0.012092 0.006981 0.000000 0.000000 0.013963 0.000000 0.000000 0.000000 0.014306 0.00000 0.00000 0.00000 Collins, B.M. Watson, P.J. Owen, D.J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 82.700 82.700 69.900 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Dev.Cell 1534-5807 4 321 332 10.1016/S1534-5807(03)00037-6 12636914 The Structure of the GGA1-GAT Domain Reveals the Molecular Basis for ARF Binding and Membrane Association of GGAs 2003 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2002-06-15 MAD M x-ray 1 0.9796 1.0 0.9798 1.0 0.9393 1.0 ID14-4 ESRF 0.9796, 0.9798, 0.9393 SYNCHROTRON ESRF BEAMLINE ID14-4 18412.449 ADP-ribosylation factor binding protein GGA1 GAT domain, Residues 165-314 of SWS Q9UJY5 1 man polymer GGA1 appendage domain; Golgi-localized, gamma ear-containing, ARF-binding protein 1; Gamma-adaptin related protein 1 no yes (MSE)HHHHHH(MSE)KNVIFEDEEKSK(MSE)LARLLKSSHPEDLRAANKLIKE(MSE)VQEDQKR(MSE)EKISKRVN AIEEVNNNVKLLTE(MSE)V(MSE)SHSQGGAAAGSSEDL(MSE)KELYQRCER(MSE)RPTLFRLASDTEDNDEALAEI LQANDNLTQVINLYKQLVRGEEVNGDATAGSIPG MHHHHHHMKNVIFEDEEKSKMLARLLKSSHPEDLRAANKLIKEMVQEDQKRMEKISKRVNAIEEVNNNVKLLTEMVMSHS QGGAAAGSSEDLMKELYQRCERMRPTLFRLASDTEDNDEALAEILQANDNLTQVINLYKQLVRGEEVNGDATAGSIPG A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia sample 9606 Homo sapiens 562 Escherichia coli BL21(DE3)/pLysS plasmid pET 2 4.90 74.7 VAPOR DIFFUSION, HANGING DROP 4.5 sodium acetate, lithium sulphate, NaH2PO4/K2HPO4, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 289K 289 exptl_crystal_grow struct repository Initial release Version format compliance Version format compliance Experimental preparation Structure summary 1 0 2003-03-25 1 1 2008-04-28 1 2 2011-07-13 1 3 2018-02-14 _exptl_crystal_grow.pdbx_details _exptl_crystal_grow.temp _struct.title Structure of the appendage domain of gamma-adaptin RCSB Y RCSB 2002-11-27 REL REL n 1 157 A n 2 158 A n 3 159 A n 4 160 A n 5 161 A n 6 162 A n 7 163 A n 8 164 A n 9 165 A n 10 166 A n 11 167 A n 12 168 A n 13 169 A n 14 170 A ASP 171 n 15 ASP 171 A GLU 172 n 16 GLU 172 A GLU 173 n 17 GLU 173 A LYS 174 n 18 LYS 174 A SER 175 n 19 SER 175 A LYS 176 n 20 LYS 176 A MSE 177 n 21 MSE 177 A LEU 178 n 22 LEU 178 A ALA 179 n 23 ALA 179 A ARG 180 n 24 ARG 180 A LEU 181 n 25 LEU 181 A LEU 182 n 26 LEU 182 A LYS 183 n 27 LYS 183 A SER 184 n 28 SER 184 A SER 185 