1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Farooq, A.
Zeng, L.
Yan, K.S.
Ravichandran, K.S.
Zhou, M.-M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
Structure
STRUE6
2005
0969-2126
11
905
913
10.1016/S0969-2126(03)00134-5
12906822
Coupling of Folding and Binding in the PTB Domain of the Signaling Protein Shc
2003
10.2210/pdb1n3h/pdb
pdb_00001n3h
1
SINGLE WAVELENGTH
M
1
1.0
22657.021
SHC Transforming protein
PTB domain
1
man
polymer
no
no
MNKLSGGGGRRTRVEGGQLGGEEWTRHGSFVNKPTRGWLHPNDKVMGPGVSYLVRYMGCVEVLQSMRALDFNTRTQVTRE
AISLVCEAVPGAKGATRRRKPCSRPLSSILGRSNLKFAGMPITLTVSTSSLNLMAADCKQIIANHHMQSISFASGGDPDT
AEYVAYVAKDPVNQRACHILECPEGLAQDVISTIGQAFELRFKQYLR
MNKLSGGGGRRTRVEGGQLGGEEWTRHGSFVNKPTRGWLHPNDKVMGPGVSYLVRYMGCVEVLQSMRALDFNTRTQVTRE
AISLVCEAVPGAKGATRRRKPCSRPLSSILGRSNLKFAGMPITLTVSTSSLNLMAADCKQIIANHHMQSISFASGGDPDT
AEYVAYVAKDPVNQRACHILECPEGLAQDVISTIGQAFELRFKQYLR
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
Escherichia coli
sample
Shc
9606
Homo sapiens
469008
Escherichia coli BL21(DE3)
BL21(DE3)
Plasmid
pET15b
database_2
pdbx_nmr_software
pdbx_struct_assembly
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2003-10-28
1
1
2008-04-28
1
2
2011-07-13
1
3
2022-02-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
The same protein complexed with TrkA phosphopeptide
RCSB
Y
RCSB
2002-10-28
REL
200
1
3D_13C-separated_NOESY
3D_15N-separated_NOESY
HNHA
200mM
6.5
1
atm
308
K
Distance Geometry, Simulated Annealing, Molecular Dynamics, ARIA
0.5mM Shc PTB Domain, 50mM Sodium phosphate, 20mM DTT-d10, pH 6.5
90% H2O/10% D2O
Delaglio
processing
NMRPipe
3.1
Brunger
structure solution
X-PLOR
3.1
collection
XwinNMR
3.1
Niiges, M.
structure solution
ARIA
1.1
Brunger
refinement
X-PLOR
3.1
600
Bruker
DRX
MET
1
n
1
MET
1
A
ASN
2
n
2
ASN
2
A
LYS
3
n
3
LYS
3
A
LEU
4
n
4
LEU
4
A
SER
5
n
5
SER
5
A
GLY
6
n
6
GLY
6
A
GLY
7
n
7
GLY
7
A
GLY
8
n
8
GLY
8
A
GLY
9
n
9
GLY
9
A
ARG
10
n
10
ARG
10
A
ARG
11
n
11
ARG
11
A
THR
12
n
12
THR
12
A
ARG
13
n
13
ARG
13
A
VAL
14
n
14
VAL
14
A
GLU
15
n
15
GLU
15
A
GLY
16
n
16
GLY
16
A
GLY
17
n
17
GLY
17
A
GLN
18
n
18
GLN
18
A
LEU
19
n
19
LEU
19
A
GLY
20
n
20
GLY
20
A
GLY
21
n
21
GLY
21
A
GLU
22
n
22
GLU
22
A
GLU
23
n
23
GLU
23
A
TRP
24
n
24
TRP
24
A
THR
25
n
25
THR
25
A
ARG
