0.008490
0.004902
0.000000
0.000000
0.009803
0.000000
0.000000
0.000000
0.009806
0.00000
0.00000
0.00000
Im, Y.J.
Park, S.H.
Rho, S.H.
Lee, J.H.
Kang, G.B.
Sheng, M.
Kim, E.
Eom, S.H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
36
90.00
90.00
120.00
117.790
117.790
101.974
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
C
Y
330
N
C
Y
331
N
C
N
332
N
O
N
333
N
O
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
N
N
346
S
C
N
347
N
C
N
348
N
O
N
349
N
C
N
350
N
C
N
351
N
C
N
352
N
O
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
N
322
N
sing
Y
323
N
doub
N
324
N
sing
Y
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
doub
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
US
J.BIOL.CHEM.
JBCHA3
0071
0021-9258
278
8501
8507
10.1074/jbc.M212263200
12493751
Crystal structure of GRIP1 PDZ6-peptide complex reveals the structural basis for class II PDZ target recognition and PDZ domain-mediated multimerization
2003
10.2210/pdb1n7f/pdb
pdb_00001n7f
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
110
1
CCD
2000-12-13
ADSC QUANTUM 4
Si 111 CHANNEL
SINGLE WAVELENGTH
M
x-ray
1
1.00
1.0
BL-18B
Photon Factory
1.00
SYNCHROTRON
PHOTON FACTORY BEAMLINE BL-18B
10142.639
AMPA receptor interacting protein GRIP
sixth PDZ domain
2
man
polymer
901.020
8-mer peptide from interacting protein (liprin)
2
syn
polymer
18.015
water
236
nat
water
glutamate receptor interacting protein 1
no
no
SSGAIIYTVELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGE
TVTLKIKKQTDAQPASS
SSGAIIYTVELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGE
TVTLKIKKQTDAQPASS
A,B
polypeptide(L)
no
no
ATVRTYSC
ATVRTYSC
C,D
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Norway rat
Rattus
Escherichia
Escherichia coli
sample
grip1
10116
Rattus norvegicus
469008
Escherichia coli BL21(DE3)
BL21(DE3)
Plasmid
pGEX-4T
1
2.96
58.09
VAPOR DIFFUSION, HANGING DROP
5.5
PEG400, MPD, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
1
0
2003-08-12
1
1
2008-04-28
1
2
2011-07-13
1
3
2024-03-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
the sixth PDZ domain of GRIP1
RCSB
Y
PDBJ
2002-11-14
REL
REL
HOH
water