n 29 SER 185 A HIS 186 n 30 HIS 186 A PRO 187 n 31 PRO 187 A GLU 188 n 32 GLU 188 A ASP 189 n 33 ASP 189 A LEU 190 n 34 LEU 190 A ARG 191 n 35 ARG 191 A ALA 192 n 36 ALA 192 A ALA 193 n 37 ALA 193 A ASN 194 n 38 ASN 194 A LYS 195 n 39 LYS 195 A LEU 196 n 40 LEU 196 A ILE 197 n 41 ILE 197 A LYS 198 n 42 LYS 198 A GLU 199 n 43 GLU 199 A MSE 200 n 44 MSE 200 A VAL 201 n 45 VAL 201 A GLN 202 n 46 GLN 202 A GLU 203 n 47 GLU 203 A ASP 204 n 48 ASP 204 A GLN 205 n 49 GLN 205 A LYS 206 n 50 LYS 206 A ARG 207 n 51 ARG 207 A MSE 208 n 52 MSE 208 A GLU 209 n 53 GLU 209 A LYS 210 n 54 LYS 210 A ILE 211 n 55 ILE 211 A SER 212 n 56 SER 212 A LYS 213 n 57 LYS 213 A ARG 214 n 58 ARG 214 A VAL 215 n 59 VAL 215 A ASN 216 n 60 ASN 216 A ALA 217 n 61 ALA 217 A ILE 218 n 62 ILE 218 A GLU 219 n 63 GLU 219 A GLU 220 n 64 GLU 220 A VAL 221 n 65 VAL 221 A ASN 222 n 66 ASN 222 A ASN 223 n 67 ASN 223 A ASN 224 n 68 ASN 224 A VAL 225 n 69 VAL 225 A LYS 226 n 70 LYS 226 A LEU 227 n 71 LEU 227 A LEU 228 n 72 LEU 228 A THR 229 n 73 THR 229 A GLU 230 n 74 GLU 230 A MSE 231 n 75 MSE 231 A VAL 232 n 76 VAL 232 A MSE 233 n 77 MSE 233 A SER 234 n 78 SER 234 A HIS 235 n 79 HIS 235 A SER 236 n 80 SER 236 A GLN 237 n 81 GLN 237 A GLY 238 n 82 GLY 238 A n 83 239 A n 84 240 A n 85 241 A n 86 242 A n 87 243 A SER 244 n 88 SER 244 A SER 245 n 89 SER 245 A GLU 246 n 90 GLU 246 A ASP 247 n 91 ASP 247 A LEU 248 n 92 LEU 248 A MSE 249 n 93 MSE 249 A LYS 250 n 94 LYS 250 A GLU 251 n 95 GLU 251 A LEU 252 n 96 LEU 252 A TYR 253 n 97 TYR 253 A GLN 254 n 98 GLN 254 A ARG 255 n 99 ARG 255 A CYS 256 n 100 CYS 256 A GLU 257 n 101 GLU 257 A ARG 258 n 102 ARG 258 A MSE 259 n 103 MSE 259 A ARG 260 n 104 ARG 260 A PRO 261 n 105 PRO 261 A THR 262 n 106 THR 262 A LEU 263 n 107 LEU 263 A PHE 264 n 108 PHE 264 A ARG 265 n 109 ARG 265 A LEU 266 n 110 LEU 266 A ALA 267 n 111 ALA 267 A SER 268 n 112 SER 268 A ASP 269 n 113 ASP 269 A THR 270 n 114 THR 270 A GLU 271 n 115 GLU 271 A ASP 272 n 116 ASP 272 A ASN 273 n 117 ASN 273 A ASP 274 n 118 ASP 274 A GLU 275 n 119 GLU 275 A ALA 276 n 120 ALA 276 A LEU 277 n 121 LEU 277 A ALA 278 n 122 ALA 278 A GLU 279 n 123 GLU 279 A ILE 280 n 124 ILE 280 A LEU 281 n 125 LEU 281 A GLN 282 n 126 GLN 282 A ALA 283 n 127 ALA 283 A ASN 284 n 128 ASN 284 A ASP 285 n 129 ASP 285 A ASN 286 n 130 ASN 286 A LEU 287 n 131 LEU 287 A THR 288 n 132 THR 288 