0.004436 0.002561 0.000000 0.000000 0.005122 0.000000 0.000000 0.000000 0.013177 0.00000 0.00000 0.00000 Andrews, D.M. Chaignot, H. Coomber, B.A. Good, A.C. Hind, S.L. Jones, P.S. Mill, G. Robinson, J.E. Skarzynski, T. Slater, M.J. Somers, D.O.N. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 36 90.00 90.00 120.00 225.450 225.450 75.890 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C19 H35 N3 O6 S 433.563 {1-[2-(1-FORMYL-PROPYL)-3-METHANESULFONYLAMINO-PYRROLIDINE-1-CARBONYL]-2-METHYL-PROPYL}-CARBAMIC ACID TERT-BUTYL ESTER GW472467X non-polymer C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer US Org.Lett. 1523-7060 4 4479 4482 10.1021/ol027014p 12465917 Pyrrolidine-5,5-trans-lactams. 2. The use of X-ray Crystal Structure Data in the Optimisation of P3 and P4 Substituents 2002 10.2210/pdb1n1l/pdb pdb_00001n1l 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 MIRRORS IMAGE PLATE RIGAKU RAXIS IIC YALE MIRRORS + Ni FILTER SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU200 21044.975 HCV NS3 SERINE PROTEASE Protease domain A164T 2 man polymer 2394.039 NS4A COFACTOR Residues 21-39 2 syn polymer 65.409 ZINC ION 2 syn non-polymer 433.563 {1-[2-(1-FORMYL-PROPYL)-3-METHANESULFONYLAMINO-PYRROLIDINE-1-CARBONYL]-2-METHYL-PROPYL}-CARBAMIC ACID TERT-BUTYL ESTER 1 syn non-polymer 18.015 water 107 nat water no no ASMTGGQQMGAPITAYAQQTRGLLGCIITSLTGRDKNQVEGEVQIVSTATQTFLATCINGVCWTVYHGAGTRTIASPKGP VIQMYTNVDQDLVGWPAPQGSRSLTPCTCGSSDLYLVTRHADVIPVRRRGDSRGSLLSPRPISYLKGSSGGPLLCPAGHA VGLFRAAVCTRGVTKAVDFIPVENLETTMRGSHHHHHH ASMTGGQQMGAPITAYAQQTRGLLGCIITSLTGRDKNQVEGEVQIVSTATQTFLATCINGVCWTVYHGAGTRTIASPKGP VIQMYTNVDQDLVGWPAPQGSRSLTPCTCGSSDLYLVTRHADVIPVRRRGDSRGSLLSPRPISYLKGSSGGPLLCPAGHA VGLFRAAVCTRGVTKAVDFIPVENLETTMRGSHHHHHH A,B polypeptide(L) no no KKGSVVIVGRIVLSGKPAIIPKK KKGSVVIVGRIVLSGKPAIIPKK C,D polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Hepacivirus Escherichia sample H STRAIN 11103 Hepatitis C virus 562 Escherichia coli 1 3.96 68.91 VAPOR DIFFUSION, SITTING DROP 6.5 Inhibitor soaked into crystal generated according to Kim et al. (1996) Cell, 87, 343-355, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 277.0K 277.0 diffrn_source database_2 pdbx_struct_conn_angle struct_conn struct_ref_seq_dif struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 2003-10-21 1 1 2008-04-28 1 2 2011-07-13 1 3 2018-04-04 1 4 2021-10-27 _diffrn_source.type _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2002-10-18 REL ZN ZINC ION TRL {1-[2-(1-FORMYL-PROPYL)-3-METHANESULFONYLAMINO-PYRROLIDINE-1-CARBONYL]-2-METHYL-PROPYL}-CARBAMIC ACID TERT-BUTYL ESTER HOH water The peptide was chemically synthesized. The sequence of the protein is naturally found in HEPATITIS C VIRUS type 1B. sample ZN 1 3 ZN ZN 300 A TRL 1 4 TRL TRL 200 A ZN 1 3 ZN ZN 300 B HOH 1 5 HOH HOH 301 A HOH 2 5 HOH HOH 302 A HOH 4 5 HOH HOH 303 A HOH 5 5 HOH HOH 304 A HOH 6 5 HOH HOH 305 A HOH 7 5 HOH HOH 306 A HOH 8 5 HOH HOH 307 A HOH 9 5 HOH HOH 308 A HOH 11 5 HOH HOH 309 A HOH 12 5 HOH HOH 310 A HOH 13 5 HOH HOH 311 A HOH 14 5 HOH