0.015515
0.008958
0.000000
0.000000
0.017915
0.000000
0.000000
0.000000
0.005105
0.00000
0.00000
0.00000
Fioravanti, E.
Haouz, A.
Ursby, T.
Munier-Lehmann, H.
Delarue, M.
Bourgeois, D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
64.454
64.454
195.899
C2 H3 O2 -1
59.044
ACETATE ION
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
O7 P2 -4
173.943
DIPHOSPHATE
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C10 H15 N2 O8 P
322.208
THYMIDINE-5'-PHOSPHATE
non-polymer
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C10 H16 N2 O11 P2
402.188
THYMIDINE-5'-DIPHOSPHATE
non-polymer
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
C
N
2
N
O
N
3
N
O
N
4
N
C
N
5
N
H
N
6
N
H
N
7
N
H
N
8
N
N
N
9
S
C
N
10
N
C
N
11
N
O
N
12
N
C
N
13
N
O
N
14
N
H
N
15
N
H
N
16
N
H
N
17
N
H
N
18
N
H
N
19
N
H
N
20
N
H
N
21
N
N
N
22
S
C
N
23
N
C
N
24
N
O
N
25
N
C
N
26
N
C
N
27
N
C
N
28
N
N
N
29
N
C
N
30
N
N
N
31
N
N
N
32
N
O
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
N
N
49
S
C
N
50
N
C
N
51
N
O
N
52
N
C
N
53
N
C
N
54
N
O
N
55
N
N
N
56
N
O
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
N
N
66
S
C
N
67
N
C
N
68
N
O
N
69
N
C
N
70
N
C
N
71
N
O
N
72
N
O
N
73
N
O
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
N
N
82
R
C
N
83
N
C
N
84
N
O
N
85
N
C
N
86
N
S
N
87
N
O
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
P
N
96
N
O
N
97
N
O
N
98
N
O
N
99
N
O
N
100
N
P
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
N
N
105
S
C
N
106
N
C
N
107
N
O
N
108
N
C
N
109
N
C
N
110
N
C
N
111
N
O
N
112
N
N
N
113
N
O
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
N
N
125
S
C
N
126
N
C
N
127
N
O
N
128
N
C
N
129
N
C
N
130
N
C
N
131
N
O
N
132
N
O
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
N
N
144
N
C
N
145
N
C
N
146
N
O
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
N
N
154
S
C
N
155
N
C
N
156
N
O
N
157
N
C
Y
158
N
C
Y
159
N
N
Y
160
N
C
Y
161
N
C
Y
162
N
N
N
163
N
O
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
O
N
175
N
H
N
176
N
H
N
177
N
N
N
178
S
C
N
179
N
C
N
180
N
O
N
181
S
C
N
182
N
C
N
183
N
C
N
184
N
C
N
185
N
O
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
N
N
200
S
C
N
201
N
C
N
202
N
O
N
203
N
C
N
204
N
C
N
205
N
C
N
206
N
C
N
207
N
O
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
N
N
222
S
C
N
223
N
C
N
224
N
O
N
225
N
C
N
226
N
C
N
227
N
C
N
228
N
C
N
229
N
N
N
230
N
O
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
N
N
247
S
C
N
248
N
C
N
249
N
O
N
250
N
C
N
251
N
C
N
252
N
S
N
253
N
C
N
254
N
O
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
MG
N
267
N
N
N
268
S
C
N
269
N
C
N
270
N
O
N
271
N
C
Y
272
N
C
Y
273
N
C
Y
274
N
C
Y
275
N
C
Y
276
N
C
Y
277
N
C
N
278
N
O
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
C
N
296
N
C
N
297
N
O
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
N
N
308
S
C
N
309
N
C
N
310
N
O
N
311
N
C
N
312
N
O
N
313
N
O
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
R
C
N
326
N
O
N
327
N
C
N
328
N
O
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
P
N
339
N
O
N
340
N
O
N
341
N
O
N
342
N
O
N
343
N
C
N
344
R
C
N
345
N
O
N
346
S
C
N
347
N
O
N
348
N
C
N
349
R
C
N
350
N
N
N
351
N
C
N
352
N
O
N
353
N
N
N
354
N
C
N
355
N
O
N
356
N
C
N
357
N
C
N
358
N
C
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
N
N
375
S
C
N
376
N
C
N
377
N
O
N
378
N
C
Y
379
N
C
Y
380
N
C
Y
381
N
C
Y
382
N
N
Y
383
N
C
Y
384
N
C
Y
385
N
C
Y
386
N
C
Y
387
N
C
N
388
N
O
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
S
P
N
402
N
O
N
403
N
O
N
404
N
O
N
405
N
P
N
406
N
O
N
407
N
O
N
408
N
O
N
409
N
O
N
410
N
C
N
411
R
C
N
412
N
O
N
413
S
C
N
414
N
O
N
415
N
C
N
416
R
C
Y
417
N
N
Y
418
N
C
N
419
N
O
Y
420
N
N
Y
421
N
C
N
422
N
O
Y
423
N
C
N
424
N
C
Y
425
N
C
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
N
N
443
S
C
N
444
N
C
N
445
N
O
N
446
N
C
Y
447
N
C
Y
448
N
C
Y
449
N
C
Y
450
N
C
Y
451
N
C
Y
452
N
C
N
453
N
O
N
454
N
O
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
N
N
467
S
C
N
468
N
C
N
469
N
O
N
470
N
C
N
471
N
C
N
472
N
C
N
473
N
O
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
doub
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
doub
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
doub
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