The sequence of this chemically synthetized octa peptide occurs in the C-termiuns of human liprin alpha protein
sample
TIP
1
3
HOH
HOH
1
A
TIP
2
3
HOH
HOH
2
A
TIP
3
3
HOH
HOH
3
A
TIP
4
3
HOH
HOH
4
A
TIP
6
3
HOH
HOH
6
A
TIP
9
3
HOH
HOH
9
A
TIP
14
3
HOH
HOH
14
A
TIP
15
3
HOH
HOH
15
A
TIP
16
3
HOH
HOH
16
A
TIP
17
3
HOH
HOH
17
A
TIP
19
3
HOH
HOH
19
A
TIP
20
3
HOH
HOH
20
A
TIP
21
3
HOH
HOH
21
A
TIP
24
3
HOH
HOH
24
A
TIP
25
3
HOH
HOH
25
A
TIP
27
3
HOH
HOH
27
A
TIP
28
3
HOH
HOH
28
A
TIP
38
3
HOH
HOH
38
A
TIP
39
3
HOH
HOH
39
A
TIP
40
3
HOH
HOH
40
A
TIP
41
3
HOH
HOH
41
A
TIP
42
3
HOH
HOH
42
A
TIP
46
3
HOH
HOH
46
A
TIP
49
3
HOH
HOH
49
A
TIP
53
3
HOH
HOH
53
A
TIP
56
3
HOH
HOH
56
A
TIP
59
3
HOH
HOH
59
A
TIP
60
3
HOH
HOH
60
A
TIP
61
3
HOH
HOH
61
A
TIP
63
3
HOH
HOH
63
A
TIP
65
3
HOH
HOH
65
A
TIP
66
3
HOH
HOH
66
A
TIP
67
3
HOH
HOH
67
A
TIP
68
3
HOH
HOH
68
A
TIP
69
3
HOH
HOH
69
A
TIP
70
3
HOH
HOH
70
A
TIP
73
3
HOH
HOH
73
A
TIP
75
3
HOH
HOH
75
A
TIP
77
3
HOH
HOH
77
A
TIP
78
3
HOH
HOH
78
A
TIP
81
3
HOH
HOH
81
A
TIP
82
3
HOH
HOH
82
A
TIP
83
3
HOH
HOH
83
A
TIP
84
3
HOH
HOH
84
A
TIP
85
3
HOH
HOH
85
A
TIP
87
3
HOH
HOH
87
A
TIP
88
3
HOH
HOH
88
A
TIP
89
3
HOH
HOH
89
A
TIP
91
3
HOH
HOH
91
A
TIP
93
3
HOH
HOH
93
A
TIP
97
3
HOH
HOH
97
A
TIP
98
3
HOH
HOH
98
A
TIP
100
3
HOH
HOH
100
A
TIP
102
3
HOH
HOH
102
A
TIP
103
3
HOH
HOH
103
A
TIP
104
3
HOH
HOH
104
A
TIP
106
3
HOH
HOH
106
A
TIP
107
3
HOH
HOH
107
A
TIP
109
3
HOH
HOH
109
A
TIP
113
3
HOH
HOH
113
A
TIP
115
3
HOH
HOH
115
A
TIP
116
3
HOH
HOH
116
A
TIP
119
3
HOH
HOH
119
A
TIP
132
3
HOH
HOH
132
A
TIP
134
3
HOH
HOH
134
A
TIP
135
3
HOH
HOH
135
A
TIP
136
3
HOH
HOH
136
A
TIP
137
3
HOH
HOH
137
A
TIP
138
3
HOH
HOH
138
A
TIP
139
3
HOH
HOH
139
A
TIP
140
3
HOH
HOH
140
A
TIP
143
3
HOH
HOH
143
A
TIP
144
3
HOH
HOH
144
A
TIP
149
3
HOH
HOH
149
A
TIP
151
3
HOH
HOH
151
A
TIP
153
3
HOH
HOH
153
A
TIP
156
3
HOH
HOH
156
A
TIP
157
3
HOH
HOH
157
A
TIP
159
3
HOH
HOH
159
A
TIP
162
3
HOH
HOH
162
A
TIP
164
3
HOH
HOH
164
A
TIP
165
3
HOH
HOH
165
A
TIP
166
3
HOH
HOH
166
A
TIP
172
3
HOH
HOH
172
A
TIP
175
3
HOH
HOH
175
A
TIP
180
3
HOH
HOH
180
A
TIP
185
3
HOH
HOH
185
A
TIP
187
3
HOH
HOH
187
A
TIP
194
3
HOH
HOH
194
A
TIP
198
3
HOH
HOH
198
A
TIP
200
3
HOH
HOH
200
A
TIP
201
3
HOH
HOH
201
A
TIP
204
3
HOH
HOH
204
A
TIP
