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12.633
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11.688
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1.246
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1.814
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1.236
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10.354
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11.475
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2.886
10.019
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10.722
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15.383
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11.651
-2.281
15.674
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15.618
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11.209
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16.265
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1.469
16.014
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1.821
16.059
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1.230
14.979
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1.563
17.301
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2.600
18.225
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0.978
16.606
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1.576
15.265
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14.430
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6.590
-0.612
14.360
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-1.148
13.546
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13.054
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0.23
3.999
0.073
12.152
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3.459
-1.008
11.583
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3.563
1.314
11.884
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2.375
12.472
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5.113
2.379
13.340
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5.529
1.118
13.588
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11.297
1.720
15.026
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11.431
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16.763
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0.564
17.731
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16.521
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1.546
16.997
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2.663
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10.956
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3.692
3.361
12.244
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3.906
18.532
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10.501
3.597
18.256
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8.675
4.435
19.853
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8.533
4.900
17.409
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9.064
6.216
17.296
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8.021
7.295
17.595
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6.910
7.181
16.713
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7.431
7.465
18.966
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6.926
8.788
19.240
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6.261
6.563
18.844
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5.739
6.839
17.462
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5.189
5.614
16.872
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5.796
4.410
16.897
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3.443
16.328
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3.970
4.086
15.890
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2.843
3.624
15.207
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2.682
2.357
14.830
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1.891
4.516
14.928
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2.035
5.778
15.296
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3.045
6.342
15.946
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3.997
5.418
16.216
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6.338
16.272
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9.908
6.317
17.977
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8.307
17.365
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19.658
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6.495
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19.092
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5.520
7.103
19.431
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4.982
7.579
17.655
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6.779
4.480
17.395
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1.848
2.111
14.316
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3.387
1.667
15.055
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1.202
6.407
15.004
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6.257
9.202
20.650
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6.105
10.674
20.682
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7.006
8.510
21.723
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4.790
8.550
20.568
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3.915
9.049
19.557
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2.757
8.087
19.309
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3.244
6.787
19.044
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1.705
7.911
20.349
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0.382
8.220
19.905
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1.869
6.462
20.661
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2.214
5.846
19.351
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2.994
4.597
19.434
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2.669
3.493
18.676
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1.688
3.488
17.937
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3.473
2.400
18.786
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4.558
2.327
19.586
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5.564
1.408
19.360
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4.860
3.499
20.375
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4.064
4.584
20.257
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4.509
9.189
18.657
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3.530
10.024
19.855
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2.114
8.086
18.438
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2.117
8.285
21.303
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2.504
6.260
21.482
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0.852
6.157
20.794
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1.351
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18.719
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6.470
1.762
19.084
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5.693
3.507
21.091
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6
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4.216
5.528
20.788
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-0.671
8.813
20.952
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7
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-1.345
9.981
20.342
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0.007
8.940
22.261
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7
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-1.724
7.621
21.048
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7
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-2.592
7.458
19.933
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-3.113
6.043
19.895
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0.26
-1.993
5.160
19.765
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-3.855
5.603
21.129
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-5.052
4.834
21.032
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-2.819
4.738
21.735
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-2.237
4.008
20.573
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-0.956
3.328
20.887
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-0.638
2.122
20.256
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0.26
-1.396
1.579
19.457
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0.593
1.557
20.605
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1.498
2.094
21.514
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0.28
2.559
1.530
21.783
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1.065
3.339
22.103
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1
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1.00
1
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0.27
1.946
4.039
23.115
