data_1N5C # _entry.id 1N5C # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1N5C pdb_00001n5c 10.2210/pdb1n5c/pdb NDB BD0061 ? ? RCSB RCSB017537 ? ? WWPDB D_1000017537 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-06-03 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2012-01-18 5 'Structure model' 1 4 2024-02-14 6 'Structure model' 1 5 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' struct_conn 5 5 'Structure model' struct_site 6 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 5 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 6 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 7 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 8 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 9 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 10 5 'Structure model' '_struct_conn.ptnr1_symmetry' 11 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 12 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 13 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 14 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 15 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 16 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 17 5 'Structure model' '_struct_conn.ptnr2_symmetry' 18 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 19 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 20 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1N5C _pdbx_database_status.recvd_initial_deposition_date 2002-11-05 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Freisinger, E.' 1 'Fernandes, A.' 2 'Grollman, A.P.' 3 'Kisker, C.F.' 4 # _citation.id primary _citation.title ;Crystallographic Characterization of an Exocyclic DNA Adduct: 3,N4-etheno-2'-deoxycytidine in the Dodecamer 5'-CGCGAATT(ethenoC)GCG-3' ; _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 329 _citation.page_first 685 _citation.page_last 697 _citation.year 2003 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12787670 _citation.pdbx_database_id_DOI '10.1016/S0022-2836(03)00445-5' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Freisinger, E.' 1 ? primary 'Fernandes, A.' 2 ? primary 'Grollman, A.P.' 3 ? primary 'Kisker, C.F.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(EDC)P*GP*CP*G)-3'" 3687.414 1 ? ? ? ? 2 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 3 water nat water 18.015 73 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DC)(DG)(DA)(DA)(DT)(DT)(EDC)(DG)(DC)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CGCGAATTXGCG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SODIUM ION' NA 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 DC n 1 4 DG n 1 5 DA n 1 6 DA n 1 7 DT n 1 8 DT n 1 9 EDC n 1 10 DG n 1 11 DC n 1 12 DG n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 EDC 'DNA linking' . "N3,N4-ETHENO-2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" '6-(2-deoxy-5-O-phosphono-beta-D-erythro-pentofuranosyl)imidazo[1,2-c]pyrimidin-5(6H)-one' 'C11 H14 N3 O7 P' 331.219 HOH non-polymer . WATER ? 'H2 O' 18.015 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 13 13 DC C A . n A 1 2 DG 2 14 14 DG G A . n A 1 3 DC 3 15 15 DC C A . n A 1 4 DG 4 16 16 DG G A . n A 1 5 DA 5 17 17 DA A A . n A 1 6 DA 6 18 18 DA A A . n A 1 7 DT 7 19 19 DT T A . n A 1 8 DT 8 20 20 DT T A . n A 1 9 EDC 9 21 21 EDC E A . n A 1 10 DG 10 22 22 DG G A . n A 1 11 DC 11 23 23 DC C A . n A 1 12 DG 12 24 24 DG G A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA 1 1101 1101 NA NA A . C 3 HOH 1 1001 1001 HOH HOH A . C 3 HOH 2 1002 1001 HOH HOH A . C 3 HOH 3 1003 1001 HOH HOH A . C 3 HOH 4 1004 1001 HOH HOH A . C 3 HOH 5 1005 1001 HOH HOH A . C 3 HOH 6 1006 1001 HOH HOH A . C 3 HOH 7 1007 1001 HOH HOH A . C 3 HOH 8 1008 1001 HOH HOH A . C 3 HOH 9 1009 1001 HOH HOH A . C 3 HOH 10 1010 1001 HOH HOH A . C 3 HOH 11 1011 1001 HOH HOH A . C 3 HOH 12 1012 1001 HOH HOH A . C 3 HOH 13 1013 1001 HOH HOH A . C 3 HOH 14 1014 1001 HOH HOH A . C 3 HOH 15 1015 1001 HOH HOH A . C 3 HOH 16 1016 1001 HOH HOH A . C 3 HOH 17 1017 1001 HOH HOH A . C 3 HOH 18 1018 1001 HOH HOH A . C 3 HOH 19 1019 1001 HOH HOH A . C 3 HOH 20 1020 1001 HOH HOH A . C 3 HOH 21 1021 1001 HOH HOH A . C 3 HOH 22 1022 1001 HOH HOH A . C 3 HOH 23 1023 1001 HOH HOH A . C 3 HOH 24 1024 1001 HOH HOH A . C 3 HOH 25 1025 1001 HOH HOH A . C 3 HOH 26 1026 1001 HOH HOH A . C 3 HOH 27 1027 1001 HOH HOH A . C 3 HOH 28 1028 1001 HOH HOH A . C 3 HOH 29 1029 1001 HOH HOH A . C 3 HOH 30 1030 1001 HOH HOH A . C 3 HOH 31 1031 1001 HOH HOH A . C 3 HOH 32 1032 1001 HOH HOH A . C 3 HOH 33 1033 1001 HOH HOH A . C 3 HOH 34 1034 1001 HOH HOH A . C 3 HOH 35 1035 1001 HOH HOH A . C 3 HOH 36 1036 1001 HOH HOH A . C 3 HOH 37 1037 1001 HOH HOH A . C 3 HOH 38 1038 1001 HOH HOH A . C 3 HOH 39 1039 1001 HOH HOH A . C 3 HOH 40 1040 1001 HOH HOH A . C 3 HOH 41 1041 1001 HOH HOH A . C 3 HOH 42 1042 1001 HOH HOH A . C 3 HOH 43 1043 1001 HOH HOH A . C 3 HOH 44 1044 1001 HOH HOH A . C 3 HOH 45 1045 1001 HOH HOH A . C 3 HOH 46 1046 1001 HOH HOH A . C 3 HOH 47 1047 1001 HOH HOH A . C 3 HOH 48 1048 1001 HOH HOH A . C 3 HOH 49 1049 1001 HOH HOH A . C 3 HOH 50 1050 1001 HOH HOH A . C 3 HOH 51 1051 1001 HOH HOH A . C 3 HOH 52 1052 1001 HOH HOH A . C 3 HOH 53 1053 1001 HOH HOH A . C 3 HOH 54 1054 1001 HOH HOH A . C 3 HOH 55 1055 1001 HOH HOH A . C 3 HOH 56 1056 1001 HOH HOH A . C 3 HOH 57 1057 1001 HOH HOH A . C 3 HOH 58 1058 1001 HOH HOH A . C 3 HOH 59 1059 1001 HOH HOH A . C 3 HOH 60 1060 1001 HOH HOH A . C 3 HOH 61 1061 1001 HOH HOH A . C 3 HOH 62 1062 1001 HOH HOH A . C 3 HOH 63 1063 1001 HOH HOH A . C 3 HOH 64 1064 1001 HOH HOH A . C 3 HOH 65 1065 1001 HOH HOH A . C 3 HOH 66 1066 1001 HOH HOH A . C 3 HOH 67 1067 1001 HOH HOH A . C 3 HOH 68 1068 1001 HOH HOH A . C 3 HOH 69 1069 1001 HOH HOH A . C 3 HOH 70 1070 1001 HOH HOH A . C 3 HOH 71 1071 1001 HOH HOH A . C 3 HOH 72 1072 1001 HOH HOH A . C 3 HOH 73 1073 1001 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 X-PLOR 'model building' . ? 