0.00 7.642 0.443 11.210 A O5' G 1 ATOM A O5' G 1 1 1.00 1 O 0.00 8.912 -0.155 10.941 A C5' G 1 ATOM A C5' G 1 1 1.00 1 C 0.00 8.817 -1.675 10.908 A C4' G 1 ATOM A C4' G 1 1 1.00 1 C 0.00 8.338 -2.191 12.166 A O4' G 1 ATOM A O4' G 1 1 1.00 1 O 0.00 7.860 -2.140 9.825 A C3' G 1 ATOM A C3' G 1 1 1.00 1 C 0.00 8.581 -2.636 8.691 A O3' G 1 ATOM A O3' G 1 1 1.00 1 O 0.00 7.027 -3.225 10.459 A C2' G 1 ATOM A C2' G 1 1 1.00 1 C 0.00 7.291 -4.500 9.872 A O2' G 1 ATOM A O2' G 1 1 1.00 1 O 0.00 7.368 -3.231 11.921 A C1' G 1 ATOM A C1' G 1 1 1.00 1 C 0.00 6.140 -3.038 12.704 A N9 G 1 ATOM A N9 G 1 1 1.00 1 N 0.00 5.821 -2.093 13.620 A C8 G 1 ATOM A C8 G 1 1 1.00 1 C 0.00 4.642 -2.146 14.145 A N7 G 1 ATOM A N7 G 1 1 1.00 1 N 0.00 4.096 -3.263 13.503 A C5 G 1 ATOM A C5 G 1 1 1.00 1 C 0.00 2.814 -3.857 13.638 A C6 G 1 ATOM A C6 G 1 1 1.00 1 C 0.00 1.886 -3.518 14.365 A O6 G 1 ATOM A O6 G 1 1 1.00 1 O 0.00 2.676 -4.959 12.811 A N1 G 1 ATOM A N1 G 1 1 1.00 1 N 0.00 3.642 -5.440 11.957 A C2 G 1 ATOM A C2 G 1 1 1.00 1 C 0.00 3.315 -6.511 11.245 A N2 G 1 ATOM A N2 G 1 1 1.00 1 N 0.00 4.848 -4.893 11.821 A N3 G 1 ATOM A N3 G 1 1 1.00 1 N 0.00 5.009 -3.812 12.620 A C4 G 1 ATOM A C4 G 1 1 1.00 1 C 0.00 7.998 -2.449 7.202 A P G 2 ATOM A P G 1 2 1.00 1 P 0.00 9.144 -2.323 6.276 A OP1 G 2 ATOM A OP1 G 1 2 1.00 1 O 0.00 6.963 -1.391 7.243 A OP2 G 2 ATOM A OP2 G 1 2 1.00 1 O 0.00 7.266 -3.857 6.916 A O5' G 2 ATOM A O5' G 1 2 1.00 1 O 0.00 8.008 -5.003 6.475 A C5' G 2 ATOM A C5' G 1 2 1.00 1 C 0.00 7.087 -6.197 6.204 A C4' G 2 ATOM A C4' G 1 2 1.00 1 C 0.00 6.313 -6.505 7.377 A O4' G 2 ATOM A O4' G 1 2 1.00 1 O 0.00 6.118 -5.907 5.061 A C3' G 2 ATOM A C3' G 1 2 1.00 1 C 0.00 6.420 -6.712 3.907 A O3' G 2 ATOM A O3' G 1 2 1.00 1 O 0.00 4.741 -6.217 5.597 A C2' G 2 ATOM A C2' G 1 2 1.00 1 C 0.00 4.186 -7.389 4.989 A O2' G 2 ATOM A O2' G 1 2 1.00 1 O 0.00 4.905 -6.430 7.081 A C1' G 2 ATOM A C1' G 1 2 1.00 1 C 0.00 4.270 -5.329 7.821 A N9 G 2 ATOM A N9 G 1 2 1.00 1 N 0.00 4.812 -4.179 8.267 A C8 G 2 ATOM A C8 G 1 2 1.00 1 C 0.00 4.056 -3.386 8.956 A N7 G 2 ATOM A N7 G 1 2 1.00 1 N 0.00 2.846 -4.091 8.965 A C5 G 2 ATOM A C5 G 1 2 1.00 1 C 0.00 1.596 -3.761 9.557 A C6 G 2 ATOM A C6 G 1 2 1.00 1 C 0.00 1.303 -2.779 10.237 A O6 G 2 ATOM A O6 G 1 2 1.00 1 O 0.00 0.646 -4.742 9.313 A N1 G 2 ATOM A N1 G 1 2 1.00 1 N 0.00 0.865 -5.897 8.593 A C2 G 2 ATOM A C2 G 1 2 1.00 1 C 0.00 -0.178 -6.697 8.422 A N2 G 2 ATOM A N2 G 1 2 1.00 1 N 0.00 2.031 -6.218 8.045 A N3 G 2 ATOM A N3 G 1 2 1.00 1 N 0.00 2.973 -5.280 8.265 A C4 G 2 ATOM A C4 G 1 2 1.00 1 C 0.00 5.807 -6.348 2.458 A P A 3 ATOM A P A 1 3 1.00 1 P 0.00 6.597 -7.059 1.427 A OP1 A 3 ATOM A OP1 A 1 3 1.00 1 O 0.00 5.651 -4.878 2.382 A OP2 A 3 ATOM A OP2 A 1 3 1.00 1 O 0.00 4.333 -7.009 2.511 A O5' A 3 ATOM A O5' A 1 3 1.00 1 O 0.00 4.159 -8.423 2.342 A C5' A 3 ATOM A C5' A 1 3 1.00 1 C 0.00 2.692 -8.849 2.442 A C4' A 3 ATOM A C4' A 1 3 1.00 1 C 0.00 2.161 -8.661 3.773 A O4' A 3 ATOM A O4' A 1 3 1.00 1 O 0.00 1.813 -8.045 1.501 A C3' A 3 ATOM A C3' A 1 3 1.00 1 C 0.00 1.683 -8.695 0.229 A O3' A 3 ATOM A O3' A 1 3 1.00 1 O 0.00 0.501 -7.951 2.234 A C2' A 3 ATOM A C2' A 1 3 1.00 1 C 0.00 -0.347 -9.063 1.925 A O2' A 3 ATOM A O2' A 1 3 1.00 1 O 0.00 0.900 -7.959 3.682 A C1' A 3 ATOM A C1' A 1 3 1.00 1 C 0.00 1.049 -6.581 4.177 A N9 A 3 ATOM A N9 A 1 3 1.00 1 N 0.00 2.110 -5.747 4.060 A C8 A 3 ATOM A C8 A 1 3 1.00 1 C 0.00 1.990 -4.557 4.539 A N7 A 3 ATOM A N7 A 1 3 1.00 1 N 0.00 0.686 -4.586 5.043 A C5 A 3 ATOM A C5 A 1 3 1.00 1 C 0.00 -0.096 -3.627 5.693 A C6 A 3 ATOM A C6 A 1 3 1.00 1 C 0.00 0.334 -2.394 5.949 A N6 A 3 ATOM A N6 A 1 3 1.00 1 N 0.00 -1.341 -3.980 6.056 A N1 A 3 ATOM A N1 A 1 3 1.00 1 N 0.00 -1.796 -5.208 5.796 A C2 A 3 ATOM A C2 A 1 3 1.00 1 C 0.00 -1.142 -6.196 5.184 A N3 A 3 ATOM A N3 A 1 3 1.00 1 N 0.00 0.104 -5.814 4.830 A C4 A 3 ATOM A C4 A 1 3 1.00 1 C 0.00 1.636 -7.845 -1.140 A P G 4 ATOM A P G 1 4 