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7
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1
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1.00
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0.22
-0.108
3.904
21.786
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7
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0.39
-2.037
7.681
19.022
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1
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0.38
-3.420
8.160
20.032
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7
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1
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1
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0.34
-3.821
5.796
19.121
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-3.839
6.383
21.883
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7
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0.28
-2.188
5.303
22.370
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7
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1
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0.27
-3.384
3.995
22.231
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1
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0.27
-3.032
3.339
20.281
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1
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0.841
0.686
20.145
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7
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1
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0.37
1.938
5.101
22.878
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7
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1
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1.00
1
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0.30
1.511
3.931
24.105
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7
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1
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1.00
1
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0.44
2.958
3.651
23.056
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7
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1
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1.00
1
H
0.23
-0.401
4.856
22.258
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1
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1
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0.34
-6.009
4.860
22.324
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8
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1
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1
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0.41
-6.745
6.144
22.303
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8
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1
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1.00
1
O
0.34
-5.212
4.499
23.521
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8
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1
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1
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0.40
-7.058
3.695
22.034
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0.36
-6.673
2.566
21.260
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1
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0.29
-5.786
1.591
22.017
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8
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1
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1.00
1
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0.23
-4.488
2.066
22.335
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8
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DT
1
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1.00
1
O
0.29
-6.276
1.003
23.324
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8
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DT
1
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1.00
1
C
0.34
-6.711
-0.352
23.389
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8
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DT
1
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1.00
1
O
0.24
-5.102
1.178
24.206
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8
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DT
1
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1
C
0.21
-3.977
1.100
23.269
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8
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DT
1
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1.00
1
C
0.19
-2.804
1.645
23.933
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8
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1
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1.00
1
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0.20
-1.669
0.877
24.039
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8
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1
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1.00
1
C
0.23
-1.579
-0.261
23.591
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8
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1
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1.00
1
O
0.22
-0.615
1.469
24.695
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8
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1
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1.00
1
N
0.23
-0.595
2.736
25.242
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8
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1
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1.00
1
C
0.26
0.408
3.166
25.811
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8
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1
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1.00
1
O
0.22
-1.832
3.448
25.072
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8
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C5
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1
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1.00
1
C
0.26
-1.934
4.831
25.621
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8
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C7
DT
1
8
1.00
1
C
0.21
-2.880
2.896
24.437
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8
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1
8
1.00
1
C
0.40
-6.134
2.921
20.381
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8
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H5'
DT
1
8
1.00
1
H
0.43
-7.577
2.048
20.945
A
H5''
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8
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A
H5''
DT
1
8
1.00
1
H
0.32
-5.560
0.731
21.395
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8
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H4'
DT
1
8
1.00
1
H
0.33
-6.651
1.827
23.962
A
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8
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A
H3'
DT
1
8
1.00
1
H
0.27
-5.148
1.975
24.879
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DT
8
ATOM
A
H2'
DT
1
8
1.00
1
H
0.28
-5.000
0.284
24.796
A
H2''
DT
8
ATOM
A
H2''
DT
1
8
1.00
1
H
0.25
-3.812
0.089
22.992
A
H1'
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8
ATOM
A
H1'
DT
1
8
1.00
1
H
0.23
0.210
0.893
24.772
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H3
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8
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A
H3
DT
1
8
1.00
1
H
0.44
-2.136
5.484
24.776
A
H71
DT
8
ATOM
A
H71
DT
1
8
1.00
1
H
0.35
-2.741
4.813
26.349
A
H72
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8
ATOM
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H72
DT
1
8
1.00
1
H
0.42
-0.966
5.031
26.079
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24.405
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24.756
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25.700
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25.861
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26.652
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27.367
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26.796
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29.386
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-2.346
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30.095
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29.852
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25.633
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27.387
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29.311
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28.891
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10
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10
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-2.018