3 SHELXL-97 refinement . ? 4 X-PLOR phasing . ? 5 # _cell.entry_id 1N5C _cell.length_a 26.723 _cell.length_b 26.723 _cell.length_c 101.544 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1N5C _symmetry.space_group_name_H-M 'P 32 1 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 153 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1N5C _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.34 _exptl_crystal.density_percent_sol 47.11 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.00 _exptl_crystal_grow.pdbx_details ;Drop: MPD, potassium chloride, spermine tetrahydrochloride, cacodylate; Reservoir: MPD, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K, pH 7.00 ; _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 MPD ? ? ? 1 2 1 KCl ? ? ? 1 3 1 'spermine tetrahydrochloride' ? ? ? 1 4 1 cacodylate ? ? ? 1 5 2 MPD ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2000-06-13 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator MIRROR _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X26C' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X26C _diffrn_source.pdbx_wavelength 1.1 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1N5C _reflns.observed_criterion_sigma_I 5 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 1.790 _reflns.number_obs 4113 _reflns.number_all ? _reflns.percent_possible_obs 99.4 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.061 _reflns.pdbx_netI_over_sigmaI 22 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4 _reflns.R_free_details ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.d_res_high 1.79 _reflns_shell.d_res_low 1.85 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.187 _reflns_shell.meanI_over_sigI_obs 2 _reflns_shell.pdbx_redundancy 4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.entry_id 1N5C _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all 3913 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 1.79 _refine.ls_percent_reflns_obs 99.6 _refine.ls_R_factor_obs 0.161 _refine.ls_R_factor_all 0.164 _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free 0.219 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5 _refine.ls_number_reflns_R_free 200 _refine.ls_number_parameters 1327 _refine.ls_number_restraints 1445 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ;BABINET'S PRINCIPLE ; _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'NDB ENTRY BD0032' _refine.pdbx_method_to_determine_struct 'ISOMORPHOUS REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1N5C _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen 137 _refine_analyze.occupancy_sum_non_hydrogen 303.75 _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 245 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 73 _refine_hist.number_atoms_total 319 _refine_hist.d_res_high 1.79 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.020 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 2.600 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist ? ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.025 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol ? ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.007 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.065 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt ? ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.143 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps ? ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 1N5C _pdbx_refine.R_factor_all_no_cutoff 0.164 _pdbx_refine.R_factor_obs_no_cutoff 0.161 _pdbx_refine.free_R_factor_no_cutoff 0.219 _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 5 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 200 _pdbx_refine.R_factor_all_4sig_cutoff 0.152 _pdbx_refine.R_factor_obs_4sig_cutoff 0.149 _pdbx_refine.free_R_factor_4sig_cutoff 0.215 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 5 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 172 _pdbx_refine.number_reflns_obs_4sig_cutoff 3141 _pdbx_refine.number_reflns_obs_no_cutoff ? _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _database_PDB_matrix.entry_id 1N5C _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1N5C _struct.title 'Crystal Structure Analysis of the B-DNA Dodecamer CGCGAATT(ethenoC)GCG' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1N5C _struct_keywords.pdbx_keywords DNA _struct_keywords.text ;B form double helix, 3, N4-etheno-2'-cytidine modification opposite G, DNA ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1N5C _struct_ref.pdbx_db_accession 1N5C _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1N5C _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 12 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 1N5C _struct_ref_seq.db_align_beg 13 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 24 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 13 _struct_ref_seq.pdbx_auth_seq_align_end 24 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_655 -x+y+1,y,-z+2/3 -1.0000000000 0.0000000000 0.0000000000 26.7230000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 67.6960000000 # _struct_biol.id 1 _struct_biol.details ;The second part of the biological assembly/double helix is generated by the two fold axis: -x+y+1, y, -z+3/2. ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DT 8 "O3'" ? ? ? 1_555 A EDC 9 P ? ? A DT 20 A EDC 21 1_555 ? ? ? ? ? ? ? 1.620 ? ? covale2 covale both ? A EDC 9 "O3'" ? ? ? 1_555 A DG 10 P ? ? A EDC 21 A DG 22 1_555 ? ? ? ? ? ? ? 1.573 ? ? metalc1 metalc ? ? A DC 1 N3 ? ? ? 