Y 1 A CE LYS 126 A CE LYS 116 0 Y 1 A NZ LYS 126 A NZ LYS 116 0 Y 1 A OG SER 129 A OG SER 118 0 Y 1 A CG LYS 135 A CG LYS 124 0 Y 1 A CD LYS 135 A CD LYS 124 0 Y 1 A CE LYS 135 A CE LYS 124 0 Y 1 A NZ LYS 135 A NZ LYS 124 0 Y 1 A CE LYS 137 A CE LYS 126 0 Y 1 A NZ LYS 137 A NZ LYS 126 0 Y 1 A CG ASP 145 A CG ASP 134 0 Y 1 A OD1 ASP 145 A OD1 ASP 134 0 Y 1 A OD2 ASP 145 A OD2 ASP 134 0 Y 1 A CB SER 148 A CB SER 137 0 Y 1 A OG SER 148 A OG SER 137 0 Y 1 A NZ LYS 166 A NZ LYS 155 0 Y 1 A CD LYS 178 A CD LYS 171 0 Y 1 A CE LYS 178 A CE LYS 171 0 Y 1 A NZ LYS 178 A NZ LYS 171 0 Y 1 A CG LYS 187 A CG LYS 180 0 Y 1 A CD LYS 187 A CD LYS 180 0 Y 1 A CE LYS 187 A CE LYS 180 0 Y 1 A NZ LYS 187 A NZ LYS 180 0 Y 1 A CD LYS 224 A CD LYS 215 0 Y 1 A CE LYS 224 A CE LYS 215 0 Y 1 A NZ LYS 224 A NZ LYS 215 0 Y 1 A CD2 LEU 230 A CD2 LEU 221 0 Y 1 A NZ LYS 233 A NZ LYS 225 0 Y 1 A NZ LYS 239 A NZ LYS 231 0 Y 1 A O SER 240 A O SER 232 0 Y 1 A OG SER 240 A OG SER 232 0 Y 1 A MET 14 A MET 1 0 Y 1 A GLU 15 A GLU 2 0 Y 1 A ILE 16 A ILE 3 0 Y 1 A ILE 17 A ILE 4 0 Y 1 A THR 95 A THR 85 0 Y 1 A SER 96 A SER 86 0 Y 1 A ASP 97 A ASP 87 0 Y 1 A PRO 98 A PRO 88 0 Y 1 A GLN 99 A GLN 89 0 Y 1 A LEU 242 A LEU 234 0 Y 1 A VAL 243 A VAL 235 0 Y 1 A PRO 244 A PRO 236 0 Y 1 A PRO 245 A PRO 237 0 Y 1 A HIS 246 A HIS 238 0 Y 1 A THR 247 A THR 239 0 Y 1 A ASN 248 A ASN 240 0 Y 1 9.08 1.50 119.30 128.38 A A A C N CA ARG PRO PRO 27 28 28 Y 1 A A C OXT ASN ASN 248 248 1.235 0.019 1.229 2.464 N 1 A ILE 16 63.01 119.50 1 A ILE 17 174.25 109.87 1 A PRO 28 -48.54 -19.13 1 A GLN 62 73.49 30.29 1 A SER 63 22.94 75.56 1 A HIS 71 -132.47 -49.26 1 A SER 96 -63.06 -112.09 1 A ASP 97 62.31 152.02 1 A GLN 99 64.62 83.10 1 A SER 100 177.41 106.69 1 A LYS 126 -152.15 -7.08 1 A TYR 171 -109.58 -114.00 1 A CYS 191 -110.85 -148.58 1 A PRO 244 -58.14 170.48 1 A HIS 246 -101.76 -124.17 1 A THR 247 -147.46 -74.31 26.8 0.2666 0.2348 0.2845 0.2407 2.23 22 529 9961 529 94 random 1 anisotropic THROUGHOUT 0.0 0.0 FOURIER SYNTHESIS granzyme B Engh & Huber 2.23 22 138 1967 0 0 1829 1.43591 0.007449 2.31 50 1MZA 65669 23808 0.0 0.0 0.125 1 94.0 2.23 2.31 529 94.0 data reduction MOSFLM data reduction CCP4 phasing AMoRE refinement CNS data scaling CCP4 crystal structure of human pro-granzyme K 1 N N 2 N N A ALA 55 A ALA 41 HELX_P A GLN 59 A GLN 45 5 1 5 A SER 164 A SER 153 HELX_P A ASN 169 A ASN 158 1 2 6 A THR 232 A THR 223 HELX_P A LEU 242 A LEU 234 1 3 12 disulf 2.029 A CYS 42 A SG CYS 28 1_555 A CYS 58 A SG CYS 44 1_555 disulf 2.032 A CYS 136 A SG CYS 125 1_555 A CYS 201 A SG CYS 196 1_555 disulf 2.024 A CYS 168 A SG CYS 157 1_555 A CYS 182 A SG CYS 175 1_555 disulf 2.015 A CYS 191 A SG CYS 186 1_555 A CYS 220 A SG CYS 210 1_555 HYDROLASE granzyme, apoptosis, serine protease, S1 family, HYDROLASE A ASP 173 A ASP 166 B 1 A PRO 174 A PRO 167 -0.17 A VAL 243 A VAL 235 1 A PRO 244 A PRO 236 0.04 A PRO 244 A PRO 236 1 A PRO 245 A PRO 237 -0.21 GRAK_HUMAN UNP 1 25 P49863 MEIIGGKEVSPHSRPFMASIQYGGHHVCGGVLIDPQWVLTAAHCQYRFTKGQSPTVVLGAHSLSKNEASKQTLEIKKFIP FSRVTSDPQSNDIMLVKLQTAAKLNKHVKMLHIRSKTSLRSGTKCKVTGWGATDPDSLRPSDTLREVTVTVLSRKLCNSQ SYYNGDPFITKDMVCAGDAKGQKDSCKGDSGGPLICKGVFHAIVSGGHECGVATKPGIYTLLTKKYQTWIKSNLVPPHTN 25 264 1MZA 14 248 P49863 A 1 1 240 1 SER engineered mutation ALA 195 1MZA A P49863 UNP 214 190 8 7 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A LYS 20 A LYS 7 A GLU 21 A GLU 8 A ARG 156 A ARG 145 A VAL 162 A VAL 151 A LYS 135 A LYS 124 A GLY 140 A GLY 129 A PRO 198 A PRO 193 A CYS 201 A CYS 196 A VAL 208 A VAL 199 A VAL 213 A VAL 204 A GLY 226 A GLY 217 A LEU 230 A LEU 221 A MET 180 A MET 173 A GLY 184 A GLY 177 A ARG 156 A ARG 145 A VAL 162 A VAL 151 A MET 30 A MET 17 A TYR 35 A TYR 22 A HIS 39 A HIS 25 A ASP 48 A ASP 34 A TRP 51 A TRP 37 A THR 54 A THR 40 A MET 104 A MET 94 A LEU 108 A LEU 98 A GLN 81 A GLN 71 A PRO 90 A PRO 80 A PRO 64 A PRO 54 A LEU 68 A LEU 58 A MET 30 A MET 17 A TYR 35 A TYR 22 19 P 21 21 21