1.00 1 P 0.00 2.247 -8.661 -2.212 A OP1 G 4 ATOM A OP1 G 1 4 1.00 1 O 0.00 2.150 -6.482 -0.868 A OP2 G 4 ATOM A OP2 G 1 4 1.00 1 O 0.00 0.054 -7.736 -1.421 A O5' G 4 ATOM A O5' G 1 4 1.00 1 O 0.00 -0.767 -8.911 -1.456 A C5' G 4 ATOM A C5' G 1 4 1.00 1 C 0.00 -2.216 -8.590 -1.110 A C4' G 4 ATOM A C4' G 1 4 1.00 1 C 0.00 -2.301 -7.988 0.200 A O4' G 4 ATOM A O4' G 1 4 1.00 1 O 0.00 -2.810 -7.609 -2.108 A C3' G 4 ATOM A C3' G 1 4 1.00 1 C 0.00 -3.697 -8.266 -3.033 A O3' G 4 ATOM A O3' G 1 4 1.00 1 O 0.00 -3.531 -6.588 -1.281 A C2' G 4 ATOM A C2' G 1 4 1.00 1 C 0.00 -4.950 -6.788 -1.312 A O2' G 4 ATOM A O2' G 1 4 1.00 1 O 0.00 -3.000 -6.727 0.110 A C1' G 4 ATOM A C1' G 1 4 1.00 1 C 0.00 -2.119 -5.584 0.411 A N9 G 4 ATOM A N9 G 1 4 1.00 1 N 0.00 -0.820 -5.389 0.089 A C8 G 4 ATOM A C8 G 1 4 1.00 1 C 0.00 -0.272 -4.276 0.455 A N7 G 4 ATOM A N7 G 1 4 1.00 1 N 0.00 -1.336 -3.634 1.100 A C5 G 4 ATOM A C5 G 1 4 1.00 1 C 0.00 -1.391 -2.357 1.729 A C6 G 4 ATOM A C6 G 1 4 1.00 1 C 0.00 -0.493 -1.529 1.867 A O6 G 4 ATOM A O6 G 1 4 1.00 1 O 0.00 -2.655 -2.099 2.242 A N1 G 4 ATOM A N1 G 1 4 1.00 1 N 0.00 -3.734 -2.954 2.167 A C2 G 4 ATOM A C2 G 1 4 1.00 1 C 0.00 -4.869 -2.525 2.710 A N2 G 4 ATOM A N2 G 1 4 1.00 1 N 0.00 -3.690 -4.153 1.585 A N3 G 4 ATOM A N3 G 1 4 1.00 1 N 0.00 -2.470 -4.430 1.074 A C4 G 4 ATOM A C4 G 1 4 1.00 1 C 0.00 -4.149 -7.549 -4.411 A P A 5 ATOM A P A 1 5 1.00 1 P 0.00 -4.637 -8.595 -5.338 A OP1 A 5 ATOM A OP1 A 1 5 1.00 1 O 0.00 -3.062 -6.641 -4.837 A OP2 A 5 ATOM A OP2 A 1 5 1.00 1 O 0.00 -5.408 -6.645 -3.952 A O5' A 5 ATOM A O5' A 1 5 1.00 1 O 0.00 -6.754 -7.131 -4.061 A C5' A 5 ATOM A C5' A 1 5 1.00 1 C 0.00 -7.787 -6.013 -3.866 A C4' A 5 ATOM A C4' A 1 5 1.00 1 C 0.00 -7.627 -5.368 -2.578 A O4' A 5 ATOM A O4' A 1 5 1.00 1 O 0.00 -7.639 -4.925 -4.921 A C3' A 5 ATOM A C3' A 1 5 1.00 1 C 0.00 -8.567 -5.080 -6.001 A O3' A 5 ATOM A O3' A 1 5 1.00 1 O 0.00 -7.884 -3.645 -4.169 A C2' A 5 ATOM A C2' A 1 5 1.00 1 C 0.00 -9.266 -3.274 -4.207 A O2' A 5 ATOM A O2' A 1 5 1.00 1 O 0.00 -7.470 -3.941 -2.773 A C1' A 5 ATOM A C1' A 1 5 1.00 1 C 0.00 -6.071 -3.530 -2.543 A N9 A 5 ATOM A N9 A 1 5 1.00 1 N 0.00 -4.956 -4.270 -2.658 A C8 A 5 ATOM A C8 A 1 5 1.00 1 C 0.00 -3.835 -3.735 -2.313 A N7 A 5 ATOM A N7 A 1 5 1.00 1 N 0.00 -4.245 -2.460 -1.921 A C5 A 5 ATOM A C5 A 1 5 1.00 1 C 0.00 -3.546 -1.354 -1.434 A C6 A 5 ATOM A C6 A 1 5 1.00 1 C 0.00 -2.236 -1.372 -1.206 A N6 A 5 ATOM A N6 A 1 5 1.00 1 N 0.00 -4.251 -0.244 -1.158 A N1 A 5 ATOM A N1 A 1 5 1.00 1 N 0.00 -5.574 -0.223 -1.344 A C2 A 5 ATOM A C2 A 1 5 1.00 1 C 0.00 -6.340 -1.220 -1.790 A N3 A 5 ATOM A N3 A 1 5 1.00 1 N 0.00 -5.606 -2.319 -2.063 A C4 A 5 ATOM A C4 A 1 5 1.00 1 C 0.00 -8.305 -4.321 -7.401 A P U 6 ATOM A P U 1 6 1.00 1 P 0.00 -9.567 -4.332 -8.177 A OP1 U 6 ATOM A OP1 U 1 6 1.00 1 O 0.00 -7.068 -4.867 -8.000 A OP2 U 6 ATOM A OP2 U 1 6 1.00 1 O 0.00 -8.008 -2.803 -6.934 A O5' U 6 ATOM A O5' U 1 6 1.00 1 O 0.00 -9.071 -1.979 -6.441 A C5' U 6 ATOM A C5' U 1 6 1.00 1 C 0.00 -8.573 -0.662 -5.831 A C4' U 6 ATOM A C4' U 1 6 1.00 1 C 0.00 -7.618 -0.856 -4.763 A O4' U 6 ATOM A O4' U 1 6 1.00 1 O 0.00 -7.869 0.194 -6.859 A C3' U 6 ATOM A C3' U 1 6 1.00 1 C 0.00 -8.768 1.065 -7.552 A O3' U 6 ATOM A O3' U 1 6 1.00 1 O 0.00 -6.845 0.951 -6.095 A C2' U 6 ATOM A C2' U 1 6 1.00 1 C 0.00 -7.190 2.320 -5.913 A O2' U 6 ATOM A O2' U 1 6 1.00 1 O 0.00 -6.697 0.267 -4.779 A C1' U 6 ATOM A C1' U 1 6 1.00 1 C 0.00 -5.292 -0.128 -4.619 A N1 U 6 ATOM A N1 U 1 6 1.00 1 N 0.00 -4.446 0.780 -4.014 A C2 U 6 ATOM A C2 U 1 6 1.00 1 C 0.00 -4.847 1.851 -3.564 A O2 U 6 ATOM A O2 U 1 6 1.00 1 O 0.00 -3.121 0.419 -3.944 A N3 U 6 ATOM A N3 U 1 6 1.00 1 N 0.00 -2.570 -0.760 -4.412 A C4 U 6 ATOM A C4 U 1 6 1.00 1 C 0.00 -1.366 -0.975 -4.295 A O4 U 6 ATOM A O4 U 1 6 1.00 1 O 0.00 -3.530 -1.653 -5.025 A C5 U 6 ATOM A C5 U 1 6 1.00 1 C 0.00 -4.838 -1.308 -5.112 A C6 U 6 ATOM A C6 U 1 6 1.00 1 C 0.00 -8.313 