A GLN 289 n 133 GLN 289 A VAL 290 n 134 VAL 290 A ILE 291 n 135 ILE 291 A ASN 292 n 136 ASN 292 A LEU 293 n 137 LEU 293 A TYR 294 n 138 TYR 294 A LYS 295 n 139 LYS 295 A GLN 296 n 140 GLN 296 A LEU 297 n 141 LEU 297 A VAL 298 n 142 VAL 298 A ARG 299 n 143 ARG 299 A n 144 300 A n 145 301 A n 146 302 A n 147 303 A n 148 304 A n 149 305 A n 150 306 A n 151 307 A n 152 308 A n 153 309 A n 154 310 A n 155 311 A n 156 312 A n 157 313 A n 158 314 A author_defined_assembly 1 monomeric A MSE 177 SELENOMETHIONINE A MSE 21 MET A MSE 200 SELENOMETHIONINE A MSE 44 MET A MSE 208 SELENOMETHIONINE A MSE 52 MET A MSE 231 SELENOMETHIONINE A MSE 75 MET A MSE 233 SELENOMETHIONINE A MSE 77 MET A MSE 249 SELENOMETHIONINE A MSE 93 MET A MSE 259 SELENOMETHIONINE A MSE 103 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A MSE 157 A MSE 1 1 Y 1 A HIS 158 A HIS 2 1 Y 1 A HIS 159 A HIS 3 1 Y 1 A HIS 160 A HIS 4 1 Y 1 A HIS 161 A HIS 5 1 Y 1 A HIS 162 A HIS 6 1 Y 1 A HIS 163 A HIS 7 1 Y 1 A MSE 164 A MSE 8 1 Y 1 A LYS 165 A LYS 9 1 Y 1 A ASN 166 A ASN 10 1 Y 1 A VAL 167 A VAL 11 1 Y 1 A ILE 168 A ILE 12 1 Y 1 A PHE 169 A PHE 13 1 Y 1 A GLU 170 A GLU 14 1 Y 1 A GLY 239 A GLY 83 1 Y 1 A ALA 240 A ALA 84 1 Y 1 A ALA 241 A ALA 85 1 Y 1 A ALA 242 A ALA 86 1 Y 1 A GLY 243 A GLY 87 1 Y 1 A GLY 300 A GLY 144 1 Y 1 A GLU 301 A GLU 145 1 Y 1 A GLU 302 A GLU 146 1 Y 1 A VAL 303 A VAL 147 1 Y 1 A ASN 304 A ASN 148 1 Y 1 A GLY 305 A GLY 149 1 Y 1 A ASP 306 A ASP 150 1 Y 1 A ALA 307 A ALA 151 1 Y 1 A THR 308 A THR 152 1 Y 1 A ALA 309 A ALA 153 1 Y 1 A GLY 310 A GLY 154 1 Y 1 A SER 311 A SER 155 1 Y 1 A ILE 312 A ILE 156 1 Y 1 A PRO 313 A PRO 157 1 Y 1 A GLY 314 A GLY 158 1 Y 1 A SER 184 178.17 177.50 1 A SER 185 -52.93 -166.57 1 A PRO 187 -16.37 -83.47 1 A GLU 188 -93.54 -62.03 1 A ASP 189 -13.00 -71.42 1 A GLN 237 -151.76 -33.27 1 A GLU 246 -59.59 0.08 1 A PRO 261 -47.89 -72.10 1 A THR 270 -92.82 56.05 1 A ASN 273 175.13 89.77 -11.609 -29.295 0.000 -11.609 0.000 23.219 0.2833 0.2483 0.2485 0.2484 2.80 20. 294 6768 5495 random 1 THROUGHOUT 2.6 MAD Engh & Huber 2.80 20. 0 1006 0 0 1006 105 2.80 70. 