205
3
HOH
HOH
205
A
TIP
209
3
HOH
HOH
209
A
TIP
210
3
HOH
HOH
210
A
TIP
211
3
HOH
HOH
211
A
TIP
214
3
HOH
HOH
214
A
TIP
216
3
HOH
HOH
216
A
TIP
219
3
HOH
HOH
219
A
TIP
222
3
HOH
HOH
222
A
TIP
223
3
HOH
HOH
223
A
TIP
226
3
HOH
HOH
226
A
TIP
227
3
HOH
HOH
227
A
TIP
235
3
HOH
HOH
235
A
TIP
236
3
HOH
HOH
236
A
TIP
7
3
HOH
HOH
7
B
TIP
8
3
HOH
HOH
8
B
TIP
11
3
HOH
HOH
11
B
TIP
13
3
HOH
HOH
13
B
TIP
22
3
HOH
HOH
22
B
TIP
26
3
HOH
HOH
26
B
TIP
29
3
HOH
HOH
29
B
TIP
30
3
HOH
HOH
30
B
TIP
31
3
HOH
HOH
31
B
TIP
32
3
HOH
HOH
32
B
TIP
34
3
HOH
HOH
34
B
TIP
37
3
HOH
HOH
37
B
TIP
44
3
HOH
HOH
44
B
TIP
45
3
HOH
HOH
45
B
TIP
48
3
HOH
HOH
48
B
TIP
50
3
HOH
HOH
50
B
TIP
52
3
HOH
HOH
52
B
TIP
54
3
HOH
HOH
54
B
TIP
55
3
HOH
HOH
55
B
TIP
62
3
HOH
HOH
62
B
TIP
74
3
HOH
HOH
74
B
TIP
76
3
HOH
HOH
76
B
TIP
79
3
HOH
HOH
79
B
TIP
80
3
HOH
HOH
80
B
TIP
90
3
HOH
HOH
90
B
TIP
92
3
HOH
HOH
92
B
TIP
94
3
HOH
HOH
94
B
TIP
96
3
HOH
HOH
96
B
TIP
99
3
HOH
HOH
99
B
TIP
105
3
HOH
HOH
105
B
TIP
108
3
HOH
HOH
108
B
TIP
110
3
HOH
HOH
110
B
TIP
111
3
HOH
HOH
111
B
TIP
112
3
HOH
HOH
112
B
TIP
114
3
HOH
HOH
114
B
TIP
117
3
HOH
HOH
117
B
TIP
120
3
HOH
HOH
120
B
TIP
121
3
HOH
HOH
121
B
TIP
123
3
HOH
HOH
123
B
TIP
125
3
HOH
HOH
125
B
TIP
126
3
HOH
HOH
126
B
TIP
128
3
HOH
HOH
128
B
TIP
129
3
HOH
HOH
129
B
TIP
131
3
HOH
HOH
131
B
TIP
133
3
HOH
HOH
133
B
TIP
141
3
HOH
HOH
141
B
TIP
142
3
HOH
HOH
142
B
TIP
145
3
HOH
HOH
145
B
TIP
146
3
HOH
HOH
146
B
TIP
147
3
HOH
HOH
147
B
TIP
148
3
HOH
HOH
148
B
TIP
150
3
HOH
HOH
150
B
TIP
152
3
HOH
HOH
152
B
TIP
158
3
HOH
HOH
158
B
TIP
160
3
HOH
HOH
160
B
TIP
161
3
HOH
HOH
161
B
TIP
163
3
HOH
HOH
163
B
TIP
167
3
HOH
HOH
167
B
TIP
169
3
HOH
HOH
169
B
TIP
170
3
HOH
HOH
170
B
TIP
174
3
HOH
HOH
174
B
TIP
178
3
HOH
HOH
178
B
TIP
182
3
HOH
HOH
182
B
TIP
184
3
HOH
HOH
184
B
TIP
186
3
HOH
HOH
186
B
TIP
188
3
HOH
HOH
188
B
TIP
189
3
HOH
HOH
189
B
TIP
190
3
HOH
HOH
190
B
TIP
191
3
HOH
HOH
191
B
TIP
192
3
HOH
HOH
192
B
TIP
197
3
HOH
HOH
197
B
TIP
199
3
HOH
HOH
199
B
TIP
202
3
HOH
HOH
202
B
TIP
206
3
HOH
HOH
206
B
TIP
207
3
HOH
HOH
207
B
TIP
208
3
HOH
HOH
208
B
TIP
212
3
HOH
HOH
212
B
TIP
213
3
HOH
HOH
213
B
TIP
215
3
HOH
HOH
215
B
TIP
217
3
HOH
HOH
217
B
TIP
220
3
HOH
HOH
220