1.785 -8.922 A P G 7 ATOM A P G 1 7 1.00 1 P 0.00 -9.486 2.498 -9.477 A OP1 G 7 ATOM A OP1 G 1 7 1.00 1 O 0.00 -7.601 0.788 -9.753 A OP2 G 7 ATOM A OP2 G 1 7 1.00 1 O 0.00 -7.237 2.886 -8.422 A O5' G 7 ATOM A O5' G 1 7 1.00 1 O 0.00 -7.672 4.167 -7.937 A C5' G 7 ATOM A C5' G 1 7 1.00 1 C 0.00 -6.502 5.086 -7.571 A C4' G 7 ATOM A C4' G 1 7 1.00 1 C 0.00 -5.678 4.519 -6.530 A O4' G 7 ATOM A O4' G 1 7 1.00 1 O 0.00 -5.599 5.335 -8.763 A C3' G 7 ATOM A C3' G 1 7 1.00 1 C 0.00 -5.935 6.562 -9.435 A O3' G 7 ATOM A O3' G 1 7 1.00 1 O 0.00 -4.202 5.392 -8.188 A C2' G 7 ATOM A C2' G 1 7 1.00 1 C 0.00 -3.680 6.722 -8.194 A O2' G 7 ATOM A O2' G 1 7 1.00 1 O 0.00 -4.301 4.878 -6.776 A C1' G 7 ATOM A C1' G 1 7 1.00 1 C 0.00 -3.387 3.742 -6.630 A N9 G 7 ATOM A N9 G 1 7 1.00 1 N 0.00 -3.600 2.420 -6.799 A C8 G 7 ATOM A C8 G 1 7 1.00 1 C 0.00 -2.589 1.626 -6.643 A N7 G 7 ATOM A N7 G 1 7 1.00 1 N 0.00 -1.565 2.536 -6.340 A C5 G 7 ATOM A C5 G 1 7 1.00 1 C 0.00 -0.186 2.317 -6.062 A C6 G 7 ATOM A C6 G 1 7 1.00 1 C 0.00 0.426 1.251 -5.992 A O6 G 7 ATOM A O6 G 1 7 1.00 1 O 0.00 0.479 3.514 -5.823 A N1 G 7 ATOM A N1 G 1 7 1.00 1 N 0.00 -0.107 4.767 -5.844 A C2 G 7 ATOM A C2 G 1 7 1.00 1 C 0.00 0.678 5.810 -5.612 A N2 G 7 ATOM A N2 G 1 7 1.00 1 N 0.00 -1.391 4.974 -6.095 A N3 G 7 ATOM A N3 G 1 7 1.00 1 N 0.00 -2.057 3.828 -6.334 A C4 G 7 ATOM A C4 G 1 7 1.00 1 C 0.00 -5.404 6.851 -10.934 A P A 8 ATOM A P A 1 8 1.00 1 P 0.00 -6.395 7.713 -11.618 A OP1 A 8 ATOM A OP1 A 1 8 1.00 1 O 0.00 -5.017 5.558 -11.540 A OP2 A 8 ATOM A OP2 A 1 8 1.00 1 O 0.00 -4.061 7.716 -10.696 A O5' A 8 ATOM A O5' A 1 8 1.00 1 O 0.00 -4.106 9.150 -10.688 A C5' A 8 ATOM A C5' A 1 8 1.00 1 C 0.00 -2.717 9.770 -10.499 A C4' A 8 ATOM A C4' A 1 8 1.00 1 C 0.00 -2.075 9.254 -9.307 A O4' A 8 ATOM A O4' A 1 8 1.00 1 O 0.00 -1.788 9.448 -11.662 A C3' A 8 ATOM A C3' A 1 8 1.00 1 C 0.00 -1.775 10.455 -12.684 A O3' A 8 ATOM A O3' A 1 8 1.00 1 O 0.00 -0.440 9.317 -11.016 A C2' A 8 ATOM A C2' A 1 8 1.00 1 C 0.00 0.253 10.568 -10.979 A O2' A 8 ATOM A O2' A 1 8 1.00 1 O 0.00 -0.725 8.842 -9.637 A C1' A 8 ATOM A C1' A 1 8 1.00 1 C 0.00 -0.568 7.379 -9.572 A N9 A 8 ATOM A N9 A 1 8 1.00 1 N 0.00 -1.477 6.406 -9.812 A C8 A 8 ATOM A C8 A 1 8 1.00 1 C 0.00 -1.084 5.184 -9.703 A N7 A 8 ATOM A N7 A 1 8 1.00 1 N 0.00 0.259 5.352 -9.347 A C5 A 8 ATOM A C5 A 1 8 1.00 1 C 0.00 1.278 4.443 -9.072 A C6 A 8 ATOM A C6 A 1 8 1.00 1 C 0.00 1.090 3.132 -9.116 A N6 A 8 ATOM A N6 A 1 8 1.00 1 N 0.00 2.492 4.937 -8.749 A N1 A 8 ATOM A N1 A 1 8 1.00 1 N 0.00 2.685 6.257 -8.700 A C2 A 8 ATOM A C2 A 1 8 1.00 1 C 0.00 1.787 7.209 -8.947 A N3 A 8 ATOM A N3 A 1 8 1.00 1 N 0.00 0.583 6.683 -9.265 A C4 A 8 ATOM A C4 A 1 8 1.00 1 C 0.00 -1.210 10.084 -14.155 A P C 9 ATOM A P C 1 9 1.00 1 P 0.00 -0.983 11.342 -14.903 A OP1 C 9 ATOM A OP1 C 1 9 1.00 1 O 0.00 -2.079 9.034 -14.730 A OP2 C 9 ATOM A OP2 C 1 9 1.00 1 O 0.00 0.232 9.420 -13.833 A O5' C 9 ATOM A O5' C 1 9 1.00 1 O 0.00 1.308 10.241 -13.368 A C5' C 9 ATOM A C5' C 1 9 1.00 1 C 0.00 2.559 9.440 -12.975 A C4' C 9 ATOM A C4' C 1 9 1.00 1 C 0.00 2.303 8.417 -11.986 A O4' C 9 ATOM A O4' C 1 9 1.00 1 O 0.00 3.174 8.719 -14.151 A C3' C 9 ATOM A C3' C 1 9 1.00 1 C 0.00 3.990 9.592 -14.944 A O3' C 9 ATOM A O3' C 1 9 1.00 1 O 0.00 3.979 7.619 -13.496 A C2' C 9 ATOM A C2' C 1 9 1.00 1 C 0.00 5.306 8.065 -13.184 A O2' C 9 ATOM A O2' C 1 9 1.00 1 O 0.00 3.214 7.304 -12.228 A C1' C 9 ATOM A C1' C 1 9 1.00 1 C 0.00 2.489 6.021 -12.366 A N1 C 9 ATOM A N1 C 1 9 1.00 1 N 0.00 3.177 4.862 -12.031 A C2 C 9 ATOM A C2 C 1 9 1.00 1 C 0.00 4.338 4.925 -11.633 A O2 C 9 ATOM A O2 C 1 9 1.00 1 O 0.00 2.537 3.669 -12.153 A N3 C 9 ATOM A N3 C 1 9 1.00 1 N 0.00 1.270 3.605 -12.582 A C4 C 9 ATOM A C4 C 1 9 1.00 1 C 0.00 0.688 2.405 -12.699 A N4 C 9 ATOM A N4 C 1 9 1.00 1 N 0.00 0.549 4.801 -12.927 A C5 C 9 ATOM A C5 C 1 9 1.00 1 C 0.00 1.198 5.980 -12.809 A C6 C 9 ATOM A C6 C 1 9 1.00 1 C 0.00 6.939 -5.051 -9.058 B O5' OMG 10 HETATM B O5' OMG 2 1 1.00 1 O 0.00 8.370 -5.095 -9.064 B C5' OMG 10 HETATM B C5' OMG 2 1 1.00 1 C 0.00 8.980 -3.736 -9.381 B C4' OMG 10 HETATM B C4' OMG 2 1 1.00 1 C 0.00 8.592 -3.289 -10.698 B O4' OMG 10 HETATM B O4' OMG 2 1 1.00 1 O 0.00 8.507 -2.681 -8.401 B C3' OMG 10 HETATM B C3' OMG 2 1 1.00 1 C 0.00 9.397 -2.518 -7.291 B O3' OMG 10 HETATM B O3' OMG 2 1 1.00 1 O 0.00 8.427 -1.421 -9.230 B C2' OMG 10 HETATM B C2' OMG 2 1 1.00 1 C 0.00 9.636 -0.649 -9.133 B O2' OMG 10 HETATM B O2' OMG 2 1 1.00 1 O 0.00 9.442 0.539 -9.825 B CM2 OMG 10 HETATM B CM2 OMG 2 1 1.00 1 C 0.00 8.220 -1.892 -10.643 B C1' OMG 10 HETATM B C1' OMG 2 1 1.00 1 C 0.00 6.817 -1.684 -11.050 B N9 OMG 10 HETATM B N9 OMG 2 1 1.00 1 N 0.00 5.859 -2.590 -11.353 B C8 OMG 10 HETATM B C8 OMG 2 1 1.00 1 C 0.00 4.692 -2.142 -11.683 B N7 OMG 10 HETATM B N7 OMG 2 1 1.00 1 N 0.00 4.881 -0.759 -11.593 B C5 OMG 10 HETATM B C5 OMG 2 1 1.00 1 C 0.00 3.969 0.309 -11.835 B C6 OMG 10 HETATM B C6 OMG 2 1 1.00 1 C 0.00 2.794 0.251 -12.192 B O6 OMG 10 HETATM B O6 OMG 2 1 1.00 1 O 0.00 4.566 1.544 -11.628 B N1 OMG 10 HETATM B N1 OMG 2 1 1.00 1 N 0.00 5.874 1.737 -11.239 B C2 OMG 10 HETATM B C2 OMG 2 1 1.00 1 C 0.00 6.268 2.996 -11.089 B N2 OMG 10 HETATM B N2 OMG 2 1 1.00 1 N 0.00 6.736 0.744 -11.011 B N3 OMG 10 HETATM B N3 OMG 2 1 1.00 1 N 0.00 6.180 -0.471 -11.205 B C4 OMG 10 HETATM B C4 OMG 2 1 1.00 1 C 0.00 7.470 3.202 -7.830 B N1 OMU 11 HETATM B N1 OMU 2 2 1.00 1 N 0.00 6.607 4.269 -8.020 B C2 OMU 11 HETATM B C2 OMU 2 2 1.00 1 C 0.00 5.285 3.947 -8.243 B N3 OMU 11 HETATM B N3 OMU 2 2 1.00 1 N 0.00 4.756 2.676 -8.289 B C4 OMU 11 HETATM B C4 OMU 2 2 1.00 1 C 0.00 5.705 1.627 -8.079 B C5 OMU 11 HETATM B C5 OMU 2 2 1.00 1 C 0.00 7.022 1.909 -7.861 B C6 OMU 11 HETATM B C6 OMU 2 2 1.00 1 C 0.00 6.986 5.434 -7.976 B O2 OMU 11 HETATM B O2 OMU 2 2 1.00 1 O 0.00 3.574 2.502 -8.502 B O4 OMU 11 HETATM B O4 OMU 2 2 1.00 1 O 0.00 8.899 3.514 -7.586 B C1' OMU 11 HETATM B C1' OMU 2 2 1.00 1 C 0.00 9.131 3.855 -6.150 B C2' OMU 11 HETATM B C2' OMU 2 2 1.00 1 C 0.00 10.128 4.886 -6.019 B O2' OMU 11 HETATM B O2' OMU 2 2 1.00 1 O 0.00 9.544 6.110 -6.309 B CM2 OMU 11 HETATM B CM2 OMU 2 2 1.00 1 C 0.00 9.606 2.570 -5.553 B C3' OMU 11 HETATM B C3' OMU 2 2 1.00 1 C 0.00 10.384 1.938 -6.681 B C4' OMU 11 HETATM B C4' OMU 2 2 1.00 1 C 0.00 10.405 2.773 -4.384 B O3' OMU 11 HETATM B O3' OMU 2 2 1.00 1 O 0.00 9.751 2.385 -7.899 B O4' OMU 11 HETATM B O4' OMU 2 2 1.00 1 O 0.00 10.407 0.413 -6.568 B C5' OMU 11 HETATM B C5' OMU 2 2 1.00 1 C 0.00 9.096 -0.149 -6.455 B O5' OMU 11 HETATM B O5' OMU 2 2 1.00 1 O 0.00 8.918 -1.684 -5.990 B P OMU 11 HETATM B P OMU 2 2 1.00 1 P 0.00 9.880 -1.952 -4.897 B OP1 OMU 11 HETATM B OP1 OMU 2 2 1.00 1 O 0.00 7.473 -1.937 -5.779 B OP2 OMU 11 HETATM B OP2 OMU 2 2 1.00 1 O 0.00 5.078 3.968 -5.012 B N1 OMC 12 HETATM B N1 OMC 2 3 1.00 1 N 0.00 3.779 3.891 -5.473 B C2 OMC 12 HETATM B C2 OMC 2 3 1.00 1 C 0.00 3.212 2.670 -5.611 B N3 OMC 12 HETATM B N3 OMC 2 3 1.00 1 N 0.00 3.890 1.564 -5.312 B C4 OMC 12 HETATM B C4 OMC 2 3 1.00 1 C 0.00 5.236 1.632 -4.832 B C5 OMC 12 HETATM B C5 OMC 2 3 1.00 1 C 0.00 5.786 2.853 -4.691 B C6 OMC 12 HETATM B C6 OMC 2 3 1.00 1 C 0.00 3.157 4.913 -5.722 B O2 OMC 12 HETATM B O2 OMC 2 3 1.00 1 O 0.00 3.299 0.386 -5.476 B N4 OMC 12 HETATM B N4 OMC 2 3 1.00 1 N 0.00 5.648 5.312 -4.828 B C1' OMC 12 HETATM B C1' OMC 2 3 1.00 1 C 0.00 5.254 5.798 -3.471 B C2' OMC 12 HETATM B C2' OMC 2 3 1.00 1 C 0.00 4.742 7.138 -3.519 B O2' OMC 12 HETATM B O2' OMC 2 3 1.00 1 O 0.00 3.416 7.070 -3.903 B CM2 OMC 12 HETATM B CM2 OMC 2 3 1.00 1 C 0.00 6.491 5.709 -2.647 B C3' OMC 12 HETATM B C3' OMC 2 3 1.00 1 C 0.00 7.609 5.827 -3.655 B C4' OMC 12 HETATM B C4' OMC 2 3 1.00 1 C 0.00 7.093 5.303 -4.893 B O4' OMC 12 HETATM B O4' OMC 2 3 1.00 1 O 0.00 6.534 6.739 -1.648 B O3' OMC 12 HETATM B O3' OMC 2 3 1.00 1 O 0.00 8.854 5.071 -3.189 B C5' OMC 12 HETATM B