doub
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
doub
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
doub
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
doub
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
doub
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
doub
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
doub
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
doub
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
doub
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
doub
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
Y
154
N
sing
Y
155
N
doub
Y
156
N
doub
N
157
N
sing
Y
158
N
sing
N
159
N
sing
Y
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
doub
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
doub
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
doub
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
doub
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
doub
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
Y
262
N
doub
Y
263
N
sing
Y
264
N
sing
N
265
N
sing
Y
266
N
doub
N
267
N
sing
Y
268
N
doub
N
269
N
sing
Y
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
doub
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
doub
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
doub
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
doub
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
doub
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
doub
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
doub
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
Y
368
N
doub
Y
369
N
sing
Y
370
N
sing
N
371
N
sing
Y
372
N
doub
Y
373
N
sing
Y
374
N
sing
N
375
N
sing
Y
376
N
sing
Y
377
N
doub
N
378
N
sing
Y
379
N
doub
N
380
N
sing
Y
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
doub
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
doub
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
Y
413
N
sing
Y
414
N
sing
N
415
N
doub
Y
416
N
sing
Y
417
N
sing
N
418
N
sing
N
419
N
doub
Y
420
N
sing
N
421
N
sing
Y
422
N
doub
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
doub
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
Y
438
N
doub
Y
439
N
sing
Y
440
N
sing
N
441
N
sing
Y
442
N
doub
N
443
N
sing
Y
444
N
doub
N
445
N
sing
Y
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
doub
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
375
1077
1092
10.1016/S0022-2836(03)00202-X
12662932
Mycobacterium tuberculosis Thymidylate Kinase: Structural Studies of Intermediates along the
Reaction Pathway
2003
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
58
607
614
10.1107/S0907444902002135
Cryo-Photolysis of Caged Compounds: A Technique for Trapping Intermediate States in Protein
Crystals
2002
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
311
87
100
10.1006/jmbi.2001.4843
X-Ray Structure of Tmp Kinase from Mycobacterium Tuberculosis Complexed with Tmp at 1.95
A Resolution
2001
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
56
226
228
10.1107/S0907444999016212
Crystallization and Preliminary X-Ray Analysis of the Thymidylate Kinase from Mycobacterium
Tuberculosis
2000
10.2210/pdb1n5l/pdb
pdb_00001n5l
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2001-04-07
ADSC QUANTUM 4
silicon
SINGLE WAVELENGTH
M
x-ray
1
0.936
1.0
ID29
ESRF
0.936
SYNCHROTRON
ESRF BEAMLINE ID29
22662.525
THYMIDYLATE KINASE
2.7.4.9
2
man
polymer
59.044
ACETATE ION
2
syn
non-polymer
322.208
THYMIDINE-5'-PHOSPHATE
1
syn
non-polymer
24.305
MAGNESIUM ION
1
syn
non-polymer
402.188
THYMIDINE-5'-DIPHOSPHATE
1
syn
non-polymer
173.943
DIPHOSPHATE
1
syn
non-polymer
18.015
water
205
nat
water
no
no
MLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLASSVYAMATLFALDRAGAVHT
IQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGR
ARDNYERDAELQQRTGAVYAELAAQGWGGRWLVVGADVDPGRLAATLAPPDVPS
MLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLASSVYAMATLFALDRAGAVHT
IQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGR
ARDNYERDAELQQRTGAVYAELAAQGWGGRWLVVGADVDPGRLAATLAPPDVPS
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Mycobacterium
Escherichia
sample
1773
Mycobacterium tuberculosis
562
Escherichia coli
Plasmid
PET22B
1
2.64
53.12