26
n
26
ARG
26
A
HIS
27
n
27
HIS
27
A
GLY
28
n
28
GLY
28
A
SER
29
n
29
SER
29
A
PHE
30
n
30
PHE
30
A
VAL
31
n
31
VAL
31
A
ASN
32
n
32
ASN
32
A
LYS
33
n
33
LYS
33
A
PRO
34
n
34
PRO
34
A
THR
35
n
35
THR
35
A
ARG
36
n
36
ARG
36
A
GLY
37
n
37
GLY
37
A
TRP
38
n
38
TRP
38
A
LEU
39
n
39
LEU
39
A
HIS
40
n
40
HIS
40
A
PRO
41
n
41
PRO
41
A
ASN
42
n
42
ASN
42
A
ASP
43
n
43
ASP
43
A
LYS
44
n
44
LYS
44
A
VAL
45
n
45
VAL
45
A
MET
46
n
46
MET
46
A
GLY
47
n
47
GLY
47
A
PRO
48
n
48
PRO
48
A
GLY
49
n
49
GLY
49
A
VAL
50
n
50
VAL
50
A
SER
51
n
51
SER
51
A
TYR
52
n
52
TYR
52
A
LEU
53
n
53
LEU
53
A
VAL
54
n
54
VAL
54
A
ARG
55
n
55
ARG
55
A
TYR
56
n
56
TYR
56
A
MET
57
n
57
MET
57
A
GLY
58
n
58
GLY
58
A
CYS
59
n
59
CYS
59
A
VAL
60
n
60
VAL
60
A
GLU
61
n
61
GLU
61
A
VAL
62
n
62
VAL
62
A
LEU
63
n
63
LEU
63
A
GLN
64
n
64
GLN
64
A
SER
65
n
65
SER
65
A
MET
66
n
66
MET
66
A
ARG
67
n
67
ARG
67
A
ALA
68
n
68
ALA
68
A
LEU
69
n
69
LEU
69
A
ASP
70
n
70
ASP
70
A
PHE
71
n
71
PHE
71
A
ASN
72
n
72
ASN
72
A
THR
73
n
73
THR
73
A
ARG
74
n
74
ARG
74
A
THR
75
n
75
THR
75
A
GLN
76
n
76
GLN
76
A
VAL
77
n
77
VAL
77
A
THR
78
n
78
THR
78
A
ARG
79
n
79
ARG
79
A
GLU
80
n
80
GLU
80
A
ALA
81
n
81
ALA
81
A
ILE
82
n
82
ILE
82
A
SER
83
n
83
SER
83
A
LEU
84
n
84
LEU
84
A
VAL
85
n
85
VAL
85
A
CYS
86
n
86
CYS
86
A
GLU
87
n
87
GLU
87
A
ALA
88
n
88
ALA
88
A
VAL
89
n
89
VAL
89
A
PRO
90
n
90
PRO
90
A
GLY
91
n
91
GLY
91
A
ALA
92
n
92
ALA
92
A
LYS
93
n
93
LYS
93
A
GLY
94
n
94
GLY
94
A
ALA
95
n
95
ALA
95
A
THR
96
n
96
THR
96
A
ARG
97
n
97
ARG
97
A
ARG
98
n
98
ARG
98
A
ARG
99
n
99
ARG
99
A
LYS
100
n
100
LYS
100
A
PRO
101
n
101
PRO
101
A
CYS
102
n
102
CYS
102
A
SER
103
n
103
SER
103
A
ARG
104
n
104
ARG
104
A
PRO
105
n
105
PRO
105
A
LEU
106
n
106
LEU
106
A
SER
107
n
107
SER
107
A
SER
108
n
108
SER
108
A
ILE
109
n
109
ILE
109
A
LEU
110
n
110
LEU
110
A
GLY
111
n
111
GLY
111
A
ARG
112
n
112
ARG
112
A
SER
113
n
113
SER
113
A
ASN
114
n
114
ASN
114
A
LEU
115
n
115
LEU
115
A
LYS
116
n
116
LYS
116
A
PHE
117
n
117
PHE
117
A
ALA
118
n
118
ALA
118
A
GLY
119
n
119
GLY
119
A
MET
120
n
120
MET
120
A
PRO
121
n
121
PRO
121
A
ILE
122
n
122
ILE
122
A
THR
123
n
123
THR
123
A
LEU
124
n
124
LEU
124
A
THR
125
n
125
THR
125
A
VAL
126
n
126
VAL
126
A
SER
127
n
127
SER
127
A
THR
128
n
128
