0.014575
0.000000
0.000000
0.000000
0.013594
0.000000
0.000000
0.000000
0.013159
0.00000
0.00000
0.00000
Kreusch, A.
Spraggon, G.
Lee, C.C.
Klock, H.
McMullan, D.
Ng, K.
Shin, T.
Vincent, J.
Warner, I.
Ericson, C.
Lesley, S.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
68.612
73.562
75.995
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
C
N
138
N
O
N
139
N
C
N
140
N
O
N
141
N
C
N
142
N
O
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
N
N
152
S
C
N
153
N
C
N
154
N
O
N
155
N
C
Y
156
N
C
Y
157
N
N
Y
158
N
C
Y
159
N
C
Y
160
N
N
N
161
N
O
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
O
N
173
N
H
N
174
N
H
N
175
N
N
N
176
S
C
N
177
N
C
N
178
N
O
N
179
S
C
N
180
N
C
N
181
N
C
N
182
N
C
N
183
N
O
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
N
N
198
S
C
N
199
N
C
N
200
N
O
N
201
N
C
N
202
N
C
N
203
N
C
N
204
N
C
N
205
N
O
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
N
N
220
S
C
N
221
N
C
N
222
N
O
N
223
N
C
N
224
N
C
N
225
N
C
N
226
N
C
N
227
N
N
N
228
N
O
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
N
N
245
S
C
N
246
N
C
N
247
N
O
N
248
N
C
N
249
N
C
N
250
N
S
N
251
N
C
N
252
N
O
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
N
N
265
S
C
N
266
N
C
N
267
N
O
N
268
N
C
Y
269
N
C
Y
270
N
C
Y
271
N
C
Y
272
N
C
Y
273
N
C
Y
274
N
C
N
275
N
O
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
N
C
N
292
N
C
N
293
N
C
N
294
N
O
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
N
C
N
309
N
O
N
310
N
O
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
R
C
N
323
N
O
N
324
N
C
N
325
N
O
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
N
N
336
S
C
N
337
N
C
N
338
N
O
N
339
N
C
Y
340
N
C
Y
341
N
C
Y
342
N
C
Y
343
N
C
Y
344
N
C
Y
345
N
C
N
346
N
O
N
347
N
O
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
N
N
360
S
C
N
361
N
C
N
362
N
O
N
363
N
C
N
364
N
C
N
365
N
C
N
366
N
O
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
ZN
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
Y
153
N
sing
Y
154
N
doub
Y
155
N
doub
N
156
N
sing
Y
157
N
sing
N
158
N
sing
Y
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
doub
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
doub
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
doub
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
doub
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
Y
261
N
doub
Y
262
N
sing
Y
263
N
sing
N
264
N
sing
Y
265
N
doub
N
266
N
sing
Y
267
N
doub
N
268
N
sing
Y
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
doub
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
doub
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
doub
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
Y
330
N
doub
Y
331
N
sing
Y
332
N
sing
N
333
N
sing
Y
334
N
doub
N
335
N
sing
Y
336
N
doub
N
337
N
sing
Y
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
UK
J.MOL.BIOL.
JMOBAK
0070
0022-2836
330
309
321
10.1016/S0022-2836(03)00596-5
12823970
Structure analysis of peptide deformylases from streptococcus pneumoniae,staphylococcus aureus, thermotoga maritima, and pseudomonas aeruginosa: snapshots of the oxygen sensitivity of peptide deformylase
2003
10.2210/pdb1n5n/pdb
pdb_00001n5n
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
90
1
CCD
2002-01-08
ADSC QUANTUM 4
SINGLE WAVELENGTH
M
x-ray
1
1.0
1.0
5.0.3
ALS
1.0
SYNCHROTRON
ALS BEAMLINE 5.0.3
20866.818
Peptide deformylase
3.5.1.88
D84E
2
man
polymer
65.409
ZINC ION
2
syn
non-polymer
92.094
GLYCEROL
3
syn
non-polymer
18.015
water
262
nat
water
PDF, Polypeptide deformylase
no
no
MGSDKIHHHHHHMAILNILEFPDPRLRTIAKPVEVVDDAVRQLIDDMFETMYEAPGIGLAATQVNVHKRIVVMDLSEDKS
EPRVFINPEFEPLTEEMDQYQEGCLSVPGFYENVDRPQKVRIKALDRDGNPFEEVAEGLLAVCIQHECDHLNGKLFVDYL
STLKRDRIRKKLEKQHRQQA