HOH 312 A HOH 15 5 HOH HOH 313 A HOH 16 5 HOH HOH 314 A HOH 17 5 HOH HOH 315 A HOH 18 5 HOH HOH 316 A HOH 19 5 HOH HOH 317 A HOH 20 5 HOH HOH 318 A HOH 21 5 HOH HOH 319 A HOH 22 5 HOH HOH 320 A HOH 23 5 HOH HOH 321 A HOH 25 5 HOH HOH 322 A HOH 26 5 HOH HOH 323 A HOH 27 5 HOH HOH 324 A HOH 28 5 HOH HOH 325 A HOH 30 5 HOH HOH 326 A HOH 31 5 HOH HOH 327 A HOH 32 5 HOH HOH 328 A HOH 33 5 HOH HOH 329 A HOH 35 5 HOH HOH 330 A HOH 36 5 HOH HOH 331 A HOH 37 5 HOH HOH 332 A HOH 38 5 HOH HOH 333 A HOH 39 5 HOH HOH 334 A HOH 40 5 HOH HOH 335 A HOH 41 5 HOH HOH 336 A HOH 42 5 HOH HOH 337 A HOH 43 5 HOH HOH 338 A HOH 44 5 HOH HOH 339 A HOH 45 5 HOH HOH 340 A HOH 46 5 HOH HOH 341 A HOH 47 5 HOH HOH 342 A HOH 48 5 HOH HOH 343 A HOH 49 5 HOH HOH 344 A HOH 50 5 HOH HOH 345 A HOH 51 5 HOH HOH 346 A HOH 1 5 HOH HOH 301 B HOH 2 5 HOH HOH 302 B HOH 4 5 HOH HOH 303 B HOH 5 5 HOH HOH 304 B HOH 7 5 HOH HOH 305 B HOH 9 5 HOH HOH 306 B HOH 10 5 HOH HOH 307 B HOH 11 5 HOH HOH 308 B HOH 12 5 HOH HOH 309 B HOH 14 5 HOH HOH 310 B HOH 15 5 HOH HOH 311 B HOH 17 5 HOH HOH 312 B HOH 18 5 HOH HOH 313 B HOH 20 5 HOH HOH 314 B HOH 21 5 HOH HOH 315 B HOH 22 5 HOH HOH 316 B HOH 23 5 HOH HOH 317 B HOH 25 5 HOH HOH 318 B HOH 27 5 HOH HOH 319 B HOH 28 5 HOH HOH 320 B HOH 29 5 HOH HOH 321 B HOH 30 5 HOH HOH 322 B HOH 32 5 HOH HOH 323 B HOH 33 5 HOH HOH 324 B HOH 34 5 HOH HOH 325 B HOH 36 5 HOH HOH 326 B HOH 38 5 HOH HOH 327 B HOH 39 5 HOH HOH 328 B HOH 40 5 HOH HOH 329 B HOH 42 5 HOH HOH 330 B HOH 43 5 HOH HOH 331 B HOH 44 5 HOH HOH 332 B HOH 45 5 HOH HOH 333 B HOH 46 5 HOH HOH 334 B HOH 47 5 HOH HOH 335 B HOH 48 5 HOH HOH 336 B HOH 49 5 HOH HOH 337 B HOH 50 5 HOH HOH 338 B HOH 51 5 HOH HOH 339 B HOH 52 5 HOH HOH 340 B HOH 53 5 HOH HOH 341 B HOH 54 5 HOH HOH 342 B HOH 55 5 HOH HOH 343 B HOH 3 5 HOH HOH 42 C HOH 10 5 HOH HOH 43 C HOH 24 5 HOH HOH 44 C HOH 29 5 HOH HOH 45 C HOH 34 5 HOH HOH 46 C HOH 3 5 HOH HOH 54 D HOH 6 5 HOH HOH 57 D HOH 8 5 HOH HOH 59 D HOH 13 5 HOH HOH 64 D HOH 16 5 HOH HOH 67 D HOH 19 5 HOH HOH 70 D HOH 24 5 HOH HOH 75 D HOH 26 5 HOH HOH 77 D HOH 31 5 HOH HOH 82 D HOH 35 5 HOH HOH 86 D HOH 37 5 HOH HOH 88 D HOH 41 5 HOH HOH 92 D HOH 56 5 HOH HOH 107 D n 1 -9 A n 2 -8 A n 3 -7 A n 4 -6 A n 5 -5 A n 6 -4 A n 7 -3 A n 8 -2 A n 9 -1 A n 10 0 A ALA 1 n 11 ALA 1 A PRO 2 n 12 PRO 2 A ILE 3 n 13 ILE 3 A THR 4 n 14 THR 4 A ALA 5 n 15 ALA 5 A TYR 6 n 16 TYR 6 A ALA 7 n 17 ALA 7 A GLN 8 n 18 GLN 8 A GLN 9 n 19 GLN 9 A THR 10 n 20 THR 10 A ARG 11 n 21 ARG 11 A GLY 12 n 22 GLY 12 A LEU 13 n 23 LEU 13 A LEU 14 n 24 LEU 14 A GLY 15 n 25 GLY 15 A CYS 16 n 26 CYS 16 A ILE 17 n 27 ILE 17 A ILE 18 n 28 ILE 18 A THR 19 n 29 THR 19 A SER 20 n 30 SER 20 A LEU 21 n 31 LEU 21 A THR 22 n 32 THR 22 A GLY 23 n 33 GLY 23 A ARG 24 n 34 ARG 24 A ASP 25 n 35 ASP 25 A LYS 26 n 36 LYS 26 A ASN 27 n 37 ASN 27 A GLN 28 n 38 GLN 28 A VAL 29 n 39 VAL 29 A GLU 30 n 40 GLU 30 A GLY 31 n 41 GLY 31 A GLU 32 n 42 GLU 32 A VAL 33 n 43 VAL 33 A GLN 34 n 44 GLN 34 A ILE 35 n 45 ILE 35 A VAL 36 n 46 VAL 36 A SER 37 n 47 SER 37 A THR 38 n 48 THR 38 A ALA 39 n 49 ALA 39 A