VAPOR DIFFUSION, HANGING DROP, STREAK SEEDING, SOAKING
6.0
1.4 M sodium malonate, 2% PEG 2000, 0.1 M MES pH 6.0, 2 mM b-mercaptoethanol, 25 mM magnesium acetate, soaking in 30
mM ATP, VAPOR DIFFUSION, HANGING DROP, STREAK SEEDING, SOAKING
293.0
exptl_crystal_grow
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_site
repository
Initial release
Version format compliance
Version format compliance
Experimental preparation
Data collection
Database references
Derived calculations
Refinement description
1
0
2003-04-15
1
1
2007-10-16
1
2
2011-07-13
1
3
2018-01-31
1
4
2024-02-14
_exptl_crystal_grow.pdbx_details
_exptl_crystal_grow.temp
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS THYMIDYLATE KINASE CRYSTALLIZED IN SODIUM
MALONATE (2.1 A RESOLUTION)
CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS THYMIDYLATE KINASE COMPLEXED WITH
THYMIDINE-5'-DIPHOSPHATE (TDP)
CRYSTAL STRUCTURE OF INACTIVE MYCOBACTERIUM TUBERCULOSIS THYMIDYLATE KINASE COMPLEXED WITH THYMIDINE MONOPHOSPHATE (TMP) AT PH 4.6 (RESOLUTION 1.85 A)
CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS THYMIDYLATE KINASE COMPLEXED WITH THYMIDINE DIPHOSPHATE
(TDP) AND THYMIDINE TRIPHOSPHATE (TTP) AT PH 5.4 (RESOLUTION 1.85 A)
HETEROGEN
HOH molecules 140 and 141 were both named 140 in the paper because they occupy the
same site in the 2 monomers (A and B), in order to make an easier comparison of the
active sites.
RCSB
Y
RCSB
2002-11-06
REL
REL
ACT
ACETATE ION
TMP
THYMIDINE-5'-PHOSPHATE
MG
MAGNESIUM ION
TYD
THYMIDINE-5'-DIPHOSPHATE
DPO
DIPHOSPHATE
HOH
water
1N5K
PDB ENTRY 1N5K
PDB
experimental model
ACT
212
2
ACT
ACT
412
A
ACT
213
2
ACT
ACT
413
A
TMP
209
3
TMP
TMP
409
A
MG
210
4
MG
MG
215
B
TYD
211
5
TYD
TYD
216
B
DPO
214
6
DPO
DPO
414
B
TIP
1
7
HOH
HOH
414
A
TIP
2
7
HOH
HOH
415
A
TIP
3
7
HOH
HOH
416
A
TIP
5
7
HOH
HOH
417
A
TIP
6
7
HOH
HOH
418
A
TIP
12
7
HOH
HOH
419
A
TIP
13
7
HOH
HOH
420
A
TIP
14
7
HOH
HOH
421
A
TIP
15
7
HOH
HOH
422
A
TIP
17
7
HOH
HOH
423
A
TIP
20
7
HOH
HOH
424
A
TIP
22
7
HOH
HOH
425
A
TIP
23
7
HOH
HOH
426
A
TIP
24
7
HOH
HOH
427
A
TIP
25
7
HOH
HOH
428
A
TIP
30
7
HOH
HOH
429
A
TIP
31
7
HOH
HOH
430
A
TIP
32
7
HOH
HOH
431
A
TIP
33
7
HOH
HOH
432
A
TIP
34
7
HOH
HOH
433
A
TIP
35
7
HOH
HOH
434
A
TIP
37
7
HOH
HOH
435
A
TIP
38
7
HOH
HOH
436
A
TIP
39
7
HOH
HOH
437
A
TIP
41
7
HOH
HOH
438
A
TIP
42
7
HOH
HOH
439
A
TIP
43
7
HOH
HOH
440
A
TIP
47
7
HOH
HOH
441
A
TIP
48
7
HOH
HOH
442
A
TIP
50
7
HOH
HOH
443
A
TIP
51
7
HOH
HOH
444
A
TIP
53
7
HOH
HOH
445
A
TIP
55
7
HOH
HOH
446
A
TIP
59
7
HOH
HOH
447
A
TIP
60
7
HOH
HOH
448
A
TIP
61
7
HOH
HOH
449
A
TIP
64
7
HOH
HOH
450
A
TIP
65
7
HOH
HOH
451
A
TIP
66
7
HOH
HOH
452
A
TIP
67
7
HOH
HOH
453
A
TIP
69
7
HOH
HOH
454
A
TIP
71
7
HOH
HOH
455
A
TIP
72
7
HOH
HOH
456
A
TIP
77
7
HOH
HOH
457
A
TIP
79
7
HOH
HOH
458
A
TIP
80
7
HOH
HOH
459
A
TIP
82
7
HOH
HOH
460
A
TIP
83
7
HOH
HOH
461
A
TIP
85
7
HOH
HOH
462
A
TIP
89
7
HOH
HOH
463
A
TIP
94
7
HOH
HOH
464
A
TIP
96
7
HOH
HOH
465
A
TIP
97
7
HOH
HOH
466
A
TIP
98
7
HOH
HOH
467
A
TIP
99
7
HOH
HOH
468
A
TIP
103
7
HOH
HOH
469
A
TIP
104
7
HOH
HOH
470
A
TIP
105
7
HOH
HOH
471
A
TIP
106
7
HOH
HOH
472
A
TIP
107
7
HOH
HOH
473
A
TIP
109
7
HOH
HOH
474
A
TIP
110
7
HOH
HOH
475
A
TIP
111
7
HOH
HOH
476
A
TIP
114
7
HOH
HOH
477
A
TIP
116
7
HOH
HOH
478
A
TIP
117
7
HOH
HOH
479
A
TIP
118
7
HOH
HOH
480
A
TIP
119
7
HOH
HOH
481
A
TIP
121
7
HOH
HOH
482
A
TIP
122
7
HOH
HOH
483
A
TIP
125
7
HOH
HOH
484
A
TIP
128
7
HOH
HOH
485
A
TIP
131
7
HOH
HOH
486
A
TIP
132
7
HOH
HOH
487
A
TIP
133
7
HOH
HOH
488
A
TIP
134
7
HOH
HOH
489
A
TIP
136
7
HOH
HOH
490
A
TIP
137
7
HOH
HOH
491
A
TIP
140
7
HOH
HOH
492
A
TIP
142
7
HOH
HOH
493
A
TIP
144
7
HOH
HOH
494
A
TIP
145
7
HOH
HOH
495
A
TIP
147
7
HOH
HOH
496
A
TIP
149
7
HOH
HOH
497
A
TIP
150
7
HOH
HOH
498
A
TIP
151
7
HOH
HOH
499
A
TIP
156
7
HOH
HOH
500
A
TIP
158
7
HOH
HOH
501
A
TIP
159
7
HOH
HOH
502
A
TIP
161
7
HOH
HOH
503
A
TIP
163
7
HOH
HOH
504
A
TIP
166
7
HOH
HOH
505
A
TIP
174
7
HOH
HOH
506
A
TIP
178
7
HOH
HOH
507
A
TIP
179
7
HOH
HOH
508
A
TIP
181
7
HOH
HOH
509
A
TIP
189
7
HOH
HOH
510
A
TIP
195
7
HOH
HOH
511
A
TIP
196
7
HOH
HOH
512
A
TIP
198
7
HOH
HOH
513
A
TIP
299
7
HOH
HOH
514
A
TIP
200
7
HOH
HOH
515
A
TIP
201
7
HOH
HOH
516
A
TIP
205
7
HOH
HOH
517
A
TIP
209
7
HOH
HOH
518
A
TIP
210
7
HOH
HOH
519
A
TIP
213
7
HOH
HOH
520