MGSDKIHHHHHHMAILNILEFPDPRLRTIAKPVEVVDDAVRQLIDDMFETMYEAPGIGLAATQVNVHKRIVVMDLSEDKS
EPRVFINPEFEPLTEEMDQYQEGCLSVPGFYENVDRPQKVRIKALDRDGNPFEEVAEGLLAVCIQHECDHLNGKLFVDYL
STLKRDRIRKKLEKQHRQQA
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Pseudomonas
Escherichia
sample
287
Pseudomonas aeruginosa
562
Escherichia coli
geneHogs
plasmid
pMH4
1
2.30
46.44
VAPOR DIFFUSION, SITTING DROP
6.0
Peg6000, LiCl, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K
298
database_2
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
chem_comp_atom
chem_comp_bond
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Non-polymer description
Version format compliance
Database references
Derived calculations
Data collection
Refinement description
1
0
2003-06-24
1
1
2008-04-28
1
2
2011-07-13
1
3
2021-10-27
1
4
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Peptide deformylase from Staphylococcus aureus
peptide deformylase from Streptococcus pneumoniae
peptide deformylase from Thermotoga maritima
RCSB
Y
RCSB
2002-11-06
REL
ZN
ZINC ION
GOL
GLYCEROL
HOH
water
1BS4
PDB Entry 1BS4
PDB
experimental model
ZN2
1
2
ZN
ZN
401
A
DRG
1
3
GOL
GOL
301
A
DRG
1
3
GOL
GOL
303
A
ZN2
2
2
ZN
ZN
402
B
DRG
1
3
GOL
GOL
302
B
WAT
2
4
HOH
HOH
402
A
WAT
3
4
HOH
HOH
403
A
WAT
4
4
HOH
HOH
404
A
WAT
6
4
HOH
HOH
405
A
WAT
7
4
HOH
HOH
406
A
WAT
9
4
HOH
HOH
407
A
WAT
10
4
HOH
HOH
408
A
WAT
12
4
HOH
HOH
409
A
WAT
13
4
HOH
HOH
410
A
WAT
17
4
HOH
HOH
411
A
WAT
18
4
HOH
HOH
412
A
WAT
19
4
HOH
HOH
413
A
WAT
20
4
HOH
HOH
414
A
WAT
21
4
HOH
HOH
415
A
WAT
22
4
HOH
HOH
416
A
WAT
23
4
HOH
HOH
417
A
WAT
25
4
HOH
HOH
418
A
WAT
27
4
HOH
HOH
419
A
WAT
28
4
HOH
HOH
420
A
WAT
32
4
HOH
HOH
421
A
WAT
35
4
HOH
HOH
422
A
WAT
36
4
HOH
HOH
423
A
WAT
37
4
HOH
HOH
424
A
WAT
38
4
HOH
HOH
425
A
WAT
40
4
HOH
HOH
426
A
WAT
41
4
HOH
HOH
427
A
WAT
42
4
HOH
HOH
428
A
WAT
43
4
HOH
HOH
429
A
WAT
47
4
HOH
HOH
430
A
WAT
51
4
HOH
HOH
431
A
WAT
53
4
HOH
HOH
432
A
WAT
54
4
HOH
HOH
433
A
WAT
55
4
HOH
HOH
434
A
WAT
56
4
HOH
HOH
435
A
WAT
58
4
HOH
HOH
436
A
WAT
60
4
HOH
HOH
437
A
WAT
61
4
HOH
HOH
438
A
WAT
64
4
HOH
HOH
439
A
WAT
68
4
HOH
HOH
440
A
WAT
70
4
HOH
HOH
441
A
WAT
71
4
HOH
HOH
442
A
WAT
73
4
HOH
HOH
443
A
WAT
74
4
HOH
HOH
444
A
WAT
75
4
HOH
HOH
445
A
WAT
77
4
HOH
HOH
446
A
WAT
79
4
HOH
HOH
447
A
WAT
80
4
HOH
HOH
448
A
WAT
82
4
HOH
HOH
449
A
WAT
85
4
HOH
HOH
450
A
WAT
86
4
HOH
HOH
451
A
WAT
87
4
HOH
HOH
452
A
WAT
89
4
HOH
HOH
453
A
WAT
90
4
HOH
HOH
454
A
WAT
92
4
HOH
HOH
455
A
WAT
96
4
HOH
HOH
456
A
WAT
99
4
HOH
HOH
457
A
WAT
100
4
HOH
HOH
458
A
WAT
101
4
HOH
HOH
459
A
WAT
103
4
HOH
HOH
460
A
WAT
105
4
HOH
HOH
461
A
WAT
106
4
HOH
HOH
462
A
WAT
110
4
HOH
HOH
463
A
WAT
113
4
HOH
HOH
464
A
WAT
117
4
HOH
HOH
465
A
WAT
118
4
HOH
HOH
466
A
WAT
119
4
HOH
HOH
467
A
WAT
120
4
HOH
HOH
468
A
WAT
121
4
HOH
HOH
469
A
WAT
122
4
HOH
HOH
470
A
WAT
123
4
HOH
HOH
471
A
WAT
124
4
HOH
HOH
472
A
WAT
125
4
HOH
HOH
473
A
WAT
126
4
HOH
HOH
474
A
WAT
127
4
HOH
HOH
475
A
WAT
128
4
HOH
HOH
476
A
WAT
129
4
HOH
HOH
477
A
WAT
130
4
HOH
HOH
478
A
WAT
131
4
HOH
HOH
479
A
WAT
132
4
HOH
HOH
480
A
WAT
144
4
HOH
HOH
481
A
WAT
154
4
HOH
HOH
482
A
WAT
155
4
HOH
HOH
483
A
WAT
156
4
HOH
HOH
484
A
WAT
157
4
HOH
HOH
485
A
WAT
158
4
HOH
HOH
486
A
WAT
161
4
HOH
HOH
487
A
WAT
162
4
HOH
HOH
488
A
WAT
163
4
HOH
HOH
489
A
WAT
164
4
HOH
HOH
490
A
WAT
165
4
HOH
HOH
491
A
WAT
166
4
HOH
HOH
492
A
WAT
167
4
HOH
HOH
493
A
WAT
179
4
HOH
HOH
494
A
WAT
180
4
HOH
HOH
495
A
WAT
181
4
HOH
HOH
496
A
WAT
182
4
HOH
HOH
497
A
WAT
183
4
HOH
HOH
498
A
WAT
184
4
HOH
HOH
499
A
WAT
185
4
HOH
HOH
500
A
WAT
186
4
HOH
HOH
501
A
WAT
187
4
HOH
HOH
502
A
WAT
188
4
HOH
HOH
503
A
WAT
189
4
HOH
HOH
504
A
WAT
190
4
HOH
HOH
505
A
WAT
191
4
HOH
HOH
506
A
WAT
203
4
HOH
HOH
507
A
WAT
204
4
HOH
HOH
508
A
WAT
205
4
HOH
HOH
509
A
WAT
206
4
HOH
HOH
510
A
WAT
207
4
HOH
HOH
511
A