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10
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29.306
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10
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-2.341
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11
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11
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30.612
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11
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31.991
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11
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33.129
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11
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11
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33.570
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11
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32.584
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11
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32.665
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32.666
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11
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33.692
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11
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33.399
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11
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32.439
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11
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32.388
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11
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0.754
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33.393
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-2.310
33.799
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11
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35.444
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11
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36.452
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35.058
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34.027
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33.906
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32.845
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34.525
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31.646
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32.494
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32.790
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34.607
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31.805
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35.162
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4.173
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1
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37.425
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1
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37.208
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1
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37.551
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1
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35.762
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1
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35.172
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1
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6.400
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35.912
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1
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5.158
2.691
36.771
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1
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3.913
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36.057
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1
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36.250
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1
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3.867
0.285
37.015
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1
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2.216
0.795
35.567
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1
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34.729
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1
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0.530
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34.058
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1
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2.220
2.973
34.535
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1
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0.36
3.346
3.259
35.219
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1
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5.315
6.330
38.493
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1
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6.079
6.936
37.001
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1
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4.645
37.841
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1
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35.100
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2.339
34.987
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2.665
36.493
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5.372
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37.449
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1
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34.219
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2
1
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0.48
0.188
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33.345
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33.862
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35.076
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3
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3
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3
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3
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24.912
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3
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25.783
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3
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26.528
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3
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27.125
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3
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0.361
27.522
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3
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1.038
27.975
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3
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0.141
27.870
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3
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0.243
28.184
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3
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28.683
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3
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-0.843
27.952
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3
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2.400
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27.446
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3
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3.659
-2.150
27.113
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3
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4.396
-1.049
27.356
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3
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9.021
-2.231
29.428
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3
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10.373
-1.876
28.336
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3
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-3.710
27.502
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3
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-1.840
25.798
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3
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-0.470
26.324
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3
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-1.048
24.764
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3
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-2.593
25.856
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3
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0.784
27.467
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3
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1.074
1.468
28.793
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3