A
TIP
215
7
HOH
HOH
521
A
TIP
216
7
HOH
HOH
522
A
TIP
222
7
HOH
HOH
523
A
TIP
225
7
HOH
HOH
524
A
TIP
226
7
HOH
HOH
525
A
TIP
230
7
HOH
HOH
526
A
TIP
231
7
HOH
HOH
527
A
TIP
232
7
HOH
HOH
528
A
TIP
235
7
HOH
HOH
529
A
TIP
236
7
HOH
HOH
530
A
TIP
4
7
HOH
HOH
415
B
TIP
7
7
HOH
HOH
416
B
TIP
8
7
HOH
HOH
417
B
TIP
9
7
HOH
HOH
418
B
TIP
10
7
HOH
HOH
419
B
TIP
11
7
HOH
HOH
420
B
TIP
16
7
HOH
HOH
421
B
TIP
18
7
HOH
HOH
422
B
TIP
19
7
HOH
HOH
423
B
TIP
21
7
HOH
HOH
424
B
TIP
26
7
HOH
HOH
425
B
TIP
27
7
HOH
HOH
426
B
TIP
28
7
HOH
HOH
427
B
TIP
29
7
HOH
HOH
428
B
TIP
36
7
HOH
HOH
429
B
TIP
40
7
HOH
HOH
430
B
TIP
44
7
HOH
HOH
431
B
TIP
45
7
HOH
HOH
432
B
TIP
46
7
HOH
HOH
433
B
TIP
49
7
HOH
HOH
434
B
TIP
54
7
HOH
HOH
435
B
TIP
56
7
HOH
HOH
436
B
TIP
57
7
HOH
HOH
437
B
TIP
58
7
HOH
HOH
438
B
TIP
62
7
HOH
HOH
439
B
TIP
63
7
HOH
HOH
440
B
TIP
68
7
HOH
HOH
441
B
TIP
70
7
HOH
HOH
442
B
TIP
74
7
HOH
HOH
443
B
TIP
75
7
HOH
HOH
444
B
TIP
76
7
HOH
HOH
445
B
TIP
78
7
HOH
HOH
446
B
TIP
81
7
HOH
HOH
447
B
TIP
84
7
HOH
HOH
448
B
TIP
86
7
HOH
HOH
449
B
TIP
87
7
HOH
HOH
450
B
TIP
88
7
HOH
HOH
451
B
TIP
92
7
HOH
HOH
452
B
TIP
93
7
HOH
HOH
453
B
TIP
100
7
HOH
HOH
454
B
TIP
101
7
HOH
HOH
455
B
TIP
102
7
HOH
HOH
456
B
TIP
108
7
HOH
HOH
457
B
TIP
112
7
HOH
HOH
458
B
TIP
113
7
HOH
HOH
459
B
TIP
115
7
HOH
HOH
460
B
TIP
120
7
HOH
HOH
461
B
TIP
123
7
HOH
HOH
462
B
TIP
126
7
HOH
HOH
463
B
TIP
127
7
HOH
HOH
464
B
TIP
129
7
HOH
HOH
465
B
TIP
135
7
HOH
HOH
466
B
TIP
138
7
HOH
HOH
467
B
TIP
139
7
HOH
HOH
468
B
TIP
140
7
HOH
HOH
469
B
TIP
148
7
HOH
HOH
470
B
TIP
152
7
HOH
HOH
471
B
TIP
154
7
HOH
HOH
472
B
TIP
155
7
HOH
HOH
473
B
TIP
157
7
HOH
HOH
474
B
TIP
164
7
HOH
HOH
475
B
TIP
167
7
HOH
HOH
476
B
TIP
168
7
HOH
HOH
477
B
TIP
171
7
HOH
HOH
478
B
TIP
172
7
HOH
HOH
479
B
TIP
175
7
HOH
HOH
480
B
TIP
177
7
HOH
HOH
481
B
TIP
180
7
HOH
HOH
482
B
TIP
182
7
HOH
HOH
483
B
TIP
187
7
HOH
HOH
484
B
TIP
188
7
HOH
HOH
485
B
TIP
190
7
HOH
HOH
486
B
TIP
191
7
HOH
HOH
487
B
TIP
192
7
HOH
HOH
488
B
TIP
193
7
HOH
HOH
489
B
TIP
194
7
HOH
HOH
490
B
TIP
197
7
HOH
HOH
491
B
TIP
203
7
HOH
HOH
492
B
TIP
204
7
HOH
HOH
493
B
TIP
207
7
HOH
HOH
494
B
TIP
208
7
HOH
HOH
495
B
TIP
214
7
HOH
HOH
496
B
TIP
217
7
HOH
HOH
497
B
TIP
218
7
HOH
HOH
498
B
TIP
223
7
HOH
HOH
499
B
TIP
228
7
HOH
HOH
500
B
TIP
233
7
HOH
HOH
501
B
TIP
237
7
HOH
HOH
502
B
MET
1
n
1
MET
1
A
LEU
2
n
2
LEU
2
A
ILE
3
n
3
ILE
3
A
ALA
4
n
4
ALA
4
A
ILE
5
n
5
ILE
5
A
GLU
6
n
6
GLU
6
A
GLY
7
n
7
GLY
7
A
VAL
8
n
8
VAL
8
A
ASP
9
n
9
ASP
9
A
GLY
10
n
10
GLY
10
A
ALA
11
n
11
ALA
11
A
GLY
12
n
12
GLY
12
A
LYS
13
n
13
LYS
13
A
ARG
14
n
14
ARG
14
A
THR
15
n
15
THR
15
A
LEU
16
n
16
LEU
16
A
VAL
17
n
17
VAL
17
A
GLU
18
n
18
GLU
18
A
LYS
19
n
19
LYS
19
A
LEU
20
n
20
LEU
20
A
SER
21
n
21
SER
21
A
GLY
22
n
22
GLY
22
A
ALA
23
n
23
ALA
23
A
PHE
24
n
24
PHE
24
A
ARG
25
n
25
ARG
25
A
ALA
26
n
26
ALA
26
A
ALA
27
n
27
ALA
27
A
GLY
28
n
28
GLY
28
A
ARG
29
n
29
ARG
29
A
SER
30
n
30
SER
30
A
VAL
31
n
31
VAL
31
A
ALA
32
n
32
ALA
32
A
THR
33
n
33
THR
33
A
LEU
34
n
34
LEU
34
A
ALA
35
n
35
ALA
35
A
PHE
36
n
36
PHE
36
A
PRO
37
n
37
PRO
37
A
ARG
38
n
38
ARG
38
A
TYR
39
n
39
TYR
39
A
GLY
40
n
40
GLY
40
A
GLN
41
n
41
GLN
41
A
SER
42
n
42
SER
42
A
VAL
43
n
43
VAL
43
A
ALA
44
n
44
ALA
44
A
ALA
45
n
45
ALA
45
A
ASP
46
n
46
ASP
46
A
ILE
47
n
47
ILE
47
A
ALA
48
n
48
ALA
48
A
ALA
49
n
49
ALA
49
A
GLU
50
n
50
GLU
50
A
ALA
51
n
51
ALA
51
A
LEU
52
n
52
LEU
52
A
HIS
53
n
53
HIS
53
A
GLY
54
n
54
GLY
54
A
GLU
55
n
55
GLU
55
A
HIS
56
n
56
HIS
56
A
GLY
57
n
57
GLY
57
A
ASP
58
n
58
ASP
58
A
LEU
59
n
59
LEU
59
A
ALA
60
n
60
ALA
60
A
SER
61
n
61
SER
61
A
SER
62
n
62
SER
62
A
VAL
63
n
63
VAL
63
A
TYR
64
n
64
TYR
64
A
ALA
65
n
65
ALA
65
A
MET
66
n
66
MET
66
A
ALA
67
n
67
ALA
67
A
THR
68
n
68
THR
68
A
LEU
69
n
69
LEU
69
A
PHE
70
n
70
PHE
70
A
ALA
71
n
71
ALA
71
A
LEU
72
n
72
LEU
72
A
ASP
73
n
73
ASP
73
A
ARG
74
n
74
ARG
74
A
ALA
75
n
75
ALA
75
A
GLY
76
n
76
GLY
76
A
ALA
77
n
77
ALA
77
A
VAL
78
n
78
VAL
78
A
HIS
79
n
79
HIS
79
A
THR
80
n
80
THR
80
A
ILE
81
n
81
ILE
81
A
GLN
82
n
82
GLN
82
A
GLY
83
n
83
GLY
83
A
LEU
84
n
84
LEU
84
A
CYS
85
n
85
CYS
85
A
ARG
86
n
86
ARG
86
A
GLY
87
n
87
GLY
87
A
TYR
88
n
88
TYR
88
A
ASP
89
n
89
ASP
89
A
VAL
90
n
90
VAL
90
A
VAL
91
n
91
VAL
91
A
ILE
92
n
92
ILE
92
A
LEU
93
n
93
LEU
93