WAT
209
4
HOH
HOH
512
A
WAT
210
4
HOH
HOH
513
A
WAT
211
4
HOH
HOH
514
A
WAT
212
4
HOH
HOH
515
A
WAT
213
4
HOH
HOH
516
A
WAT
217
4
HOH
HOH
517
A
WAT
218
4
HOH
HOH
518
A
WAT
219
4
HOH
HOH
519
A
WAT
224
4
HOH
HOH
520
A
WAT
225
4
HOH
HOH
521
A
WAT
226
4
HOH
HOH
522
A
WAT
233
4
HOH
HOH
523
A
WAT
234
4
HOH
HOH
524
A
WAT
235
4
HOH
HOH
525
A
WAT
236
4
HOH
HOH
526
A
WAT
237
4
HOH
HOH
527
A
WAT
238
4
HOH
HOH
528
A
WAT
239
4
HOH
HOH
529
A
WAT
240
4
HOH
HOH
530
A
WAT
241
4
HOH
HOH
531
A
WAT
248
4
HOH
HOH
532
A
WAT
249
4
HOH
HOH
533
A
WAT
250
4
HOH
HOH
534
A
WAT
252
4
HOH
HOH
535
A
WAT
253
4
HOH
HOH
536
A
WAT
254
4
HOH
HOH
537
A
WAT
255
4
HOH
HOH
538
A
WAT
256
4
HOH
HOH
539
A
WAT
257
4
HOH
HOH
540
A
WAT
258
4
HOH
HOH
541
A
WAT
1
4
HOH
HOH
403
B
WAT
5
4
HOH
HOH
404
B
WAT
8
4
HOH
HOH
405
B
WAT
11
4
HOH
HOH
406
B
WAT
14
4
HOH
HOH
407
B
WAT
15
4
HOH
HOH
408
B
WAT
16
4
HOH
HOH
409
B
WAT
24
4
HOH
HOH
410
B
WAT
26
4
HOH
HOH
411
B
WAT
29
4
HOH
HOH
412
B
WAT
30
4
HOH
HOH
413
B
WAT
31
4
HOH
HOH
414
B
WAT
33
4
HOH
HOH
415
B
WAT
34
4
HOH
HOH
416
B
WAT
39
4
HOH
HOH
417
B
WAT
44
4
HOH
HOH
418
B
WAT
45
4
HOH
HOH
419
B
WAT
46
4
HOH
HOH
420
B
WAT
48
4
HOH
HOH
421
B
WAT
49
4
HOH
HOH
422
B
WAT
50
4
HOH
HOH
423
B
WAT
52
4
HOH
HOH
424
B
WAT
57
4
HOH
HOH
425
B
WAT
59
4
HOH
HOH
426
B
WAT
62
4
HOH
HOH
427
B
WAT
63
4
HOH
HOH
428
B
WAT
65
4
HOH
HOH
429
B
WAT
66
4
HOH
HOH
430
B
WAT
67
4
HOH
HOH
431
B
WAT
69
4
HOH
HOH
432
B
WAT
72
4
HOH
HOH
433
B
WAT
76
4
HOH
HOH
434
B
WAT
78
4
HOH
HOH
435
B
WAT
81
4
HOH
HOH
436
B
WAT
83
4
HOH
HOH
437
B
WAT
84
4
HOH
HOH
438
B
WAT
88
4
HOH
HOH
439
B
WAT
91
4
HOH
HOH
440
B
WAT
93
4
HOH
HOH
441
B
WAT
94
4
HOH
HOH
442
B
WAT
95
4
HOH
HOH
443
B
WAT
97
4
HOH
HOH
444
B
WAT
98
4
HOH
HOH
445
B
WAT
102
4
HOH
HOH
446
B
WAT
104
4
HOH
HOH
447
B
WAT
107
4
HOH
HOH
448
B
WAT
108
4
HOH
HOH
449
B
WAT
109
4
HOH
HOH
450
B
WAT
111
4
HOH
HOH
451
B
WAT
112
4
HOH
HOH
452
B
WAT
114
4
HOH
HOH
453
B
WAT
115
4
HOH
HOH
454
B
WAT
116
4
HOH
HOH
455
B
WAT
133
4
HOH
HOH
456
B
WAT
134
4
HOH
HOH
457
B
WAT
135
4
HOH
HOH
458
B
WAT
136
4
HOH
HOH
459
B
WAT
137
4
HOH
HOH
460
B
WAT
138
4
HOH
HOH
461
B
WAT
139
4
HOH
HOH
462
B
WAT
140
4
HOH
HOH
463
B
WAT
141
4
HOH
HOH
464
B
WAT
142
4
HOH
HOH
465
B
WAT
143
4
HOH
HOH
466
B
WAT
145
4
HOH
HOH
467
B
WAT
146
4
HOH
HOH
468
B
WAT
147
4
HOH
HOH
469
B
WAT
148
4
HOH
HOH
470
B
WAT
149
4
HOH
HOH
471
B
WAT
150
4
HOH
HOH
472
B
WAT
151
4
HOH
HOH
473
B
WAT
152
4
HOH
HOH
474
B
WAT
153
4
HOH
HOH
475
B
WAT
159
4
HOH
HOH
476
B
WAT
160
4
HOH
HOH
477
B
WAT
168
4
HOH
HOH
478
B
WAT
169
4
HOH
HOH
479
B
WAT
170
4
HOH
HOH
480
B
WAT
171
4
HOH
HOH
481
B
WAT
172
4
HOH
HOH
482
B
WAT
173
4
HOH
HOH
483
B
WAT
174
4
HOH
HOH
484
B
WAT
175
4
HOH
HOH
485
B
WAT
176
4
HOH
HOH
486
B
WAT
177
4
HOH
HOH
487
B
WAT
178
4
HOH
HOH
488
B
WAT
192
4
HOH
HOH
489
B
WAT
193
4
HOH
HOH
490
B
WAT
194
4
HOH
HOH
491
B
WAT
195
4
HOH
HOH
492
B
WAT
196
4
HOH
HOH
493
B
WAT
197
4
HOH
HOH
494
B
WAT
198
4
HOH
HOH
495
B
WAT
199
4
HOH
HOH
496
B
WAT
200
4
HOH
HOH
497
B
WAT
201
4
HOH
HOH
498
B
WAT
202
4
HOH
HOH
499
B
WAT
208
4
HOH
HOH
500
B
WAT
214
4
HOH
HOH
501
B
WAT
215
4
HOH
HOH
502
B
WAT
216
4
HOH
HOH
503
B
WAT
220
4
HOH
HOH
504
B
WAT
221
4
HOH
HOH
505
B
WAT
222
4
HOH
HOH
506
B
WAT
223
4
HOH
HOH
507
B
WAT
227
4
HOH
HOH
508
B
WAT
228
4
HOH
HOH
509
B
WAT
229
4
HOH
HOH
510
B
WAT
230
4
HOH
HOH
511
B
WAT
231
4
HOH
HOH
512
B
WAT
232
4
HOH
HOH
513
B
WAT
242
4
HOH
HOH
514
B
WAT
243
4
HOH
HOH
515
B
WAT
244
4
HOH
HOH
516
B
WAT
245
4
HOH
HOH
517
B
WAT
246
4
HOH
HOH
518
B
WAT
247
4
HOH
HOH
519
B
WAT
251
4
HOH
HOH
520
B
WAT
259
4
HOH
HOH
521
B
WAT
260
4
HOH
HOH
522
B
WAT
261
4
HOH
HOH
523
B
WAT
262
4
HOH
HOH
524
B
n
1
-11
A
n
2
-10
A
n
3
-9
A
n
4
-8
A
n
5
-7
A
n
6
-6
A
n
7
-5
A
n
8
-4
A
n
9
-3
A
n
10
-2
A
n
11
-1
A
n
12
0
A
MET
1
n
13
MET
1
A
ALA
2
n
14
ALA
2
A
