1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Pons, J.L.
de Lamotte, F.
Gautier, M.F.
Delsuc, M.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C22 H44 O9 P -1
483.553
1-MYRISTOYL-2-HYDROXY-SN-GLYCERO-3-[PHOSPHO-RAC-(1-GLYCEROL)]
LYSOPHOSPHATIDYLGLYCEROL
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
278
14249
14256
10.1074/jbc.M211683200
12525478
Refined solution structure of a liganded type 2 wheat nonspecific lipid transfer protein.
2003
10.2210/pdb1n89/pdb
pdb_00001n89
PGM A 68 HAS WRONG CHIRALITY AT ATOM C8
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
6985.943
lipid transfer protein
1
man
polymer
483.553
1-MYRISTOYL-2-HYDROXY-SN-GLYCERO-3-[PHOSPHO-RAC-(1-GLYCEROL)]
1
syn
non-polymer
no
no
ACQASQLAVCASAILSGAKPSGECCGNLRAQQGCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVPHC
ACQASQLAVCASAILSGAKPSGECCGNLRAQQGCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVPHC
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
durum wheat
Triticum
Triticum turgidum
subsp. durum
Pichia
sample
4567
Triticum turgidum subsp. durum
4922
Pichia pastoris
GS115
database_2
database_PDB_caveat
pdbx_database_status
pdbx_nmr_software
pdbx_struct_assembly
pdbx_struct_assembly_prop
pdbx_struct_oper_list
database_2
pdbx_database_remark
pdbx_database_status
struct_site
repository
Initial release
Version format compliance
Version format compliance
Advisory
Data collection
Database references
Derived calculations
Other
Advisory
Database references
Derived calculations
Other
1
0
2003-03-18
1
1
2008-04-28
1
2
2011-07-13
1
3
2020-02-05
1
4
2023-06-14
_pdbx_database_status.status_code_cs
_pdbx_nmr_software.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_remark.text
_pdbx_database_status.status_code_nmr_data
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
HELIX
Author determined the secondary structure.
RCSB
Y
RCSB
2002-11-20
REL
REL
REL
REL
PGM
1-MYRISTOYL-2-HYDROXY-SN-GLYCERO-3-[PHOSPHO-RAC-(1-GLYCEROL)]
structures with the lowest energy
250
9
DQF-COSY
2D NOESY
2D TOCSY
3D_15N-separated_NOESY
3D_15N-HSQC-TOCSY
3.5
ambient
295.2
K
annealing protocol
1
minimized average structure
2.8 mmol 15N-LTP with 1.5 eq PGM
70 mmol Phosphate
collection
UXNMR
data analysis
Gifa
V4
Brunger et al.
refinement
CNS
600
Bruker
AMX
PGM
68
2
PGM
PGM
68
A
ALA
1
n
1
ALA
1
A
CYS
2
n
2
CYS
2
A
GLN
3
n
3
GLN
3
A
ALA
4
n
4
ALA
4
A
SER
5
n
5
SER
5
A
GLN
6
n
6
GLN
6
A
LEU
7
n
7
LEU
7
A
ALA
8
n
8
ALA
8
A
VAL
9
n
9
VAL
9
A
CYS
10
n
10
CYS
10
A
ALA
11
n
11
ALA
11
A
SER
12
n
12
SER
12
A
ALA
13
n
13
ALA
13
A
ILE
14
n