A
ASP
94
n
94
ASP
94
A
ARG
95
n
95
ARG
95
A
TYR
96
n
96
TYR
96
A
VAL
97
n
97
VAL
97
A
ALA
98
n
98
ALA
98
A
SER
99
n
99
SER
99
A
ASN
100
n
100
ASN
100
A
ALA
101
n
101
ALA
101
A
ALA
102
n
102
ALA
102
A
TYR
103
n
103
TYR
103
A
SER
104
n
104
SER
104
A
ALA
105
n
105
ALA
105
A
ALA
106
n
106
ALA
106
A
ARG
107
n
107
ARG
107
A
LEU
108
n
108
LEU
108
A
HIS
109
n
109
HIS
109
A
GLU
110
n
110
GLU
110
A
ASN
111
n
111
ASN
111
A
ALA
112
n
112
ALA
112
A
ALA
113
n
113
ALA
113
A
GLY
114
n
114
GLY
114
A
LYS
115
n
115
LYS
115
A
ALA
116
n
116
ALA
116
A
ALA
117
n
117
ALA
117
A
ALA
118
n
118
ALA
118
A
TRP
119
n
119
TRP
119
A
VAL
120
n
120
VAL
120
A
GLN
121
n
121
GLN
121
A
ARG
122
n
122
ARG
122
A
ILE
123
n
123
ILE
123
A
GLU
124
n
124
GLU
124
A
PHE
125
n
125
PHE
125
A
ALA
126
n
126
ALA
126
A
ARG
127
n
127
ARG
127
A
LEU
128
n
128
LEU
128
A
GLY
129
n
129
GLY
129
A
LEU
130
n
130
LEU
130
A
PRO
131
n
131
PRO
131
A
LYS
132
n
132
LYS
132
A
PRO
133
n
133
PRO
133
A
ASP
134
n
134
ASP
134
A
TRP
135
n
135
TRP
135
A
GLN
136
n
136
GLN
136
A
VAL
137
n
137
VAL
137
A
LEU
138
n
138
LEU
138
A
LEU
139
n
139
LEU
139
A
ALA
140
n
140
ALA
140
A
VAL
141
n
141
VAL
141
A
SER
142
n
142
SER
142
A
ALA
143
n
143
ALA
143
A
GLU
144
n
144
GLU
144
A
LEU
145
n
145
LEU
145
A
ALA
146
n
146
ALA
146
A
GLY
147
n
147
GLY
147
A
ALA
148
n
148
GLU
148
A
ARG
149
n
149
ARG
149
A
n
150
150
A
n
151
151
A
n
152
152
A
n
153
153
A
n
154
154
A
n
155
155
A
n
156
156
A
n
157
157
A
n
158
158
A
n
159
159
A
n
160
160
A
n
161
161
A
n
162
162
A
ASP
163
n
163
ASP
163
A
ASN
164
n
164
ASN
164
A
TYR
165
n
165
TYR
165
A
GLU
166
n
166
GLU
166
A
ARG
167
n
167
ARG
167
A
ASP
168
n
168
ASP
168
A
ALA
169
n
169
ALA
169
A
GLU
170
n
170
GLU
170
A
LEU
171
n
171
LEU
171
A
GLN
172
n
172
GLN
172
A
GLN
173
n
173
GLN
173
A
ARG
174
n
174
ARG
174
A
THR
175
n
175
THR
175
A
GLY
176
n
176
GLY
176
A
ALA
177
n
177
ALA
177
A
VAL
178
n
178
VAL
178
A
TYR
179
n
179
TYR
179
A
ALA
180
n
180
ALA
180
A
GLU
181
n
181
GLU
181
A
LEU
182
n
182
LEU
182
A
ALA
183
n
183
ALA
183
A
ALA
184
n
184
ALA
184
A
GLN
185
n
185
GLN
185
A
GLY
186
n
186
GLY
186
A
TRP
187
n
187
TRP
187
A
GLY
188
n
188
GLY
188
A
GLY
189
n
189
GLY
189
A
ARG
190
n
190
ARG
190
A
TRP
191
n
191
TRP
191
A
LEU
192
n
192
LEU
192
A
VAL
193
n
193
VAL
193
A
VAL
194
n
194
VAL
194
A
GLY
195
n
195
GLY
195
A
ALA
196
n
196
ALA
196
A
ASP
197
n
197
ASP
197
A
VAL
198
n
198
VAL
198
A
ASP
199
n
199
ASP
199
A
PRO
200
n
200
PRO
200
A
GLY
201
n
201
GLY
201
A
ARG
202
n
202
ARG
202
A
LEU
203
n
203
LEU
203
A
ALA
204
n
204
ALA
204
A
ALA
205
n
205
ALA
205
A
THR
206
n
206
THR
206
A
LEU
207
n
207
LEU
207
A
ALA
208
n
208
ALA
208
A
n
209
209
A
n
210
210
A
n
211
211
A
n
212
212
A
n
213
213
A
n
214
214
A
MET
1
n
1
MET
1
B
LEU
2
n
2
LEU
2
B
ILE
3
n
3
ILE
3
B
ALA
4
n
4
ALA
4
B
ILE
5
n
5
ILE
5
B
GLU
6
n
6
GLU
6
B
GLY
7
n
7
GLY
7
B
VAL
8
n
8
VAL
8
B
ASP
9
n
9
ASP
9
B
GLY
10
n
10
GLY
10
B
ALA
11
n
11
ALA
11
B
GLY
12
n
12
GLY
12
B
LYS
13
n
13
LYS
13
B
ARG
14
n
14
ARG
14
B
THR
15
n
15
THR
15
B
LEU
16
n
16
LEU
16
B
VAL
17
n
17
VAL
17
B
GLU
18
n
18
GLU
18
B
LYS
19
n
19
LYS
19
B
LEU
20
n
20
LEU
20
B
SER
21
n
21
SER
21
B
GLY
22
n
22
GLY
22
B
ALA
23
n
23
ALA
23
B
PHE
24
n
24
PHE
24
B
ARG
25
n
25
ARG
25
B
ALA
26
n
26
ALA
26
B
ALA
27
n
27
ALA
27
B
GLY
28
n
28
GLY
28
B
ARG
29
n
29
ARG
29
B
SER
30
n
30
SER
30
B
VAL
31
n
31
VAL
31
B
ALA
32
n
32
ALA
32
B
THR
33
n
33
THR
33
B
LEU
34
n
34
LEU
34
B
ALA
35
n
35
ALA
35
B
PHE
36
n
36
PHE
36
B
PRO
37
n
37
PRO
37
B
ARG
38
n
38
ARG
38
B
TYR
39
n
39
TYR
39
B
GLY
40
n
40
GLY
40
B
GLN
41
n
41
GLN
41
B
SER
42
n
42
SER
42
B
VAL
43
n
43
VAL
43
B
ALA
44
n
44
ALA
44
B
ALA
45
n
45
ALA
45
B
ASP
46
n
46
ASP
46
B
ILE
47
n
47
ILE
47
B
ALA
48
n
48
ALA
48
B
ALA
49
n
49
ALA
49
B
GLU
50
n
50
GLU
50
B
ALA
51
n
51
ALA
51
B
LEU
52
n
52
LEU
52
B
HIS
53
n
53
HIS
53
B
GLY
54
n
54
GLY
54
B
GLU
55
n
55
GLU
55
B
HIS
56
n
56
HIS
56
B
GLY
57
n
57
GLY
57
B
ASP
58
n
58
ASP
58
B
LEU
59
n
59
LEU
59
B
ALA
60
n
60
ALA
60
B
SER
61
n
61
SER
61
B
SER
62
n
62
SER
62
B
VAL
63
n
63
VAL
63
B
TYR
64
n
64
TYR
64
B
ALA
65
n
65
ALA
65
B
MET
66
n
66
MET
66
B
ALA
67
n
67
ALA
67
B
THR
68
n
68
THR
68
B
LEU
69
n
69
LEU
69
B
PHE
70
n
70
PHE
70
B
ALA
71
n
71
ALA
71
B
LEU
72
n
72
LEU
72
B
ASP
73
n
73
ASP
73
B
ARG
74
n
74
ARG
74
B
ALA
75
n
75
ALA
75
B
GLY
76
n
76
GLY
76
B
ALA