THR 40 n 50 THR 40 A GLN 41 n 51 GLN 41 A THR 42 n 52 THR 42 A PHE 43 n 53 PHE 43 A LEU 44 n 54 LEU 44 A ALA 45 n 55 ALA 45 A THR 46 n 56 THR 46 A CYS 47 n 57 CYS 47 A ILE 48 n 58 ILE 48 A ASN 49 n 59 ASN 49 A GLY 50 n 60 GLY 50 A VAL 51 n 61 VAL 51 A CYS 52 n 62 CYS 52 A TRP 53 n 63 TRP 53 A THR 54 n 64 THR 54 A VAL 55 n 65 VAL 55 A TYR 56 n 66 TYR 56 A HIS 57 n 67 HIS 57 A GLY 58 n 68 GLY 58 A ALA 59 n 69 ALA 59 A GLY 60 n 70 GLY 60 A THR 61 n 71 THR 61 A ARG 62 n 72 ARG 62 A THR 63 n 73 THR 63 A ILE 64 n 74 ILE 64 A ALA 65 n 75 ALA 65 A SER 66 n 76 SER 66 A PRO 67 n 77 PRO 67 A LYS 68 n 78 LYS 68 A GLY 69 n 79 GLY 69 A PRO 70 n 80 PRO 70 A VAL 71 n 81 VAL 71 A ILE 72 n 82 ILE 72 A GLN 73 n 83 GLN 73 A MET 74 n 84 MET 74 A TYR 75 n 85 TYR 75 A THR 76 n 86 THR 76 A ASN 77 n 87 ASN 77 A VAL 78 n 88 VAL 78 A ASP 79 n 89 ASP 79 A GLN 80 n 90 GLN 80 A ASP 81 n 91 ASP 81 A LEU 82 n 92 LEU 82 A VAL 83 n 93 VAL 83 A GLY 84 n 94 GLY 84 A TRP 85 n 95 TRP 85 A PRO 86 n 96 PRO 86 A ALA 87 n 97 ALA 87 A PRO 88 n 98 PRO 88 A GLN 89 n 99 GLN 89 A GLY 90 n 100 GLY 90 A SER 91 n 101 SER 91 A ARG 92 n 102 ARG 92 A SER 93 n 103 SER 93 A LEU 94 n 104 LEU 94 A THR 95 n 105 THR 95 A PRO 96 n 106 PRO 96 A CYS 97 n 107 CYS 97 A THR 98 n 108 THR 98 A CYS 99 n 109 CYS 99 A GLY 100 n 110 GLY 100 A SER 101 n 111 SER 101 A SER 102 n 112 SER 102 A ASP 103 n 113 ASP 103 A LEU 104 n 114 LEU 104 A TYR 105 n 115 TYR 105 A LEU 106 n 116 LEU 106 A VAL 107 n 117 VAL 107 A THR 108 n 118 THR 108 A ARG 109 n 119 ARG 109 A HIS 110 n 120 HIS 110 A ALA 111 n 121 ALA 111 A ASP 112 n 122 ASP 112 A VAL 113 n 123 VAL 113 A ILE 114 n 124 ILE 114 A PRO 115 n 125 PRO 115 A VAL 116 n 126 VAL 116 A ARG 117 n 127 ARG 117 A ARG 118 n 128 ARG 118 A ARG 119 n 129 ARG 119 A GLY 120 n 130 GLY 120 A ASP 121 n 131 ASP 121 A SER 122 n 132 SER 122 A ARG 123 n 133 ARG 123 A GLY 124 n 134 GLY 124 A SER 125 n 135 SER 125 A LEU 126 n 136 LEU 126 A LEU 127 n 137 LEU 127 A SER 128 n 138 SER 128 A PRO 129 n 139 PRO 129 A ARG 130 n 140 ARG 130 A PRO 131 n 141 PRO 131 A ILE 132 n 142 ILE 132 A SER 133 n 143 SER 133 A TYR 134 n 144 TYR 134 A LEU 135 n 145 LEU 135 A LYS 136 n 146 LYS 136 A GLY 137 n 147 GLY 137 A SER 138 n 148 SER 138 A SER 139 n 149 SER 139 A GLY 140 n 150 GLY 140 A GLY 141 n 151 GLY 141 A PRO 142 n 152 PRO 142 A LEU 143 n 153 LEU 143 A LEU 144 n 154 LEU 144 A CYS 145 n 155 CYS 145 A PRO 146 n 156 PRO 146 A ALA 147 n 157 ALA 147 A GLY 148 n 158 GLY 148 A HIS 149 n 159 HIS 149 A ALA 150 n 160 ALA 150 A VAL 151 n 161 VAL 151 A GLY 152 n 162 GLY 152 A LEU 153 n 163 LEU 153 A PHE 154 n 164 PHE 154 A ARG 155 n 165 ARG 155 A ALA 156 n 166 ALA 156 A ALA 157 n 167 ALA 157 A VAL 158 n 168 VAL 158 A CYS 159 n 169 CYS 159 A THR 160 n 170 THR 160 A ARG 161 n 171 ARG 161 A GLY 162 n 172 GLY 162 A VAL 163 n 173 VAL 163 A THR 164 n 174 THR 164 A LYS 165 n 175 LYS 165 A ALA 166 n 176 ALA 166 A VAL 167 n 177 VAL 167 A ASP 168 n 178 ASP 168 A PHE 169 n 179 PHE 169 A ILE 170 n 180 ILE 170 A PRO 171 n 181 PRO 171 A VAL 172 n 182 VAL 172 A GLU 173 n 183 GLU 173 A ASN 174 n 184 