1NAF 6684 2.6 0.066 1 14.2 3.7 99.7 0.399 2.80 2.95 2.6 3.6 99.7 data reduction MOSFLM data scaling SCALA phasing SHARP refinement CNS data scaling CCP4 (SCALA) ADP-ribosylation factor binding protein GGA1, GAT domain Crystal structure of the human GGA1 GAT domain 1 N N A GLU 172 A GLU 16 HELX_P A LYS 183 A LYS 27 1 1 12 A GLU 188 A GLU 32 HELX_P A HIS 235 A HIS 79 1 2 48 A ASP 247 A ASP 91 HELX_P A ARG 258 A ARG 102 1 3 12 A ARG 258 A ARG 102 HELX_P A THR 270 A THR 114 1 4 13 A ASN 273 A ASN 117 HELX_P A ARG 299 A ARG 143 1 5 27 covale 1.329 A LYS 176 A C LYS 20 1_555 A MSE 177 A N MSE 21 1_555 covale 1.327 A MSE 177 A C MSE 21 1_555 A LEU 178 A N LEU 22 1_555 covale 1.326 A GLU 199 A C GLU 43 1_555 A MSE 200 A N MSE 44 1_555 covale 1.329 A MSE 200 A C MSE 44 1_555 A VAL 201 A N VAL 45 1_555 covale 1.331 A ARG 207 A C ARG 51 1_555 A MSE 208 A N MSE 52 1_555 covale 1.329 A MSE 208 A C MSE 52 1_555 A GLU 209 A N GLU 53 1_555 covale 1.323 A GLU 230 A C GLU 74 1_555 A MSE 231 A N MSE 75 1_555 covale 1.324 A MSE 231 A C MSE 75 1_555 A VAL 232 A N VAL 76 1_555 covale 1.327 A VAL 232 A C VAL 76 1_555 A MSE 233 A N MSE 77 1_555 covale 1.328 A MSE 233 A C MSE 77 1_555 A SER 234 A N SER 78 1_555 covale 1.327 A LEU 248 A C LEU 92 1_555 A MSE 249 A N MSE 93 1_555 covale 1.329 A MSE 249 A C MSE 93 1_555 A LYS 250 A N LYS 94 1_555 covale 1.332 A ARG 258 A C ARG 102 1_555 A MSE 259 A N MSE 103 1_555 covale 1.336 A MSE 259 A C MSE 103 1_555 A ARG 260 A N ARG 104 1_555 SIGNALING PROTEIN, MEMBRANE PROTEIN clathrin-adaptor, GGA, GAT domain, helical paper-clip, three-helix bundle, SIGNALING PROTEIN, MEMBRANE PROTEIN GGA1_HUMAN UNP 1 165 Q9UJY5 KNVIFEDEEKSKMLARLLKSSHPEDLRAANKLIKEMVQEDQKRMEKISKRVNAIEEVNNNVKLLTEMVMSHSQGGAAAGS SEDLMKELYQRCERMRPTLFRLASDTEDNDEALAEILQANDNLTQVINLYKQLVRGEEVNGDATAGSIPG 165 314 1NAF 165 314 Q9UJY5 A 1 9 158 1 EXPRESSION TAG MSE 157 1NAF A Q9UJY5 UNP 1 1 EXPRESSION TAG HIS 158 1NAF A Q9UJY5 UNP 2 1 EXPRESSION TAG HIS 159 1NAF A Q9UJY5 UNP 3 1 EXPRESSION TAG HIS 160 1NAF A Q9UJY5 UNP 4 1 EXPRESSION TAG HIS 161 1NAF A Q9UJY5 UNP 5 1 EXPRESSION TAG HIS 162 1NAF A Q9UJY5 UNP 6 1 EXPRESSION TAG HIS 163 1NAF A Q9UJY5 UNP 7 1 EXPRESSION TAG MSE 164 1NAF A Q9UJY5 UNP 8 1 MET CLONING ARTIFACT MSE 177 1NAF A Q9UJY5 UNP 177 21 1 MET CLONING ARTIFACT MSE 200 1NAF A Q9UJY5 UNP 200 44 1 MET CLONING ARTIFACT MSE 208 1NAF A Q9UJY5 UNP 208 52 1 MET CLONING ARTIFACT MSE 231 1NAF A Q9UJY5 UNP 231 75 1 MET CLONING ARTIFACT MSE 233 1NAF A Q9UJY5 UNP 233 77 1 MET CLONING ARTIFACT MSE 249 1NAF A Q9UJY5 UNP 249 93 1 MET CLONING ARTIFACT MSE 259 1NAF A Q9UJY5 UNP 259 103 173 hexagonal P 63