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2.694
2.117
28.956
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3
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0.22
1.725
-2.786
27.285
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3
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H
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9.137
-2.969
23.382
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4
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P
0.36
10.589
-2.676
23.377
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4
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4
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O
0.33
8.207
-1.945
22.856
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4
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4
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O
0.26
8.937
-4.325
22.531
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4
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O
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7.822
-5.214
22.610
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4
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C
0.22
6.483
-4.605
22.224
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4
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4
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C
0.23
6.069
-3.632
23.168
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4
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4
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O
0.19
6.231
-3.974
20.846
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4
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4
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C
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5.506
-4.614
19.790
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4
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4
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O
0.18
5.555
-2.703
21.306
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4
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4
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C
0.20
4.882
-3.099
22.573
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4
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4
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C
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4.573
-1.860
23.270
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4
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N9
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4
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N
0.21
5.422
-0.813
23.457
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4
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C8
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2
4
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C
0.21
4.904
0.190
24.099
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4
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N7
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4
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0.21
3.612
-0.238
24.352
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4
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2
4
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1
C
0.23
2.554
0.371
25.000
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4
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1
C
0.26
2.675
1.595
25.518
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4
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1
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1.410
-0.326
25.079
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4
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4
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1
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0.22
1.318
-1.545
24.550
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4
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2
4
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1
C
0.21
2.259
-2.218
23.912
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4
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N3
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2
4
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1
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0.20
3.396
-1.492
23.850
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4
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C4
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4
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1
C
0.30
7.754
-5.572
23.637
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4
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4
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0.30
8.019
-6.059
21.950
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4
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4
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0.28
5.760
-5.417
22.318
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4
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4
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H
0.23
7.199
-3.668
20.451
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4
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4
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1
H
0.22
6.321
-1.947
21.455
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4
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4
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0.26
4.802
-2.338
20.612
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4
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4
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4.056
-3.801
22.462
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4
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2
4
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1
H
0.22
6.451
-0.806
23.099
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H8
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2
4
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1
H
0.32
1.907
2.090
25.958
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H61
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B
H61
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2
4
1.00
1
H
0.34
3.578
2.042
25.466
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H62
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4
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B
H62
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2
4
1.00
1
H
0.25
0.357
-2.050
24.652
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4
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H2
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2
4
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1
H
0.25
5.476
-6.219
19.587
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P
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5
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P
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2
5
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1
P
0.30
6.690
-6.815
20.182
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5
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B
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2
5
1.00
1
O
0.33
5.125
-6.485
18.174
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5
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2
5
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1
O
0.31
4.211
-6.586
20.491
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5
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2
5
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1
O
0.39
3.795
-7.939
20.616
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5
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C5'
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2
5
1.00
1
C
0.39
2.411
-8.194
20.027
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5
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B
C4'
DA
2
5
1.00
1
C
0.36
1.437
-7.356
20.656
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5
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O4'
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2
5
1.00
1
O
0.38
2.131
-8.071
18.543
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5
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B
C3'
DA
2
5
1.00
1
C
0.43
1.004
-8.818
18.080
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5
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B
O3'
DA
2
5
1.00
1
O
0.30
1.788
-6.617
18.483
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5
ATOM
B
C2'
DA
2
5
1.00
1
C
0.31
0.901