ASN 174 A LEU 175 n 185 LEU 175 A GLU 176 n 186 GLU 176 A THR 177 n 187 THR 177 A THR 178 n 188 THR 178 A MET 179 n 189 MET 179 A ARG 180 n 190 ARG 180 A n 191 181 A n 192 182 A n 193 183 A n 194 184 A n 195 185 A n 196 186 A n 197 187 A n 198 188 A n 1 -9 B n 2 -8 B n 3 -7 B n 4 -6 B n 5 -5 B n 6 -4 B n 7 -3 B n 8 -2 B n 9 -1 B n 10 0 B n 11 1 B n 12 2 B n 13 3 B n 14 4 B n 15 5 B n 16 6 B n 17 7 B n 18 8 B n 19 9 B n 20 10 B n 21 11 B n 22 12 B n 23 13 B n 24 14 B n 25 15 B n 26 16 B n 27 17 B n 28 18 B n 29 19 B n 30 20 B n 31 21 B n 32 22 B n 33 23 B n 34 24 B n 35 25 B n 36 26 B n 37 27 B GLN 28 n 38 GLN 28 B VAL 29 n 39 VAL 29 B GLU 30 n 40 GLU 30 B GLY 31 n 41 GLY 31 B GLU 32 n 42 GLU 32 B VAL 33 n 43 VAL 33 B GLN 34 n 44 GLN 34 B ILE 35 n 45 ILE 35 B VAL 36 n 46 VAL 36 B SER 37 n 47 SER 37 B THR 38 n 48 THR 38 B ALA 39 n 49 ALA 39 B THR 40 n 50 THR 40 B GLN 41 n 51 GLN 41 B THR 42 n 52 THR 42 B PHE 43 n 53 PHE 43 B LEU 44 n 54 LEU 44 B ALA 45 n 55 ALA 45 B THR 46 n 56 THR 46 B CYS 47 n 57 CYS 47 B ILE 48 n 58 ILE 48 B ASN 49 n 59 ASN 49 B GLY 50 n 60 GLY 50 B VAL 51 n 61 VAL 51 B CYS 52 n 62 CYS 52 B TRP 53 n 63 TRP 53 B THR 54 n 64 THR 54 B VAL 55 n 65 VAL 55 B TYR 56 n 66 TYR 56 B HIS 57 n 67 HIS 57 B GLY 58 n 68 GLY 58 B ALA 59 n 69 ALA 59 B GLY 60 n 70 GLY 60 B THR 61 n 71 THR 61 B ARG 62 n 72 ARG 62 B THR 63 n 73 THR 63 B ILE 64 n 74 ILE 64 B ALA 65 n 75 ALA 65 B SER 66 n 76 SER 66 B PRO 67 n 77 PRO 67 B LYS 68 n 78 LYS 68 B GLY 69 n 79 GLY 69 B PRO 70 n 80 PRO 70 B VAL 71 n 81 VAL 71 B ILE 72 n 82 ILE 72 B GLN 73 n 83 GLN 73 B MET 74 n 84 MET 74 B TYR 75 n 85 TYR 75 B THR 76 n 86 THR 76 B ASN 77 n 87 ASN 77 B VAL 78 n 88 VAL 78 B ASP 79 n 89 ASP 79 B GLN 80 n 90 GLN 80 B ASP 81 n 91 ASP 81 B LEU 82 n 92 LEU 82 B VAL 83 n 93 VAL 83 B GLY 84 n 94 GLY 84 B TRP 85 n 95 TRP 85 B PRO 86 n 96 PRO 86 B ALA 87 n 97 ALA 87 B PRO 88 n 98 PRO 88 B GLN 89 n 99 GLN 89 B GLY 90 n 100 GLY 90 B SER 91 n 101 SER 91 B ARG 92 n 102 ARG 92 B SER 93 n 103 SER 93 B LEU 94 n 104 LEU 94 B THR 95 n 105 THR 95 B PRO 96 n 106 PRO 96 B CYS 97 n 107 CYS 97 B THR 98 n 108 THR 98 B CYS 99 n 109 CYS 99 B GLY 100 n 110 GLY 100 B SER 101 n 111 SER 101 B SER 102 n 112 SER 102 B ASP 103 n 113 ASP 103 B LEU 104 n 114 LEU 104 B TYR 105 n 115 TYR 105 B LEU 106 n 116 LEU 106 B VAL 107 n 117 VAL 107 B THR 108 n 118 THR 108 B ARG 109 n 119 ARG 109 B HIS 110 n 120 HIS 110 B ALA 111 n 121 ALA 111 B ASP 112 n 122 ASP 112 B VAL 113 n 123 VAL 113 B ILE 114 n 124 ILE 114 B PRO 115 n 125 PRO 115 B VAL 116 n 126 VAL 116 B ARG 117 n 127 ARG 117 B ARG 118 n 128 ARG 118 B ARG 119 n 129 ARG 119 B GLY 120 n 130 GLY 120 B ASP 121 n 131 ASP 121 B SER 122 n 132 SER 122 B ARG 123 n 133 ARG 123 B GLY 124 n 134 GLY 124 B SER 125 n 135 SER 125 B LEU 126 n 136 LEU 126 B LEU 127 n 137 LEU 127 B SER 128 n 138 SER 128 B PRO 129 n 139 PRO 129 B ARG 130 n 140 ARG 130 B PRO 131 n 141 PRO 131 B ILE 132 n 142 ILE 132 B SER 133 n 143 SER 133 B TYR 134 n 144 TYR 134 B LEU 135 n 145 LEU 135 B LYS 136 n 146 LYS 136 B GLY 137 n 147 GLY 137 B SER 138 n 148 SER 138 