ILE
3
n
15
ILE
3
A
LEU
4
n
16
LEU
4
A
ASN
5
n
17
ASN
5
A
ILE
6
n
18
ILE
6
A
LEU
7
n
19
LEU
7
A
GLU
8
n
20
GLU
8
A
PHE
9
n
21
PHE
9
A
PRO
10
n
22
PRO
10
A
ASP
11
n
23
ASP
11
A
PRO
12
n
24
PRO
12
A
ARG
13
n
25
ARG
13
A
LEU
14
n
26
LEU
14
A
ARG
15
n
27
ARG
15
A
THR
16
n
28
THR
16
A
ILE
17
n
29
ILE
17
A
ALA
18
n
30
ALA
18
A
LYS
19
n
31
LYS
19
A
PRO
20
n
32
PRO
20
A
VAL
21
n
33
VAL
21
A
GLU
22
n
34
GLU
22
A
VAL
23
n
35
VAL
23
A
VAL
24
n
36
VAL
24
A
ASP
25
n
37
ASP
25
A
ASP
26
n
38
ASP
26
A
ALA
27
n
39
ALA
27
A
VAL
28
n
40
VAL
28
A
ARG
29
n
41
ARG
29
A
GLN
30
n
42
GLN
30
A
LEU
31
n
43
LEU
31
A
ILE
32
n
44
ILE
32
A
ASP
33
n
45
ASP
33
A
ASP
34
n
46
ASP
34
A
MET
35
n
47
MET
35
A
PHE
36
n
48
PHE
36
A
GLU
37
n
49
GLU
37
A
THR
38
n
50
THR
38
A
MET
39
n
51
MET
39
A
TYR
40
n
52
TYR
40
A
GLU
41
n
53
GLU
41
A
ALA
42
n
54
ALA
42
A
PRO
43
n
55
PRO
43
A
GLY
44
n
56
GLY
44
A
ILE
45
n
57
ILE
45
A
GLY
46
n
58
GLY
46
A
LEU
47
n
59
LEU
47
A
ALA
48
n
60
ALA
48
A
ALA
49
n
61
ALA
49
A
THR
50
n
62
THR
50
A
GLN
51
n
63
GLN
51
A
VAL
52
n
64
VAL
52
A
ASN
53
n
65
ASN
53
A
VAL
54
n
66
VAL
54
A
HIS
55
n
67
HIS
55
A
LYS
56
n
68
LYS
56
A
ARG
57
n
69
ARG
57
A
ILE
58
n
70
ILE
58
A
VAL
59
n
71
VAL
59
A
VAL
60
n
72
VAL
60
A
MET
61
n
73
MET
61
A
ASP
62
n
74
ASP
62
A
LEU
63
n
75
LEU
63
A
SER
64
n
76
SER
64
A
GLU
65
n
77
GLU
65
A
ASP
66
n
78
ASP
66
A
LYS
67
n
79
LYS
67
A
SER
68
n
80
SER
68
A
GLU
69
n
81
GLU
69
A
PRO
70
n
82
PRO
70
A
ARG
71
n
83
ARG
71
A
VAL
72
n
84
VAL
72
A
PHE
73
n
85
PHE
73
A
ILE
74
n
86
ILE
74
A
ASN
75
n
87
ASN
75
A
PRO
76
n
88
PRO
76
A
GLU
77
n
89
GLU
77
A
PHE
78
n
90
PHE
78
A
GLU
79
n
91
GLU
79
A
PRO
80
n
92
PRO
80
A
LEU
81
n
93
LEU
81
A
THR
82
n
94
THR
82
A
GLU
83
n
95
GLU
83
A
GLU
84
n
96
GLU
84
A
MET
85
n
97
MET
85
A
ASP
86
n
98
ASP
86
A
GLN
87
n
99
GLN
87
A
TYR
88
n
100
TYR
88
A
GLN
89
n
101
GLN
89
A
GLU
90
n
102
GLU
90
A
GLY
91
n
103
GLY
91
A
CYS
92
n
104
CYS
92
A
LEU
93
n
105
LEU
93
A
SER
94
n
106
SER
94
A
VAL
95
n
107
VAL
95
A
PRO
96
n
108
PRO
96
A
GLY
97
n
109
GLY
97
A
PHE
98
n
110
PHE
98
A
TYR
99
n
111
TYR
99
A
GLU
100
n
112
GLU
100
A
ASN
101
n
113
ASN
101
A
VAL
102
n
114
VAL
102
A
ASP
103
n
115
ASP
103
A
ARG
104
n
116
ARG
104
A
PRO
105
n
117
PRO
105
A
GLN
106
n
118
GLN
106
A
LYS
107
n
119
LYS
107
A
VAL
108
n
120
VAL
108
A
ARG
109
n
121
ARG
109
A
ILE
110
n
122
ILE
110
A
LYS
111
n
123
LYS
111
A
ALA
112
n
124
ALA
112
A
LEU
113
n
125
LEU
113
A
ASP
114
n
126
ASP
114
A
ARG
115
n
127
ARG
115
A
ASP
116
n
128
ASP
116
A
GLY
117
n
129
GLY
117
A
ASN
118
n
130
ASN
118
A
PRO
119
n
131
PRO
119
A
PHE
120
n
132
PHE
120
A
GLU
121
n
133
GLU
121
A
GLU
122
n
134
GLU
122
A
VAL
123
n
135
VAL
123
A
ALA
124
n
136
ALA
124
A
GLU
125
n
137
GLU
125
A
GLY
126
n
138
GLY
126
A
LEU
127
n
139
LEU
127
A
LEU
128
n
140
LEU
128
A
ALA
129
n
141
ALA
129
A
VAL
130
n
142
VAL
130
A
CYS
131
n
143
CYS
131
A
ILE
132
n
144
ILE
132
A
GLN
133
n
145
GLN
133
A
HIS
134
n
146
HIS
134
A
GLU
135
n
147
GLU
135
A
CYS
136
n
148
CYS
136
A
ASP
137
n
149
ASP
137
A
HIS
138
n
150
HIS
138
A
LEU
139
n
151
LEU
139
A
ASN
140
n
152
ASN
140
A
GLY
141
n
153
GLY
141
A
LYS
142
n
154
LYS
142
A
LEU
143
n
155
LEU
143
A
PHE
144
n
156
PHE
144
A
VAL
145
n
157
VAL
145
A
ASP
146
n
158
ASP
146
A
TYR
147
n
159
TYR
147
A
LEU
148
n
160
LEU
148
A
SER
149
n
161
SER
149
A
THR
150
n
162
THR
150
A
LEU
151
n
163
LEU
151
A
LYS
152
n
164
LYS
152
A
ARG
153
n
165
ARG
153
A
ASP
154
n
166
ASP
154
A
ARG
155
n
167
ARG
155
A
ILE
156
n
168
ILE
156
A
ARG
157
n
169
ARG
157
A
LYS
158
n
170
LYS
158
A
LYS
159
n
171
LYS
159
A
LEU
160
n
172
LEU
160
A
GLU
161
n
173
GLU
161
A
LYS
162
n
174
LYS
162
A
GLN
163
n
175
GLN
163
A
HIS
164
n
176
HIS
164
A
ARG
165
n
177
ARG
165
A
GLN
166
n
178
GLN
166
A
GLN
167
n
179
GLN
167
A
n
180
168
A
n
1
-11
B
n
2
-10
B
n
3
-9
B
n
4
-8
B
n
5
-7
B
n
6
-6
B
n
7
-5
B
n
8