1_555 B NA . NA ? ? A DC 13 A NA 1101 1_555 ? ? ? ? ? ? ? 2.292 ? ? metalc2 metalc ? ? A DC 1 O2 ? ? ? 1_555 B NA . NA ? ? A DC 13 A NA 1101 1_555 ? ? ? ? ? ? ? 2.395 ? ? metalc3 metalc ? ? A DG 12 OP1 ? ? ? 5_755 B NA . NA ? ? A DG 24 A NA 1101 1_555 ? ? ? ? ? ? ? 2.279 ? ? hydrog1 hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DC 11 N3 ? ? A DG 14 A DC 23 5_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DC 11 O2 ? ? A DG 14 A DC 23 5_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 2 O6 ? ? ? 1_555 A DC 11 N4 ? ? A DG 14 A DC 23 5_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 3 N3 ? ? ? 1_555 A DG 10 N1 ? ? A DC 15 A DG 22 5_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 3 N4 ? ? ? 1_555 A DG 10 O6 ? ? A DC 15 A DG 22 5_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 3 O2 ? ? ? 1_555 A DG 10 N2 ? ? A DC 15 A DG 22 5_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 5 N1 ? ? ? 1_555 A DT 8 N3 ? ? A DA 17 A DT 20 5_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 5 N6 ? ? ? 1_555 A DT 8 O4 ? ? A DA 17 A DT 20 5_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 6 N1 ? ? ? 1_555 A DT 7 N3 ? ? A DA 18 A DT 19 5_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 6 N6 ? ? ? 1_555 A DT 7 O4 ? ? A DA 18 A DT 19 5_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 7 N3 ? ? ? 1_555 A DA 6 N1 ? ? A DT 19 A DA 18 5_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DT 7 O4 ? ? ? 1_555 A DA 6 N6 ? ? A DT 19 A DA 18 5_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 8 N3 ? ? ? 1_555 A DA 5 N1 ? ? A DT 20 A DA 17 5_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 8 O4 ? ? ? 1_555 A DA 5 N6 ? ? A DT 20 A DA 17 5_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 10 N1 ? ? ? 1_555 A DC 3 N3 ? ? A DG 22 A DC 15 5_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 10 N2 ? ? ? 1_555 A DC 3 O2 ? ? A DG 22 A DC 15 5_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 10 O6 ? ? ? 1_555 A DC 3 N4 ? ? A DG 22 A DC 15 5_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 11 N3 ? ? ? 1_555 A DG 2 N1 ? ? A DC 23 A DG 14 5_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 11 N4 ? ? ? 1_555 A DG 2 O6 ? ? A DC 23 A DG 14 5_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 11 O2 ? ? ? 1_555 A DG 2 N2 ? ? A DC 23 A DG 14 5_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 N3 ? A DC 1 ? A DC 13 ? 1_555 NA ? B NA . ? A NA 1101 ? 1_555 O2 ? A DC 1 ? A DC 13 ? 1_555 56.8 ? 2 N3 ? A DC 1 ? A DC 13 ? 1_555 NA ? B NA . ? A NA 1101 ? 1_555 OP1 ? A DG 12 ? A DG 24 ? 5_755 112.3 ? 3 O2 ? A DC 1 ? A DC 13 ? 1_555 NA ? B NA . ? A NA 1101 ? 1_555 OP1 ? A DG 12 ? A DG 24 ? 5_755 93.2 ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id NA _struct_site.pdbx_auth_seq_id 1101 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 3 _struct_site.details 'BINDING SITE FOR RESIDUE NA A 1101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 DC A 1 ? DC A 13 . ? 1_555 ? 2 AC1 3 DC A 11 ? DC A 23 . ? 5_755 ? 3 AC1 3 DG A 12 ? DG A 24 . ? 5_755 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C6 A DC 13 ? ? N1 A DC 13 ? ? C2 A DC 13 ? ? 117.64 120.30 -2.66 0.40 N 2 1 C2 A DC 13 ? ? N3 A DC 13 ? ? C4 A DC 13 ? ? 123.03 119.90 3.13 0.50 N 3 1 C5 A DC 13 ? ? C6 A DC 13 ? ? N1 A DC 13 ? ? 124.32 121.00 3.32 0.50 N 4 1 N1 A DC 13 ? ? C2 A DC 13 ? ? O2 A DC 13 ? ? 123.55 118.90 4.65 0.60 N 5 1 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 101.04 108.00 -6.96 0.70 N 6 1 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 102.12 108.00 -5.88 0.70 N 7 1 "C3'" A EDC 21 ? ? "O3'" A EDC 21 ? ? P A DG 22 ? ? 130.87 119.70 11.17 1.20 Y 8 1 N1 A DG 22 ? ? C6 A DG 22 ? ? O6 A DG 22 ? ? 124.83 119.90 4.93 0.60 N 9 1 C5 A DG 22 ? ? C6 A DG 22 ? ? O6 A DG 22 ? ? 123.52 128.60 -5.08 0.60 N # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A NA 1101 ? B NA . 2 1 A HOH 1002 ? C HOH . 3 1 A HOH 1042 ? C HOH . 4 1 A HOH 1050 ? C HOH . 5 1 A HOH 1056 ? C HOH . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 EDC OP3 O N N 144 EDC P P N N 145 EDC N1 N N N 146 EDC C2 C N N 147 EDC O2 O N N 148 EDC N3 N Y N 149 EDC C4 C Y N 150 EDC N4 N Y N 151 EDC C5 C N N 152 EDC C6 C N N 153 EDC C7 C Y N 154 EDC C8 C Y N 155 EDC "C1'" C N R 156 EDC "C2'" C N N 157 EDC "C3'" C N S 158 EDC "O3'" O N N 159 EDC "C4'" C N R 160 EDC "O4'" O N N 161 EDC "C5'" C N N 162 EDC "O5'" O N N 163 EDC OP1 O N N 164 EDC OP2 O N N 165 EDC HOP3 H N N 166 EDC H5 H N N 167 EDC H6 H N N 168 EDC H7 H N N 169 EDC H8 H N N 170 EDC "H1'" H N N 171 EDC "H2'" H N N 172 EDC "H2''" H N N 173 EDC "H3'" H N N 174 EDC "HO3'" H N N 175 EDC "H4'" H N N 176 EDC "H5'" H N N 177 EDC "H5''" H N N 178 EDC HOP2 H N N 179 HOH O O N N 180 HOH H1 H N N 181 HOH H2 H N N 182 NA NA NA N N 183 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 EDC P OP3 sing N N 150 EDC OP3 HOP3 sing N N 151 EDC OP1 P doub N N 152 EDC "O5'" P sing N N 153 EDC P OP2 sing N N 154 EDC C2 N1 sing N N 155 EDC N1 "C1'" sing N N 156 EDC N1 C6 sing N N 157 EDC O2 C2 doub N N 158 EDC N3 C2 sing N N 159 EDC C8 N3 sing Y N 160 EDC N3 C4 sing Y N 161 EDC N4 C4 doub Y N 162 EDC C4 C5 sing N N 163 EDC C7 N4 sing Y N 164 EDC C5 C6 doub N N 165 EDC C5 H5 sing N N 166 EDC C6 H6 sing N N 167 EDC C8 C7 doub Y N 168 EDC C7 H7 sing N N 169 EDC C8 H8 sing N N 170 EDC "C1'" "C2'" sing N N 171 EDC "C1'" "O4'" sing N N 172 EDC "C1'" "H1'" sing N N 173 EDC "C2'" "C3'" sing N N 174 EDC "C2'" "H2'" sing N N 175 EDC "C2'" "H2''" sing N N 176 EDC "O3'" "C3'" sing N N 177 EDC "C3'" "C4'" sing N N 178 EDC "C3'" "H3'" sing N N 179 EDC "O3'" "HO3'" sing N N 180 EDC "O4'" "C4'" sing N N 181 EDC "C4'" "C5'" sing N N 182 EDC "C4'" "H4'" sing N N 183 EDC "O5'" "C5'" sing N N 184 EDC "C5'" "H5'" sing N N 185 EDC "C5'" "H5''" sing N N 186 EDC OP2 HOP2 sing N N 187 HOH O H1 sing N N 188 HOH O H2 sing N N 189 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1N5C 'double helix' 1N5C 'b-form double helix' 1N5C 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 2 1_555 A DC 11 5_655 -0.224 0.013 0.112 -14.509 -2.925 -4.822 1 A_DG14:DC23_A A 14 ? A 23 ? 