14
ILE
14
A
LEU
15
n
15
LEU
15
A
SER
16
n
16
SER
16
A
GLY
17
n
17
GLY
17
A
ALA
18
n
18
ALA
18
A
LYS
19
n
19
LYS
19
A
PRO
20
n
20
PRO
20
A
SER
21
n
21
SER
21
A
GLY
22
n
22
GLY
22
A
GLU
23
n
23
GLU
23
A
CYS
24
n
24
CYS
24
A
CYS
25
n
25
CYS
25
A
GLY
26
n
26
GLY
26
A
ASN
27
n
27
ASN
27
A
LEU
28
n
28
LEU
28
A
ARG
29
n
29
ARG
29
A
ALA
30
n
30
ALA
30
A
GLN
31
n
31
GLN
31
A
GLN
32
n
32
GLN
32
A
GLY
33
n
33
GLY
33
A
CYS
34
n
34
CYS
34
A
PHE
35
n
35
PHE
35
A
CYS
36
n
36
CYS
36
A
GLN
37
n
37
GLN
37
A
TYR
38
n
38
TYR
38
A
ALA
39
n
39
ALA
39
A
LYS
40
n
40
LYS
40
A
ASP
41
n
41
ASP
41
A
PRO
42
n
42
PRO
42
A
THR
43
n
43
THR
43
A
TYR
44
n
44
TYR
44
A
GLY
45
n
45
GLY
45
A
GLN
46
n
46
GLN
46
A
TYR
47
n
47
TYR
47
A
ILE
48
n
48
ILE
48
A
ARG
49
n
49
ARG
49
A
SER
50
n
50
SER
50
A
PRO
51
n
51
PRO
51
A
HIS
52
n
52
HIS
52
A
ALA
53
n
53
ALA
53
A
ARG
54
n
54
ARG
54
A
ASP
55
n
55
ASP
55
A
THR
56
n
56
THR
56
A
LEU
57
n
57
LEU
57
A
THR
58
n
58
THR
58
A
SER
59
n
59
SER
59
A
CYS
60
n
60
CYS
60
A
GLY
61
n
61
GLY
61
A
LEU
62
n
62
LEU
62
A
ALA
63
n
63
ALA
63
A
VAL
64
n
64
VAL
64
A
PRO
65
n
65
PRO
65
A
HIS
66
n
66
HIS
66
A
CYS
67
n
67
CYS
67
A
author_defined_assembly
1
monomeric
860
-12
4460
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
identity operation
0.0000000000
0.0000000000
0.0000000000
3
A
C8
PGM
68
WRONG HAND
4
A
C8
PGM
68
WRONG HAND
5
A
C8
PGM
68
WRONG HAND
6
A
C8
PGM
68
WRONG HAND
9
A
C8
PGM
68
WRONG HAND
1
A
CYS
2
59.94
93.88
1
A
SER
5
-149.17
-36.00
1
A
LEU
15
-73.70
-80.83
1
A
SER
16
-60.22
-75.32
1
A
ALA
18
-58.22
-76.94
1
A
PRO
20
-53.71
-171.99
1
A
SER
21
-174.39
140.99
1
A
GLN
31
-81.93
-74.17
1
A
GLN
32
49.01
19.62
1
A
LEU
62
-109.78
-60.03
1
A
PRO
65
-57.19
-160.42
2
A
LEU
15
-74.06
-79.50
2
A
ALA
18
-57.63
-79.10
2
A
PRO
20
-69.08
-174.69
2
A
SER
21
-173.41
138.57
2
A
GLN
31
-81.36
-72.66
2
A
GLN
32
47.30
20.68
2
A
PRO
42
-82.09
38.16
2
A
ARG
49
-80.45
31.06
2
A
PRO
65
-77.74
31.71
3
A
GLN
3
-156.64
-56.45
3
A
LEU
15
-68.11
-77.85
3
A
SER
16
-54.01
-70.20
3
A
ALA
18
-58.60
-77.83
3
A
LYS
19
-171.29
143.52
3
A
SER
21
-166.32
-162.61
3
A
GLN
31
-81.07
-71.86
3
A
GLN
32
48.28
20.03
3
A
TYR
44
-89.71
-75.93
3
A
ARG
49
-80.67
31.00
3
A
LEU
62
-134.13
-92.32
3
A
PRO
65
-81.83
32.28
4
A
CYS
2
59.99
99.35
4
A
GLN
6
-86.86
48.45
4
A
LEU
7
-151.99
-39.94
4
A
LEU
15
-65.16
-74.38
4
A
ALA
18
-61.75
-77.06
4
A
PRO
20
-63.50
-167.03
4
A
SER
21
-174.71
144.63
4
A
GLN
31
-81.41
-71.60
4
A
GLN
32
48.76
19.25
4
A
ASP
41
-57.44
109.10
4
A
LEU
62
-123.48
-81.00
4
A
PRO
65
-57.73
-160.57
5
A
LEU
15
-74.61
-74.31
5
A
ALA
18
-67.89