-4
B
n
9
-3
B
n
10
-2
B
n
11
-1
B
n
12
0
B
n
13
1
B
ALA
2
n
14
ALA
2
B
ILE
3
n
15
ILE
3
B
LEU
4
n
16
LEU
4
B
ASN
5
n
17
ASN
5
B
ILE
6
n
18
ILE
6
B
LEU
7
n
19
LEU
7
B
GLU
8
n
20
GLU
8
B
PHE
9
n
21
PHE
9
B
PRO
10
n
22
PRO
10
B
ASP
11
n
23
ASP
11
B
PRO
12
n
24
PRO
12
B
ARG
13
n
25
ARG
13
B
LEU
14
n
26
LEU
14
B
ARG
15
n
27
ARG
15
B
THR
16
n
28
THR
16
B
ILE
17
n
29
ILE
17
B
ALA
18
n
30
ALA
18
B
LYS
19
n
31
LYS
19
B
PRO
20
n
32
PRO
20
B
VAL
21
n
33
VAL
21
B
GLU
22
n
34
GLU
22
B
VAL
23
n
35
VAL
23
B
VAL
24
n
36
VAL
24
B
ASP
25
n
37
ASP
25
B
ASP
26
n
38
ASP
26
B
ALA
27
n
39
ALA
27
B
VAL
28
n
40
VAL
28
B
ARG
29
n
41
ARG
29
B
GLN
30
n
42
GLN
30
B
LEU
31
n
43
LEU
31
B
ILE
32
n
44
ILE
32
B
ASP
33
n
45
ASP
33
B
ASP
34
n
46
ASP
34
B
MET
35
n
47
MET
35
B
PHE
36
n
48
PHE
36
B
GLU
37
n
49
GLU
37
B
THR
38
n
50
THR
38
B
MET
39
n
51
MET
39
B
TYR
40
n
52
TYR
40
B
GLU
41
n
53
GLU
41
B
ALA
42
n
54
ALA
42
B
PRO
43
n
55
PRO
43
B
GLY
44
n
56
GLY
44
B
ILE
45
n
57
ILE
45
B
GLY
46
n
58
GLY
46
B
LEU
47
n
59
LEU
47
B
ALA
48
n
60
ALA
48
B
ALA
49
n
61
ALA
49
B
THR
50
n
62
THR
50
B
GLN
51
n
63
GLN
51
B
VAL
52
n
64
VAL
52
B
ASN
53
n
65
ASN
53
B
VAL
54
n
66
VAL
54
B
HIS
55
n
67
HIS
55
B
LYS
56
n
68
LYS
56
B
ARG
57
n
69
ARG
57
B
ILE
58
n
70
ILE
58
B
VAL
59
n
71
VAL
59
B
VAL
60
n
72
VAL
60
B
MET
61
n
73
MET
61
B
ASP
62
n
74
ASP
62
B
LEU
63
n
75
LEU
63
B
SER
64
n
76
SER
64
B
GLU
65
n
77
GLU
65
B
ASP
66
n
78
ASP
66
B
LYS
67
n
79
LYS
67
B
SER
68
n
80
SER
68
B
GLU
69
n
81
GLU
69
B
PRO
70
n
82
PRO
70
B
ARG
71
n
83
ARG
71
B
VAL
72
n
84
VAL
72
B
PHE
73
n
85
PHE
73
B
ILE
74
n
86
ILE
74
B
ASN
75
n
87
ASN
75
B
PRO
76
n
88
PRO
76
B
GLU
77
n
89
GLU
77
B
PHE
78
n
90
PHE
78
B
GLU
79
n
91
GLU
79
B
PRO
80
n
92
PRO
80
B
LEU
81
n
93
LEU
81
B
THR
82
n
94
THR
82
B
GLU
83
n
95
GLU
83
B
GLU
84
n
96
GLU
84
B
MET
85
n
97
MET
85
B
ASP
86
n
98
ASP
86
B
GLN
87
n
99
GLN
87
B
TYR
88
n
100
TYR
88
B
GLN
89
n
101
GLN
89
B
GLU
90
n
102
GLU
90
B
GLY
91
n
103
GLY
91
B
CYS
92
n
104
CYS
92
B
LEU
93
n
105
LEU
93
B
SER
94
n
106
SER
94
B
VAL
95
n
107
VAL
95
B
PRO
96
n
108
PRO
96
B
GLY
97
n
109
GLY
97
B
PHE
98
n
110
PHE
98
B
TYR
99
n
111
TYR
99
B
GLU
100
n
112
GLU
100
B
ASN
101
n
113
ASN
101
B
VAL
102
n
114
VAL
102
B
ASP
103
n
115
ASP
103
B
ARG
104
n
116
ARG
104
B
PRO
105
n
117
PRO
105
B
GLN
106
n
118
GLN
106
B
LYS
107
n
119
LYS
107
B
VAL
108
n
120
VAL
108
B
ARG
109
n
121
ARG
109
B
ILE
110
n
122
ILE
110
B
LYS
111
n
123
LYS
111
B
ALA
112
n
124
ALA
112
B
LEU
113
n
125
LEU
113
B
ASP
114
n
126
ASP
114
B
ARG
115
n
127
ARG
115
B
ASP
116
n
128
ASP
116
B
GLY
117
n
129
GLY
117
B
ASN
118
n
130
ASN
118
B
PRO
119
n
131
PRO
119
B
PHE
120
n
132
PHE
120
B
GLU
121
n
133
GLU
121
B
GLU
122
n
134
GLU
122
B
VAL
123
n
135
VAL
123
B
ALA
124
n
136
ALA
124
B
GLU
125
n
137
GLU
125
B
GLY
126
n
138
GLY
126
B
LEU
127
n
139
LEU
127
B
LEU
128
n
140
LEU
128
B
ALA
129
n
141
ALA
129
B
VAL
130
n
142
VAL
130
B
CYS
131
n
143
CYS
131
B
ILE
132
n
144
ILE
132
B
GLN
133
n
145
GLN
133
B
HIS
134
n
146
HIS
134
B
GLU
135
n
147
GLU
135
B
CYS
136
n
148
CYS
136
B
ASP
137
n
149
ASP
137
B
HIS
138
n
150
HIS
138
B
LEU
139
n
151
LEU
139
B
ASN
140
n
152
ASN
140
B
GLY
141
n
153
GLY
141
B
LYS
142
n
154
LYS
142
B
LEU
143
n
155
LEU
143
B
PHE
144
n
156
PHE
144
B
VAL
145
n
157
VAL
145
B
ASP
146
n
158
ASP
146
B
TYR
147
n
159
TYR
147
B
LEU
148
n
160
LEU
148
B
SER
149
n
161
SER
149
B
THR
150
n
162
THR
150
B
LEU
151
n
163
LEU
151
B
LYS
152
n
164
LYS
152
B
ARG
153
n
165
ARG
153
B
ASP
154
n
166
ASP
154
B
ARG
155
n
167
ARG
155
B
ILE
156
n
168
ILE
156
B
ARG
157
n
169
ARG
157
B
LYS
158
n
170
LYS
158
B
LYS
159
n
171
LYS
159
B
LEU
160
n
172
LEU
160
B
GLU
161
n
173
GLU
161
B
LYS
162
n
174
LYS
162
B
GLN
163
n
175
GLN
163
B
HIS
164
n
176
HIS
164
B
ARG
165
n
177
ARG
165
B
n
178
166
B
n
179
167
B
n
180
168
B
author_defined_assembly
1