77
n
77
ALA
77
B
VAL
78
n
78
VAL
78
B
HIS
79
n
79
HIS
79
B
THR
80
n
80
THR
80
B
ILE
81
n
81
ILE
81
B
GLN
82
n
82
GLN
82
B
GLY
83
n
83
GLY
83
B
LEU
84
n
84
LEU
84
B
CYS
85
n
85
CYS
85
B
ARG
86
n
86
ARG
86
B
GLY
87
n
87
GLY
87
B
TYR
88
n
88
TYR
88
B
ASP
89
n
89
ASP
89
B
VAL
90
n
90
VAL
90
B
VAL
91
n
91
VAL
91
B
ILE
92
n
92
ILE
92
B
LEU
93
n
93
LEU
93
B
ASP
94
n
94
ASP
94
B
ARG
95
n
95
ARG
95
B
TYR
96
n
96
TYR
96
B
VAL
97
n
97
VAL
97
B
ALA
98
n
98
ALA
98
B
SER
99
n
99
SER
99
B
ASN
100
n
100
ASN
100
B
ALA
101
n
101
ALA
101
B
ALA
102
n
102
ALA
102
B
TYR
103
n
103
TYR
103
B
SER
104
n
104
SER
104
B
ALA
105
n
105
ALA
105
B
ALA
106
n
106
ALA
106
B
ARG
107
n
107
ARG
107
B
LEU
108
n
108
LEU
108
B
HIS
109
n
109
HIS
109
B
GLU
110
n
110
GLU
110
B
ASN
111
n
111
ASN
111
B
ALA
112
n
112
ALA
112
B
ALA
113
n
113
ALA
113
B
GLY
114
n
114
GLY
114
B
LYS
115
n
115
LYS
115
B
ALA
116
n
116
ALA
116
B
ALA
117
n
117
ALA
117
B
ALA
118
n
118
ALA
118
B
TRP
119
n
119
TRP
119
B
VAL
120
n
120
VAL
120
B
GLN
121
n
121
GLN
121
B
ARG
122
n
122
ARG
122
B
ILE
123
n
123
ILE
123
B
GLU
124
n
124
GLU
124
B
PHE
125
n
125
PHE
125
B
ALA
126
n
126
ALA
126
B
ARG
127
n
127
ARG
127
B
LEU
128
n
128
LEU
128
B
GLY
129
n
129
GLY
129
B
LEU
130
n
130
LEU
130
B
PRO
131
n
131
PRO
131
B
LYS
132
n
132
LYS
132
B
PRO
133
n
133
PRO
133
B
ASP
134
n
134
ASP
134
B
TRP
135
n
135
TRP
135
B
GLN
136
n
136
GLN
136
B
VAL
137
n
137
VAL
137
B
LEU
138
n
138
LEU
138
B
LEU
139
n
139
LEU
139
B
ALA
140
n
140
ALA
140
B
VAL
141
n
141
VAL
141
B
SER
142
n
142
SER
142
B
ALA
143
n
143
ALA
143
B
GLU
144
n
144
GLU
144
B
LEU
145
n
145
LEU
145
B
ALA
146
n
146
ALA
146
B
GLY
147
n
147
GLY
147
B
GLU
148
n
148
GLU
148
B
ARG
149
n
149
ARG
149
B
SER
150
n
150
SER
150
B
ARG
151
n
151
ARG
151
B
GLY
152
n
152
GLY
152
B
ARG
153
n
153
ARG
153
B
ALA
154
n
154
ALA
154
B
n
155
155
B
n
156
156
B
n
157
157
B
n
158
158
B
n
159
159
B
ARG
160
n
160
ARG
160
B
ALA
161
n
161
ALA
161
B
ARG
162
n
162
ARG
162
B
ASP
163
n
163
ASP
163
B
ASN
164
n
164
ASN
164
B
TYR
165
n
165
TYR
165
B
GLU
166
n
166
GLU
166
B
ARG
167
n
167
ARG
167
B
ASP
168
n
168
ASP
168
B
ALA
169
n
169
ALA
169
B
GLU
170
n
170
GLU
170
B
LEU
171
n
171
LEU
171
B
GLN
172
n
172
GLN
172
B
GLN
173
n
173
GLN
173
B
ARG
174
n
174
ARG
174
B
THR
175
n
175
THR
175
B
GLY
176
n
176
GLY
176
B
ALA
177
n
177
ALA
177
B
VAL
178
n
178
VAL
178
B
TYR
179
n
179
TYR
179
B
ALA
180
n
180
ALA
180
B
GLU
181
n
181
GLU
181
B
LEU
182
n
182
LEU
182
B
ALA
183
n
183
ALA
183
B
ALA
184
n
184
ALA
184
B
GLN
185
n
185
GLN
185
B
GLY
186
n
186
GLY
186
B
TRP
187
n
187
TRP
187
B
GLY
188
n
188
GLY
188
B
GLY
189
n
189
GLY
189
B
ALA
190
n
190
ARG
190
B
TRP
191
n
191
TRP
191
B
LEU
192
n
192
LEU
192
B
VAL
193
n
193
VAL
193
B
VAL
194
n
194
VAL
194
B
GLY
195
n
195
GLY
195
B
ALA
196
n
196
ALA
196
B
ASP
197
n
197
ASP
197
B
VAL
198
n
198
VAL
198
B
ASP
199
n
199
ASP
199
B
PRO
200
n
200
PRO
200
B
GLY
201
n
201
GLY
201
B
ARG
202
n
202
ARG
202
B
LEU
203
n
203
LEU
203
B
ALA
204
n
204
ALA
204
B
ALA
205
n
205
ALA
205
B
THR
206
n
206
THR
206
B
LEU
207
n
207
LEU
207
B
ALA
208
n
208
ALA
208
B
n
209
209
B
n
210
210
B
n
211
211
B
n
212
212
B
n
213
213
B
n
214
214
B
author_defined_assembly
2
dimeric
B
ASP
9
B
OD1
ASP
9
1_555
B
MG
215
F
MG
MG
1_555
B
TYD
216
G
O2B
TYD
1_555
163.4
B
ASP
9
B
OD1
ASP
9
1_555
B
MG
215
F
MG
MG
1_555
B
TYD
216
G
O2A
TYD
1_555
89.1
B
TYD
216
G
O2B
TYD
1_555
B
MG
215
F
MG
MG
1_555
B
TYD
216
G
O2A
TYD
1_555
83.9
B
ASP
9
B
OD1
ASP
9
1_555
B
MG
215
F
MG
MG
1_555
B
HOH
469
J
O
HOH
1_555
72.6
B
TYD
216
G
O2B
TYD
1_555
B
MG
215
F
MG
MG
1_555
B
HOH
469
J
O
HOH
1_555
92.3
B
TYD
216
G
O2A
TYD
1_555
B
MG
215
F
MG
MG
1_555
B
HOH
469
J
O
HOH
1_555
89.7
B
ASP
9
B
OD1
ASP
9
1_555
B
MG
215
F
MG
MG
1_555
B
HOH
502
J
O
HOH
1_555
88.8
B
TYD
216
G
O2B
TYD
1_555
B
MG
215
F
MG
MG
1_555
B
HOH
502
J
O
HOH
1_555
102.2
B
TYD
216
G
O2A
TYD
1_555
B
MG
215
F
MG
MG
1_555
B
HOH
502
J
O
HOH
1_555
67.7
B
HOH
469
J
O
HOH
1_555
B
MG
215
F
MG
MG
1_555
B
HOH
502
J
O
HOH
1_555
151.3
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ALA
32
A
N
ALA
32
A
O
ILE
92
A
O
ILE
92
A
O
LEU
93
A
O
LEU
93
A
N
ILE
3
A
N
ILE
3
A
N
ALA
4
A
N
ALA
4
A
O
VAL
137
A
O
VAL
137
A
N
LEU
138
A
N
LEU
138
A
O
VAL
194
A
O
VAL
194
B
N
ALA
32
B
N
ALA
32
B
O
ILE
92
B
O
ILE
92
B
O
LEU
93
B
O
LEU
93
B
N
ILE
5
B