19 1 1 A DC 3 1_555 A DG 10 5_655 0.149 0.015 0.564 -12.906 6.485 1.258 2 A_DC15:DG22_A A 15 ? A 22 ? 19 1 1 A DA 5 1_555 A DT 8 5_655 -0.166 -0.153 -0.523 -0.075 -19.451 11.324 3 A_DA17:DT20_A A 17 ? A 20 ? 20 1 1 A DA 6 1_555 A DT 7 5_655 0.090 0.058 0.011 -3.036 -18.457 5.671 4 A_DA18:DT19_A A 18 ? A 19 ? 20 1 1 A DT 7 1_555 A DA 6 5_655 -0.090 0.058 0.011 3.036 -18.457 5.671 5 A_DT19:DA18_A A 19 ? A 18 ? 20 1 1 A DT 8 1_555 A DA 5 5_655 0.166 -0.153 -0.523 0.075 -19.451 11.324 6 A_DT20:DA17_A A 20 ? A 17 ? 20 1 1 A DG 10 1_555 A DC 3 5_655 -0.149 0.015 0.564 12.906 6.485 1.258 7 A_DG22:DC15_A A 22 ? A 15 ? 19 1 1 A DC 11 1_555 A DG 2 5_655 0.224 0.013 0.112 14.509 -2.925 -4.822 8 A_DC23:DG14_A A 23 ? A 14 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 2 1_555 A DC 11 5_655 A DC 3 1_555 A DG 10 5_655 0.918 0.264 3.510 -4.126 -5.741 35.100 1.298 -2.118 3.301 -9.402 6.756 35.783 1 AA_DG14DC15:DG22DC23_AA A 14 ? A 23 ? A 15 ? A 22 ? 1 A DC 3 1_555 A DG 10 5_655 A DA 5 1_555 A DT 8 5_655 -0.514 0.174 6.388 4.020 8.038 66.602 -0.454 0.771 6.334 7.286 -3.644 67.136 2 AA_DC15DA17:DT20DG22_AA A 15 ? A 22 ? A 17 ? A 20 ? 1 A DA 5 1_555 A DT 8 5_655 A DA 6 1_555 A DT 7 5_655 -0.119 -0.096 3.385 -4.757 -5.112 37.088 0.540 -0.455 3.357 -7.950 7.398 37.717 3 AA_DA17DA18:DT19DT20_AA A 17 ? A 20 ? A 18 ? A 19 ? 1 A DA 6 1_555 A DT 7 5_655 A DT 7 1_555 A DA 6 5_655 0.000 -0.512 3.045 0.000 -2.480 35.195 -0.500 0.000 3.073 -4.095 0.000 35.280 4 AA_DA18DT19:DA18DT19_AA A 18 ? A 19 ? A 19 ? A 18 ? 1 A DT 7 1_555 A DA 6 5_655 A DT 8 1_555 A DA 5 5_655 0.119 -0.096 3.385 4.757 -5.112 37.088 0.540 0.455 3.357 -7.950 -7.398 37.717 5 AA_DT19DT20:DA17DA18_AA A 19 ? A 18 ? A 20 ? A 17 ? 1 A DT 8 1_555 A DA 5 5_655 A DG 10 1_555 A DC 3 5_655 0.514 0.174 6.388 -4.020 8.038 66.602 -0.454 -0.771 6.334 7.286 3.644 67.136 6 AA_DT20DG22:DC15DA17_AA A 20 ? A 17 ? A 22 ? A 15 ? 1 A DG 10 1_555 A DC 3 5_655 A DC 11 1_555 A DG 2 5_655 -0.918 0.264 3.510 4.126 -5.741 35.100 1.298 2.118 3.301 -9.402 -6.756 35.783 7 AA_DG22DC23:DG14DC15_AA A 22 ? A 15 ? A 23 ? A 14 ? # _pdbx_initial_refinement_model.accession_code 1EHV _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.details 'NDB ENTRY BD0032' # _atom_sites.entry_id 1N5C _atom_sites.fract_transf_matrix[1][1] 0.037421 _atom_sites.fract_transf_matrix[1][2] 0.021605 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.043210 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009848 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DC A 1 1 ? 23.127 31.866 18.826 1.00 49.59 ? 13 DC A "O5'" 1 ATOM 2 C "C5'" . DC A 1 1 ? 22.458 30.594 18.865 1.00 51.58 ? 13 DC A "C5'" 1 ATOM 3 C "C4'" . DC A 1 1 ? 23.014 29.683 17.794 1.00 59.09 ? 13 DC A "C4'" 1 ATOM 4 O "O4'" . DC A 1 1 ? 24.448 29.580 17.925 1.00 55.34 ? 13 DC A "O4'" 1 ATOM 5 C "C3'" . DC A 1 1 ? 22.481 28.255 17.855 1.00 54.58 ? 13 DC A "C3'" 1 ATOM 6 O "O3'" . DC A 1 1 ? 22.000 27.861 16.564 1.00 54.81 ? 13 DC A "O3'" 1 ATOM 7 C "C2'" . DC A 1 1 ? 23.654 27.444 18.329 1.00 48.20 ? 13 DC A "C2'" 1 ATOM 8 C "C1'" . DC A 1 1 ? 24.874 28.221 17.839 1.00 41.99 ? 13 DC A "C1'" 1 ATOM 9 N N1 . DC A 1 1 ? 26.132 28.156 18.603 1.00 54.14 ? 13 DC A N1 1 ATOM 10 C C2 . DC A 1 1 ? 27.350 28.362 17.937 1.00 59.55 ? 13 DC A C2 1 ATOM 11 O O2 . DC A 1 1 ? 27.436 28.597 16.720 1.00 38.97 ? 13 DC A O2 1 ATOM 12 N N3 . DC A 1 1 ? 28.499 28.299 18.657 1.00 61.76 ? 13 DC A N3 1 ATOM 13 C C4 . DC A 1 1 ? 28.523 28.055 19.960 1.00 65.55 ? 13 DC A C4 1 ATOM 14 N N4 . DC A 1 1 ? 29.695 28.012 20.588 1.00 75.91 ? 13 DC A N4 1 ATOM 15 C C5 . DC A 1 1 ? 27.302 27.843 20.669 1.00 66.64 ? 13 DC A C5 1 ATOM 16 C C6 . DC A 1 1 ? 26.178 27.907 19.954 1.00 63.09 ? 13 DC A C6 1 ATOM 17 P P . DG A 1 2 ? 20.606 27.036 16.453 1.00 53.73 ? 14 DG A P 1 ATOM 18 O OP1 . DG A 1 2 ? 20.658 25.945 17.445 1.00 43.63 ? 14 DG A OP1 1 ATOM 19 O OP2 . DG A 1 2 ? 20.397 26.762 15.009 1.00 48.33 ? 14 DG A OP2 1 ATOM 20 O "O5'" . DG A 1 2 ? 19.531 28.104 16.906 1.00 48.55 ? 14 DG A "O5'" 1 ATOM 21 C "C5'" . DG A 1 2 ? 19.067 29.124 16.005 1.00 40.33 ? 14 DG A "C5'" 1 ATOM 22 C "C4'" . DG A 1 2 ? 18.012 29.920 16.727 1.00 34.24 ? 14 DG A "C4'" 1 ATOM 23 O "O4'" . DG A 1 2 ? 16.906 29.071 17.078 1.00 35.45 ? 14 DG A "O4'" 1 ATOM 24 C "C3'" . DG A 1 2 ? 18.511 30.531 18.034 1.00 30.85 ? 14 DG A "C3'" 1 ATOM 25 O "O3'" . DG A 1 2 ? 17.895 31.800 18.195 1.00 41.42 ? 14 DG A "O3'" 1 ATOM 26 C "C2'" . DG A 1 2 ? 18.146 29.455 19.042 1.00 31.36 ? 14 DG A "C2'" 1 ATOM 27 C "C1'" . DG A 1 2 ? 16.837 28.912 18.523 1.00 27.80 ? 14 DG A "C1'" 1 ATOM 28 N N9 . DG A 1 2 ? 16.508 27.490 18.633 1.00 28.75 ? 14 DG A N9 1 ATOM 29 C C8 . DG A 1 2 ? 17.347 26.403 18.644 1.00 36.39 ? 14 DG A C8 1 ATOM 30 N N7 . DG A 1 2 ? 16.736 25.262 18.756 1.00 34.38 ? 14 DG A N7 1 ATOM 31 C C5 . DG A 1 2 ? 15.393 25.603 18.824 1.00 36.43 ? 14 DG A C5 1 ATOM 32 C C6 . DG A 1 2 ? 14.259 24.755 18.950 1.00 45.94 ? 14 DG A C6 1 ATOM 33 O O6 . DG A 1 2 ? 14.186 23.513 19.032 1.00 40.03 ? 14 DG A O6 1 ATOM 34 N N1 . DG A 1 2 ? 13.092 25.508 18.981 1.00 38.02 ? 14 DG A N1 1 ATOM 35 C C2 . DG A 1 2 ? 13.012 26.873 18.903 1.00 35.50 ? 14 DG A C2 1 ATOM 36 N N2 . DG A 1 2 ? 11.766 27.390 18.953 1.00 30.72 ? 14 DG A N2 1 ATOM 37 N N3 . DG A 1 2 ? 14.068 27.664 18.784 1.00 41.28 ? 14 DG A N3 1 ATOM 38 C C4 . DG A 1 2 ? 15.230 26.967 18.750 1.00 39.11 ? 14 DG A C4 1 ATOM 39 P P . DC A 1 3 ? 