THR
128
A
SER
129
n
129
SER
129
A
SER
130
n
130
SER
130
A
LEU
131
n
131
LEU
131
A
ASN
132
n
132
ASN
132
A
LEU
133
n
133
LEU
133
A
MET
134
n
134
MET
134
A
ALA
135
n
135
ALA
135
A
ALA
136
n
136
ALA
136
A
ASP
137
n
137
ASP
137
A
CYS
138
n
138
CYS
138
A
LYS
139
n
139
LYS
139
A
GLN
140
n
140
GLN
140
A
ILE
141
n
141
ILE
141
A
ILE
142
n
142
ILE
142
A
ALA
143
n
143
ALA
143
A
ASN
144
n
144
ASN
144
A
HIS
145
n
145
HIS
145
A
HIS
146
n
146
HIS
146
A
MET
147
n
147
MET
147
A
GLN
148
n
148
GLN
148
A
SER
149
n
149
SER
149
A
ILE
150
n
150
ILE
150
A
SER
151
n
151
SER
151
A
PHE
152
n
152
PHE
152
A
ALA
153
n
153
ALA
153
A
SER
154
n
154
SER
154
A
GLY
155
n
155
GLY
155
A
GLY
156
n
156
GLY
156
A
ASP
157
n
157
ASP
157
A
PRO
158
n
158
PRO
158
A
ASP
159
n
159
ASP
159
A
THR
160
n
160
THR
160
A
ALA
161
n
161
ALA
161
A
GLU
162
n
162
GLU
162
A
TYR
163
n
163
TYR
163
A
VAL
164
n
164
VAL
164
A
ALA
165
n
165
ALA
165
A
TYR
166
n
166
TYR
166
A
VAL
167
n
167
VAL
167
A
ALA
168
n
168
ALA
168
A
LYS
169
n
169
LYS
169
A
ASP
170
n
170
ASP
170
A
PRO
171
n
171
PRO
171
A
VAL
172
n
172
VAL
172
A
ASN
173
n
173
ASN
173
A
GLN
174
n
174
GLN
174
A
ARG
175
n
175
ARG
175
A
ALA
176
n
176
ALA
176
A
CYS
177
n
177
CYS
177
A
HIS
178
n
178
HIS
178
A
ILE
179
n
179
ILE
179
A
LEU
180
n
180
LEU
180
A
GLU
181
n
181
GLU
181
A
CYS
182
n
182
CYS
182
A
PRO
183
n
183
PRO
183
A
GLU
184
n
184
GLU
184
A
GLY
185
n
185
GLY
185
A
LEU
186
n
186
LEU
186
A
ALA
187
n
187
ALA
187
A
GLN
188
n
188
GLN
188
A
ASP
189
n
189
ASP
189
A
VAL
190
n
190
VAL
190
A
ILE
191
n
191
ILE
191
A
SER
192
n
192
SER
192
A
THR
193
n
193
THR
193
A
ILE
194
n
194
ILE
194
A
GLY
195
n
195
GLY
195
A
GLN
196
n
196
GLN
196
A
ALA
197
n
197
ALA
197
A
PHE
198
n
198
PHE
198
A
GLU
199
n
199
GLU
199
A
LEU
200
n
200
LEU
200
A
ARG
201
n
201
ARG
201
A
PHE
202
n
202
PHE
202
A
LYS
203
n
203
LYS
203
A
GLN
204
n
204
GLN
204
A
TYR
205
n
205
TYR
205
A
LEU
206
n
206
LEU
206
A
ARG
207
n
207
ARG
207
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
MET
134
A
O
MET
134
A
N
THR
123
A
N
THR
123
A
O
ILE
122
A
O
ILE
122
A
N
VAL
54
A
N
VAL
54
A
N
MET
57
A
N
MET
57
A
O
ILE
179
A
O
ILE
179
A
O
HIS
178
A
O
HIS
178
A
N
TYR
166
A
N
TYR
166
A
N
CYS
59
A
N
CYS
59
A
O
ASN
114
A
O
ASN
114
1
A
LYS
3
-119.45
-74.91
1
A
ARG
10
62.13
160.91