B SER 139 n 149 SER 139 B GLY 140 n 150 GLY 140 B GLY 141 n 151 GLY 141 B PRO 142 n 152 PRO 142 B LEU 143 n 153 LEU 143 B LEU 144 n 154 LEU 144 B CYS 145 n 155 CYS 145 B PRO 146 n 156 PRO 146 B ALA 147 n 157 ALA 147 B GLY 148 n 158 GLY 148 B HIS 149 n 159 HIS 149 B ALA 150 n 160 ALA 150 B VAL 151 n 161 VAL 151 B GLY 152 n 162 GLY 152 B LEU 153 n 163 LEU 153 B PHE 154 n 164 PHE 154 B ARG 155 n 165 ARG 155 B ALA 156 n 166 ALA 156 B ALA 157 n 167 ALA 157 B VAL 158 n 168 VAL 158 B CYS 159 n 169 CYS 159 B THR 160 n 170 THR 160 B ARG 161 n 171 ARG 161 B GLY 162 n 172 GLY 162 B VAL 163 n 173 VAL 163 B THR 164 n 174 THR 164 B LYS 165 n 175 LYS 165 B ALA 166 n 176 ALA 166 B VAL 167 n 177 VAL 167 B ASP 168 n 178 ASP 168 B PHE 169 n 179 PHE 169 B ILE 170 n 180 ILE 170 B PRO 171 n 181 PRO 171 B VAL 172 n 182 VAL 172 B GLU 173 n 183 GLU 173 B ASN 174 n 184 ASN 174 B LEU 175 n 185 LEU 175 B GLU 176 n 186 GLU 176 B THR 177 n 187 THR 177 B THR 178 n 188 THR 178 B MET 179 n 189 MET 179 B ARG 180 n 190 ARG 180 B n 191 181 B n 192 182 B n 193 183 B n 194 184 B n 195 185 B n 196 186 B n 197 187 B n 198 188 B n 1 19 C LYS 20 n 2 LYS 20 C GLY 21 n 3 GLY 21 C SER 22 n 4 SER 22 C VAL 23 n 5 VAL 23 C VAL 24 n 6 VAL 24 C ILE 25 n 7 ILE 25 C VAL 26 n 8 VAL 26 C GLY 27 n 9 GLY 27 C ARG 28 n 10 ARG 28 C ILE 29 n 11 ILE 29 C VAL 30 n 12 VAL 30 C LEU 31 n 13 LEU 31 C SER 32 n 14 SER 32 C GLY 33 n 15 GLY 33 C LYS 34 n 16 LYS 34 C PRO 35 n 17 PRO 35 C ALA 36 n 18 ALA 36 C ILE 37 n 19 ILE 37 C ILE 38 n 20 ILE 38 C PRO 39 n 21 PRO 39 C LYS 40 n 22 LYS 40 C n 23 41 C n 1 19 D n 2 20 D GLY 21 n 3 GLY 21 D SER 22 n 4 SER 22 D VAL 23 n 5 VAL 23 D VAL 24 n 6 VAL 24 D ILE 25 n 7 ILE 25 D VAL 26 n 8 VAL 26 D GLY 27 n 9 GLY 27 D ARG 28 n 10 ARG 28 D ILE 29 n 11 ILE 29 D VAL 30 n 12 VAL 30 D LEU 31 n 13 LEU 31 D SER 32 n 14 SER 32 D GLY 33 n 15 GLY 33 D LYS 34 n 16 LYS 34 D PRO 35 n 17 PRO 35 D ALA 36 n 18 ALA 36 D n 19 37 D n 20 38 D n 21 39 D n 22 40 D n 23 41 D author_and_software_defined_assembly PISA 2 dimeric author_and_software_defined_assembly PISA 2 dimeric software_defined_assembly PISA 4 tetrameric 3240 -48 10140 1710 -47 8450 7190 -117 16360 A CYS 97 A SG CYS 107 1_555 A ZN 300 E ZN ZN 1_555 A CYS 99 A SG CYS 109 1_555 97.2 A CYS 97 A SG CYS 107 1_555 A ZN 300 E ZN ZN 1_555 A CYS 145 A SG CYS 155 1_555 105.4 A CYS 99 A SG CYS 109 1_555 A ZN 300 E ZN ZN 1_555 A CYS 145 A SG CYS 155 1_555 104.8 A CYS 97 A SG CYS 107 1_555 A ZN 300 E ZN ZN 1_555 A HOH 307 H O HOH 1_555 119.5 A CYS 99 A SG CYS 109 1_555 A ZN 300 E ZN ZN 1_555 A HOH 307 H O HOH 1_555 116.6 A CYS 145 A SG CYS 155 1_555 A ZN 300 E ZN ZN 1_555 A HOH 307 H O HOH 1_555 111.6 B CYS 97 B SG CYS 107 1_555 B ZN 300 G ZN ZN 1_555 B CYS 99 B SG CYS 109 1_555 96.4 B CYS 97 B SG CYS 107 1_555 B ZN 300 G ZN ZN 1_555 B CYS 145 B SG CYS 155 1_555 105.9 B CYS 99 B SG CYS 109 1_555 B ZN 300 G ZN ZN 1_555 B CYS 145 B SG CYS 155 1_555 114.8 B CYS 97 B SG CYS 107 1_555 B ZN 300 G ZN ZN 1_555 B HOH 304 I O HOH 1_555 114.0 B CYS 99 B SG CYS 109 1_555 B ZN 300 G ZN ZN 1_555 B HOH 304 I O HOH 1_555 