18.172 32.818 19.401 1.00 48.95 ? 15 DC A P 1 ATOM 40 O OP1 . DC A 1 3 ? 17.955 34.190 18.886 1.00 48.15 ? 15 DC A OP1 1 ATOM 41 O OP2 . DC A 1 3 ? 19.431 32.435 20.055 1.00 49.48 ? 15 DC A OP2 1 ATOM 42 O "O5'" . DC A 1 3 ? 16.959 32.465 20.400 1.00 38.69 ? 15 DC A "O5'" 1 ATOM 43 C "C5'" . DC A 1 3 ? 15.632 32.806 20.004 1.00 38.86 ? 15 DC A "C5'" 1 ATOM 44 C "C4'" . DC A 1 3 ? 14.584 32.009 20.739 1.00 34.35 ? 15 DC A "C4'" 1 ATOM 45 O "O4'" . DC A 1 3 ? 14.731 30.582 20.628 1.00 36.19 ? 15 DC A "O4'" 1 ATOM 46 C "C3'" . DC A 1 3 ? 14.623 32.301 22.252 1.00 30.33 ? 15 DC A "C3'" 1 ATOM 47 O "O3'" . DC A 1 3 ? 13.656 33.315 22.512 1.00 43.98 ? 15 DC A "O3'" 1 ATOM 48 C "C2'" . DC A 1 3 ? 14.346 30.988 22.904 1.00 36.81 ? 15 DC A "C2'" 1 ATOM 49 C "C1'" . DC A 1 3 ? 14.107 29.994 21.781 1.00 34.25 ? 15 DC A "C1'" 1 ATOM 50 N N1 . DC A 1 3 ? 14.684 28.664 21.985 1.00 26.32 ? 15 DC A N1 1 ATOM 51 C C2 . DC A 1 3 ? 13.832 27.590 22.223 1.00 34.18 ? 15 DC A C2 1 ATOM 52 O O2 . DC A 1 3 ? 12.611 27.824 22.250 1.00 43.35 ? 15 DC A O2 1 ATOM 53 N N3 . DC A 1 3 ? 14.338 26.348 22.419 1.00 33.65 ? 15 DC A N3 1 ATOM 54 C C4 . DC A 1 3 ? 15.659 26.168 22.375 1.00 35.71 ? 15 DC A C4 1 ATOM 55 N N4 . DC A 1 3 ? 16.137 24.942 22.564 1.00 33.07 ? 15 DC A N4 1 ATOM 56 C C5 . DC A 1 3 ? 16.560 27.243 22.133 1.00 43.64 ? 15 DC A C5 1 ATOM 57 C C6 . DC A 1 3 ? 16.034 28.458 21.946 1.00 41.22 ? 15 DC A C6 1 ATOM 58 P P . DG A 1 4 ? 13.575 34.164 23.879 1.00 47.61 ? 16 DG A P 1 ATOM 59 O OP1 . DG A 1 4 ? 13.315 35.564 23.537 1.00 47.48 ? 16 DG A OP1 1 ATOM 60 O OP2 . DG A 1 4 ? 14.749 33.768 24.713 1.00 43.58 ? 16 DG A OP2 1 ATOM 61 O "O5'" . DG A 1 4 ? 12.278 33.513 24.560 1.00 41.27 ? 16 DG A "O5'" 1 ATOM 62 C "C5'" . DG A 1 4 ? 10.998 33.557 23.931 1.00 45.99 ? 16 DG A "C5'" 1 ATOM 63 C "C4'" . DG A 1 4 ? 10.084 32.459 24.419 1.00 43.30 ? 16 DG A "C4'" 1 ATOM 64 O "O4'" . DG A 1 4 ? 10.775 31.187 24.287 1.00 47.67 ? 16 DG A "O4'" 1 ATOM 65 C "C3'" . DG A 1 4 ? 9.649 32.546 25.878 1.00 40.05 ? 16 DG A "C3'" 1 ATOM 66 O "O3'" . DG A 1 4 ? 8.276 32.190 26.034 1.00 51.36 ? 16 DG A "O3'" 1 ATOM 67 C "C2'" . DG A 1 4 ? 10.546 31.576 26.584 1.00 36.71 ? 16 DG A "C2'" 1 ATOM 68 C "C1'" . DG A 1 4 ? 10.734 30.495 25.523 1.00 41.87 ? 16 DG A "C1'" 1 ATOM 69 N N9 . DG A 1 4 ? 11.972 29.711 25.649 1.00 47.62 ? 16 DG A N9 1 ATOM 70 C C8 . DG A 1 4 ? 13.260 30.111 25.922 1.00 36.92 ? 16 DG A C8 1 ATOM 71 N N7 . DG A 1 4 ? 14.101 29.117 25.954 1.00 37.01 ? 16 DG A N7 1 ATOM 72 C C5 . DG A 1 4 ? 13.342 27.986 25.690 1.00 30.22 ? 16 DG A C5 1 ATOM 73 C C6 . DG A 1 4 ? 13.682 26.620 25.591 1.00 28.68 ? 16 DG A C6 1 ATOM 74 O O6 . DG A 1 4 ? 14.771 26.037 25.714 1.00 37.87 ? 16 DG A O6 1 ATOM 75 N N1 . DG A 1 4 ? 12.562 25.858 25.307 1.00 36.32 ? 16 DG A N1 1 ATOM 76 C C2 . DG A 1 4 ? 11.281 26.308 25.134 1.00 43.40 ? 16 DG A C2 1 ATOM 77 N N2 . DG A 1 4 ? 10.333 25.401 24.863 1.00 39.24 ? 16 DG A N2 1 ATOM 78 N N3 . DG A 1 4 ? 10.946 27.587 25.223 1.00 42.04 ? 16 DG A N3 1 ATOM 79 C C4 . DG A 1 4 ? 12.028 28.338 25.501 1.00 37.04 ? 16 DG A C4 1 ATOM 80 P P . DA A 1 5 ? 7.578 32.181 27.489 1.00 51.92 ? 17 DA A P 1 ATOM 81 O OP1 . DA A 1 5 ? 6.451 33.150 27.426 1.00 46.35 ? 17 DA A OP1 1 ATOM 82 O OP2 . DA A 1 5 ? 8.662 32.392 28.488 1.00 61.11 ? 17 DA A OP2 1 ATOM 83 O "O5'" . DA A 1 5 ? 6.994 30.730 27.696 1.00 50.01 ? 17 DA A "O5'" 1 ATOM 84 C "C5'" . DA A 1 5 ? 7.035 29.714 26.695 1.00 52.02 ? 17 DA A "C5'" 1 ATOM 85 C "C4'" . DA A 1 5 ? 6.304 28.471 27.124 1.00 54.68 ? 17 DA A "C4'" 1 ATOM 86 O "O4'" . DA A 1 5 ? 7.247 27.368 27.188 1.00 45.68 ? 17 DA A "O4'" 1 ATOM 87 C "C3'" . DA A 1 5 ? 5.661 28.476 28.508 1.00 54.44 ? 17 DA A "C3'" 1 ATOM 88 O "O3'" . DA A 1 5 ? 4.566 27.561 28.558 1.00 52.55 ? 17 DA A "O3'" 1 ATOM 89 C "C2'" . DA A 1 5 ? 6.803 28.089 29.403 1.00 51.44 ? 17 DA A "C2'" 1 ATOM 90 C "C1'" . DA A 1 5 ? 7.607 27.121 28.547 1.00 48.52 ? 17 DA A "C1'" 1 ATOM 91 N N9 . DA A 1 5 ? 9.072 27.272 28.628 1.00 41.22 ? 17 DA A N9 1 ATOM 92 C C8 . DA A 1 5 ? 9.809 28.424 28.722 1.00 44.23 ? 17 DA A C8 1 ATOM 93 N N7 . DA A 1 5 ? 11.110 28.230 28.775 1.00 39.14 ? 17 DA A N7 1 ATOM 94 C C5 . DA A 1 5 ? 11.227 26.845 28.709 1.00 31.43 ? 17 DA A C5 1 ATOM 95 C C6 . DA A 1 5 ? 12.354 26.001 28.718 1.00 33.54 ? 17 DA A C6 1 ATOM 96 N N6 . DA A 1 5 ? 13.602 26.455 28.803 1.00 35.60 ? 17 DA A N6 1 ATOM 97 N N1 . DA A 1 5 ? 12.151 24.674 28.637 1.00 37.25 ? 17 DA A N1 1 ATOM 98 C C2 . DA A 1 5 ? 10.878 24.239 28.554 1.00 47.85 ? 17 DA A C2 1 ATOM 99 N N3 . DA A 1 5 ? 9.731 24.921 28.534 1.00 36.84 ? 17 DA A N3 1 ATOM 100 C C4 . DA A 1 5 ? 9.985 26.243 28.616 1.00 36.66 ? 17 DA A C4 1 ATOM 101 P P . DA A 1 6 ? 3.772 27.285 29.943 1.00 57.61 ? 18 DA A P 1 ATOM 102 O OP1 . DA A 1 6 ? 2.384 26.909 29.578 1.00 59.47 ? 18 DA A OP1 1 ATOM 103 O OP2 . DA A 1 6 ? 4.035 28.433 30.845 1.00 56.85 ? 18 DA A OP2 1 ATOM 104 O "O5'" . DA A 1 6 ? 4.491 25.998 30.544 1.00 56.16 ? 18 DA A "O5'" 1 ATOM 105 C "C5'" . DA A 1 6 ? 4.320 24.701 29.963 1.00 52.59 ? 18 DA A "C5'" 1 ATOM 106 C "C4'" . DA A 1 6 ? 5.283 23.712 30.574 1.00 42.11 ? 18 DA A "C4'" 1 ATOM 107 O "O4'" . DA A 1 6 ? 6.634 24.205 30.441 1.00 33.82 ? 18 DA A "O4'" 1 ATOM 108 C "C3'" . DA A 1 6 ? 5.051 23.437 32.068 1.00 40.90 ? 18 DA A "C3'" 1 ATOM 109 O "O3'" . DA A 1 6 ? 4.671 22.074 32.232 1.00 40.20 ? 18 DA A "O3'" 1 ATOM 110 C "C2'" . DA A 1 6 ? 6.351 23.770 32.739 1.00 36.49 ? 18 DA A "C2'" 1 ATOM 111 C "C1'" . DA A 1 6 ? 7.370 23.816 31.601 1.00 41.65 ? 18 DA A "C1'" 1 ATOM 112 N N9 . DA A 1 6 ? 8.469 24.758 31.832 1.00 39.92 ? 18 DA A N9 1 ATOM 113 C C8 . DA A 1 6 ? 8.403 26.118 31.994 1.00 35.50 ? 18 DA A C8 1 ATOM 114 N N7 . DA A 1 6 ? 9.581 26.673 32.186 1.00 42.92 ? 18 DA A N7 1 ATOM 115 C C5 . DA A 1 6 ? 10.483 25.620 32.147 1.00 40.30 ? 