C5' OMC 2 3 1.00 1 C 0.00 8.567 3.688 -2.945 B O5' OMC 12 HETATM B O5' OMC 2 3 1.00 1 O 0.00 9.743 2.586 -2.929 B P OMC 12 HETATM B P OMC 2 3 1.00 1 P 0.00 10.739 2.977 -1.905 B OP1 OMC 12 HETATM B OP1 OMC 2 3 1.00 1 O 0.00 9.115 1.246 -2.880 B OP2 OMC 12 HETATM B OP2 OMC 2 3 1.00 1 O 0.00 5.766 6.548 -0.238 B P DA 13 ATOM B P DA 2 4 1.00 1 P 0.00 6.292 7.552 0.714 B OP1 DA 13 ATOM B OP1 DA 2 4 1.00 1 O 0.00 5.806 5.110 0.111 B OP2 DA 13 ATOM B OP2 DA 2 4 1.00 1 O 0.00 4.230 6.934 -0.580 B O5' DA 13 ATOM B O5' DA 2 4 1.00 1 O 0.00 3.777 8.292 -0.473 B C5' DA 13 ATOM B C5' DA 2 4 1.00 1 C 0.00 2.256 8.429 -0.655 B C4' DA 13 ATOM B C4' DA 2 4 1.00 1 C 0.00 1.804 7.779 -1.862 B O4' DA 13 ATOM B O4' DA 2 4 1.00 1 O 0.00 1.474 7.815 0.490 B C3' DA 13 ATOM B C3' DA 2 4 1.00 1 C 0.00 1.226 8.772 1.531 B O3' DA 13 ATOM B O3' DA 2 4 1.00 1 O 0.00 0.176 7.398 -0.181 B C2' DA 13 ATOM B C2' DA 2 4 1.00 1 C 0.00 0.548 7.108 -1.606 B C1' DA 13 ATOM B C1' DA 2 4 1.00 1 C 0.00 0.669 5.657 -1.851 B N9 DA 13 ATOM B N9 DA 2 4 1.00 1 N 0.00 1.787 4.899 -1.878 B C8 DA 13 ATOM B C8 DA 2 4 1.00 1 C 0.00 1.670 3.669 -2.232 B N7 DA 13 ATOM B N7 DA 2 4 1.00 1 N 0.00 0.299 3.574 -2.467 B C5 DA 13 ATOM B C5 DA 2 4 1.00 1 C 0.00 -0.505 2.515 -2.881 B C6 DA 13 ATOM B C6 DA 2 4 1.00 1 C 0.00 -0.008 1.318 -3.188 B N6 DA 13 ATOM B N6 DA 2 4 1.00 1 N 0.00 -1.824 2.748 -3.006 B N1 DA 13 ATOM B N1 DA 2 4 1.00 1 N 0.00 -2.325 3.961 -2.744 B C2 DA 13 ATOM B C2 DA 2 4 1.00 1 C 0.00 -1.647 5.042 -2.351 B N3 DA 13 ATOM B N3 DA 2 4 1.00 1 N 0.00 -0.327 4.777 -2.232 B C4 DA 13 ATOM B C4 DA 2 4 1.00 1 C 0.00 0.449 8.339 2.876 B P DT 14 ATOM B P DT 2 5 1.00 1 P 0.00 0.092 9.566 3.626 B OP1 DT 14 ATOM B OP1 DT 2 5 1.00 1 O 0.00 1.238 7.277 3.538 B OP2 DT 14 ATOM B OP2 DT 2 5 1.00 1 O 0.00 -0.902 7.673 2.299 B O5' DT 14 ATOM B O5' DT 2 5 1.00 1 O 0.00 -2.004 8.475 1.853 B C5' DT 14 ATOM B C5' DT 2 5 1.00 1 C 0.00 -3.261 7.631 1.706 B C4' DT 14 ATOM B C4' DT 2 5 1.00 1 C 0.00 -3.151 6.674 0.634 B O4' DT 14 ATOM B O4' DT 2 5 1.00 1 O 0.00 -3.497 6.847 2.970 B C3' DT 14 ATOM B C3' DT 2 5 1.00 1 C 0.00 -4.387 7.543 3.845 B O3' DT 14 ATOM B O3' DT 2 5 1.00 1 O 0.00 -4.096 5.534 2.491 B C2' DT 14 ATOM B C2' DT 2 5 1.00 1 C 0.00 -3.853 5.469 1.010 B C1' DT 14 ATOM B C1' DT 2 5 1.00 1 C 0.00 -3.069 4.271 0.705 B N1 DT 14 ATOM B N1 DT 2 5 1.00 1 N 0.00 -3.708 3.210 0.095 B C2 DT 14 ATOM B C2 DT 2 5 1.00 1 C 0.00 -4.900 3.242 -0.199 B O2 DT 14 ATOM B O2 DT 2 5 1.00 1 O 0.00 -2.931 2.096 -0.139 B N3 DT 14 ATOM B N3 DT 2 5 1.00 1 N 0.00 -1.594 1.954 0.175 B C4 DT 14 ATOM B C4 DT 2 5 1.00 1 C 0.00 -1.002 0.911 -0.087 B O4 DT 14 ATOM B O4 DT 2 5 1.00 1 O 0.00 -1.014 3.116 0.811 B C5 DT 14 ATOM B C5 DT 2 5 1.00 1 C 0.00 0.459 3.094 1.206 B C7 DT 14 ATOM B C7 DT 2 5 1.00 1 C 0.00 -1.761 4.215 1.054 B C6 DT 14 ATOM B C6 DT 2 5 1.00 1 C 0.00 -4.166 7.503 5.439 B P DC 15 ATOM B P DC 2 6 1.00 1 P 0.00 -5.025 8.546 6.043 B OP1 DC 15 ATOM B OP1 DC 2 6 1.00 1 O 0.00 -2.711 7.500 5.709 B OP2 DC 15 ATOM B OP2 DC 2 6 1.00 1 O 0.00 -4.756 6.057 5.844 B O5' DC 15 ATOM B O5' DC 2 6 1.00 1 O 0.00 -6.169 5.823 5.851 B C5' DC 15 ATOM B C5' DC 2 6 1.00 1 C 0.00 -6.500 4.339 5.711 B C4' DC 15 ATOM B C4' DC 2 6 1.00 1 C 0.00 -5.876 3.755 4.553 B O4' DC 15 ATOM B O4' DC 2 6 1.00 1 O 0.00 -6.024 3.549 6.900 B C3' DC 15 ATOM B C3' DC 2 6 1.00 1 C 0.00 -6.986 3.577 7.958 B O3' DC 15 ATOM B O3' DC 2 6 1.00 1 O 0.00 -5.885 2.164 6.315 B C2' DC 15 ATOM B C2' DC 2 6 1.00 1 C 0.00 -5.615 2.366 4.838 B C1' DC 15 ATOM B C1' DC 2 6 1.00 1 C 0.00 -4.227 1.987 4.489 B N1 DC 15 ATOM B N1 DC 2 6 1.00 1 N 0.00 -4.032 0.750 3.895 B C2 DC 15 ATOM B C2 DC 2 6 1.00 1 C 0.00 -4.975 -0.018 3.739 B O2 DC 15 ATOM B O2 DC 2 6 1.00 1 O 0.00 -2.774 0.410 3.509 B N3 DC 15 ATOM B N3 DC 2 6 1.00 1 N 0.00 -1.751 1.247 3.695 B C4 DC 15 ATOM B C4 DC 2 6 1.00 1 C 0.00 -0.537 0.897 3.272 B N4 DC 15 ATOM B N4 DC 2 6 1.00 1 N 0.00 -1.950 2.519 4.318 