monomeric
author_defined_assembly
1
monomeric
A
CYS
92
A
SG
CYS
104
1_555
A
ZN
401
C
ZN
ZN
1_555
A
HIS
134
A
NE2
HIS
146
1_555
116.3
A
CYS
92
A
SG
CYS
104
1_555
A
ZN
401
C
ZN
ZN
1_555
A
HIS
138
A
NE2
HIS
150
1_555
100.1
A
HIS
134
A
NE2
HIS
146
1_555
A
ZN
401
C
ZN
ZN
1_555
A
HIS
138
A
NE2
HIS
150
1_555
109.6
A
CYS
92
A
SG
CYS
104
1_555
A
ZN
401
C
ZN
ZN
1_555
A
HOH
402
H
O
HOH
1_555
109.3
A
HIS
134
A
NE2
HIS
146
1_555
A
ZN
401
C
ZN
ZN
1_555
A
HOH
402
H
O
HOH
1_555
103.5
A
HIS
138
A
NE2
HIS
150
1_555
A
ZN
401
C
ZN
ZN
1_555
A
HOH
402
H
O
HOH
1_555
118.7
B
CYS
92
B
SG
CYS
104
1_555
B
ZN
402
F
ZN
ZN
1_555
B
HIS
134
B
NE2
HIS
146
1_555
117.5
B
CYS
92
B
SG
CYS
104
1_555
B
ZN
402
F
ZN
ZN
1_555
B
HIS
138
B
NE2
HIS
150
1_555
101.3
B
HIS
134
B
NE2
HIS
146
1_555
B
ZN
402
F
ZN
ZN
1_555
B
HIS
138
B
NE2
HIS
150
1_555
110.0
B
CYS
92
B
SG
CYS
104
1_555
B
ZN
402
F
ZN
ZN
1_555
B
HOH
403
I
O
HOH
1_555
108.5
B
HIS
134
B
NE2
HIS
146
1_555
B
ZN
402
F
ZN
ZN
1_555
B
HOH
403
I
O
HOH
1_555
101.4
B
HIS
138
B
NE2
HIS
150
1_555
B
ZN
402
F
ZN
ZN
1_555
B
HOH
403
I
O
HOH
1_555
119.1
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LEU
47
A
N
LEU
59
A
O
VAL
60
A
O
VAL
72
A
N
VAL
59
A
N
VAL
71
A
O
PHE
73
A
O
PHE
85
A
N
ILE
74
A
N
ILE
86
A
O
LEU
113
A
O
LEU
125
A
N
VAL
108
A
N
VAL
120
A
O
ALA
124
A
O
ALA
136
A
N
ASP
86
A
N
ASP
98
A
O
ARG
104
A
O
ARG
116
B
N
LEU
47
B
N
LEU
59
B
O
VAL
60
B
O
VAL
72
B
N
VAL
59
B
N
VAL
71
B
O
PHE
73
B
O
PHE
85
B
N
ILE
74
B
N
ILE
86
B
O
LEU
113
B
O
LEU
125
B
N
VAL
108
B
N
VAL
120
B
O
ALA
124
B
O
ALA
136
B
N
GLU
90
B
N
GLU
102
B
O
GLU
100
B
O
GLU
112
1
A
CG
MET
1
A
CG
MET
13
1
Y
1
A
SD
MET
1
A
SD
MET
13
1
Y
1
A
CE
MET
1
A
CE
MET
13
1
Y
1
A
CG
GLN
167
A
CG
GLN
179
1
Y
1
A
CD
GLN
167
A
CD
GLN
179
1
Y
1
A
OE1
GLN
167
A
OE1
GLN
179
1
Y
1
A
NE2
GLN
167
A
NE2
GLN
179
1
Y
1
A
MET
-11
A
MET
1
1
Y
1
A
GLY
-10
A
GLY
2
1
Y
1
A
SER
-9
A
SER
3
1
Y
1
A
ASP
-8
A
ASP
4
1
Y
1
A
LYS
-7
A
LYS
5
1
Y
1
A
ILE
-6
A
ILE
6
1
Y
1
A
HIS
-5
A
HIS
7
1
Y
1
A
HIS
-4
A
HIS
8
1
Y
1
A
HIS
-3
A
HIS
9
1
Y
1
A
HIS
-2
A
HIS
10
1
Y
1
A
HIS
-1
A
HIS
11
1
Y
1
A
HIS
0
A
HIS
12
1
Y
1
A
ALA
168
A
ALA
180
1
Y
1
B
MET
-11
B
MET
1
1
Y
1
B
GLY
-10
B
GLY
2
1
Y
1
B
SER
-9
B
SER
3
1
Y
1
B
ASP
-8
B
ASP
4
1
Y
1
B
LYS
-7
B
LYS
5
1
Y
1
B
ILE
-6
B
ILE
6
1
Y
1
B
HIS
-5
B
HIS
7
1
Y
1
B
HIS
-4
B
HIS
8
1
Y
1
B
HIS
-3
B
HIS
9
1
Y
1
B
HIS
-2
B
HIS
10
1
Y
1
B
HIS
-1
B
HIS
11
1
Y
1
B
HIS
0
B
HIS
12
1
Y
1
B
MET
1
B
MET
13
1
Y
1
B
GLN
166
B
GLN
178
1
Y
1
B
GLN
167
B
GLN
179
1
Y
1
B
ALA
168
B
ALA
180
1
Y
1
B
B
O
O
HOH
HOH
403
506
1.72
1
A
A
O
O
HOH
HOH
439
535
1.85
1
B
B
O
O
HOH
HOH
429
521
1.93
1
A
B
O
O
HOH
HOH
512
500
1.96
1
A
A
O
O
HOH
HOH
423
537
1.97
1
B
B
O
O
VAL
HOH
102
496
2.00
1
B
B
O
O
HOH
HOH
478
495
2.08
1
B
B
O
O
TYR
HOH
88
518
2.10
1
A
A
OD2
O
ASP
HOH
26
437
2.17
1
A
A
OE1
O
GLU
HOH
69
503
2.17
1
A
A
O3
O
GOL
HOH
301
528
2.18
1
-3.55
0.50
120.30
116.75
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
13
13
13
N
1
-5.90
0.90
118.30
112.40
A
A
A
CB
CG
OD2
ASP
ASP
ASP
26
26
26
N
1
9.96
1.60
100.20
110.16
A
A
A
CG
SD
CE
MET
MET
MET
61
61
61
N
1
5.81
0.90
118.30
124.11
A
A
A
CB
CG
OD1
ASP
ASP
ASP
66
66
66
N
1
-4.47
0.50
120.30
115.83
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
71
71
71
N
1
-4.06
0.50
120.30
116.24
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
104
104
104
N
1
3.09
0.50
120.30
123.39
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
153
153
153
N
1
-7.67
0.90
118.30
110.63
A
A
A
CB
CG
OD1
ASP
ASP
ASP
154
154
154
N
1
7.39
0.90
118.30
125.69
A
A
A
CB
CG
OD2
ASP
ASP
ASP
154
154
154
N
1
-3.36
0.50
120.30
116.94
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
157
157
157
N
1
-6.98
0.50
120.30
113.32
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
165
165
165
N
1
-12.34
1.70
111.00
98.66
B
B
B