18 DA A C5 1 ATOM 116 C C6 . DA A 1 6 ? 11.884 25.535 32.281 1.00 38.76 ? 18 DA A C6 1 ATOM 117 N N6 . DA A 1 6 ? 12.691 26.575 32.494 1.00 37.87 ? 18 DA A N6 1 ATOM 118 N N1 . DA A 1 6 ? 12.468 24.327 32.190 1.00 44.71 ? 18 DA A N1 1 ATOM 119 C C2 . DA A 1 6 ? 11.690 23.258 31.976 1.00 45.95 ? 18 DA A C2 1 ATOM 120 N N3 . DA A 1 6 ? 10.368 23.222 31.835 1.00 40.00 ? 18 DA A N3 1 ATOM 121 C C4 . DA A 1 6 ? 9.810 24.433 31.929 1.00 32.17 ? 18 DA A C4 1 ATOM 122 P P . DT A 1 7 ? 4.300 21.364 33.626 1.00 47.05 ? 19 DT A P 1 ATOM 123 O OP1 . DT A 1 7 ? 3.472 20.183 33.290 1.00 37.71 ? 19 DT A OP1 1 ATOM 124 O OP2 . DT A 1 7 ? 3.849 22.402 34.578 1.00 48.61 ? 19 DT A OP2 1 ATOM 125 O "O5'" . DT A 1 7 ? 5.725 20.798 34.110 1.00 49.14 ? 19 DT A "O5'" 1 ATOM 126 C "C5'" . DT A 1 7 ? 6.317 19.788 33.277 1.00 59.03 ? 19 DT A "C5'" 1 ATOM 127 C "C4'" . DT A 1 7 ? 7.702 19.456 33.776 1.00 52.46 ? 19 DT A "C4'" 1 ATOM 128 O "O4'" . DT A 1 7 ? 8.508 20.649 33.750 1.00 37.48 ? 19 DT A "O4'" 1 ATOM 129 C "C3'" . DT A 1 7 ? 7.739 18.932 35.205 1.00 50.25 ? 19 DT A "C3'" 1 ATOM 130 O "O3'" . DT A 1 7 ? 8.283 17.609 35.228 1.00 43.37 ? 19 DT A "O3'" 1 ATOM 131 C "C2'" . DT A 1 7 ? 8.590 19.918 35.967 1.00 47.86 ? 19 DT A "C2'" 1 ATOM 132 C "C1'" . DT A 1 7 ? 9.391 20.594 34.874 1.00 32.61 ? 19 DT A "C1'" 1 ATOM 133 N N1 . DT A 1 7 ? 9.799 21.982 35.092 1.00 30.61 ? 19 DT A N1 1 ATOM 134 C C2 . DT A 1 7 ? 11.140 22.283 35.079 1.00 30.13 ? 19 DT A C2 1 ATOM 135 O O2 . DT A 1 7 ? 12.017 21.457 34.900 1.00 53.07 ? 19 DT A O2 1 ATOM 136 N N3 . DT A 1 7 ? 11.414 23.609 35.291 1.00 44.71 ? 19 DT A N3 1 ATOM 137 C C4 . DT A 1 7 ? 10.496 24.628 35.506 1.00 50.67 ? 19 DT A C4 1 ATOM 138 O O4 . DT A 1 7 ? 10.919 25.766 35.680 1.00 37.31 ? 19 DT A O4 1 ATOM 139 C C5 . DT A 1 7 ? 9.106 24.232 35.502 1.00 43.37 ? 19 DT A C5 1 ATOM 140 C C7 . DT A 1 7 ? 8.039 25.253 35.723 1.00 62.09 ? 19 DT A C7 1 ATOM 141 C C6 . DT A 1 7 ? 8.827 22.943 35.298 1.00 38.21 ? 19 DT A C6 1 ATOM 142 P P . DT A 1 8 ? 8.553 16.937 36.672 1.00 50.32 ? 20 DT A P 1 ATOM 143 O OP1 . DT A 1 8 ? 8.454 15.476 36.525 1.00 46.78 ? 20 DT A OP1 1 ATOM 144 O OP2 . DT A 1 8 ? 7.711 17.669 37.647 1.00 49.56 ? 20 DT A OP2 1 ATOM 145 O "O5'" . DT A 1 8 ? 10.082 17.321 36.917 1.00 45.33 ? 20 DT A "O5'" 1 ATOM 146 C "C5'" . DT A 1 8 ? 11.088 16.827 36.022 1.00 49.97 ? 20 DT A "C5'" 1 ATOM 147 C "C4'" . DT A 1 8 ? 12.447 17.340 36.435 1.00 42.91 ? 20 DT A "C4'" 1 ATOM 148 O "O4'" . DT A 1 8 ? 12.373 18.779 36.572 1.00 44.17 ? 20 DT A "O4'" 1 ATOM 149 C "C3'" . DT A 1 8 ? 12.944 16.778 37.757 1.00 41.19 ? 20 DT A "C3'" 1 ATOM 150 O "O3'" . DT A 1 8 ? 14.262 16.247 37.645 1.00 36.88 ? 20 DT A "O3'" 1 ATOM 151 C "C2'" . DT A 1 8 ? 12.901 17.959 38.711 1.00 49.99 ? 20 DT A "C2'" 1 ATOM 152 C "C1'" . DT A 1 8 ? 13.085 19.135 37.792 1.00 46.52 ? 20 DT A "C1'" 1 ATOM 153 N N1 . DT A 1 8 ? 12.493 20.432 38.126 1.00 34.55 ? 20 DT A N1 1 ATOM 154 C C2 . DT A 1 8 ? 13.316 21.531 38.088 1.00 29.77 ? 20 DT A C2 1 ATOM 155 O O2 . DT A 1 8 ? 14.492 21.453 37.800 1.00 41.88 ? 20 DT A O2 1 ATOM 156 N N3 . DT A 1 8 ? 12.685 22.692 38.407 1.00 33.78 ? 20 DT A N3 1 ATOM 157 C C4 . DT A 1 8 ? 11.365 22.909 38.750 1.00 38.13 ? 20 DT A C4 1 ATOM 158 O O4 . DT A 1 8 ? 11.009 24.061 39.002 1.00 30.37 ? 20 DT A O4 1 ATOM 159 C C5 . DT A 1 8 ? 10.562 21.713 38.767 1.00 42.85 ? 20 DT A C5 1 ATOM 160 C C7 . DT A 1 8 ? 9.108 21.786 39.122 1.00 35.84 ? 20 DT A C7 1 ATOM 161 C C6 . DT A 1 8 ? 11.162 20.554 38.452 1.00 41.29 ? 20 DT A C6 1 HETATM 162 P P . EDC A 1 9 ? 14.915 15.425 38.879 1.00 46.62 ? 21 EDC A P 1 HETATM 163 N N1 . EDC A 1 9 ? 14.313 20.382 41.628 1.00 37.38 ? 21 EDC A N1 1 HETATM 164 C C2 . EDC A 1 9 ? 13.787 21.634 41.677 1.00 38.09 ? 21 EDC A C2 1 HETATM 165 O O2 . EDC A 1 9 ? 14.374 22.693 41.498 1.00 29.83 ? 21 EDC A O2 1 HETATM 166 N N3 . EDC A 1 9 ? 12.446 21.645 42.042 1.00 41.12 ? 21 EDC A N3 1 HETATM 167 C C4 . EDC A 1 9 ? 11.697 20.565 42.458 1.00 38.90 ? 21 EDC A C4 1 HETATM 168 N N4 . EDC A 1 9 ? 10.464 20.944 42.749 1.00 48.93 ? 21 EDC A N4 1 HETATM 169 C C5 . EDC A 1 9 ? 12.298 19.281 42.360 1.00 35.31 ? 21 EDC A C5 1 HETATM 170 C C6 . EDC A 1 9 ? 13.567 19.248 41.958 1.00 31.67 ? 21 EDC A C6 1 HETATM 171 C C7 . EDC A 1 9 ? 10.474 22.315 42.607 1.00 47.77 ? 21 EDC A C7 1 HETATM 172 C C8 . EDC A 1 9 ? 11.670 22.775 42.204 1.00 49.24 ? 21 EDC A C8 1 HETATM 173 C "C1'" . EDC A 1 9 ? 15.725 20.258 41.209 1.00 40.57 ? 21 EDC A "C1'" 1 HETATM 174 C "C2'" . EDC A 1 9 ? 16.627 19.563 42.209 1.00 49.04 ? 21 EDC A "C2'" 1 HETATM 175 C "C3'" . EDC A 1 9 ? 17.131 18.334 41.508 1.00 52.67 ? 21 EDC A "C3'" 1 HETATM 176 O "O3'" . EDC A 1 9 ? 18.515 18.108 41.721 1.00 50.34 ? 21 EDC A "O3'" 1 HETATM 177 C "C4'" . EDC A 1 9 ? 16.878 18.611 40.023 1.00 46.17 ? 21 EDC A "C4'" 1 HETATM 178 O "O4'" . EDC A 1 9 ? 15.727 19.473 40.012 1.00 46.90 ? 21 EDC A "O4'" 1 HETATM 179 C "C5'" . EDC A 1 9 ? 16.659 17.366 39.203 1.00 43.15 ? 21 EDC A "C5'" 1 HETATM 180 O "O5'" . EDC A 1 9 ? 15.609 16.566 39.753 1.00 45.95 ? 21 EDC A "O5'" 1 HETATM 181 O OP1 . EDC A 1 9 ? 15.997 14.582 38.298 1.00 57.40 ? 21 EDC A OP1 1 HETATM 182 O OP2 . EDC A 1 9 ? 13.835 14.798 39.653 1.00 46.10 ? 21 EDC A OP2 1 ATOM 183 P P . DG A 1 10 ? 19.261 17.215 42.779 1.00 51.46 ? 22 DG A P 1 ATOM 184 O OP1 . DG A 1 10 ? 20.555 16.780 42.153 1.00 45.11 ? 22 DG A OP1 1 ATOM 185 O OP2 . DG A 1 10 ? 18.371 16.156 43.305 1.00 39.87 ? 22 DG A OP2 1 ATOM 186 O "O5'" . DG A 1 10 ? 19.628 18.175 44.004 1.00 50.49 ? 22 DG A "O5'" 1 ATOM 187 C "C5'" . DG A 1 10 ? 20.459 19.327 43.871 1.00 46.10 ? 22 DG A "C5'" 1 ATOM 188 C "C4'" . DG A 1 10 ? 20.176 20.331 44.955 1.00 42.25 ? 22 DG A "C4'" 1 ATOM 189 O "O4'" . DG A 1 10 ? 18.848 20.894 44.764 1.00 35.83 ? 