-77.62
5
A
PRO
20
-55.44
-164.28
5
A
SER
21
-172.41
136.92
5
A
GLN
31
-81.09
-71.60
5
A
GLN
32
46.39
21.72
5
A
CYS
34
-135.10
-37.08
5
A
LEU
62
-113.87
-83.57
5
A
PRO
65
-56.42
-160.21
6
A
CYS
2
-106.26
-67.40
6
A
GLN
3
-161.71
108.04
6
A
ALA
13
-140.58
21.27
6
A
LYS
19
-178.97
94.92
6
A
PRO
20
-67.00
-167.26
6
A
SER
21
-172.45
144.38
6
A
GLN
31
-80.89
-71.56
6
A
GLN
32
48.66
19.80
6
A
CYS
34
-135.27
-38.08
6
A
THR
43
-170.75
-45.27
6
A
GLN
46
-164.16
-40.72
6
A
LEU
62
-116.99
-76.49
6
A
PRO
65
-58.02
-160.66
7
A
CYS
2
61.37
104.44
7
A
LEU
15
-68.11
-77.26
7
A
ALA
18
-59.36
-78.70
7
A
PRO
20
-53.62
-177.92
7
A
SER
21
-174.76
135.64
7
A
GLN
31
-81.41
-71.31
7
A
GLN
32
51.66
17.97
7
A
CYS
34
-137.53
-34.81
7
A
LEU
62
-119.04
-80.85
7
A
PRO
65
-62.92
-163.26
8
A
CYS
2
-157.42
-60.59
8
A
GLN
3
-161.25
-42.88
8
A
LEU
15
-69.85
-75.02
8
A
LYS
19
178.52
157.85
8
A
PRO
20
-69.28
-179.20
8
A
GLN
31
-81.08
-71.73
8
A
GLN
32
49.86
19.06
8
A
CYS
34
-137.40
-34.58
8
A
ASP
41
-57.94
109.27
8
A
THR
43
-159.96
-45.39
8
A
TYR
44
-90.10
-62.62
8
A
ARG
49
-80.64
30.55
8
A
LEU
62
-112.25
-78.84
8
A
PRO
65
-56.69
-160.10
9
A
LEU
15
-53.68
-81.54
9
A
SER
16
-70.69
-79.64
9
A
ALA
18
-59.95
-78.45
9
A
LYS
19
-174.75
141.79
9
A
PRO
20
-52.01
-179.86
9
A
SER
21
-174.22
139.64
9
A
GLN
31
-81.75
-71.90
9
A
GLN
32
47.01
20.66
9
A
TYR
44
-105.75
-62.20
9
A
ARG
49
-80.64
30.56
9
A
PRO
65
-75.90
33.05
minimized average
Solution structure of a liganded type 2 wheat non-specific Lipid Transfer Protein
1
N
N
2
N
N
A
LEU
7
A
LEU
7
HELX_P
A
LEU
15
A
LEU
15
1
1
9
A
GLY
22
A
GLY
22
HELX_P
A
GLN
31
A
GLN
31
1
2
10
A
CYS
34
A
CYS
34
HELX_P
A
LYS
40
A
LYS
40
1
3
7
A
TYR
44
A
TYR
44
HELX_P
A
ARG
49
A
ARG
49
1
5
6
A
PRO
51
A
PRO
51
HELX_P
A
CYS
60
A
CYS
60
1
4
10
disulf
2.031
A
CYS
2
A
SG
CYS
2
1_555
A
CYS
34
A
SG
CYS
34
1_555
disulf
2.029
A
CYS
10
A
SG
CYS
10
1_555
A
CYS
24
A
SG
CYS
24
1_555
disulf
2.030
A
CYS
25
A
SG
CYS
25
1_555
A
CYS
60
A
SG
CYS
60
1_555
disulf
2.030
A
CYS
36
A
SG
CYS
36
1_555
A
CYS
67
A
SG
CYS
67
1_555
LIPID TRANSPORT
lipid transfer protein, LIPID TRANSPORT
NLT2G_WHEAT
UNP
1
30
P82900
ACQASQLAVCASAILSGAKPSGECCGNLRAQQGCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVPHC
30
96
1N89
1
67
P82900
A
1
1
67
BINDING SITE FOR RESIDUE PGM A 68
A
PGM
68
Software
10
A
LEU
7
A
LEU
7
10
1_555
A
PHE
35
A
PHE
35
10
1_555
A
TYR
44
A
TYR
44
10
1_555
A
TYR
47
A
TYR
47
10
1_555
A
ILE
48
A
ILE
48
10
1_555
A
ARG
54
A
ARG
54
10
1_555
A
LEU
57
A
LEU
57
10
1_555
A
VAL
64
A
VAL
64
10
1_555
A
PRO
65
A
PRO
65
10
1_555
A
HIS
66
A
HIS
66
10
1_555