108.3 B CYS 145 B SG CYS 155 1_555 B ZN 300 G ZN ZN 1_555 B HOH 304 I O HOH 1_555 115.8 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N TYR 6 A N TYR 16 C O VAL 30 C O VAL 12 C O VAL 26 C O VAL 8 A N ILE 35 A N ILE 45 A N VAL 36 A N VAL 46 A O PHE 43 A O PHE 53 A N THR 46 A N THR 56 A O TRP 53 A O TRP 63 A N CYS 52 A N CYS 62 A O TRP 85 A O TRP 95 A O LEU 82 A O LEU 92 A N ASN 77 A N ASN 87 A N LEU 104 A N LEU 114 A O VAL 116 A O VAL 126 A N ARG 117 A N ARG 127 A O SER 125 A O SER 135 A N ARG 130 A N ARG 140 A O THR 164 A O THR 174 A O ASP 168 A O ASP 178 A N ALA 156 A N ALA 166 A O VAL 151 A O VAL 161 A N LEU 143 A N LEU 153 A O LEU 144 A O LEU 154 A N TYR 105 A N TYR 115 B N ASN 77 B N ASN 87 B O LEU 82 B O LEU 92 B O TRP 85 B O TRP 95 B N CYS 52 B N CYS 62 B O TRP 53 B O TRP 63 B N THR 46 B N THR 56 B O ALA 45 B O ALA 55 B N GLN 34 B N GLN 44 B N ILE 35 B N ILE 45 D O VAL 26 D O VAL 8 D O VAL 30 D O VAL 12 C N ALA 36 C N ALA 18 B N LEU 104 B N LEU 114 B O VAL 116 B O VAL 126 B N ARG 117 B N ARG 127 B O SER 125 B O SER 135 B N ARG 130 B N ARG 140 B O THR 164 B O THR 174 B O ASP 168 B O ASP 178 B N ALA 156 B N ALA 166 B O VAL 151 B O VAL 161 B N LEU 143 B N LEU 153 B O LEU 144 B O LEU 154 B N TYR 105 B N TYR 115 1 A ALA -9 A ALA 1 1 Y 1 A SER -8 A SER 2 1 Y 1 A MET -7 A MET 3 1 Y 1 A THR -6 A THR 4 1 Y 1 A GLY -5 A GLY 5 1 Y 1 A GLY -4 A GLY 6 1 Y 1 A GLN -3 A GLN 7 1 Y 1 A GLN -2 A GLN 8 1 Y 1 A MET -1 A MET 9 1 Y 1 A GLY 0 A GLY 10 1 Y 1 A GLY 181 A GLY 191 1 Y 1 A SER 182 A SER 192 1 Y 1 A HIS 183 A HIS 193 1 Y 1 A HIS 184 A HIS 194 1 Y 1 A HIS 185 A HIS 195 1 Y 1 A HIS 186 A HIS 196 1 Y 1 A HIS 187 A HIS 197 1 Y 1 A HIS 188 A HIS 198 1 Y 1 B ALA -9 B ALA 1 1 Y 1 B SER -8 B SER 2 1 Y 1 B MET -7 B MET 3 1 Y 1 B THR -6 B THR 4 1 Y 1 B GLY -5 B GLY 5 1 Y 1 B GLY -4 B GLY 6 1 Y 1 B GLN -3 B GLN 7 1 Y 1 B GLN -2 B GLN 8 1 Y 1 B MET -1 B MET 9 1 Y 1 B GLY 0 B GLY 10 1 Y 1 B ALA 1 B ALA 11 1 Y 1 B PRO 2 B PRO 12 1 Y 1 B ILE 3 B ILE 13 1 Y 1 B THR 4 B THR 14 1 Y 1 B ALA 5 B ALA 15 1 Y 1 B TYR 6 B TYR 16 1 Y 1 B ALA 7 B ALA 17 1 Y 1 B GLN 8 B GLN 18 1 Y 1 B GLN 9 B GLN 19 1 Y 1 B THR 10 B THR 20 1 Y 1 B ARG 11 B ARG 21 1 Y 1 B GLY 12 B GLY 22 1 Y 1 B LEU 13 B LEU 23 1 Y 1 B LEU 14 B LEU 24 1 Y 1 B GLY 15 B GLY 25 1 Y 1 B CYS 16 B CYS 26 1 Y 1 B ILE 17 B ILE 27 1 Y 1 B ILE 18 B ILE 28 1 Y 1 B THR 19 B THR 29 1 Y 1 B SER 20 B SER 30 1 Y 1 B LEU 21 B LEU 31 1 Y 1 B THR 22 B THR 32 1 Y 1 B GLY 23 B GLY 33 1 Y 1 B ARG 24 B ARG 34 1 Y 1 B ASP 25 B ASP 35 1 Y 1 B LYS 26 B LYS 36 1 Y 1 B ASN 27 B ASN 37 1 Y 1 B GLY 181 B GLY 191 1 Y 1 B SER 182 B SER 192 1 Y 1 B HIS 183 B HIS 193 1 Y 1 B HIS 184 B HIS 194 1 Y 1 B HIS 185 B HIS 195 1 Y 1 B HIS 186 B HIS 196 1 Y 1 B HIS 187 B HIS 197 1 Y 1 B HIS 188 B HIS 198 1 Y 1 C LYS 19 C LYS 1 1 Y 1 C LYS 41 C LYS 23 1 Y 1 D LYS 19 D LYS 1 1 Y 1 D LYS 20 D LYS 2 1 Y 1 D ILE 37 D ILE 19 1 Y 1 D ILE 38 D ILE 20 1 Y 1 D PRO 39 D PRO 21 1 Y 1 D LYS 40 D LYS 22 1 Y 1 D LYS 41 D LYS 23 1 Y 1 A PHE 43 -160.17 -160.79 1 A PRO 129 -47.24 150.42 1 B PHE 43 -161.35 -155.21 1 B SER 