B
TIP
221
3
HOH
HOH
221
B
TIP
224
3
HOH
HOH
224
B
TIP
228
3
HOH
HOH
228
B
TIP
229
3
HOH
HOH
229
B
TIP
230
3
HOH
HOH
230
B
TIP
231
3
HOH
HOH
231
B
TIP
232
3
HOH
HOH
232
B
TIP
233
3
HOH
HOH
233
B
TIP
234
3
HOH
HOH
234
B
TIP
237
3
HOH
HOH
237
B
TIP
239
3
HOH
HOH
239
B
TIP
240
3
HOH
HOH
240
B
TIP
5
3
HOH
HOH
9
C
TIP
10
3
HOH
HOH
10
C
TIP
12
3
HOH
HOH
11
C
TIP
18
3
HOH
HOH
12
C
TIP
23
3
HOH
HOH
13
C
TIP
35
3
HOH
HOH
14
C
TIP
36
3
HOH
HOH
15
C
TIP
64
3
HOH
HOH
16
C
TIP
86
3
HOH
HOH
17
C
TIP
118
3
HOH
HOH
18
C
TIP
124
3
HOH
HOH
19
C
TIP
154
3
HOH
HOH
20
C
TIP
171
3
HOH
HOH
21
C
TIP
173
3
HOH
HOH
22
C
TIP
176
3
HOH
HOH
23
C
TIP
179
3
HOH
HOH
24
C
TIP
193
3
HOH
HOH
25
C
TIP
195
3
HOH
HOH
26
C
TIP
196
3
HOH
HOH
27
C
TIP
203
3
HOH
HOH
28
C
TIP
47
3
HOH
HOH
47
D
TIP
51
3
HOH
HOH
51
D
TIP
57
3
HOH
HOH
57
D
TIP
58
3
HOH
HOH
58
D
TIP
71
3
HOH
HOH
71
D
TIP
72
3
HOH
HOH
72
D
TIP
95
3
HOH
HOH
95
D
TIP
101
3
HOH
HOH
101
D
TIP
122
3
HOH
HOH
122
D
TIP
130
3
HOH
HOH
130
D
TIP
155
3
HOH
HOH
155
D
TIP
177
3
HOH
HOH
177
D
TIP
181
3
HOH
HOH
181
D
TIP
183
3
HOH
HOH
183
D
TIP
218
3
HOH
HOH
218
D
TIP
225
3
HOH
HOH
225
D
TIP
238
3
HOH
HOH
238
D
n
1
665
A
n
2
666
A
n
3
667
A
ALA
668
n
4
ALA
668
A
ILE
669
n
5
ILE
669
A
ILE
670
n
6
ILE
670
A
TYR
671
n
7
TYR
671
A
THR
672
n
8
THR
672
A
VAL
673
n
9
VAL
673
A
GLU
674
n
10
GLU
674
A
LEU
675
n
11
LEU
675
A
LYS
676
n
12
LYS
676
A
ARG
677
n
13
ARG
677
A
TYR
678
n
14
TYR
678
A
GLY
679
n
15
GLY
679
A
GLY
680
n
16
GLY
680
A
PRO
681
n
17
PRO
681
A
LEU
682
n
18
LEU
682
A
GLY
683
n
19
GLY
683
A
ILE
684
n
20
ILE
684
A
THR
685
n
21
THR
685
A
ILE
686
n
22
ILE
686
A
SER
687
n
23
SER
687
A
GLY
688
n
24
GLY
688
A
THR
689
n
25
THR
689
A
GLU
690
n
26
GLU
690
A
GLU
691
n
27
GLU
691
A
PRO
692
n
28
PRO
692
A
PHE
693
n
29
PHE
693
A
ASP
694
n
30
ASP
694
A
PRO
695
n
31
PRO
695
A
ILE
696
n
32
ILE
696
A
ILE
697
n
33
ILE
697
A
ILE
698
n
34
ILE
698
A
SER
699
n
35
SER
699
A
SER
700
n
36
SER
700
A
LEU
701
n
37
LEU
701
A
THR
702
n
38
THR
702
A
LYS
703
n
39
LYS
703
A
GLY
704
n
40
GLY
704
A
GLY
705
n
41
GLY
705
A
LEU
706
n
42
LEU
706
A
ALA
707
n
43
ALA
707
A
GLU
708
n
44
GLU
708
A
ARG
709
n
45
ARG
709
A
THR
710
n
46
THR
710
A
GLY
711
n
47
GLY
711
A
ALA
712
n
48
ALA