1
A
THR
12
-148.89
-58.51
1
A
ARG
13
66.66
-179.06
1
A
GLN
18
-153.70
76.89
1
A
TRP
24
62.89
137.78
1
A
ARG
26
-144.23
35.63
1
A
ASN
32
52.78
81.98
1
A
LYS
33
178.05
-52.01
1
A
THR
35
-152.84
68.04
1
A
LEU
39
68.70
-67.08
1
A
PRO
41
-38.88
156.21
1
A
VAL
45
-95.61
-67.23
1
A
LEU
63
-105.51
41.18
1
A
MET
66
-93.62
32.75
1
A
ARG
67
-179.74
60.50
1
A
LEU
69
59.65
141.03
1
A
PHE
71
177.74
-66.71
1
A
ASN
72
-164.36
-40.22
1
A
THR
73
86.94
5.05
1
A
VAL
77
-57.10
-75.27
1
A
VAL
89
-111.63
70.23
1
A
THR
96
-137.19
-158.00
1
A
ARG
97
170.80
142.46
1
A
ARG
98
72.30
-71.81
1
A
LYS
100
-177.53
134.59
1
A
CYS
102
51.88
176.44
1
A
SER
103
-170.74
-82.68
1
A
PRO
105
-51.95
-75.54
1
A
LEU
106
-148.90
-56.67
1
A
LEU
110
83.47
142.76
1
A
ARG
112
-177.11
138.50
1
A
LEU
115
-111.90
64.11
1
A
THR
128
-54.56
104.80
1
A
SER
130
177.94
109.30
1
A
ALA
135
-57.24
109.62
1
A
SER
151
-126.11
-83.13
1
A
ALA
153
175.09
-64.70
1
A
SER
154
-161.61
62.37
1
A
ASP
157
-154.76
-66.82
1
A
ASP
159
-157.20
-59.90
1
A
THR
160
-172.48
-62.45
1
A
ALA
161
-174.80
-67.24
1
A
ASN
173
-147.82
41.04
1
A
GLN
174
180.00
-79.23
1
A
ARG
175
54.00
103.89
1
A
ALA
187
-33.88
-33.17
1
A
GLN
196
-166.68
115.07
1
A
ALA
197
-60.43
82.20
1
A
GLU
199
-139.45
-70.31
1
A
LEU
200
40.34
98.61
1
A
LYS
203
-48.55
-79.35
1
A
GLN
204
-159.39
-65.75
1
A
TYR
205
-130.68
-53.28
Coupling of Folding and Binding in the PTB Domain of the Signaling Protein Shc
1
N
N
A
PRO
41
A
PRO
41
HELX_P
A
GLY
47
A
GLY
47
1
1
7
A
THR
73
A
THR
73
HELX_P
A
VAL
89
A
VAL
89
1
2
17
A
LEU
186
A
LEU
186
HELX_P
A
THR
193
A
THR
193
1
3
8
SIGNALING PROTEIN
Free Protein, Beta Sandwich, SIGNALING PROTEIN
SHC1_HUMAN
UNP
1
111
P29353
MNKLSGGGGRRTRVEGGQLGGEEWTRHGSFVNKPTRGWLHPNDKVMGPGVSYLVRYMGCVEVLQSMRALDFNTRTQVTRE
AISLVCEAVPGAKGATRRRKPCSRPLSSILGRSNLKFAGMPITLTVSTSSLNLMAADCKQIIANHHMQSISFASGGDPDT
AEYVAYVAKDPVNQRACHILECPEGLAQDVISTIGQAFELRFKQYLR
111
317
1N3H
1
207
P29353
A
1
1
207
5
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
SER
130
A
SER
130
A
ALA
135
A
ALA
135
A
MET
120
A
MET
120
A
SER
127
A
SER
127
A
VAL
50
A
VAL
50
A
MET
57
A
MET
57
A
ALA
176
A
ALA
176
A
GLU
181
A
GLU
181
A
VAL
164
A
VAL
164
A
ALA
168
A
ALA
168
A
CYS
59
A
CYS
59
A
GLU
61
A
GLU
61
A
ARG
112
A
ARG
112
A
ASN
114
A
ASN
114