128 -163.08 95.67 45.569 -1.00 -0.50 0.00 -1.00 0.00 1.51 0.948 0.931 0.2195 0.18318 0.18508 0.18508 2.60 20.00 1115 20724 20724 5.1 100.00 RANDOM 1 THROUGHOUT 1.0 MOLECULAR REPLACEMENT 0.80 MAXIMUM LIKELIHOOD BABINET MODEL WITH MASK 2.60 20.00 107 2870 31 0 2732 0.016 0.021 2818 1.741 1.977 3840 6.551 5.000 366 0.110 0.200 462 0.006 0.020 2071 0.237 0.200 1165 0.173 0.200 145 0.256 0.200 37 0.232 0.200 4 1.632 2.000 1831 3.305 4.000 2973 5.492 6.000 987 8.583 9.000 867 0.36 0.266 2.667 72 1441 20 2.6 40.0 1N1L 22723 21878 1.0 0.052 1 16.6 96.3 0.238 2.60 2.69 4.5 2074 92.0 data reduction DENZO data reduction TRUNCATE refinement REFMAC data scaling CCP4 (TRUNCATE) CRYSTAL STRUCTURE OF HCV NS3 PROTEASE DOMAIN:NS4A PEPTIDE COMPLEX WITH COVALENTLY BOUND INHIBITOR (GW472467X) 1 N N 1 N N 2 N N 2 N N 3 N N 4 N N 3 N N 5 N N 5 N N 5 N N 5 N N A GLY 12 A GLY 22 HELX_P A GLY 23 A GLY 33 1 1 12 A TYR 56 A TYR 66 HELX_P A GLY 60 A GLY 70 1 2 5 A ILE 132 A ILE 142 HELX_P A LYS 136 A LYS 146 1 3 5 A VAL 172 A VAL 182 HELX_P A ARG 180 A ARG 190 1 4 9 B TYR 56 B TYR 66 HELX_P B GLY 60 B GLY 70 1 5 5 B SER 133 B SER 143 HELX_P B LYS 136 B LYS 146 5 6 4 B VAL 172 B VAL 182 HELX_P B MET 179 B MET 189 1 7 8 covale 1.577 none A SER 139 A OG SER 149 1_555 A TRL 200 F C28 TRL 1_555 metalc 2.323 A CYS 97 A SG CYS 107 1_555 A ZN 300 E ZN ZN 1_555 metalc 2.357 A CYS 99 A SG CYS 109 1_555 A ZN 300 E ZN ZN 1_555 metalc 2.368 A CYS 145 A SG CYS 155 1_555 A ZN 300 E ZN ZN 1_555 metalc 2.215 A ZN 300 E ZN ZN 1_555 A HOH 307 H O HOH 1_555 metalc 2.361 B CYS 97 B SG CYS 107 1_555 B ZN 300 G ZN ZN 1_555 metalc 2.373 B CYS 99 B SG CYS 109 1_555 B ZN 300 G ZN ZN 1_555 metalc 2.261 B CYS 145 B SG CYS 155 1_555 B ZN 300 G ZN ZN 1_555 metalc 2.323 B ZN 300 G ZN ZN 1_555 B HOH 304 I O HOH 1_555 VIRAL PROTEIN VIRAL PROTEIN, SERINE PROTEASE, NONSTRUCTURAL PROTEINS, COFACTOR PEPTIDE, HELICASE, INHIBITOR POLG_HCVH UNP 1 1026 P27958 CAB53095 GB 2 1678 5748511 1026 1205 1N1L 1 180 P27958 A 1 11 190 1026 1205 1N1L 1 180 P27958 B 1 11 190 1678 1696 1N1L 21 39 5748511 C 2 3 21 1678 1696 1N1L 21 39 5748511 D 2 3 21 1 cloning artifact ALA -9 1N1L A P27958 UNP 1 1 cloning artifact SER -8 1N1L A P27958 UNP 2 1 cloning artifact MET -7 1N1L A P27958 UNP 3 1 cloning artifact THR -6 1N1L A P27958 UNP 4 1 cloning artifact GLY -5 1N1L A P27958 UNP 5 1 cloning artifact GLY -4 1N1L A P27958 UNP 6 1 cloning artifact GLN -3 1N1L A P27958 UNP 7 1 cloning artifact GLN -2 1N1L A P27958 UNP 8 1 cloning artifact MET -1 1N1L A P27958 UNP 9 1 cloning artifact GLY 0 1N1L A P27958 UNP 10 1 ALA engineered mutation THR 164 1N1L A P27958 UNP 1190 174 1 expression tag GLY 181 1N1L A P27958 UNP 191 1 expression tag SER 182 1N1L A P27958 UNP 192 1 expression tag HIS 183 1N1L A P27958 UNP 193 1 expression tag HIS 184 1N1L A P27958 UNP 194 1 expression tag HIS 185 1N1L A P27958 UNP 195 1 expression tag HIS 186 1N1L A P27958 UNP 196 1 expression tag HIS 187 1N1L A P27958 UNP 197 1 expression tag HIS 188 1N1L A P27958 UNP 198 2 cloning artifact ALA -9 1N1L B P27958 UNP 1 2 cloning