22 DG A "O4'" 1 ATOM 190 C "C3'" . DG A 1 10 ? 20.182 19.778 46.377 1.00 38.57 ? 22 DG A "C3'" 1 ATOM 191 O "O3'" . DG A 1 10 ? 20.798 20.687 47.277 1.00 41.05 ? 22 DG A "O3'" 1 ATOM 192 C "C2'" . DG A 1 10 ? 18.723 19.592 46.692 1.00 31.98 ? 22 DG A "C2'" 1 ATOM 193 C "C1'" . DG A 1 10 ? 18.204 20.871 46.053 1.00 34.40 ? 22 DG A "C1'" 1 ATOM 194 N N9 . DG A 1 10 ? 16.767 20.952 45.828 1.00 35.03 ? 22 DG A N9 1 ATOM 195 C C8 . DG A 1 10 ? 15.879 19.915 45.641 1.00 40.89 ? 22 DG A C8 1 ATOM 196 N N7 . DG A 1 10 ? 14.652 20.329 45.463 1.00 44.92 ? 22 DG A N7 1 ATOM 197 C C5 . DG A 1 10 ? 14.751 21.715 45.537 1.00 33.75 ? 22 DG A C5 1 ATOM 198 C C6 . DG A 1 10 ? 13.745 22.703 45.418 1.00 34.48 ? 22 DG A C6 1 ATOM 199 O O6 . DG A 1 10 ? 12.553 22.443 45.217 1.00 37.39 ? 22 DG A O6 1 ATOM 200 N N1 . DG A 1 10 ? 14.268 23.990 45.556 1.00 33.11 ? 22 DG A N1 1 ATOM 201 C C2 . DG A 1 10 ? 15.588 24.282 45.779 1.00 25.89 ? 22 DG A C2 1 ATOM 202 N N2 . DG A 1 10 ? 15.948 25.561 45.890 1.00 30.13 ? 22 DG A N2 1 ATOM 203 N N3 . DG A 1 10 ? 16.545 23.367 45.893 1.00 38.09 ? 22 DG A N3 1 ATOM 204 C C4 . DG A 1 10 ? 16.038 22.121 45.760 1.00 32.21 ? 22 DG A C4 1 ATOM 205 P P . DC A 1 11 ? 22.161 20.422 48.069 1.00 38.40 ? 23 DC A P 1 ATOM 206 O OP1 . DC A 1 11 ? 23.255 20.177 47.109 1.00 38.03 ? 23 DC A OP1 1 ATOM 207 O OP2 . DC A 1 11 ? 21.911 19.389 49.112 1.00 39.38 ? 23 DC A OP2 1 ATOM 208 O "O5'" . DC A 1 11 ? 22.413 21.811 48.811 1.00 44.38 ? 23 DC A "O5'" 1 ATOM 209 C "C5'" . DC A 1 11 ? 22.667 23.033 48.129 1.00 46.90 ? 23 DC A "C5'" 1 ATOM 210 C "C4'" . DC A 1 11 ? 21.907 24.190 48.734 1.00 45.39 ? 23 DC A "C4'" 1 ATOM 211 O "O4'" . DC A 1 11 ? 20.489 24.017 48.429 1.00 35.87 ? 23 DC A "O4'" 1 ATOM 212 C "C3'" . DC A 1 11 ? 22.008 24.348 50.246 1.00 25.49 ? 23 DC A "C3'" 1 ATOM 213 O "O3'" . DC A 1 11 ? 22.232 25.719 50.588 1.00 34.15 ? 23 DC A "O3'" 1 ATOM 214 C "C2'" . DC A 1 11 ? 20.686 23.800 50.736 1.00 25.71 ? 23 DC A "C2'" 1 ATOM 215 C "C1'" . DC A 1 11 ? 19.754 24.267 49.616 1.00 42.50 ? 23 DC A "C1'" 1 ATOM 216 N N1 . DC A 1 11 ? 18.464 23.570 49.491 1.00 33.03 ? 23 DC A N1 1 ATOM 217 C C2 . DC A 1 11 ? 17.340 24.363 49.256 1.00 28.23 ? 23 DC A C2 1 ATOM 218 O O2 . DC A 1 11 ? 17.477 25.604 49.165 1.00 26.49 ? 23 DC A O2 1 ATOM 219 N N3 . DC A 1 11 ? 16.133 23.748 49.135 1.00 33.55 ? 23 DC A N3 1 ATOM 220 C C4 . DC A 1 11 ? 16.063 22.418 49.243 1.00 34.60 ? 23 DC A C4 1 ATOM 221 N N4 . DC A 1 11 ? 14.863 21.852 49.119 1.00 31.85 ? 23 DC A N4 1 ATOM 222 C C5 . DC A 1 11 ? 17.205 21.586 49.483 1.00 30.23 ? 23 DC A C5 1 ATOM 223 C C6 . DC A 1 11 ? 18.386 22.208 49.601 1.00 23.82 ? 23 DC A C6 1 ATOM 224 P P . DG A 1 12 ? 23.012 26.014 51.983 1.00 40.88 ? 24 DG A P 1 ATOM 225 O OP1 . DG A 1 12 ? 23.067 27.454 52.227 1.00 34.55 ? 24 DG A OP1 1 ATOM 226 O OP2 . DG A 1 12 ? 24.240 25.200 51.999 1.00 45.97 ? 24 DG A OP2 1 ATOM 227 O "O5'" . DG A 1 12 ? 21.973 25.400 53.050 1.00 43.98 ? 24 DG A "O5'" 1 ATOM 228 C "C5'" . DG A 1 12 ? 20.873 26.209 53.499 1.00 41.55 ? 24 DG A "C5'" 1 ATOM 229 C "C4'" . DG A 1 12 ? 20.243 25.619 54.740 1.00 26.43 ? 24 DG A "C4'" 1 ATOM 230 O "O4'" . DG A 1 12 ? 19.864 24.259 54.510 1.00 28.89 ? 24 DG A "O4'" 1 ATOM 231 C "C3'" . DG A 1 12 ? 21.161 25.547 55.962 1.00 32.03 ? 24 DG A "C3'" 1 ATOM 232 O "O3'" . DG A 1 12 ? 20.891 26.637 56.845 1.00 36.31 ? 24 DG A "O3'" 1 ATOM 233 C "C2'" . DG A 1 12 ? 20.859 24.230 56.598 1.00 36.14 ? 24 DG A "C2'" 1 ATOM 234 C "C1'" . DG A 1 12 ? 20.504 23.362 55.406 1.00 34.53 ? 24 DG A "C1'" 1 ATOM 235 N N9 . DG A 1 12 ? 21.660 22.745 54.746 1.00 32.91 ? 24 DG A N9 1 ATOM 236 C C8 . DG A 1 12 ? 22.999 22.950 54.967 1.00 38.12 ? 24 DG A C8 1 ATOM 237 N N7 . DG A 1 12 ? 23.757 22.228 54.193 1.00 38.86 ? 24 DG A N7 1 ATOM 238 C C5 . DG A 1 12 ? 22.874 21.501 53.413 1.00 36.82 ? 24 DG A C5 1 ATOM 239 C C6 . DG A 1 12 ? 23.108 20.546 52.389 1.00 43.60 ? 24 DG A C6 1 ATOM 240 O O6 . DG A 1 12 ? 24.172 20.117 51.931 1.00 49.70 ? 24 DG A O6 1 ATOM 241 N N1 . DG A 1 12 ? 21.917 20.059 51.865 1.00 40.32 ? 24 DG A N1 1 ATOM 242 C C2 . DG A 1 12 ? 20.660 20.427 52.259 1.00 40.49 ? 24 DG A C2 1 ATOM 243 N N2 . DG A 1 12 ? 19.659 19.821 51.608 1.00 41.72 ? 24 DG A N2 1 ATOM 244 N N3 . DG A 1 12 ? 20.424 21.321 53.217 1.00 44.03 ? 24 DG A N3 1 ATOM 245 C C4 . DG A 1 12 ? 21.575 21.806 53.739 1.00 33.16 ? 24 DG A C4 1 HETATM 246 NA NA . NA B 2 . ? 29.769 29.098 16.924 0.50 19.68 ? 1101 NA A NA 1 HETATM 247 O O . HOH C 3 . ? 16.682 20.731 36.869 1.00 32.81 ? 1001 HOH A O 1 HETATM 248 O O . HOH C 3 . ? 13.361 19.211 33.848 0.50 29.06 ? 1002 HOH A O 1 HETATM 249 O O . HOH C 3 . ? 5.194 23.855 26.166 1.00 51.02 ? 1003 HOH A O 1 HETATM 250 O O . HOH C 3 . ? 4.025 33.404 26.976 1.00 46.44 ? 1004 HOH A O 1 HETATM 251 O O . HOH C 3 . ? 10.342 15.992 32.067 1.00 50.72 ? 1005 HOH A O 1 HETATM 252 O O . HOH C 3 . ? 20.294 32.992 15.512 1.00 61.99 ? 1006 HOH A O 1 HETATM 253 O O . HOH C 3 . ? 18.950 22.850 40.111 1.00 38.24 ? 1007 HOH A O 1 HETATM 254 O O . HOH C 3 . ? 15.545 18.681 49.033 1.00 48.47 ? 1008 HOH A O 1 HETATM 255 O O . HOH C 3 . ? 12.300 18.481 45.394 1.00 57.06 ? 1009 HOH A O 1 HETATM 256 O O . HOH C 3 . ? 20.214 17.344 49.672 1.00 46.07 ? 1010 HOH A O 1 HETATM 257 O O . HOH C 3 . ? 11.406 18.300 32.634 1.00 45.67 ? 1011 HOH A O 1 HETATM 258 O O . HOH C 3 . ? 12.499 29.495 32.556 1.00 51.82 ? 1012 HOH A O 1 HETATM 259 O O . HOH C 3 . ? 12.314 30.214 29.618 1.00 65.32 ? 1013 HOH A O 1 HETATM 260 O O . HOH C 3 . ? 24.162 16.933 52.209 1.00 49.78 ? 1014 HOH A O 1 HETATM 261 O O . HOH C 3 . ? 19.498 21.603 16.854 1.00 59.63 ? 1015 HOH A O 1 HETATM 262 O O . HOH C 3 . ? 24.711 16.871 48.547 1.00 53.13 ? 1016 HOH A O 1 HETATM 263 O O . HOH C 3 . ? 5.749 20.153 40.780 0.50 43.32 ? 1017 HOH A O 1 HETATM 264 O O . HOH C 3 . ? 