-6.430
19.702
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5
ATOM
B
C1'
DA
2
5
1.00
1
C
0.26
1.108
-5.082
20.247
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N9
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5
ATOM
B
N9
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2
5
1.00
1
N
0.25
2.311
-4.485
20.446
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C8
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5
ATOM
B
C8
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2
5
1.00
1
C
0.22
2.252
-3.279
20.925
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N7
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5
ATOM
B
N7
DA
2
5
1.00
1
N
0.21
0.890
-3.059
21.056
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C5
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5
ATOM
B
C5
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2
5
1.00
1
C
0.22
0.164
-1.960
21.516
B
C6
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5
ATOM
B
C6
DA
2
5
1.00
1
C
0.22
0.730
-0.832
21.942
B
N6
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5
ATOM
B
N6
DA
2
5
1.00
1
N
0.25
-1.166
-2.065
21.518
B
N1
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5
ATOM
B
N1
DA
2
5
1.00
1
N
0.26
-1.745
-3.178
21.096
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C2
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5
ATOM
B
C2
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2
5
1.00
1
C
0.27
-1.175
-4.286
20.638
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N3
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5
ATOM
B
N3
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2
5
1.00
1
N
0.24
0.172
-4.154
20.646
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C4
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5
ATOM
B
C4
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2
5
1.00
1
C
0.47
3.774
-8.175
21.679
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DA
5
ATOM
B
H5'
DA
2
5
1.00
1
H
0.47
4.527
-8.578
20.123
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5
ATOM
B
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2
5
1.00
1
H
0.47
2.162
-9.218
20.308
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5
ATOM
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H4'
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2
5
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1
H
0.41
2.998
-8.341
17.941
B
H3'
DA
5
ATOM
B
H3'
DA
2
5
1.00
1
H
0.30
2.736
-6.095
18.585
B
H2'
DA
5
ATOM
B
H2'
DA
2
5
1.00
1
H
0.32
1.300
-6.317
17.560
B
H2''
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5
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B
H2''
DA
2
5
1.00
1
H
0.38
-0.150
-6.622
19.506
B
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5
ATOM
B
H1'
DA
2
5
1.00
1
H
0.28
3.256
-4.970
20.231
B
H8
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5
ATOM
B
H8
DA
2
5
1.00
1
H
0.26
0.127
-0.096
22.281
B
H61
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5
ATOM
B
H61
DA
2
5
1.00
1
H
0.25
1.736
-0.728
21.926
B
H62
DA
5
ATOM
B
H62
DA
2
5
1.00
1
H
0.29
-2.831
-3.156
21.145
B
H2
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5
ATOM
B
H2
DA
2
5
1.00
1
H
0.46
0.549
-8.842
16.532
B
P
D00
6
HETATM
B
P
D00
2
6
1.00
1
P
0.57
-0.455
-9.916
16.358
B
OP1
D00
6
HETATM
B
OP1
D00
2
6
1.00
1
O
0.48
1.771
-8.830
15.697
B
OP2
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6
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B
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D00
2
6
1.00
1
O
0.41
-0.194
-7.430
16.344
B
O5'
D00
6
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B
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D00
2
6
1.00
1
O
0.39
-1.378
-7.220
17.103
B
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D00
6
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B
C5'
D00
2
6
1.00
1
C
0.35
-1.745
-5.752
17.178
B
C4'
D00
6
HETATM
B
C4'
D00
2
6
1.00
1
C
0.31
-0.638
-4.983
17.635
B
O4'
D00
6
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B
O4'
D00
2
6
1.00
1
O
0.34
-2.228
-5.031
15.951
B
C3'
D00
6
HETATM
B
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D00
2
6
1.00
1
C
0.38
-3.510
-4.437
16.080
B
O3'
D00
6
HETATM
B
O3'
D00
2
6
1.00
1
O
0.29
-1.129
-4.019
15.769
B
C2'
D00
6
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B
C2'
D00
2
6
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1
C
0.27
-0.785
-3.634
17.183
B
C1'
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6
HETATM
B
C1'
D00
2
6
1.00
1
C
0.23
0.591
-3.131
17.356
B
N1
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6
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B
N1
D00
2
6
1.00
1
N
0.23
-0.054
-1.350
18.620
B
O2
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6
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B
O2
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2
6
1.00
1
O
0.21
2.154
-1.635
18.254
B
N3
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6
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N3
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2
6
1.00
1
N
0.20
3.199
-2.298
17.713
B
C4
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6
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C4
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2
6
1.00
1
C
0.20
4.479
-2.164
18.213
B
N4
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6
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B
N4
D00
2
6
1.00
1
N
0.23
2.888
-3.464
16.929
B
C5
D00
6
HETATM
B
C5
D00
2
6
1.00
1
C
0.24
1.600
-3.830
16.786
B
C6
D00
6
HETATM
B
C6
D00
2
6
1.00
1
C
0.18
5.345
-0.046
19.346
B
C10
D00
6
HETATM
B
C10
D00
2
6
1.00
1
C
0.19
5.193
-0.881
18.290
B
C11
D00
6
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B
C11
D00
2
6
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1
C
0.48
-2.199
-7.791
16.670
B
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6
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B
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2
6
1.00
1
H
0.42
-1.184
-7.612
18.099
B
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6
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B
H5'
D00
2
6
1.00
1
H
0.39
-2.533
-5.648
17.924
B
H4'
D00
6
HETATM
B
H4'
D00
2
6
1.00
1
H
0.40
-2.261
-5.712
15.101
B
H3'
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6
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B
H3'
D00
2
6
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1
H
0.28
-1.479
-3.164
15.198
B
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D00
6
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B
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D00
2
6
1.00
1
H
0.33
-0.321
-4.532
15.253
B
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6
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B
H2'
D00
2
6
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1
H
0.31
-1.562
-3.072
17.702
B
H1'
D00
6
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B
H1'
D00
2
6
1.00
1
H
0.23
4.904
-2.979
18.638
B
H41
D00
6
HETATM
B
H41
D00
2
6
1.00
1
H
0.28
3.680
-4.046
16.457
B
H5
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6
HETATM
B
H5
D00
2
6
1.00
1
H
0.27
1.398
-4.717
16.191
B
H6
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6
HETATM
B
H6
D00
2
6
1.00
1
H
0.31
4.372
-0.265
19.786
B
H12
D00
6
HETATM
B
H12
D00
2
6
1.00
1
H
0.31
6.125
-0.532
19.931
B
H11
D00
6
HETATM
B
H11
D00
2
6
1.00
1
H
0.30
4.747
-0.179
17.585
B
H13
D00
6
HETATM
B
H13
D00
2
6
1.00
1
H
0.36
-4.450
-4.347
14.787
B
P
DT
7
ATOM
B
P
DT
2
7
1.00
1
P
0.47
-5.806
-4.817
15.151
B
OP1
DT
7
ATOM
B
OP1
DT
2
7
1.00
1
O
0.46
-3.729
-4.956
13.648
B
OP2
DT
7
ATOM
B
OP2
DT
2
7
1.00
1
O
0.35
-4.511
-2.772
14.556
B
O5'
DT
7
ATOM
B
O5'
DT
2
7
1.00
1
O
0.33
-5.313
-2.035
15.468
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C5'
DT
7
ATOM
B
C5'
DT
2
7
1.00
1
C
0.29
-4.866
-0.598
15.505
B
C4'
DT
7
ATOM
B
C4'
DT
2
7
1.00
1
C
0.25
-3.496
-0.567
15.930
B
O4'
DT
7
ATOM
B
O4'
DT
2
7
1.00
1
O
0.26
-4.906
0.119
14.172
B
C3'
DT
7
ATOM
B
C3'
DT
2
7
1.00
1
C
0.30
-5.366
1.459
14.070
B
O3'
DT
7
ATOM
B
O3'
DT
2
7
1.00
1
O
0.23
-3.447
0.109
13.854
B
C2'
DT
7
ATOM
B
C2'
DT
2
7
1.00
1
C
0.22
-2.809
0.435
15.179
B
C1'
DT
7
ATOM
B
C1'
DT
2
7
1.00
1
C
0.21
-1.349
0.167
15.195
B
N1
DT
7
ATOM
B
N1
DT
2
7
1.00
1
N
0.22
-0.507
0.974
15.966
B
C2
DT
7
ATOM
B
C2
DT
2
7
1.00
1
C
0.25
-0.928
1.923
16.621
B
O2
DT
7
ATOM
B
O2
DT
2
7
1.00
1
O
0.25
0.855
0.647
15.930
B
N3
DT
7
ATOM
B
N3
DT
2
7
1.00
1
N
0.25
1.412
-0.394
15.197
B
C4
DT
7
ATOM
B
C4
DT
2
7
1.00
1
C
0.28
2.624
-0.612
15.203
B
O4
DT
7
ATOM
B
O4
DT
2
7
1.00
1
O
0.24
0.451
-1.157
14.439
B
C5
DT
7
ATOM
B
C5
DT
2
7
1.00
1
C
0.27
0.922
-2.320
13.587
B
C7
DT
7
ATOM
B
C7
DT
2
7
1.00
1
C
0.22
-0.853
-0.868
14.459
B
C6
DT
7
ATOM
B
C6
DT
2
7
1.00
1
C
0.39
-5.217
-2.485
16.457
B
H5'
DT