artifact SER -8 1N1L B P27958 UNP 2 2 cloning artifact MET -7 1N1L B P27958 UNP 3 2 cloning artifact THR -6 1N1L B P27958 UNP 4 2 cloning artifact GLY -5 1N1L B P27958 UNP 5 2 cloning artifact GLY -4 1N1L B P27958 UNP 6 2 cloning artifact GLN -3 1N1L B P27958 UNP 7 2 cloning artifact GLN -2 1N1L B P27958 UNP 8 2 cloning artifact MET -1 1N1L B P27958 UNP 9 2 cloning artifact GLY 0 1N1L B P27958 UNP 10 2 ALA engineered mutation THR 164 1N1L B P27958 UNP 1190 174 2 expression tag GLY 181 1N1L B P27958 UNP 191 2 expression tag SER 182 1N1L B P27958 UNP 192 2 expression tag HIS 183 1N1L B P27958 UNP 193 2 expression tag HIS 184 1N1L B P27958 UNP 194 2 expression tag HIS 185 1N1L B P27958 UNP 195 2 expression tag HIS 186 1N1L B P27958 UNP 196 2 expression tag HIS 187 1N1L B P27958 UNP 197 2 expression tag HIS 188 1N1L B P27958 UNP 198 3 cloning artifact LYS 19 1N1L C 5748511 GB 1 3 cloning artifact LYS 20 1N1L C 5748511 GB 2 3 cloning artifact LYS 40 1N1L C 5748511 GB 22 3 cloning artifact LYS 41 1N1L C 5748511 GB 23 4 cloning artifact LYS 19 1N1L D 5748511 GB 1 4 cloning artifact LYS 20 1N1L D 5748511 GB 2 4 cloning artifact LYS 40 1N1L D 5748511 GB 22 4 cloning artifact LYS 41 1N1L D 5748511 GB 23 7 7 7 7 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A TYR 6 A TYR 16 A GLN 9 A GLN 19 C VAL 24 C VAL 6 C VAL 30 C VAL 12 A VAL 33 A VAL 43 A SER 37 A SER 47 A THR 42 A THR 52 A ILE 48 A ILE 58 A VAL 51 A VAL 61 A VAL 55 A VAL 65 A LEU 82 A LEU 92 A PRO 86 A PRO 96 A TYR 75 A TYR 85 A ASN 77 A ASN 87 A ASP 103 A ASP 113 A VAL 107 A VAL 117 A VAL 113 A VAL 123 A ARG 118 A ARG 128 A ARG 123 A ARG 133 A PRO 131 A PRO 141 A VAL 163 A VAL 173 A PRO 171 A PRO 181 A ALA 150 A ALA 160 A THR 160 A THR 170 A PRO 142 A PRO 152 A LEU 144 A LEU 154 A ASP 103 A ASP 113 A VAL 107 A VAL 117 B TYR 75 B TYR 85 B ASN 77 B ASN 87 B LEU 82 B LEU 92 B PRO 86 B PRO 96 B VAL 51 B VAL 61 B VAL 55 B VAL 65 B THR 42 B THR 52 B ILE 48 B ILE 58 B VAL 33 B VAL 43 B SER 37 B SER 47 D VAL 24 D VAL 6 D VAL 30 D VAL 12 C ALA 36 C ALA 18 C ILE 37 C ILE 19 B ASP 103 B ASP 113 B VAL 107 B VAL 117 B VAL 113 B VAL 123 B GLY 120 B GLY 130 B ARG 123 B ARG 133 B PRO 131 B PRO 141 B VAL 163 B VAL 173 B PRO 171 B PRO 181 B ALA 150 B ALA 160 B THR 160 B THR 170 B PRO 142 B PRO 152 B LEU 144 B LEU 154 B ASP 103 B ASP 113 B VAL 107 B VAL 117 BINDING SITE FOR RESIDUE ZN A 300 A ZN 300 Software 4 BINDING SITE FOR RESIDUE ZN B 300 B ZN 300 Software 4 BINDING SITE FOR RESIDUE TRL A 200 A TRL 200 Software 12 A CYS 97 A CYS 107 4 1_555 A CYS 99 A CYS 109 4 1_555 A CYS 145 A CYS 155 4 1_555 A HOH 307 H HOH 4 1_555 B CYS 97 B CYS 107 4 1_555 B CYS 99 B CYS 109 4 1_555 B CYS 145 B CYS 155 4 1_555 B HOH 304 I HOH 4 1_555 A GLN 41 A GLN 51 12 1_555 A PHE 43 A PHE 53 12 1_555 A HIS 57 A HIS 67 12 1_555 A ILE 132 A ILE 142 12 1_555 A LEU 135 A LEU 145 12 1_555 A GLY 137 A GLY 147 12 1_555 A SER 138 A SER 148 12 1_555 A SER 139 A SER 149 12 1_555 A ALA 156 A ALA 166 12 1_555 A ALA 157 A ALA 167 12 1_555 A ASP 168 A ASP 178 12 1_555 A HOH 335 H HOH 12 1_555 155 H 3 2