B C5 DC 15 ATOM B C5 DC 2 6 1.00 1 C 0.00 -3.186 2.843 4.693 B C6 DC 15 ATOM B C6 DC 2 6 1.00 1 C 0.00 -6.546 3.259 9.473 B P DT 16 ATOM B P DT 2 7 1.00 1 P 0.00 -7.508 3.919 10.380 B OP1 DT 16 ATOM B OP1 DT 2 7 1.00 1 O 0.00 -5.095 3.529 9.605 B OP2 DT 16 ATOM B OP2 DT 2 7 1.00 1 O 0.00 -6.768 1.669 9.575 B O5' DT 16 ATOM B O5' DT 2 7 1.00 1 O 0.00 -8.084 1.110 9.485 B C5' DT 16 ATOM B C5' DT 2 7 1.00 1 C 0.00 -8.034 -0.409 9.371 B C4' DT 16 ATOM B C4' DT 2 7 1.00 1 C 0.00 -7.344 -0.802 8.167 B O4' DT 16 ATOM B O4' DT 2 7 1.00 1 O 0.00 -7.291 -1.007 10.555 B C3' DT 16 ATOM B C3' DT 2 7 1.00 1 C 0.00 -8.179 -1.627 11.499 B O3' DT 16 ATOM B O3' DT 2 7 1.00 1 O 0.00 -6.343 -2.027 9.949 B C2' DT 16 ATOM B C2' DT 2 7 1.00 1 C 0.00 -6.346 -1.798 8.466 B C1' DT 16 ATOM B C1' DT 2 7 1.00 1 C 0.00 -5.005 -1.361 8.043 B N1 DT 16 ATOM B N1 DT 2 7 1.00 1 N 0.00 -4.195 -2.284 7.412 B C2 DT 16 ATOM B C2 DT 2 7 1.00 1 C 0.00 -4.558 -3.435 7.187 B O2 DT 16 ATOM B O2 DT 2 7 1.00 1 O 0.00 -2.936 -1.843 7.064 B N3 DT 16 ATOM B N3 DT 2 7 1.00 1 N 0.00 -2.422 -0.578 7.284 B C4 DT 16 ATOM B C4 DT 2 7 1.00 1 C 0.00 -1.283 -0.294 6.919 B O4 DT 16 ATOM B O4 DT 2 7 1.00 1 O 0.00 -3.340 0.321 7.949 B C5 DT 16 ATOM B C5 DT 2 7 1.00 1 C 0.00 -2.914 1.760 8.232 B C7 DT 16 ATOM B C7 DT 2 7 1.00 1 C 0.00 -4.576 -0.090 8.305 B C6 DT 16 ATOM B C6 DT 2 7 1.00 1 C 0.00 -3.875 -4.537 10.799 B N1 OMC 17 HETATM B N1 OMC 2 8 1.00 1 N 0.00 -2.601 -4.635 10.262 B C2 OMC 17 HETATM B C2 OMC 2 8 1.00 1 C 0.00 -1.643 -3.779 10.695 B N3 OMC 17 HETATM B N3 OMC 2 8 1.00 1 N 0.00 -1.908 -2.856 11.619 B C4 OMC 17 HETATM B C4 OMC 2 8 1.00 1 C 0.00 -3.218 -2.745 12.194 B C5 OMC 17 HETATM B C5 OMC 2 8 1.00 1 C 0.00 -4.168 -3.607 11.763 B C6 OMC 17 HETATM B C6 OMC 2 8 1.00 1 C 0.00 -2.352 -5.487 9.417 B O2 OMC 17 HETATM B O2 OMC 2 8 1.00 1 O 0.00 -0.932 -2.029 11.990 B N4 OMC 17 HETATM B N4 OMC 2 8 1.00 1 N 0.00 -4.914 -5.423 10.206 B C1' OMC 17 HETATM B C1' OMC 2 8 1.00 1 C 0.00 -4.995 -6.736 10.926 B C2' OMC 17 HETATM B C2' OMC 2 8 1.00 1 C 0.00 -5.345 -7.794 10.008 B O2' OMC 17 HETATM B O2' OMC 2 8 1.00 1 O 0.00 -4.196 -8.220 9.366 B CM2 OMC 17 HETATM B CM2 OMC 2 8 1.00 1 C 0.00 -6.108 -6.523 11.924 B C3' OMC 17 HETATM B C3' OMC 2 8 1.00 1 C 0.00 -7.055 -5.581 11.192 B C4' OMC 17 HETATM B C4' OMC 2 8 1.00 1 C 0.00 -6.236 -4.829 10.260 B O4' OMC 17 HETATM B O4' OMC 2 8 1.00 1 O 0.00 -6.738 -7.759 12.283 B O3' OMC 17 HETATM B O3' OMC 2 8 1.00 1 O 0.00 -7.800 -4.644 12.145 B C5' OMC 17 HETATM B C5' OMC 2 8 1.00 1 C 0.00 -6.975 -3.565 12.595 B O5' OMC 17 HETATM B O5' OMC 2 8 1.00 1 O 0.00 -7.630 -2.131 12.938 B P OMC 17 HETATM B P OMC 2 8 1.00 1 P 0.00 -8.793 -2.358 13.822 B OP1 OMC 17 HETATM B OP1 OMC 2 8 1.00 1 O 0.00 -6.542 -1.223 13.372 B OP2 OMC 17 HETATM B OP2 OMC 2 8 1.00 1 O 0.00 -1.229 -7.809 12.537 B N1 OMC 18 HETATM B N1 OMC 2 9 1.00 1 N 0.00 -0.053 -7.088 12.468 B C2 OMC 18 HETATM B C2 OMC 2 9 1.00 1 C 0.00 0.072 -5.986 13.235 B N3 OMC 18 HETATM B N3 OMC 2 9 1.00 1 N 0.00 -0.912 -5.592 14.038 B C4 OMC 18 HETATM B C4 OMC 2 9 1.00 1 C 0.00 -2.143 -6.321 14.117 B C5 OMC 18 HETATM B C5 OMC 2 9 1.00 1 C 0.00 -2.259 -7.421 13.348 B C6 OMC 18 HETATM B C6 OMC 2 9 1.00 1 C 0.00 0.846 -7.441 11.715 B O2 OMC 18 HETATM B O2 OMC 2 9 1.00 1 O 0.00 -0.738 -4.487 14.745 B N4 OMC 18 HETATM B N4 OMC 2 9 1.00 1 N 0.00 -1.295 -9.047 11.734 B C1' OMC 18 HETATM B C1' OMC 2 9 1.00 1 C 0.00 -0.983 -10.252 12.581 B C2' OMC 18 HETATM B C2' OMC 2 9 1.00 1 C 0.00 -0.130 -11.162 11.871 B O2' OMC 18 HETATM B O2' OMC 2 9 1.00 1 O 0.00 1.173 -10.990 12.301 B CM2 OMC 18 HETATM B CM2 OMC 2 9 1.00 1 C 0.00 -2.324 -10.894 12.855 B C3' OMC 18 HETATM B C3' OMC 2 9 1.00 1 C 0.00 -3.199 -10.442 11.702 B C4' OMC 18 HETATM B C4' OMC 2 9 1.00 1 C 0.00 -2.606 -9.237 11.162 B O4' OMC 18 HETATM B O4' OMC 2 9 1.00 1 O 0.00 -2.232 -12.329 12.896 B O3' OMC 18 HETATM B O3' OMC 2 9 1.00 1 O 0.00 -4.640 -10.219 12.155 B C5' OMC 18 HETATM B C5' OMC 2 9 1.00 1 C 0.00 -4.758 -9.127 13.068 B O5' OMC 18 HETATM B O5' OMC 2 9 1.00 1 O 0.00 -6.207 -8.605 13.552 B P OMC 18 HETATM B P OMC 2 9 1.00 1 P 0.00 -7.099 -9.774 13.731 B OP1 OMC 18 HETATM B OP1 OMC 2 9 1.00 1 O 0.00 -5.985 -7.670 14.676 B OP2 OMC 18 HETATM B OP2 OMC 2 9 1.00 1 O 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Nishizaki, T. Iwai, S. Ohtsuka, E. Nakamura, H. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C10 H14 N5 O7 P 347.221 y ADENOSINE-5'-MONOPHOSPHATE RNA linking C9 H14 N3 O8 P 323.197 y CYTIDINE-5'-MONOPHOSPHATE RNA linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O8 P 363.221 y GUANOSINE-5'-MONOPHOSPHATE RNA linking C10 H16 N3 O8 P 337.223 n O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE RNA linking C11 H16 N5 O8 P 377.247 n O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE RNA linking C10 H15 N2 O9 P 338.208 n O2'-METHYLURIDINE 5'-MONOPHOSPHATE RNA linking C9 H13 N2 O9 P 324.181 y URIDINE-5'-MONOPHOSPHATE RNA linking US Biochemistry BICHAW 0033 0006-2960 36 2577 2585 10.1021/bi962297c 9054564 Solution structure of an RNA.2'-O-methylated RNA hybrid duplex containing an RNA.DNA hybrid segment at the center. 1997 10.2210/pdb1nao/pdb pdb_00001nao 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 A SUBSTRATE OF RNASE H 2934.831 RNA (5'-R(*GP*GP*AP*GP*AP*UP*GP*AP*C)-3') 1 syn polymer A SUBSTRATE OF RNASE H 2802.865 DNA/RNA (5'-R(*OMGP*OMUP*OMC)-D(P*AP*TP*CP*T)-R(P*OMCP*OMC)-3') 1 syn polymer no no GGAGAUGAC GGAGAUGAC A polyribonucleotide no yes (OMG)(OMU)(OMC)(DA)(DT)(DC)(DT)(OMC)(OMC) GUCATCTCC B polydeoxyribonucleotide/polyribonucleotide hybrid n n n n n n n n n n n n n n n n n n -2.528 1 19 A 1 B 18 0.259 A_G1:OMC18_B 1 0.759 -0.633 -0.094 -0.327 -1.293 1 19 A 2 B 17 2.598 A_G2:OMC17_B 2 -12.662 -0.895 0.036 -0.376 0.589 1 20 A 3 B 16 -3.118 A_A3:DT16_B 3 0.971 -0.219 -0.326 -0.212 2.800 1 19 A 4 B 15 -0.586 A_G4:DC15_B 4 -5.671 -0.360 0.149 -0.267 -5.205 1 20 A 5 B 14 -3.545 A_A5:DT14_B 5 -5.529 0.057 -0.170 -0.123 8.351 1 20 A 6 B 13 -0.610 A_U6:DA13_B 6 -6.664 0.581 -0.225 -0.276 -6.473 1 19 A 7 B 12 6.064 A_G7:OMC12_B 7 -8.654 -1.023 -0.543 -0.395 2.847 1 20 A 8 B 11 -14.621 A_A8:OMU11_B 8 -4.469 1.480 -0.061 -0.158 6.487 1 19 A 9 B 10 2.063 A_C9:OMG10_B 9 0.254 0.684 -0.274 -0.140 3.687 41.487 A A 1 2 -4.571 B B 18 17 3.528 -3.227 -1.260 -0.522 AA_G1G2:OMC17OMC18_BB 1 -5.407 7.660 41.028 -0.356 1.141 3.752 41.262 A A 2 3 -23.597 B B 17 16 4.061 -16.207 -1.237 0.190 AA_G2A3:DT16OMC17_BB 2 -2.496 3.634 37.995 2.449 1.419 3.925 30.406 A A 3 4 18.620 B B 16 15 4.092 9.606 0.470 0.080 AA_A3G4:DC15DT16_BB 3 0.615 -1.191 28.877 -2.271 -0.740 3.406 43.590 A A 4 5 33.810 B B 15 14 3.812 23.815 -1.454 0.118 AA_G4A5:DT14DC15_BB 4 -3.769 5.352 36.588 -2.620 1.519 2.911 27.049 A A 5 6 -3.806 B B 14 13 2.851 -1.778 0.753 -1.575 AA_A5U6:DA13DT14_BB 5 -1.179 2.523 26.967 -2.969 -1.874 1.906 36.366 A A 6 7 34.320 B B 13 12 3.473 20.254 0.815 -1.759 AA_U6G7:OMC12DA13_BB 6 -2.073 3.512 30.293 -5.370 -1.568 3.132 44.543 A A 7 8 3.869 B B 12 11 3.018 2.929 -2.589 -0.567 AA_G7A8:OMU11OMC12_BB 7 -2.905 3.838 44.361 -1.002 3.164 3.717 28.593 A A 8 9 -7.517 B B 11 10 3.219 -3.693 2.319 -2.049 AA_A8C9:OMG10OMU11_BB 8 3.660 -7.450 28.126 -3.252 -3.808 database_2 pdbx_database_status pdbx_struct_assembly pdbx_struct_oper_list struct_conn repository Initial release Version format compliance Version format compliance Database references Derived calculations Other 1 0 1997-01-27 1 1 2008-03-10 1 2 2011-07-13 1 3 2022-02-23 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id Y BNL 1996-03-29 REL REL 00MM NACL, 50MM NA PHOSPHATE, 3MM EDTA AVERAGED 10 1 7.0 313 K simulated annealing BRUNGER refinement X-PLOR 3.1F 3.1F structure solution X-PLOR 600 Bruker AMX600 G 1 n 1 G 1 A G 2 n 2 G 2 A A 3 n 3 A 3 A G 4 n 4 G 4 A A 5 n 5 A 5 A U 6 n 6 U 6 A G 7 n 7 G 7 A A 8 n 