7
ATOM
B
H5'
DT
2
7
1.00
1
H
0.39
-6.351
-2.097
15.145
B
H5''
DT
7
ATOM
B
H5''
DT
2
7
1.00
1
H
0.38
-5.470
-0.038
16.220
B
H4'
DT
7
ATOM
B
H4'
DT
2
7
1.00
1
H
0.33
-5.472
-0.471
13.451
B
H3'
DT
7
ATOM
B
H3'
DT
2
7
1.00
1
H
0.28
-3.236
-0.889
13.479
B
H2'
DT
7
ATOM
B
H2'
DT
2
7
1.00
1
H
0.26
-3.209
0.865
13.123
B
H2''
DT
7
ATOM
B
H2''
DT
2
7
1.00
1
H
0.26
-3.056
1.444
15.510
B
H1'
DT
7
ATOM
B
H1'
DT
2
7
1.00
1
H
0.28
1.499
1.209
16.490
B
H3
DT
7
ATOM
B
H3
DT
2
7
1.00
1
H
0.40
0.416
-3.238
13.870
B
H71
DT
7
ATOM
B
H71
DT
2
7
1.00
1
H
0.33
0.713
-2.111
12.539
B
H72
DT
7
ATOM
B
H72
DT
2
7
1.00
1
H
0.40
1.996
-2.441
13.725
B
H73
DT
7
ATOM
B
H73
DT
2
7
1.00
1
H
0.25
-1.496
-1.505
13.860
B
H6
DT
7
ATOM
B
H6
DT
2
7
1.00
1
H
0.34
-5.838
1.922
12.604
B
P
DT
8
ATOM
B
P
DT
2
8
1.00
1
P
0.41
-7.186
1.355
12.372
B
OP1
DT
8
ATOM
B
OP1
DT
2
8
1.00
1
O
0.34
-4.754
1.635
11.634
B
OP2
DT
8
ATOM
B
OP2
DT
2
8
1.00
1
O
0.40
-5.995
3.502
12.747
B
O5'
DT
8
ATOM
B
O5'
DT
2
8
1.00
1
O
0.36
-5.180
4.216
13.666
B
C5'
DT
8
ATOM
B
C5'
DT
2
8
1.00
1
C
0.29
-3.748
4.399
13.194
B
C4'
DT
8
ATOM
B
C4'
DT
2
8
1.00
1
C
0.23
-2.974
3.207
13.123
B
O4'
DT
8
ATOM
B
O4'
DT
2
8
1.00
1
O
0.29
-3.489
5.077
11.859
B
C3'
DT
8
ATOM
B
C3'
DT
2
8
1.00
1
C
0.34
-2.975
6.394
11.805
B
O3'
DT
8
ATOM
B
O3'
DT
2
8
1.00
1
O
0.25
-2.527
4.130
11.220
B
C2'
DT
8
ATOM
B
C2'
DT
2
8
1.00
1
C
0.21
-1.797
3.596
12.397
B
C1'
DT
8
ATOM
B
C1'
DT
2
8
1.00
1
C
0.20
-1.090
2.400
11.956
B
N1
DT
8
ATOM
B
N1
DT
2
8
1.00
1
N
0.20
0.268
2.309
12.152
B
C2
DT
8
ATOM
B
C2
DT
2
8
1.00
1
C
0.23
0.933
3.187
12.691
B
O2
DT
8
ATOM
B
O2
DT
2
8
1.00
1
O
0.22
0.853
1.151
11.694
B
N3
DT
8
ATOM
B
N3
DT
2
8
1.00
1
N
0.22
0.217
0.097
11.071
B
C4
DT
8
ATOM
B
C4
DT
2
8
1.00
1
C
0.26
0.844
-0.894
10.699
B
O4
DT
8
ATOM
B
O4
DT
2
8
1.00
1
O
0.22
-1.195
0.297
10.920
B
C5
DT
8
ATOM
B
C5
DT
2
8
1.00
1
C
0.26
-2.006
-0.779
10.258
B
C7
DT
8
ATOM
B
C7
DT
2
8
1.00
1
C
0.21
-1.795
1.409
11.353
B
C6
DT
8
ATOM
B
C6
DT
2
8
1.00
1
C
0.42
-5.171
3.669
14.609
B
H5'
DT
8
ATOM
B
H5'
DT
2
8
1.00
1
H
0.44
-5.627
5.197
13.822
B
H5''
DT
8
ATOM
B
H5''
DT
2
8
1.00
1
H
0.33
-3.263
5.027
13.943
B
H4'
DT
8
ATOM
B
H4'
DT
2
8
1.00
1
H
0.37
-4.402
5.046
11.266
B
H3'
DT
8
ATOM
B
H3'
DT
2
8
1.00
1
H
0.29
-3.113
3.390
10.680
B
H2'
DT
8
ATOM
B
H2'
DT
2
8
1.00
1
H
0.31
-1.843
4.635
10.549
B
H2''
DT
8
ATOM
B
H2''
DT
2
8
1.00
1
H
0.25
-1.172
4.335
12.901
B
H1'
DT
8
ATOM
B
H1'
DT
2
8
1.00
1
H
0.24
1.850
1.097
11.835
B
H3
DT
8
ATOM
B
H3
DT
2
8
1.00
1
H
0.39
-2.490
-0.374
9.370
B
H71
DT
8
ATOM
B
H71
DT
2
8
1.00
1
H
0.39
-1.346
-1.599
9.974
B
H72
DT
8
ATOM
B
H72
DT
2
8
1.00
1
H
0.40
-2.763
-1.143
10.953
B
H73
DT
8
ATOM
B
H73
DT
2
8
1.00
1
H
0.27
-2.871
1.498
11.208
B
H6
DT
8
ATOM
B
H6
DT
2
8
1.00
1
H
0.33
-2.902
7.138
10.385
B
P
DT
9
ATOM
B
P
DT
2
9
1.00
1
P
0.49
-4.274
7.542
10.007
B
OP1
DT
9
ATOM
B
OP1
DT
2
9
1.00
1
O
0.33
-2.084
6.339
9.442
B
OP2
DT
9
ATOM
B
OP2
DT
2
9
1.00
1
O
0.47
-2.096
8.444
10.796
B
O5'
DT
9
ATOM
B
O5'
DT
2
9
1.00
1
O
0.48
-1.134
8.370
11.842
B
C5'
DT
9
ATOM
B
C5'
DT
2
9
1.00
1
C
0.41
0.189
7.791
11.377
B
C4'
DT
9
ATOM
B
C4'
DT
2
9
1.00
1
C
0.34
0.232
6.390
11.099
B
O4'
DT
9
ATOM
B
O4'
DT
2
9
1.00
1
O
0.37
0.714
8.410
10.088
B
C3'
DT
9
ATOM
B
C3'
DT
2
9
1.00
1
C
0.35
1.852
9.264
10.110
B
O3'
DT
9
ATOM
B
O3'
DT
2
9
1.00
1
O
0.29
0.996
7.199
9.248
B
C2'
DT
9
ATOM
B
C2'
DT
2
9
1.00
1
C
0.26
1.408
6.209
10.279
B
C1'
DT
9
ATOM
B
C1'
DT
2
9
1.00
1
C
0.22
1.400
4.850
9.738
B
N1
DT
9
ATOM
B
N1
DT
2
9
1.00
1
N
0.20
2.544
4.070
9.836
B
C2
DT
9
ATOM
B
C2
DT
2
9
1.00
1
C
0.22
3.587
4.469
10.353
B
O2
DT
9
ATOM
B
O2
DT
2
9
1.00
1
O
0.19
2.445
2.794
9.304
B
N3
DT
9
ATOM
B
N3
DT
2
9
1.00
1
N
0.19
1.324
2.250
8.701
B
C4
DT
9
ATOM
B
C4
DT
2
9
1.00
1
C
0.22
1.353
1.100
8.259
B
O4
DT
9
ATOM
B
O4
DT
2
9
1.00
1
O
0.21
0.191
3.151
8.654
B
C5
DT
9
ATOM
B
C5
DT
2
9
1.00
1
C
0.24
-1.105
2.683
8.028
B
C7
DT
9
ATOM
B
C7
DT
2
9
1.00
1
C
0.23
0.261
4.391
9.160
B
C6
DT
9
ATOM
B
C6
DT
2
9
1.00
1
C
0.52
-1.530
7.777
12.667
B
H5'
DT
9
ATOM
B
H5'
DT
2
9
1.00
1
H
0.59
-0.960
9.391
12.179
B
H5''
DT
9
ATOM
B
H5''
DT
2
9
1.00
1
H
0.45
0.930
7.991
12.152
B
H4'
DT
9
ATOM
B
H4'
DT
2
9
1.00
1
H
0.45
-0.099
8.951
9.605
B
H3'
DT
9
ATOM
B
H3'
DT
2
9
1.00
1
H
0.35
0.083
6.922
8.724
B
H2'
DT
9
ATOM
B
H2'
DT
2
9
1.00
1
H
0.31
1.801
7.390
8.552
B
H2''
DT
9
ATOM
B
H2''
DT
2
9
1.00
1
H
0.27
2.338
6.475
10.783
B
H1'
DT
9
ATOM
B
H1'
DT
2
9
1.00
1
H
0.23
3.279
2.219
9.364
B
H3
DT
9
ATOM
B
H3
DT
2
9
1.00
1
H
0.80
-1.903
2.719
8.768
B
H71
DT
9
ATOM
B
H71
DT
2
9
1.00
1
H
0.91
-1.357
3.332
7.189
B
H72
DT
9
ATOM
B
H72
DT
2
9
1.00
1
H
0.93
-0.978
1.660
7.675
B
H73
DT
9
ATOM
B
H73
DT
2
9
1.00
1
H
0.28
-0.613
5.035
9.095
B
H6
DT
9
ATOM
B
H6
DT
2
9
1.00
1
H
0.32
2.227
10.123
8.800
B
P
DC
10
ATOM
B
P
DC
2
10
1.00
1
P
0.42
1.201
11.180
8.656
B
OP1
DC
10
ATOM
B
OP1
DC
2
10
1.00
1
O
0.32
2.470
9.195
7.671
B
OP2
DC
10
ATOM
B
OP2
DC
2
10
1.00
1
O
0.32
3.604
10.844
9.190
B
O5'
DC
10
ATOM
B
O5'
DC
2
10
1.00
1
O
0.30
4.665
10.212
9.903
B
C5'
DC
10
ATOM
B
C5'
DC
2
10
1.00
1
C
0.26
5.375
9.119
9.121
B
C4'
DC
10
ATOM
B
C4'
DC
2
10
1.00
1
C
0.23
4.631
7.904
8.959
B
O4'
DC
10
ATOM
B
O4'
DC
2
10
1.00
1
O
0.28
5.889
9.446
7.732
B
C3'
DC
10
ATOM
B
C3'
DC
2
10
1.00
1
C
0.37
7.263
9.635
7.406
B
O3'
DC
10
ATOM
B
O3'
DC
2
10
1.00
1
O
0.25
5.274
8.314
6.985
B
C2'
DC
10
ATOM
B
C2'
DC
2
10
1.00
1
C
0.20
5.352
7.180
7.942
B
C1'
DC
10
ATOM
B
C1'
DC
2
10
1.00
1
C
0.19
4.557
6.050
7.415
B
N1
DC
10
ATOM
B
N1
DC
2
10
1.00
1
N
0.21
5.089
4.767
7.390
B
C2
DC
10
ATOM
B
C2
DC
2
10
1.00
1
C
0.26
6.220
4.517
7.801
B
O2
DC
10
ATOM
B
O2
DC
2
10
1.00
1
O
0.22
4.312
3.768
6.883
B
N3
DC
10
ATOM
B
N3
DC
2
10
1.00
1
N
0.23
3.071
4.001
6.420
B
C4
DC
10
ATOM
B
C4
DC
2
10
1.00
1
C
0.26
2.350
2.987
5.923
B
N4
DC
10
ATOM
B
N4
DC
2
10
1.00
1
N
0.24
2.523
5.322
6.448
B
C5
DC
10
ATOM
B
C5
DC
2
10
1.00
1
C
0.22
3.301
6.301
6.950
B
C6
DC
10
ATOM
B
C6
DC
2
10
1.00
1
C
0.37
4.271
9.793
10.829
B
H5'
DC
10
ATOM
B
H5'
DC
2
10
1.00
1
H
0.40
5.392
10.986
10.141
B
H5''
DC
10
ATOM
B
H5''
DC
2
10
1.00
1
H
0.33
6.257
8.855
9.705
B
H4'
DC
10
ATOM
B
H4'
DC
2
10
1.00
1
H
0.32
5.370
10.342
7.391
B
H3'
DC
10
ATOM
B
H3'
DC
2
10
1.00
1
H
0.29
4.258
8.615
6.742
B
H2'
DC
10
ATOM
B
H2'
DC
2
10
1.00
1
H
0.31
5.850
8.076
6.092
B
H2''
DC
10
ATOM
B
H2''
DC
2
10
1.00
1
H
0.28
6.372
6.918
8.222
B
H1'
DC
10
ATOM
B
H1'
DC
2
10
1.00
1
H
0.29
2.789
2.078
5.804
B
H41
DC
10
ATOM
B
H41
DC
2
10
1.00
1
H
0.31
1.381
3.117
5.667
B
H42
DC
10
ATOM
B
H42
DC
2
10
1.00
1
H
0.30
1.520
5.538
6.081
B
H5
DC
10
ATOM
B
H5
DC
2
10
1.00
1
H
0.27
2.886
7.305
6.967
B
H6
DC
10
ATOM
B
H6
DC
2
10
1.00
1
H
0.49
7.599
10.512
6.090
B
P
DG
11
ATOM
B
P
DG
2
11
1.00
1
P
0.54
9.068
10.602
5.938
B
OP1
DG
11
ATOM
B
OP1
DG
2
11
1.00
1
O
0.62
6.780
11.744
6.122
B
OP2
DG
11
ATOM
B
OP2
DG
2
11
1.00
1
O
0.51
7.024
9.581
4.923
B
O5'
DG
11
ATOM
B
O5'
DG
2
11
1.00
1
O
0.62
6.649
10.080
3.637
B
C5'
DG
11
ATOM
B
C5'
DG
2
11
1.00
1
C
0.57
5.730
9.047
3.027
B
C4'
DG
11
ATOM
B
C4'
DG
2
11
1.00
1
C
0.50
6.414
7.834
3.301
B
O4'
DG
11
ATOM
B
O4'
DG
2
11
1.00
1
O
0.53
4.452
8.850
3.801
B
C3'
DG
11
ATOM
B
C3'
DG
2
11
1.00
1
C
0.67
3.369
9.699
3.420
B
O3'
DG
11
ATOM
B
O3'
DG
2
11
1.00
1
O
0.46
4.243
7.336
3.790
B
C2'
DG
11
ATOM
B
C2'
DG
2
11
1.00
1
C
0.46
5.450
6.814
3.034
B
C1'
DG
11
ATOM
B
C1'
DG
2
11
1.00
1
C
0.39
6.019
5.555
3.560
B
N9
DG
11
ATOM
B
N9
DG
2
11
1.00
1
N
0.34
6.734
5.414
4.715
B
C8
DG
11
ATOM
B
C8
DG
2
11
1.00
1
C
0.34
7.147
4.203
4.945
B
N7
DG
11
ATOM
B
N7
DG
2
11
1.00
1
N
0.34
6.675
3.476
3.866
B
C5
DG
11
ATOM
B
C5
DG
2
11
1.00
1
C
0.36
6.827
2.096
3.587
B
C6
DG
11
ATOM
B
C6
DG
2
11
1.00
1
C
0.36
7.425
1.249
4.248
B
O6
DG
11
ATOM
B
O6
DG
2
11
1.00
1
O
0.43
6.203
1.745
2.403
B
N1
DG
11
ATOM
B
N1
DG
2
11
1.00
1
N
0.51
5.511
2.615
1.570
B
C2
DG
11
ATOM
B
C2
DG
2
11
1.00
1
C
0.65
4.968
2.099
0.456
B
N2
DG
11
ATOM
B
N2
DG
2
11
1.00
1
N
0.51
5.370
3.925
1.837
B
N3
DG
11
ATOM
B
N3
DG
2
11
1.00
1
N
0.40
5.977
4.287
3.001
B
C4
DG
11
ATOM
B
C4
DG
2
11
1.00
1
C
0.69
7.544
10.201
3.029
B
H5'
DG
11
ATOM
B
H5'
DG
2
11
1.00
1
H
0.71
6.142
11.038
3.747
B
H5''
DG
11
ATOM
B
H5''
DG
2
11
1.00
1
H
0.66
5.559
9.191
1.959
B
H4'
DG
11
ATOM
B
H4'
DG
2
11
1.00
1
H
0.51
4.689
9.124
4.820
B
H3'
DG
11
ATOM
B
H3'
DG
2
11
1.00
1
H
0.94
3.656
10.598
3.603
B
HO3'
DG
11
ATOM
B
HO3'
DG
2
11
1.00
1
H
0.44
4.337
7.016
4.822
B
H2'
DG
11
ATOM
B
H2'
DG
2
11
1.00
1
H
0.55
3.299
6.990
3.368
B
H2''
DG
11
ATOM
B
H2''
DG
2
11
1.00
1
H
0.55
5.238
6.740
1.968
B
H1'
DG
11
ATOM
B
H1'
DG
2
11
1.00
1
H
0.36
6.941
6.248
5.385
B
H8
DG
11
ATOM
B
H8
DG
2
11
1.00
1
H
0.46
6.271
0.756
2.168
B
H1
DG
11
ATOM
B
H1
DG
2
11
1.00
1
H
0.71
5.063
1.111
0.262
B
H21
DG
11
ATOM
B
H21
DG
2
11
1.00
1
H
0.73
4.465
2.690
-0.195
B
H22
DG
11
ATOM
B
H22
DG
2
11
1.00
1
H
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Webba da Silva, M.
Noronha, A.M.
Noll, D.M.
Miller, P.S.
Colvin, O.M.