712
A
ILE
713
n
49
ILE
713
A
HIS
714
n
50
HIS
714
A
ILE
715
n
51
ILE
715
A
GLY
716
n
52
GLY
716
A
ASP
717
n
53
ASP
717
A
ARG
718
n
54
ARG
718
A
ILE
719
n
55
ILE
719
A
LEU
720
n
56
LEU
720
A
ALA
721
n
57
ALA
721
A
ILE
722
n
58
ILE
722
A
ASN
723
n
59
ASN
723
A
SER
724
n
60
SER
724
A
SER
725
n
61
SER
725
A
SER
726
n
62
SER
726
A
LEU
727
n
63
LEU
727
A
LYS
728
n
64
LYS
728
A
GLY
729
n
65
GLY
729
A
LYS
730
n
66
LYS
730
A
PRO
731
n
67
PRO
731
A
LEU
732
n
68
LEU
732
A
SER
733
n
69
SER
733
A
GLU
734
n
70
GLU
734
A
ALA
735
n
71
ALA
735
A
ILE
736
n
72
ILE
736
A
HIS
737
n
73
HIS
737
A
LEU
738
n
74
LEU
738
A
LEU
739
n
75
LEU
739
A
GLN
740
n
76
GLN
740
A
MET
741
n
77
MET
741
A
ALA
742
n
78
ALA
742
A
GLY
743
n
79
GLY
743
A
GLU
744
n
80
GLU
744
A
THR
745
n
81
THR
745
A
VAL
746
n
82
VAL
746
A
THR
747
n
83
THR
747
A
LEU
748
n
84
LEU
748
A
LYS
749
n
85
LYS
749
A
ILE
750
n
86
ILE
750
A
LYS
751
n
87
LYS
751
A
LYS
752
n
88
LYS
752
A
GLN
753
n
89
GLN
753
A
n
90
754
A
n
91
755
A
n
92
756
A
n
93
757
A
n
94
758
A
n
95
759
A
n
96
760
A
n
97
761
A
n
1
665
B
n
2
666
B
n
3
667
B
ALA
668
n
4
ALA
668
B
ILE
669
n
5
ILE
669
B
ILE
670
n
6
ILE
670
B
TYR
671
n
7
TYR
671
B
THR
672
n
8
THR
672
B
VAL
673
n
9
VAL
673
B
GLU
674
n
10
GLU
674
B
LEU
675
n
11
LEU
675
B
LYS
676
n
12
LYS
676
B
ARG
677
n
13
ARG
677
B
TYR
678
n
14
TYR
678
B
GLY
679
n
15
GLY
679
B
GLY
680
n
16
GLY
680
B
PRO
681
n
17
PRO
681
B
LEU
682
n
18
LEU
682
B
GLY
683
n
19
GLY
683
B
ILE
684
n
20
ILE
684
B
THR
685
n
21
THR
685
B
ILE
686
n
22
ILE
686
B
SER
687
n
23
SER
687
B
GLY
688
n
24
GLY
688
B
THR
689
n
25
THR
689
B
GLU
690
n
26
GLU
690
B
GLU
691
n
27
GLU
691
B
PRO
692
n
28
PRO
692
B
PHE
693
n
29
PHE
693
B
ASP
694
n
30
ASP
694
B
PRO
695
n
31
PRO
695
B
ILE
696
n
32
ILE
696
B
ILE
697
n
33
ILE
697
B
ILE
698
n
34
ILE
698
B
SER
699
n
35
SER
699
B
SER
700
n
36
SER
700
B
LEU
701
n
37
LEU
701
B
THR
702
n
38
THR
702
B
LYS
703
n
39
LYS
703
B
GLY
704
n
40
GLY
704
B
GLY
705
n
41
GLY
705
B
LEU
706
n
42
LEU
706
B
ALA
707
n
43
ALA
707
B
GLU
708
n
44
GLU
708
B
ARG
709
n
45
ARG
709
B
THR
710
n
46
THR
710
B
GLY
711
n
47
GLY
711
B
ALA
712
n
48
ALA
712
B
ILE
713
n
49
ILE
713
B
HIS
714
n
50
HIS
714
B
ILE
715
n
51
ILE
715
B
GLY
716
n
52
GLY
716
B