CB
CG
CD2
LEU
LEU
LEU
4
4
4
N
1
5.49
0.90
118.30
123.79
B
B
B
CB
CG
OD1
ASP
ASP
ASP
11
11
11
N
1
-9.11
1.50
119.30
110.19
B
B
B
C
N
CA
ASP
PRO
PRO
11
12
12
Y
1
-22.05
2.70
111.00
88.95
B
B
B
N
CA
C
TYR
TYR
TYR
88
88
88
N
1
12.18
1.90
111.40
123.58
B
B
B
CB
CA
C
VAL
VAL
VAL
102
102
102
N
1
-16.43
2.70
111.00
94.57
B
B
B
N
CA
C
VAL
VAL
VAL
102
102
102
N
1
3.77
0.50
120.30
124.07
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
104
104
104
N
1
-3.56
0.50
120.30
116.74
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
104
104
104
N
1
4.12
0.50
120.30
124.42
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
109
109
109
N
1
-4.59
0.50
120.30
115.71
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
109
109
109
N
1
-10.68
1.70
111.00
100.32
B
B
B
CB
CG
CD1
LEU
LEU
LEU
113
113
113
N
1
6.95
0.90
118.30
125.25
B
B
B
CB
CG
OD2
ASP
ASP
ASP
146
146
146
N
1
9.54
1.40
123.60
133.14
B
B
B
CD
NE
CZ
ARG
ARG
ARG
157
157
157
N
1
10.01
0.50
120.30
130.31
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
157
157
157
N
1
-10.91
0.50
120.30
109.39
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
157
157
157
N
1
-3.32
0.50
120.30
116.98
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
165
165
165
N
1
A
A
CA
CB
ALA
ALA
48
48
0.140
0.021
1.520
1.660
N
1
A
A
CB
CG1
VAL
VAL
52
52
0.145
0.021
1.524
1.669
N
1
A
A
CD1
CE1
PHE
PHE
73
73
0.137
0.020
1.388
1.525
N
1
A
A
CG
CD1
PHE
PHE
78
78
0.092
0.015
1.383
1.475
N
1
A
A
CZ
CE2
PHE
PHE
78
78
0.145
0.019
1.369
1.514
N
1
A
A
CG
CD
GLU
GLU
83
83
0.113
0.015
1.515
1.628
N
1
A
A
CD1
CE1
TYR
TYR
88
88
0.113
0.015
1.389
1.502
N
1
A
A
CB
CG
GLU
GLU
90
90
-0.127
0.019
1.517
1.390
N
1
A
A
CG
CD
GLU
GLU
90
90
0.159
0.015
1.515
1.674
N
1
A
A
CD1
CE1
TYR
TYR
99
99
0.098
0.015
1.389
1.487
N
1
A
A
CE1
CZ
PHE
PHE
120
120
0.176
0.019
1.369
1.545
N
1
A
A
CB
SG
CYS
CYS
131
131
0.105
0.017
1.818
1.923
N
1
A
A
CE2
CD2
PHE
PHE
144
144
0.139
0.020
1.388
1.527
N
1
A
A
CG
CD
ARG
ARG
155
155
0.152
0.025
1.515
1.667
N
1
B
B
CE2
CD2
PHE
PHE
9
9
0.127
0.020
1.388
1.515
N
1
B
B
CB
CG1
VAL
VAL
28
28
0.131
0.021
1.524
1.655
N
1
B
B
CG
CD
GLU
GLU
37
37
0.143
0.015
1.515
1.658
N
1
B
B
CG
CD
GLU
GLU
79
79
0.092
0.015
1.515
1.607
N
1
B
B
CG
SD
MET
MET
85
85
0.170
0.026
1.807
1.977
N
1
B
B
CD
OE2
GLU
GLU
100
100
0.067
0.011
1.252
1.319
N
1
B
B
CZ
NH1
ARG
ARG
157
157
0.088
0.013
1.326
1.414
N
1
A
ASP
62
-160.39
106.32
1
B
PRO
10
-91.75
32.27
1
B
ASP
66
-140.71
25.46
25
3.53
0
0
-4.73
0
1.2
0.244
0.196
1.8
41.87
1790
36428
35997
99.1
random
1
isotropic
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
PDB Entry 1BS4
Engh & Huber
0.27
0.21
5.0
0.26
0.22
1.8
41.87
262
2957
20
0
2675
0.044
3.2
24.5
2.53
0.395
0.023
0.339
1.91
303
5506
97.9
19.4
1.8
41.87
1N5N
36473
36428
0
2
0.083
1
12
26
1.8
1.83
1791
0.341
1
100
data collection
HKL-2000
data scaling
SCALEPACK
phasing
AMoRE
refinement
CNS
data reduction
HKL-2000
Crystal Structure of Peptide Deformylase from Pseudomonas aeruginosa
1
N
N
1
N
N
2
N
N
3
N
N
3
N
N
2
N
N
3
N
N
4
N
N
4
N
N
A
ASP
11
A
ASP
23
HELX_P
A
THR
16
A
THR
28
5
1
6
A
ASP
25
A
ASP
37
HELX_P
A
ALA
42
A
ALA
54
1
2
18
A
THR
50
A
THR
62
HELX_P
A
ASN
53
A
ASN
65
5
3
4
A
GLU
125
A
GLU
137
HELX_P
A
ASN
140
A
ASN
152
1
4
16
A
LEU
143
A
LEU
155
HELX_P
A
LEU
148
A
LEU
160
5
5
6
A
SER
149
A
SER
161
HELX_P
A
GLN
167
A
GLN
179
1
6
19
B
ASP
11
B
ASP
23
HELX_P
B
THR
16
B
THR
28
5
7
6
B
ASP
25
B
ASP
37
HELX_P
B
ALA
42
B
ALA
54
1
8
18
B
THR
50
B
THR
62
HELX_P
B
ASN
53
B
ASN
65
5
9
4
B
GLY
126
B
GLY
138
HELX_P
B
ASN
140
B
ASN
152
1
10
15
B
LEU
143
B
LEU
155
HELX_P
B
LEU
148
B
LEU
160
5
11
6
B
SER
149
B
SER
161
HELX_P
B
ARG
165
B
ARG
177
1
12
17
metalc
2.258
A
CYS
92
A
SG
CYS
104
1_555
A
ZN
401
C
ZN
ZN
1_555
metalc
1.958
A
HIS
134
A
NE2
HIS
146
1_555
A
ZN
401
C
ZN
ZN
1_555