N
ILE
5
B
N
ALA
4
B
N
ALA
4
B
O
TRP
135
B
O
TRP
135
B
N
LEU
138
B
N
LEU
138
B
O
VAL
194
B
O
VAL
194
1
A
CG
ASP
9
A
CG
ASP
9
1
Y
1
A
OD1
ASP
9
A
OD1
ASP
9
1
Y
1
A
OD2
ASP
9
A
OD2
ASP
9
1
Y
1
A
CD
ARG
14
A
CD
ARG
14
1
Y
1
A
NE
ARG
14
A
NE
ARG
14
1
Y
1
A
CZ
ARG
14
A
CZ
ARG
14
1
Y
1
A
NH1
ARG
14
A
NH1
ARG
14
1
Y
1
A
NH2
ARG
14
A
NH2
ARG
14
1
Y
1
A
OE1
GLU
55
A
OE1
GLU
55
1
Y
1
A
OE2
GLU
55
A
OE2
GLU
55
1
Y
1
A
CG
GLU
144
A
CG
GLU
144
1
Y
1
A
CD
GLU
144
A
CD
GLU
144
1
Y
1
A
OE1
GLU
144
A
OE1
GLU
144
1
Y
1
A
OE2
GLU
144
A
OE2
GLU
144
1
Y
1
A
CG
GLU
148
A
CG
GLU
148
1
Y
1
A
CD
GLU
148
A
CD
GLU
148
1
Y
1
A
OE1
GLU
148
A
OE1
GLU
148
1
Y
1
A
OE2
GLU
148
A
OE2
GLU
148
1
Y
1
A
CG
ASN
164
A
CG
ASN
164
1
Y
1
A
OD1
ASN
164
A
OD1
ASN
164
1
Y
1
A
ND2
ASN
164
A
ND2
ASN
164
1
Y
1
A
CG
GLU
166
A
CG
GLU
166
1
Y
1
A
CD
GLU
166
A
CD
GLU
166
1
Y
1
A
OE1
GLU
166
A
OE1
GLU
166
1
Y
1
A
OE2
GLU
166
A
OE2
GLU
166
1
Y
1
A
CG
ARG
167
A
CG
ARG
167
1
Y
1
A
CD
ARG
167
A
CD
ARG
167
1
Y
1
A
NE
ARG
167
A
NE
ARG
167
1
Y
1
A
CZ
ARG
167
A
CZ
ARG
167
1
Y
1
A
NH1
ARG
167
A
NH1
ARG
167
1
Y
1
A
NH2
ARG
167
A
NH2
ARG
167
1
Y
1
A
CG
LEU
171
A
CG
LEU
171
1
Y
1
A
CD1
LEU
171
A
CD1
LEU
171
1
Y
1
A
CD2
LEU
171
A
CD2
LEU
171
1
Y
1
A
CG
ARG
190
A
CG
ARG
190
1
Y
1
A
CD
ARG
190
A
CD
ARG
190
1
Y
1
A
NE
ARG
190
A
NE
ARG
190
1
Y
1
A
CZ
ARG
190
A
CZ
ARG
190
1
Y
1
A
NH1
ARG
190
A
NH1
ARG
190
1
Y
1
A
NH2
ARG
190
A
NH2
ARG
190
1
Y
1
B
CG
ARG
86
B
CG
ARG
86
1
Y
1
B
CD
ARG
86
B
CD
ARG
86
1
Y
1
B
NE
ARG
86
B
NE
ARG
86
1
Y
1
B
CZ
ARG
86
B
CZ
ARG
86
1
Y
1
B
NH1
ARG
86
B
NH1
ARG
86
1
Y
1
B
NH2
ARG
86
B
NH2
ARG
86
1
Y
1
B
CG
ARG
153
B
CG
ARG
153
1
Y
1
B
CD
ARG
153
B
CD
ARG
153
1
Y
1
B
NE
ARG
153
B
NE
ARG
153
1
Y
1
B
CZ
ARG
153
B
CZ
ARG
153
1
Y
1
B
NH1
ARG
153
B
NH1
ARG
153
1
Y
1
B
NH2
ARG
153
B
NH2
ARG
153
1
Y
1
B
CD
ARG
167
B
CD
ARG
167
1
Y
1
B
NE
ARG
167
B
NE
ARG
167
1
Y
1
B
CZ
ARG
167
B
CZ
ARG
167
1
Y
1
B
NH1
ARG
167
B
NH1
ARG
167
1
Y
1
B
NH2
ARG
167
B
NH2
ARG
167
1
Y
1
B
CG
ARG
190
B
CG
ARG
190
1
Y
1
B
CD
ARG
190
B
CD
ARG
190
1
Y
1
B
NE
ARG
190
B
NE
ARG
190
1
Y
1
B
CZ
ARG
190
B
CZ
ARG
190
1
Y
1
B
NH1
ARG
190
B
NH1
ARG
190
1
Y
1
B
NH2
ARG
190
B
NH2
ARG
190
1
Y
1
B
O3
DPO
414
H
O3
DPO
1
1
N
1
A
SER
150
A
SER
150
1
Y
1
A
ARG
151
A
ARG
151
1
Y
1
A
GLY
152
A
GLY
152
1
Y
1
A
ARG
153
A
ARG
153
1
Y
1
A
ALA
154
A
ALA
154
1
Y
1
A
GLN
155
A
GLN
155
1
Y
1
A
ARG
156
A
ARG
156
1
Y
1
A
ASP
157
A
ASP
157
1
Y
1
A
PRO
158
A
PRO
158
1
Y
1
A
GLY
159
A
GLY
159
1
Y
1
A
ARG
160
A
ARG
160
1
Y
1
A
ALA
161
A
ALA
161
1
Y
1
A
ARG
162
A
ARG
162
1
Y
1
A
PRO
209
A
PRO
209
1
Y
1
A
PRO
210
A
PRO
210
1
Y
1
A
ASP
211
A
ASP
211
1
Y
1
A
VAL
212
A
VAL
212
1
Y
1
A
PRO
213
A
PRO
213
1
Y
1
A
SER
214
A
SER
214
1
Y
1
B
GLN
155
B
GLN
155
1
Y
1
B
ARG
156
B
ARG
156
1
Y
1
B
ASP
157
B
ASP
157
1
Y
1
B
PRO
158
B
PRO
158
1
Y
1
B
GLY
159
B
GLY
159
1
Y
1
B
PRO
209
B
PRO
209
1
Y
1
B
PRO
210
B
PRO
210
1
Y
1
B
ASP
211
B
ASP
211
1
Y
1
B
VAL
212
B
VAL
212
1
Y
1
B
PRO
213
B
PRO
213
1
Y
1
B
SER
214
B
SER
214
1
Y
1
B
B
NH1
O
ARG
HOH
151
455
2.06
1
A
ARG
95
79.02
128.97
1
A
TYR
96
-142.54
-153.06
1
A
ALA
196
-64.45
0.79
1
B
ARG
95
78.56
145.43
1
B
TYR
96
-160.06
-158.24
1
B
ASN
111
-111.95
-165.24
1
B
ASP
197
-91.39
35.32
PROTEIN_REP.PARAM
PROTEIN.TOP
ION.PARAM
ION.TOP
WATER.PARAM
WATER.TOP
TMP+TDP+ACT+DPO.PAR
TMP+TDP+ACT+DPO.TOP
35.9
6.08
4.70
0.00
6.08
0.00
-12.17
Monomer A contains the apo-structure. Monomer B contains the TDP-Mg++-ADP complex.
0.28
0.009
0.236
0.238
0.236
2.30
19.76
1054
21577
21577
4.9
99.1
RANDOM
1848944.31
1848944.31
0.000000
1
RESTRAINED
THROUGHOUT
0.0
OTHER
PDB ENTRY 1N5K
Engh & Huber
FLAT MODEL
63.1841
0.34923
0.36
0.29
5.0
0.23
-0.02
2.30
19.76
205
3173
63
0
2905
0.009
1.5
21.0
1.09
3.41
1.50
5.31
2.00
5.06
2.00
6.32
2.50
0.309
0.024
0.247
2.44
165
3345
3345
6
4.7
100.0
41.0
2.30
19.76
1N5L
21648
21648
0.0
-3.0
0.107
1
4.6
6.9
99.4
2.3
2.42
1.9
2977
0.381
7.2
100
data reduction
MOSFLM
data scaling
SCALA
refinement
CNS
1.0
data scaling
CCP4
(SCALA)
phasing
CNS
1.0
CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS THYMIDYLATE KINASE CRYSTALLIZED IN SODIUM MALONATE, AFTER CATALYSIS IN THE CRYSTAL (2.3 A RESOLUTION)
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
4
N
N
5
N
N
6
N
N
7
N
N
7
N
N
The asymmetric unit contains the functional dimer.