ASP
717
n
53
ASP
717
B
ARG
718
n
54
ARG
718
B
ILE
719
n
55
ILE
719
B
LEU
720
n
56
LEU
720
B
ALA
721
n
57
ALA
721
B
ILE
722
n
58
ILE
722
B
ASN
723
n
59
ASN
723
B
SER
724
n
60
SER
724
B
SER
725
n
61
SER
725
B
SER
726
n
62
SER
726
B
LEU
727
n
63
LEU
727
B
LYS
728
n
64
LYS
728
B
GLY
729
n
65
GLY
729
B
LYS
730
n
66
LYS
730
B
PRO
731
n
67
PRO
731
B
LEU
732
n
68
LEU
732
B
SER
733
n
69
SER
733
B
GLU
734
n
70
GLU
734
B
ALA
735
n
71
ALA
735
B
ILE
736
n
72
ILE
736
B
HIS
737
n
73
HIS
737
B
LEU
738
n
74
LEU
738
B
LEU
739
n
75
LEU
739
B
GLN
740
n
76
GLN
740
B
MET
741
n
77
MET
741
B
ALA
742
n
78
ALA
742
B
GLY
743
n
79
GLY
743
B
GLU
744
n
80
GLU
744
B
THR
745
n
81
THR
745
B
VAL
746
n
82
VAL
746
B
THR
747
n
83
THR
747
B
LEU
748
n
84
LEU
748
B
LYS
749
n
85
LYS
749
B
ILE
750
n
86
ILE
750
B
LYS
751
n
87
LYS
751
B
LYS
752
n
88
LYS
752
B
GLN
753
n
89
GLN
753
B
n
90
754
B
n
91
755
B
n
92
756
B
n
93
757
B
n
94
758
B
n
95
759
B
n
96
760
B
n
97
761
B
ALA
1
n
1
ALA
1
C
THR
2
n
2
THR
2
C
VAL
3
n
3
VAL
3
C
ARG
4
n
4
ARG
4
C
THR
5
n
5
THR
5
C
TYR
6
n
6
TYR
6
C
SER
7
n
7
SER
7
C
CYS
8
n
8
CYS
8
C
ALA
1
n
1
ALA
1
D
THR
2
n
2
THR
2
D
VAL
3
n
3
VAL
3
D
ARG
4
n
4
ARG
4
D
THR
5
n
5
THR
5
D
TYR
6
n
6
TYR
6
D
SER
7
n
7
SER
7
D
CYS
8
n
8
CYS
8
D
author_and_software_defined_assembly
PISA
4
tetrameric
3160
-20
9400
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
SER
725
A
O
SER
61
A
N
ILE
722
A
N
ILE
58
A
N
ARG
718
A
N
ARG
54
A
O
LYS
751
A
O
LYS
87
A
O
ILE
750
A
O
ILE
86
A
N
TYR
671
A
N
TYR
7
A
N
THR
672
A
N
THR
8
B
O
GLU
674
B
O
GLU
10
B
N
TYR
671
B
N
TYR
7
B
O
ILE
750
B
O
ILE
86
B
O
LYS
751
B
O
LYS
87
B
N
ARG
718
B
N
ARG
54
B
N
ILE
722
B
N
ILE
58
B
O
SER
725
B
O
SER
61
A
O
ILE
697
A
O
ILE
33
A
N
SER
687
A
N
SER
23
A
N
ILE
686
A
N
ILE
22
C
O
TYR
6
C
O
TYR
6
B
O
ILE
697
B
O
ILE
33
B
N
SER
687
B
N
SER
23
B
N
GLY
688
B
N
GLY
24
D
O
ARG
4
D
O
ARG
4
1
A
SER
665
A
SER
1
1
Y
1
A
SER
666
A
SER
2
1
Y
1
A
GLY
667
A
GLY
3
1
Y
1
A
THR
754
A
THR
90
1
Y
1
A
ASP
755
A
ASP
91
1
Y
1
A
ALA
756
A
ALA
92
1
Y
1
A
GLN
757
A
GLN
93
1
Y
1
A
PRO
758
A
PRO
94
1
Y
1
A
ALA
759
A
ALA
95
1
Y
1
A
SER
760
A
SER
96
1
Y
1
A
SER
761
A
SER
97
1
Y
1
B
SER
665
B
SER
1
1
Y
1
B
SER
666
B
SER
2
1
Y
1
B
GLY
667
B
GLY
3
1