Gamcsik, M.P.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C11 H18 N3 O7 P
335.250
n
2'-deoxy-N-ethylcytidine 5'-(dihydrogen phosphate)
DNA linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
US
Biochemistry
BICHAW
0033
0006-2960
41
15181
15188
10.1021/bi026368l
12484755
Solution Structure of a DNA Duplex Containing
Mispair-Aligned N4C-Ethyl-N4C
Interstrand Cross-Linked Cytosines
2002
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
x-ray
1
1.0
Interstrand Cross-Linked DNA
3333.198
5'-D(*CP*GP*AP*AP*AP*CP*TP*TP*TP*CP*G)-3'
1
syn
polymer
Interstrand Cross-Linked DNA
3361.251
5'-D(*CP*GP*AP*AP*AP*D00*TP*TP*TP*CP*G)-3'
1
syn
polymer
no
no
(DC)(DG)(DA)(DA)(DA)(DC)(DT)(DT)(DT)(DC)(DG)
CGAAACTTTCG
A
polydeoxyribonucleotide
no
yes
(DC)(DG)(DA)(DA)(DA)(D00)(DT)(DT)(DT)(DC)(DG)
CGAAAXTTTCG
B
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
-2.253
1
19
A
2
B
10
-3.265
A_DG2:DC10_B
1
3.774
-0.634
-0.512
-0.408
20.467
1
20
A
3
B
9
3.706
A_DA3:DT9_B
2
-1.950
0.121
-0.434
-0.135
34.624
1
20
A
4
B
8
2.568
A_DA4:DT8_B
3
-12.747
-0.196
-0.382
-0.377
-34.711
1
20
A
8
B
4
2.579
A_DT8:DA4_B
4
-12.734
0.203
-0.388
-0.364
-20.440
1
20
A
9
B
3
3.830
A_DT9:DA3_B
5
-1.858
-0.110
-0.443
-0.125
2.413
1
19
A
10
B
2
-3.247
A_DC10:DG2_B
6
3.867
0.653
-0.519
-0.407
2.684
36.282
A
A
2
3
4.176
B
B
10
9
2.676
2.598
-0.256
0.225
AA_DG2DA3:DT9DC10_BB
1
0.229
-0.367
36.192
0.064
0.437
2.810
28.495
A
A
3
4
5.116
B
B
9
8
2.798
2.514
-0.343
0.108
AA_DA3DA4:DT8DT9_BB
2
-1.405
2.859
28.352
-0.275
0.421
2.807
28.443
A
A
8
9
5.060
B
B
4
3
2.795
2.482
0.342
0.111
AA_DT8DT9:DA3DA4_BB
3
1.436
-2.928
28.301
-0.263
-0.414
2.681
36.337
A
A
9
10
4.294
B
B
3
2
2.674
2.676
0.252
0.228
AA_DT9DC10:DG2DA3_BB
4
-0.260
0.418
36.240
0.059
-0.434
repository
Initial release
Version format compliance
Version format compliance
Structure summary
1
0
2003-11-04
1
1
2008-04-28
1
2
2011-07-13
1
3
2014-06-25
RCSB
Y
PDBJ
2002-10-30
REL
REL
the structure submitted is the lowest energy structure of a an ensemble of selected ten structures
100
1
2D NOESY
2D TOCSY
DQF-COSY
2D NOESY
100 mM NaCl
7.4
normal
293
K
100 mM NaCl
7.4
normal
273
K
A total of 449 restraints were used
243 non-exchangeable
53 exchangeable
44 hydrogen bond
109 dihedral angle
distance geometry
simulated annealing
molecular dynamics
1
closest to the average,lowest energy
The synthesis by solid phase methods of DNA duplexes that contain an N4-C-ethyl-N4C interstrand cross-link has been described [Biochemistry,41(2002)760-771].
2 mM single strand concentration in 0.3 mL containing 10 mM sodium phosphate (pH 7.4) and 100 mM NaCl.
both 1H2O (95%) and 2H2O (5%), and 99.9 % 2H2O.
Brunger, A.T.
refinement
X-PLOR
3.8
800
Varian
INOVA
600
Varian
INOVA
500
Varian
INOVA
CYT
1
n
1
DC
1
A
GUA
2
n
2
DG
2
A
ADE
3
n
3
DA
3
A
ADE
4
n
4
DA
4
A
ADE
5
n
5
DA
5
A
CYZ
6
n
6
DC
6
A
THY
7
n
7
DT
7
A
THY
8
n
8
DT
8
A
THY
9
n
9
DT
9
A
CYT
10
n
10
DC
10
A
GUA
11
n
11
DG
11
A
CYT
1
n
1
DC
1
B
GUA
2
n
2
DG
2
B
ADE
3
n
3
DA
3
B
ADE
4
n
4
DA
4
B
ADE
5
n
5
DA
5
B
CYZ
6
n
6
D00
6
B
THY
7
n
7
DT
7
B
THY
8
n
8
DT
8
B
THY
9
n
9
DT
9
B
CYT
10
n
10
DC
10
B
GUA
11
n
11
DG
11
B
author_defined_assembly
2
dimeric
B
D00
6
B
D00
6
DC
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
B
C2
D00
6
B
C2
D00
6
1
Y
1
A
B
N4
C10
DC
D00
6
6
1.47
1
A
DC
6
0.109
SIDE CHAIN
1
3.90
0.30
108.30
112.20
A
A
A
O4'
C1'
N1
DC
DC
DC
1
1
1
N
1
-5.31
0.80
105.90
100.59
A
A
A
O4'
C1'
C2'
DG
DG
DG
2
2
2
N
1
-4.74
0.70
108.00
103.26
A
A
A
O4'
C1'
N9
DG
DG
DG
2
2
2
N
1
3.40
0.30
108.30
111.70
A
A
A
O4'
C1'
N9
DA
DA
DA
3
3
3
N
1
-7.81
1.00
110.10
102.29
A
A
A
C1'
O4'
C4'
DA
DA
DA
4
4
4
N
1
-4.28
0.70
102.20
97.92
A
A
A
C4'
C3'
C2'
DA
DA
DA
4
4
4
N
1
-10.93
0.80
105.90
94.97
A
A
A
O4'
C1'
C2'
DA
DA
DA
4
4
4
N
1
-11.10