8 A 8 A C 9 n 9 C 9 A OMG 10 n 1 OMG 10 B OMU 11 n 2 OMU 11 B OMC 12 n 3 OMC 12 B A 13 n 4 DA 13 B T 14 n 5 DT 14 B C 15 n 6 DC 15 B T 16 n 7 DT 16 B OMC 17 n 8 OMC 17 B OMC 18 n 9 OMC 18 B author_defined_assembly 2 dimeric B OMG 10 O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE B OMG 1 G B OMU 11 O2'-METHYLURIDINE 5'-MONOPHOSPHATE B OMU 2 U B OMC 12 O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE B OMC 3 C B OMC 17 O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE B OMC 8 C B OMC 18 O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE B OMC 9 C 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 5.17 0.80 101.50 106.67 A A A C3' C2' C1' G G G 1 1 1 N 1 4.37 0.50 113.10 117.47 A A A N7 C8 N9 G G G 1 1 1 N 1 -2.47 0.40 106.40 103.93 A A A C8 N9 C4 G G G 1 1 1 N 1 4.56 0.50 113.10 117.66 A A A N7 C8 N9 G G G 2 2 2 N 1 3.82 0.50 113.80 117.62 A A A N7 C8 N9 A A A 3 3 3 N 1 4.52 0.50 113.10 117.62 A A A N7 C8 N9 G G G 4 4 4 N 1 -2.59 0.40 106.40 103.81 A A A C8 N9 C4 G G G 4 4 4 N 1 4.25 0.50 113.80 118.05 A A A N7 C8 N9 A A A 5 5 5 N 1 5.28 0.80 101.50 106.78 A A A C3' C2' C1' U U U 6 6 6 N 1 4.93 0.70 108.50 113.43 A A A O4' C1' N1 U U U 6 6 6 N 1 4.94 0.80 101.50 106.44 A A A C3' C2' C1' G G G 7 7 7 N 1 4.43 0.50 113.10 117.53 A A A N7 C8 N9 G G G 7 7 7 N 1 3.73 0.50 113.80 117.53 A A A N7 C8 N9 A A A 8 8 8 N 1 2.51 0.30 108.30 110.81 B B B O4' C1' N9 DA DA DA 13 13 13 N 1 4.05 0.50 113.80 117.85 B B B N7 C8 N9 DA DA DA 13 13 13 N 1 3.31 0.30 108.30 111.61 B B B O4' C1' N1 DT DT DT 14 14 14 N 1 3.40 0.30 108.30 111.70 B B B O4' C1' N1 DC DC DC 15 15 15 N 1 3.16 0.30 108.30 111.46 B B B O4' C1' N1 DT DT DT 16 16 16 N model building X-PLOR 3.1 refinement X-PLOR 3.1 phasing X-PLOR 3.1 SOLUTION STRUCTURE OF AN RNA 2'-O-METHYLATED RNA DUPLEX CONTAINING AN RNA/DNA HYBRID SEGMENT AT THE CENTER, NMR, MINIMIZED AVERAGE STRUCTURE 1 N N 2 N N covale 1.618 both B OMG 10 B O3' OMG 1 1_555 B OMU 11 B P OMU 2 1_555 covale 1.609 both B OMU 11 B O3' OMU 2 1_555 B OMC 12 B P OMC 3 1_555 covale 1.617 both B OMC 12 B O3' OMC 3 1_555 B DA 13 B P DA 4 1_555 covale 1.621 both B DT 16 B O3' DT 7 1_555 B OMC 17 B P OMC 8 1_555 covale 1.615 both B OMC 17 B O3' OMC 8 1_555 B OMC 18 B P OMC 9 1_555 hydrog WATSON-CRICK A G 1 A N1 G 1 1_555 B OMC 18 B N3 OMC 9 1_555 hydrog WATSON-CRICK A G 1 A N2 G 1 1_555 B OMC 18 B O2 OMC 9 1_555 hydrog WATSON-CRICK A G 1 A O6 G 1 1_555 B OMC 18 B N4 OMC 9 1_555 hydrog WATSON-CRICK A G 2 A N1 G 2 1_555 B OMC 17 B N3 OMC 8 1_555 hydrog WATSON-CRICK A G 2 A N2 G 2 1_555 B OMC 17 B O2 OMC 8 1_555 hydrog WATSON-CRICK A G 2 A O6 G 2 1_555 B OMC 17 B N4 OMC 8 1_555 hydrog WATSON-CRICK A A 3 A N1 A 3 1_555 B DT 16 B N3 DT 7 1_555 hydrog WATSON-CRICK A A 3 A N6 A 3 1_555 B DT 16 B O4 DT 7 1_555 hydrog WATSON-CRICK A G 4 A N1 G 4 1_555 B DC 15 B N3 DC 6 1_555 hydrog WATSON-CRICK A G 4 A N2 G 4 1_555 B DC 15 B O2 DC 6 1_555 hydrog WATSON-CRICK A G 4 A O6 G 4 1_555 B DC 15 B N4 DC 6 1_555 hydrog WATSON-CRICK A A 5 A N1 A 5 1_555 B DT 14 B N3 DT 5 1_555 hydrog WATSON-CRICK A A 5 A N6 A 5 1_555 B DT 14 B O4 DT 5 1_555 hydrog WATSON-CRICK A U 6 A N3 U 6 1_555 B DA 13 B N1 DA 4 1_555 hydrog WATSON-CRICK A U 6 A O4 U 6 1_555 B DA 13 B N6 DA 4 1_555 hydrog WATSON-CRICK A G 7 A N1 G 7 1_555 B OMC 12 B N3 OMC 3 1_555 hydrog WATSON-CRICK A G 7 A N2 G 7 1_555 B OMC 12 B O2 OMC 3 1_555 hydrog WATSON-CRICK A G 7 A O6 G 7 1_555 B OMC 12 B N4 OMC 3 1_555 hydrog WATSON-CRICK A A 8 A N1 A 8 1_555 B OMU 11 B N3 OMU 2 1_555 hydrog WATSON-CRICK A A 8 A N6 A 8 1_555 B OMU 11 B O4 OMU 2 1_555 hydrog WATSON-CRICK A C 9 A N3 C 9 1_555 B OMG 10 B N1 OMG 1 1_555 hydrog WATSON-CRICK A C 9 A N4 C 9 1_555 B OMG 10 B O6 OMG 1 1_555 hydrog WATSON-CRICK A C 9 A O2 C 9 1_555 B OMG 10 B N2 OMG 1 1_555 DNA-RNA HYBRID DNA/RNA DUPLEX, DNA-RNA HYBRID 1NAO PDB 1 1NAO 1NAO PDB 2 1NAO 1 9 1NAO 1 9 1NAO A 1 1 9 10 18 1NAO 10 18 1NAO B 2 1 9 1 P 1