Y
1
B
THR
754
B
THR
90
1
Y
1
B
ASP
755
B
ASP
91
1
Y
1
B
ALA
756
B
ALA
92
1
Y
1
B
GLN
757
B
GLN
93
1
Y
1
B
PRO
758
B
PRO
94
1
Y
1
B
ALA
759
B
ALA
95
1
Y
1
B
SER
760
B
SER
96
1
Y
1
B
SER
761
B
SER
97
1
Y
1
A
PRO
692
-29.88
-61.56
1
A
SER
724
77.80
-6.39
1
B
TYR
678
57.45
-111.66
1
B
SER
724
79.17
-3.05
PROTEIN_REP.PARAM
CNS_PROTEIN.TOP
WATER_REP.PARAM
WATER.TOP
29.4
-3.03
-0.88
0.00
-2.00
0.00
5.03
Structure solved by Br-MAD phasing of peptide free crystal
0.222
0.005
0.2
0.2024
0.2
1.80
27.26
1822
24896
7.3
98.3
RANDOM
1
RESTRAINED
THROUGHOUT
0
0
MOLECULAR REPLACEMENT
Engh & Huber
FLAT MODEL
56.4386
0.35575
0.23
0.21
5.00
0.16
0.13
1.80
27.26
236
1644
0
0
1408
0.005
1.3
25.3
0.75
0.232
1.91
3930
6
94.3
17.5
1.8
50
1N7F
192446
191677
3
3
0.088
0.088
1
10.1
7.58
99.6
0.566
1.8
1.89
4.5
0.566
97.3
data reduction
MOSFLM
data scaling
SCALA
phasing
AMoRE
refinement
CNS
1.1
data scaling
CCP4
(SCALA)
Crystal structure of the sixth PDZ domain of GRIP1 in complex with liprin C-terminal peptide
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
A
GLY
705
A
GLY
41
HELX_P
A
GLY
711
A
GLY
47
1
1
7
A
PRO
731
A
PRO
67
HELX_P
A
GLN
740
A
GLN
76
1
2
10
B
GLY
705
B
GLY
41
HELX_P
B
GLY
711
B
GLY
47
1
3
7
B
PRO
731
B
PRO
67
HELX_P
B
ALA
742
B
ALA
78
1
4
12
PROTEIN BINDING
PDZ, grip, liprin, PROTEIN BINDING
GRIP1_RAT
UNP
1
665
P97879
SSGAIIYTVELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGE
TVTLKIKKQTDAQPASS
AAH34046
GB
2
1195
21707845
ATVRTYSC
665
761
1N7F
665
761
P97879
A
1
1
97
665
761
1N7F
665
761
P97879
B
1
1
97
1195
1202
1N7F
1
8
21707845
C
2
1
8
1195
1202
1N7F
1
8
21707845
D
2
1
8
8
3
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
SER
725
A
SER
61
A
SER
726
A
SER
62
A
ARG
718
A
ARG
54
A
ILE
722
A
ILE
58
A
THR
745
A
THR
81
A
LYS
751
A
LYS
87
A
ILE
670
A
ILE
6
A
LYS
676
A
LYS
12
B
ILE
670
B
ILE
6
B
LYS
676
B
LYS
12
B
THR
745
B
THR
81
B
LYS
751
B
LYS
87
B
ARG
718
B
ARG
54
B
ILE
722
B
ILE
58
B
SER
725
B
SER
61
B
SER
726
B
SER
62
A
ILE
697
A
ILE
33
A
LEU
701
A
LEU
37
A
ILE
684
A
ILE
20
A
GLY
688
A
GLY
24
C
ARG
4
C
ARG
4
C
SER
7
C
SER
7
B
ILE
697
B
ILE
33
B
LEU
701
B
LEU
37
B
ILE
684
B
ILE
20
B
GLY
688
B
GLY
24
D
ARG
4
D
ARG
4
D
SER
7
D
SER
7
155
H 3 2