6.232 34.181 25.150 1.00 62.74 ? 1018 HOH A O 1 HETATM 265 O O . HOH C 3 . ? 21.092 27.219 9.357 0.50 46.13 ? 1019 HOH A O 1 HETATM 266 O O . HOH C 3 . ? 25.826 25.522 54.183 0.50 42.10 ? 1020 HOH A O 1 HETATM 267 O O . HOH C 3 . ? 3.776 21.691 27.408 1.00 57.75 ? 1021 HOH A O 1 HETATM 268 O O . HOH C 3 . ? 26.315 22.734 51.782 0.50 39.65 ? 1022 HOH A O 1 HETATM 269 O O . HOH C 3 . ? 19.212 20.886 37.980 1.00 44.41 ? 1023 HOH A O 1 HETATM 270 O O . HOH C 3 . ? 17.192 23.340 16.071 1.00 50.62 ? 1024 HOH A O 1 HETATM 271 O O . HOH C 3 . ? 5.734 22.466 36.476 1.00 52.50 ? 1025 HOH A O 1 HETATM 272 O O . HOH C 3 . ? 5.738 31.989 23.172 1.00 52.65 ? 1026 HOH A O 1 HETATM 273 O O . HOH C 3 . ? 10.125 28.424 36.644 1.00 59.09 ? 1027 HOH A O 1 HETATM 274 O O . HOH C 3 . ? 19.240 24.457 45.760 1.00 39.83 ? 1028 HOH A O 1 HETATM 275 O O . HOH C 3 . ? 17.323 26.638 25.572 1.00 49.10 ? 1029 HOH A O 1 HETATM 276 O O . HOH C 3 . ? 17.057 29.093 25.924 1.00 50.68 ? 1030 HOH A O 1 HETATM 277 O O . HOH C 3 . ? 7.918 29.663 35.508 1.00 52.06 ? 1031 HOH A O 1 HETATM 278 O O . HOH C 3 . ? 17.741 31.209 24.260 1.00 57.79 ? 1032 HOH A O 1 HETATM 279 O O . HOH C 3 . ? 31.064 17.233 39.737 1.00 47.14 ? 1033 HOH A O 1 HETATM 280 O O . HOH C 3 . ? 9.901 38.470 18.489 0.50 48.03 ? 1034 HOH A O 1 HETATM 281 O O . HOH C 3 . ? 19.309 31.113 22.536 1.00 47.22 ? 1035 HOH A O 1 HETATM 282 O O . HOH C 3 . ? 8.682 22.700 24.991 1.00 40.90 ? 1036 HOH A O 1 HETATM 283 O O . HOH C 3 . ? 10.855 20.557 45.895 1.00 51.08 ? 1037 HOH A O 1 HETATM 284 O O . HOH C 3 . ? 18.951 13.801 39.933 1.00 54.35 ? 1038 HOH A O 1 HETATM 285 O O . HOH C 3 . ? 26.433 31.838 18.965 1.00 58.56 ? 1039 HOH A O 1 HETATM 286 O O . HOH C 3 . ? 8.927 18.242 40.113 1.00 44.85 ? 1040 HOH A O 1 HETATM 287 O O . HOH C 3 . ? 7.165 24.313 24.349 0.50 42.23 ? 1041 HOH A O 1 HETATM 288 O O . HOH C 3 . ? 25.613 31.498 16.924 0.25 54.95 ? 1042 HOH A O 1 HETATM 289 O O . HOH C 3 . ? 6.382 16.285 30.725 0.50 52.44 ? 1043 HOH A O 1 HETATM 290 O O . HOH C 3 . ? 12.472 34.521 20.956 0.50 38.66 ? 1044 HOH A O 1 HETATM 291 O O . HOH C 3 . ? 7.530 25.807 24.670 0.50 25.51 ? 1045 HOH A O 1 HETATM 292 O O . HOH C 3 . ? 16.468 16.181 46.152 0.50 34.23 ? 1046 HOH A O 1 HETATM 293 O O . HOH C 3 . ? 2.333 31.924 20.974 0.50 40.63 ? 1047 HOH A O 1 HETATM 294 O O . HOH C 3 . ? -1.823 24.706 29.507 0.50 41.59 ? 1048 HOH A O 1 HETATM 295 O O . HOH C 3 . ? -3.241 25.837 28.104 1.00 59.60 ? 1049 HOH A O 1 HETATM 296 O O . HOH C 3 . ? 15.758 21.759 16.924 0.50 41.47 ? 1050 HOH A O 1 HETATM 297 O O . HOH C 3 . ? 8.120 30.931 32.015 0.50 38.12 ? 1051 HOH A O 1 HETATM 298 O O . HOH C 3 . ? 21.625 23.739 44.172 1.00 39.32 ? 1052 HOH A O 1 HETATM 299 O O . HOH C 3 . ? 18.872 24.590 24.450 1.00 70.02 ? 1053 HOH A O 1 HETATM 300 O O . HOH C 3 . ? 20.382 28.759 12.238 0.50 67.20 ? 1054 HOH A O 1 HETATM 301 O O . HOH C 3 . ? 18.845 10.760 36.705 1.00 57.55 ? 1055 HOH A O 1 HETATM 302 O O . HOH C 3 . ? 13.361 14.069 33.848 0.50 64.97 ? 1056 HOH A O 1 HETATM 303 O O . HOH C 3 . ? 17.897 30.982 28.006 1.00 75.19 ? 1057 HOH A O 1 HETATM 304 O O . HOH C 3 . ? 21.376 28.653 26.785 1.00 67.61 ? 1058 HOH A O 1 HETATM 305 O O . HOH C 3 . ? 2.785 25.420 26.640 0.50 49.57 ? 1059 HOH A O 1 HETATM 306 O O . HOH C 3 . ? 28.532 26.123 52.941 0.50 44.72 ? 1060 HOH A O 1 HETATM 307 O O . HOH C 3 . ? 8.369 14.696 33.463 1.00 62.08 ? 1061 HOH A O 1 HETATM 308 O O . HOH C 3 . ? 25.358 25.630 22.186 1.00 47.31 ? 1062 HOH A O 1 HETATM 309 O O . HOH C 3 . ? 20.991 12.370 34.516 0.50 78.82 ? 1063 HOH A O 1 HETATM 310 O O . HOH C 3 . ? 23.209 10.939 33.317 0.50 52.97 ? 1064 HOH A O 1 HETATM 311 O O . HOH C 3 . ? 12.312 6.626 3.118 0.50 49.22 ? 1065 HOH A O 1 HETATM 312 O O . HOH C 3 . ? 22.515 17.505 43.222 1.00 53.86 ? 1066 HOH A O 1 HETATM 313 O O . HOH C 3 . ? 23.854 18.366 45.828 0.50 56.50 ? 1067 HOH A O 1 HETATM 314 O O . HOH C 3 . ? 1.036 23.982 28.451 0.50 55.50 ? 1068 HOH A O 1 HETATM 315 O O . HOH C 3 . ? 5.694 33.850 29.428 0.50 84.41 ? 1069 HOH A O 1 HETATM 316 O O . HOH C 3 . ? 11.370 19.115 47.285 0.50 53.39 ? 1070 HOH A O 1 HETATM 317 O O . HOH C 3 . ? 26.055 19.481 48.800 1.00 58.65 ? 1071 HOH A O 1 HETATM 318 O O . HOH C 3 . ? 14.699 36.804 22.077 0.50 47.07 ? 1072 HOH A O 1 HETATM 319 O O . HOH C 3 . ? 20.809 26.483 19.727 0.50 56.85 ? 1073 HOH A O 1 # loop_ _atom_site_anisotrop.id _atom_site_anisotrop.type_symbol _atom_site_anisotrop.pdbx_label_atom_id _atom_site_anisotrop.pdbx_label_alt_id _atom_site_anisotrop.pdbx_label_comp_id _atom_site_anisotrop.pdbx_label_asym_id _atom_site_anisotrop.pdbx_label_seq_id _atom_site_anisotrop.pdbx_PDB_ins_code _atom_site_anisotrop.U[1][1] _atom_site_anisotrop.U[2][2] _atom_site_anisotrop.U[3][3] _atom_site_anisotrop.U[1][2] _atom_site_anisotrop.U[1][3] _atom_site_anisotrop.U[2][3] _atom_site_anisotrop.pdbx_auth_seq_id _atom_site_anisotrop.pdbx_auth_comp_id _atom_site_anisotrop.pdbx_auth_asym_id _atom_site_anisotrop.pdbx_auth_atom_id 17 P P . DG A 2 ? 0.5477 0.8107 0.6831 0.0053 0.0627 0.2163 14 DG A P 39 P P . DC A 3 ? 0.6596 0.6198 0.5806 -0.0408 0.0585 0.2259 15 DC A P 58 P P . DG A 4 ? 0.7138 0.5640 0.5313 0.0723 0.2462 0.0687 16 DG A P 80 P P . DA A 5 ? 0.6070 0.8059 0.5598 0.0420 0.2056 0.1585 17 DA A P 101 P P . DA A 6 ? 0.7419 0.8006 0.6463 0.0412 0.2228 0.2180 18 DA A P 122 P P . DT A 7 ? 0.7062 0.7014 0.3802 -0.0331 0.0740 0.2656 19 DT A P 142 P P . DT A 8 ? 0.7684 0.7073 0.4363 -0.0289 -0.0420 0.2625 20 DT A P 162 P P . EDC A 9 ? 0.6530 0.6724 0.4459 -0.0354 -0.1416 0.2022 21 EDC A P 183 P P . DG A 10 ? 0.6473 0.6885 0.6194 -0.0107 -0.0364 0.1904 22 DG A P 205 P P . DC A 11 ? 0.3634 0.6428 0.4527 0.0123 0.0349 0.1121 23 DC A P 224 P P . DG A 12 ? 0.5666 0.5840 0.4027 -0.0669 -0.0049 0.1148 24 DG A P #