0.80
105.90
94.80
A
A
A
O4'
C1'
C2'
DC
DC
DC
6
6
6
N
1
-7.13
0.70
108.00
100.87
A
A
A
O4'
C1'
N1
DC
DC
DC
6
6
6
N
1
4.57
0.50
119.90
124.47
A
A
A
C2
N3
C4
DC
DC
DC
6
6
6
N
1
-5.30
0.40
121.90
116.60
A
A
A
N3
C4
C5
DC
DC
DC
6
6
6
N
1
-9.43
0.80
105.90
96.47
A
A
A
O4'
C1'
C2'
DT
DT
DT
7
7
7
N
1
3.98
0.60
118.00
121.98
A
A
A
C4
C5
C6
DT
DT
DT
7
7
7
N
1
-4.69
0.60
122.90
118.21
A
A
A
C6
C5
C7
DT
DT
DT
7
7
7
N
1
-9.77
0.80
105.90
96.13
A
A
A
O4'
C1'
C2'
DT
DT
DT
8
8
8
N
1
7.93
1.10
109.80
117.73
A
A
A
C5'
C4'
O4'
DT
DT
DT
9
9
9
N
1
-10.64
0.80
105.90
95.26
A
A
A
O4'
C1'
C2'
DT
DT
DT
9
9
9
N
1
-3.80
0.60
122.90
119.10
A
A
A
C6
C5
C7
DT
DT
DT
9
9
9
N
1
-6.16
1.00
110.10
103.94
A
A
A
C1'
O4'
C4'
DC
DC
DC
10
10
10
N
1
-13.03
0.80
105.90
92.87
A
A
A
O4'
C1'
C2'
DC
DC
DC
10
10
10
N
1
3.40
0.30
108.30
111.70
A
A
A
O4'
C1'
N1
DC
DC
DC
10
10
10
N
1
-2.62
0.40
104.50
101.88
A
A
A
O4'
C4'
C3'
DG
DG
DG
11
11
11
N
1
3.88
0.30
108.30
112.18
B
B
B
O4'
C1'
N1
DC
DC
DC
1
1
1
N
1
-5.73
0.80
105.90
100.17
B
B
B
O4'
C1'
C2'
DG
DG
DG
2
2
2
N
1
-4.88
0.70
108.00
103.12
B
B
B
O4'
C1'
N9
DG
DG
DG
2
2
2
N
1
-4.44
0.70
102.20
97.76
B
B
B
C4'
C3'
C2'
DA
DA
DA
3
3
3
N
1
2.88
0.30
108.30
111.18
B
B
B
O4'
C1'
N9
DA
DA
DA
3
3
3
N
1
-7.33
1.00
110.10
102.77
B
B
B
C1'
O4'
C4'
DA
DA
DA
4
4
4
N
1
-11.43
0.80
105.90
94.47
B
B
B
O4'
C1'
C2'
DA
DA
DA
4
4
4
N
1
-9.76
0.80
105.90
96.14
B
B
B
O4'
C1'
C2'
DT
DT
DT
7
7
7
N
1
3.88
0.60
118.00
121.88
B
B
B
C4
C5
C6
DT
DT
DT
7
7
7
N
1
-4.38
0.60
122.90
118.52
B
B
B
C6
C5
C7
DT
DT
DT
7
7
7
N
1
-10.44
0.80
105.90
95.46
B
B
B
O4'
C1'
C2'
DT
DT
DT
8
8
8
N
1
3.62
0.60
118.00
121.62
B
B
B
C4
C5
C6
DT
DT
DT
8
8
8
N
1
7.59
1.10
109.80
117.39
B
B
B
C5'
C4'
O4'
DT
DT
DT
9
9
9
N
1
-11.05
0.80
105.90
94.85
B
B
B
O4'
C1'
C2'
DT
DT
DT
9
9
9
N
1
-3.78
0.60
122.90
119.12
B
B
B
C6
C5
C7
DT
DT
DT
9
9
9
N
1
12.10
2.00
112.30
124.40
B
B
B
C4'
C3'
O3'
DC
DC
DC
10
10
10
N
1
-13.33
0.80
105.90
92.57
B
B
B
O4'
C1'
C2'
DC
DC
DC
10
10
10
N
1
3.19
0.30
108.30
111.49
B
B
B
O4'
C1'
N1
DC
DC
DC
10
10
10
N
1
-3.09
0.40
104.50
101.41
B
B
B
O4'
C4'
C3'
DG
DG
DG
11
11
11
N
5'-D(*CP*GP*AP*AP*AP*CP*TP*TP*TP*CP*G)-3'
Solution Structure of the undecamer CGAAAC*TTTCG
1
N
N
2
N
N
covale
1.614
B
DA
5
B
O3'
DA
5
1_555
B
D00
6
B
P
D00
6
1_555
covale
1.601
B
D00
6
B
O3'
D00
6
1_555
B
DT
7
B
P
DT
7
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N1
DG
2
1_555
B
DC
10
B
N3
DC
10
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N2
DG
2
1_555
B
DC
10
B
O2
DC
10
1_555
hydrog
WATSON-CRICK
A
DG
2
A
O6
DG
2
1_555
B
DC
10
B
N4
DC
10
1_555
hydrog
WATSON-CRICK
A
DA
3
A
N1
DA
3
1_555
B
DT
9
B
N3
DT
9
1_555
hydrog
WATSON-CRICK
A
DA
3
A
N6
DA
3
1_555
B
DT
9
B
O4
DT
9
1_555
hydrog
WATSON-CRICK
A
DA
4
A
N1
DA
4
1_555
B
DT
8
B
N3
DT
8
1_555
hydrog
WATSON-CRICK
A
DA
4
A
N6
DA
4
1_555
B
DT
8
B
O4
DT
8
1_555
hydrog
DA-DT PAIR
A
DA
4
A
N1
DA
4
1_555
B
DT
9
B
N3
DT
9
1_555
hydrog
DA-DT PAIR
A
DA
5
A
N6
DA
5
1_555
B
DT
8
B
O2
DT
8
1_555
hydrog
WATSON-CRICK
A
DT
8
A
N3
DT
8
1_555
B
DA
4
B
N1
DA
4
1_555
hydrog
WATSON-CRICK
A
DT
8
A
O4
DT
8
1_555
B
DA
4
B
N6
DA
4
1_555
hydrog
DT-DA PAIR
A
DT
8
A
O2
DT
8
1_555
B
DA
5
B
N6
DA
5
1_555
hydrog
WATSON-CRICK
A
DT
9
A
N3
DT
9
1_555
B
DA
3
B
N1
DA
3
1_555
hydrog
WATSON-CRICK
A
DT
9
A
O4
DT
9
1_555
B
DA
3
B
N6
DA
3
1_555
hydrog
DT-DA PAIR
A
DT
9
A
N3
DT
9
1_555
B
DA
4
B
N1
DA
4
1_555
hydrog
WATSON-CRICK
A
DC
10
A
N3
DC
10
1_555
B
DG
2
B
N1
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
10
A
N4
DC
10
1_555
B
DG
2
B
O6
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
10
A
O2
DC
10
1_555
B
DG
2
B
N2
DG
2
1_555
DNA
interstrand cross-link, alkylated DNA, modified cytosine, alkylated cytosine, DNA
1N4B
PDB
1
1N4B
1N4B
PDB
2
1N4B
1
11
1N4B
1
11
1N4B
A
1
1
11
1
11
1N4B
1
11
1N4B
B
2
1
11