A
GLY
12
A
GLY
12
HELX_P
A
ALA
27
A
ALA
27
1
1
16
A
SER
42
A
SER
42
HELX_P
A
HIS
53
A
HIS
53
1
2
12
A
ASP
58
A
ASP
58
HELX_P
A
SER
61
A
SER
61
5
3
4
A
SER
62
A
SER
62
HELX_P
A
GLY
76
A
GLY
76
1
4
15
A
ALA
77
A
ALA
77
HELX_P
A
TYR
88
A
TYR
88
1
5
12
A
TYR
96
A
TYR
96
HELX_P
A
HIS
109
A
HIS
109
1
6
14
A
GLY
114
A
GLY
114
HELX_P
A
PHE
125
A
PHE
125
1
7
12
A
SER
142
A
SER
142
HELX_P
A
ARG
149
A
ARG
149
1
8
8
A
ASP
168
A
ASP
168
HELX_P
A
GLY
186
A
GLY
186
1
9
19
A
ASP
199
A
ASP
199
HELX_P
A
ALA
208
A
ALA
208
1
10
10
B
GLY
12
B
GLY
12
HELX_P
B
ALA
27
B
ALA
27
1
11
16
B
SER
42
B
SER
42
HELX_P
B
HIS
53
B
HIS
53
1
12
12
B
ASP
58
B
ASP
58
HELX_P
B
SER
61
B
SER
61
5
13
4
B
SER
62
B
SER
62
HELX_P
B
GLY
76
B
GLY
76
1
14
15
B
ALA
77
B
ALA
77
HELX_P
B
TYR
88
B
TYR
88
1
15
12
B
TYR
96
B
TYR
96
HELX_P
B
LEU
108
B
LEU
108
1
16
13
B
GLY
114
B
GLY
114
HELX_P
B
ALA
126
B
ALA
126
1
17
13
B
SER
142
B
SER
142
HELX_P
B
ARG
153
B
ARG
153
1
18
12
B
ASP
168
B
ASP
168
HELX_P
B
GLN
185
B
GLN
185
1
19
18
B
ASP
199
B
ASP
199
HELX_P
B
ALA
208
B
ALA
208
1
20
10
metalc
2.316
B
ASP
9
B
OD1
ASP
9
1_555
B
MG
215
F
MG
MG
1_555
metalc
2.235
B
MG
215
F
MG
MG
1_555
B
TYD
216
G
O2B
TYD
1_555
metalc
1.962
B
MG
215
F
MG
MG
1_555
B
TYD
216
G
O2A
TYD
1_555
metalc
2.803
B
MG
215
F
MG
MG
1_555
B
HOH
469
J
O
HOH
1_555
metalc
2.990
B
MG
215
F
MG
MG
1_555
B
HOH
502
J
O
HOH
1_555
TRANSFERASE
TRANSFERASE (ATP:TMP PHOSPHOTRANSFERASE), KINASE, TRANSFERASE
A
PHE
36
A
PHE
36
1
A
PRO
37
A
PRO
37
-0.15
B
PHE
36
B
PHE
36
1
B
PRO
37
B
PRO
37
0.08
KTHY_MYCTU
UNP
1
1
O05891
MLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLASSVYAMATLFALDRAGAVHT
IQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGR
ARDNYERDAELQQRTGAVYAELAAQGWGGRWLVVGADVDPGRLAATLAPPDVPS
1N5L
PDB
1
1N5L
1
214
1N5L
1
214
O05891
A
1
1
214
1
214
1N5L
1
214
1N5L
B
2
1
214
5
5
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
A
VAL
31
A
VAL
31
A
ALA
35
A
ALA
35
A
VAL
90
A
VAL
90
A
ASP
94
A
ASP
94
A
LEU
2
A
LEU
2
A
GLU
6
A
GLU
6
A
TRP
135
A
TRP
135
A
LEU
139
A
LEU
139
A
ARG
190
A
ARG
190
A
VAL
194
A
VAL
194
B
VAL
31
B
VAL
31
B
ALA
35
B
ALA
35
B
VAL
90
B
VAL
90
B
ASP
94
B
ASP
94
B
LEU
2
B
LEU
2
B
GLU
6
B
GLU
6
B
TRP
135
B
TRP
135
B
LEU
139
B
LEU
139
B
TRP
191
B
TRP
191
B
VAL
194
B
VAL
194
BINDING SITE FOR RESIDUE MG B 215
B
MG
215
Software
5
BINDING SITE FOR RESIDUE ACT A 412
A
ACT
412
Software
3
BINDING SITE FOR RESIDUE ACT A 413
A
ACT
413
Software
4
BINDING SITE FOR RESIDUE TMP A 409
A
TMP
409
Software
10
BINDING SITE FOR RESIDUE TYD B 216
B
TYD
216
Software
17
BINDING SITE FOR RESIDUE DPO B 414
B
DPO
414
Software
7
B
ASP
9
B
ASP
9
5
1_555
B
GLU
166
B
GLU
166
5
1_555
B
TYD
216
G
TYD
5
1_555
B
HOH
469
J
HOH
5
1_555
B
HOH
502
J
HOH
5
1_555
A
ARG
122
A
ARG
122
3
1_555
A
ARG
127
A
ARG
127
3
1_555
B
ASN
111
B
ASN
111
3
5_665
A
GLY
10
A
GLY
10
4
1_555
A
ALA
11
A
ALA
11
4
1_555
A
GLY
12
A
GLY
12
4
1_555
A
LYS
13
A
LYS
13
4
1_555
A
PRO
37
A
PRO
37
10
1_555
A
TYR
39
A
TYR
39
10
1_555
A
PHE
70
A
PHE
70
10
1_555
A
ARG
74
A
ARG
74
10
1_555
A
ARG
95
A
ARG
95
10
1_555
A
ASN
100
A
ASN
100
10
1_555
A
TYR
103
A
TYR
103
10
1_555
A
TYR
165
A
TYR
165
10
1_555
A
HOH
434
I
HOH
10
1_555
A
HOH
492
I
HOH
10
1_555
B
ASP
9
B
ASP
9
17
1_555
B
PHE
36
B
PHE
36
17
1_555
B
PRO
37
B
PRO
37
17
1_555
B
TYR
39
B
TYR
39
17
1_555
B
LEU
52
B
LEU
52
17
1_555
B
PHE
70
B
PHE
70
17
1_555
B
ARG
74
B
ARG
74
17
1_555
B
ARG
95
B
ARG
95
17
1_555
B
SER
99
B
SER
99
17
1_555
B
ASN
100
B
ASN
100
17
1_555
B
TYR
103
B
TYR
103
17
1_555
B
TYR
165
B
TYR
165
17
1_555
B
MG
215
F
MG
17
1_555
B
HOH
415
J
HOH
17
1_555
B
HOH
427
J
HOH
17
1_555
B
HOH
469
J
HOH
17
1_555
B
HOH
502
J
HOH
17
1_555
B
GLY
10
B
GLY
10
7
1_555
B
ALA
11
B
ALA
11
7
1_555
B
GLY
12
B
GLY
12
7
1_555
B
LYS
13
B
LYS
13
7
1_555
B
ARG
14
B
ARG
14
7
1_555
B
THR
15
B
THR
15
7
1_555
B
HOH
502
J
HOH
7
1_555
152
P 31 2 1