metalc
2.041
A
HIS
138
A
NE2
HIS
150
1_555
A
ZN
401
C
ZN
ZN
1_555
metalc
2.220
A
ZN
401
C
ZN
ZN
1_555
A
HOH
402
H
O
HOH
1_555
metalc
2.261
B
CYS
92
B
SG
CYS
104
1_555
B
ZN
402
F
ZN
ZN
1_555
metalc
2.037
B
HIS
134
B
NE2
HIS
146
1_555
B
ZN
402
F
ZN
ZN
1_555
metalc
2.007
B
HIS
138
B
NE2
HIS
150
1_555
B
ZN
402
F
ZN
ZN
1_555
metalc
2.158
B
ZN
402
F
ZN
ZN
1_555
B
HOH
403
I
O
HOH
1_555
HYDROLASE
metalloenzyme, drug design, deformylation, HYDROLASE
A
PHE
9
A
PHE
21
1
A
PRO
10
A
PRO
22
1.27
A
ALA
42
A
ALA
54
1
A
PRO
43
A
PRO
55
-0.74
B
PHE
9
B
PHE
21
1
B
PRO
10
B
PRO
22
0.48
B
ALA
42
B
ALA
54
1
B
PRO
43
B
PRO
55
-0.90
DEF_PSEAE
UNP
1
1
Q9I7A8
MAILNILEFPDPRLRTIAKPVEVVDDAVRQLIDDMFETMYEAPGIGLAATQVNVHKRIVVMDLSEDKSEPRVFINPEFEP
LTEDMDQYQEGCLSVPGFYENVDRPQKVRIKALDRDGNPFEEVAEGLLAVCIQHECDHLNGKLFVDYLSTLKRDRIRKKL
EKQHRQQA
1
168
1N5N
1
168
Q9I7A8
A
1
13
180
1
168
1N5N
1
168
Q9I7A8
B
1
13
180
1
expression tag
MET
-11
1N5N
A
Q9I7A8
UNP
1
1
expression tag
GLY
-10
1N5N
A
Q9I7A8
UNP
2
1
expression tag
SER
-9
1N5N
A
Q9I7A8
UNP
3
1
expression tag
ASP
-8
1N5N
A
Q9I7A8
UNP
4
1
expression tag
LYS
-7
1N5N
A
Q9I7A8
UNP
5
1
expression tag
ILE
-6
1N5N
A
Q9I7A8
UNP
6
1
expression tag
HIS
-5
1N5N
A
Q9I7A8
UNP
7
1
expression tag
HIS
-4
1N5N
A
Q9I7A8
UNP
8
1
expression tag
HIS
-3
1N5N
A
Q9I7A8
UNP
9
1
expression tag
HIS
-2
1N5N
A
Q9I7A8
UNP
10
1
expression tag
HIS
-1
1N5N
A
Q9I7A8
UNP
11
1
expression tag
HIS
0
1N5N
A
Q9I7A8
UNP
12
1
ASP
engineered mutation
GLU
84
1N5N
A
Q9I7A8
UNP
84
96
2
expression tag
MET
-11
1N5N
B
Q9I7A8
UNP
1
2
expression tag
GLY
-10
1N5N
B
Q9I7A8
UNP
2
2
expression tag
SER
-9
1N5N
B
Q9I7A8
UNP
3
2
expression tag
ASP
-8
1N5N
B
Q9I7A8
UNP
4
2
expression tag
LYS
-7
1N5N
B
Q9I7A8
UNP
5
2
expression tag
ILE
-6
1N5N
B
Q9I7A8
UNP
6
2
expression tag
HIS
-5
1N5N
B
Q9I7A8
UNP
7
2
expression tag
HIS
-4
1N5N
B
Q9I7A8
UNP
8
2
expression tag
HIS
-3
1N5N
B
Q9I7A8
UNP
9
2
expression tag
HIS
-2
1N5N
B
Q9I7A8
UNP
10
2
expression tag
HIS
-1
1N5N
B
Q9I7A8
UNP
11
2
expression tag
HIS
0
1N5N
B
Q9I7A8
UNP
12
2
ASP
engineered mutation
GLU
84
1N5N
B
Q9I7A8
UNP
84
96
5
2
5
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLY
46
A
GLY
58
A
ALA
48
A
ALA
60
A
ILE
58
A
ILE
70
A
ASP
62
A
ASP
74
A
PRO
70
A
PRO
82
A
PRO
80
A
PRO
92
A
VAL
108
A
VAL
120
A
LEU
113
A
LEU
125
A
PRO
119
A
PRO
131
A
ALA
124
A
ALA
136
A
MET
85
A
MET
97
A
GLU
90
A
GLU
102
A
GLU
100
A
GLU
112
A
PRO
105
A
PRO
117
B
GLY
46
B
GLY
58
B
ALA
48
B
ALA
60
B
ILE
58
B
ILE
70
B
ASP
62
B
ASP
74
B
PRO
70
B
PRO
82
B
PRO
80
B
PRO
92
B
LYS
107
B
LYS
119
B
LEU
113
B
LEU
125
B
PRO
119
B
PRO
131
B
GLU
125
B
GLU
137
B
GLN
89
B
GLN
101
B
GLU
90
B
GLU
102
B
GLU
100
B
GLU
112
B
ASN
101
B
ASN
113
BINDING SITE FOR RESIDUE ZN A 401
A
ZN
401
Software
5
BINDING SITE FOR RESIDUE ZN B 402
B
ZN
402
Software
5
BINDING SITE FOR RESIDUE GOL A 301
A
GOL
301
Software
7
BINDING SITE FOR RESIDUE GOL B 302
B
GOL
302
Software
7
BINDING SITE FOR RESIDUE GOL A 303
A
GOL
303
Software
7
A
GLN
51
A
GLN
63
5
1_555
A
CYS
92
A
CYS
104
5
1_555
A
HIS
134
A
HIS
146
5
1_555
A
HIS
138
A
HIS
150
5
1_555
A
HOH
402
H
HOH
5
1_555
B
GLN
51
B
GLN
63
5
1_555
B
CYS
92
B
CYS
104
5
1_555
B
HIS
134
B
HIS
146
5
1_555
B
HIS
138
B
HIS
150
5
1_555
B
HOH
403
I
HOH
5
1_555
A
TYR
88
A
TYR
100
7
1_555
A
GLU
90
A
GLU
102
7
1_555
A
GLY
91
A
GLY
103
7
1_555
A
CYS
131
A
CYS
143
7
1_555
A
HIS
134
A
HIS
146
7
1_555
A
GOL
303
E
GOL
7
1_555
A
HOH
528
H
HOH
7
1_555
B
GLU
90
B
GLU
102
7
1_555
B
GLY
91
B
GLY
103
7
1_555
B
CYS
131
B
CYS
143
7
1_555
B
GLU
135
B
GLU
147
7
1_555
B
HOH
473
I
HOH
7
1_555
B
HOH
511
I
HOH
7
1_555
B
HOH
517
I
HOH
7
1_555
A
GLY
44
A
GLY
56
7
1_555
A
ILE
45
A
ILE
57
7
1_555
A
GLY
46
A
GLY
58
7
1_555
A
GLY
91
A
GLY
103
7
1_555
A
CYS
92
A
CYS
104
7
1_555
A
LEU
93
A
LEU
105
7
1_555
A
GOL
301
D
GOL
7
1_555
19
P 21 21 21