0.017094 0.000000 0.000000 0.000000 0.017094 0.000000 0.000000 0.000000 0.011710 0.00000 0.00000 0.00000 Madhusudan Zapf, J. Hoch, J.A. Whiteley, J.M. Xuong, N.H. Varughese, K.I. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 58.500 58.500 85.400 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 147 N N N 148 S C N 149 N C N 150 N O N 151 S C N 152 N C N 153 N C N 154 N C N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N N N 170 S C N 171 N C N 172 N O N 173 N C N 174 N C N 175 N C N 176 N C N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 S C N 193 N C N 194 N O N 195 N C N 196 N C N 197 N C N 198 N C N 199 N N N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N N N 217 S C N 218 N C N 219 N O N 220 N C N 221 N C N 222 N S N 223 N C N 224 N O N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N N N 237 S C N 238 N C N 239 N O N 240 N C Y 241 N C Y 242 N C Y 243 N C Y 244 N C Y 245 N C Y 246 N C N 247 N O N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N N N 260 S C N 261 N C N 262 N O N 263 N C N 264 N C N 265 N C N 266 N O N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N N N 277 S C N 278 N C N 279 N O N 280 N C N 281 N O N 282 N O N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 R C N 295 N O N 296 N C N 297 N O N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N N N 308 S C N 309 N C N 310 N O N 311 N C Y 312 N C Y 313 N C Y 314 N C Y 315 N C Y 316 N C Y 317 N C N 318 N O N 319 N O N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N N N 332 S C N 333 N C N 334 N O N 335 N C N 336 N C N 337 N C N 338 N O N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing Y 235 N doub Y 236 N sing Y 237 N sing N 238 N sing Y 239 N doub N 240 N sing Y 241 N doub N 242 N sing Y 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N doub N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N doub N 300 N sing N 301 N sing N 302 N sing N 303 N sing Y 304 N doub Y 305 N sing Y 306 N sing N 307 N sing Y 308 N doub N 309 N sing Y 310 N doub N 311 N sing Y 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N doub N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing US Biochemistry BICHAW 0033 0006-2960 36 12739 12745 10.1021/bi971276v 9335530 A response regulatory protein with the site of phosphorylation blocked by an arginine interaction: crystal structure of Spo0F from Bacillus subtilis. 1997 10.2210/pdb1nat/pdb pdb_00001nat 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 300 1 AREA DETECTOR 1991-09 XUONG-HAMLIN MULTIWIRE GRAPHITE(002) M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RUH2R 14244.660 SPORULATION RESPONSE REGULATORY PROTEIN 1 man polymer 18.015 water 20 nat water SPO0F no no MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Bacillus Escherichia sample SPO0F 1423 Bacillus subtilis SPO0F 562 Escherichia coli T7 PROMOTER PET20B 1 2.56 50. 7.8 pH 7.8 chem_comp_atom chem_comp_bond database_2 pdbx_database_status pdbx_initial_refinement_model repository Initial release Version format compliance Version format compliance Data collection Database references Other Refinement description 1 0 1998-10-14 1 1 2008-03-24 1 2 2011-07-13 1 3 2024-02-14 1 4 2024-04-03 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site Y BNL 1997-09-09 REL HOH water Madhusudan et al (1996) Acta Cryst. D, 52, 598-590. Other experimental model HOH 131 2 HOH HOH 131 A HOH 132 2 HOH HOH 132 A HOH 133 2 HOH HOH 133 A HOH 134 2 HOH HOH 134 A HOH 135 2 HOH HOH 135 A HOH 136 2 HOH HOH 136 A HOH 137 2 HOH HOH 137 A HOH 138 2 HOH HOH 138 A HOH 139 2 HOH HOH 139 A HOH 140 2 HOH HOH 140 A HOH 141 2 HOH HOH 141 A HOH 142 2 HOH HOH 142 A HOH 143 2 HOH HOH 143 A HOH 144 2 HOH HOH 144 A HOH 145 2 HOH HOH 145 A HOH 146 2 HOH HOH 146 A HOH 147 2 HOH HOH 147 A HOH 148 2 HOH HOH 148 A HOH 149 2 HOH HOH 149 A HOH 150 2 HOH HOH 150 A n 1 1 A n 2 2 A ASN 3 n 3 ASN 3 A GLU 4 n 4 GLU 4 A LYS 5 n 5 LYS 5 A ILE 6 n 6 ILE 6 A LEU 7 n 7 LEU 7 A ILE 8 n 8 ILE 8 A VAL 9 n 9 VAL 9 A ASP 10 n 10 ASP 10 A ASP 11 n 11 ASP 11 A GLN 12 n 12 GLN 12 A TYR 13 n 13 TYR 13 A GLY 14 n 14 GLY 14 A ILE 15 n 15 ILE 15 A ARG 16 n 16 ARG 16 A ILE 17 n 17 ILE 17 A LEU 18 n 18 LEU 18 A LEU 19 n 19 LEU 19 A ASN 20 n 20 ASN 20 A GLU 21 n 21 GLU 21 A VAL 22 n 22 VAL 22 A PHE 23 n 23 PHE 23 A ASN 24 n 24 ASN 24 A LYS 25 n 25 LYS 25 A GLU 26 n 26 GLU 26 A GLY 27 n 27 GLY 27 A TYR 28 n 28 TYR 28 A GLN 29 n 29 GLN 29 A THR 30 n 30 THR 30 A PHE 31 n 31 PHE 31 A GLN 32 n 32 GLN 32 A ALA 33 n 33 ALA 33 A ALA 34 n 34 ALA 34 A ASN 35 n 35 ASN 35 A GLY 36 n 36 GLY 36 A LEU 37 n 37 LEU 37 A GLN 38 n 38 GLN 38 A ALA 39 n 39 ALA 39 A LEU 40 n 40 LEU 40 A ASP 41 n 41 ASP 41 A ILE 42 n 42 ILE 42 A VAL 43 n 43 VAL 43 A THR 44 n 44 THR 44 A LYS 45 n 45 LYS 45 A GLU 46 n 46 GLU 46 A ARG 47 n 47 ARG 47 A PRO 48 n 48 PRO 48 A ASP 49 n 49 ASP 49 A LEU 50 n 50 LEU 50 A VAL 51 n 51 VAL 51 A LEU 52 n 52 LEU 52 A LEU 53 n 53 LEU 53 A ASP 54 n 54 ASP 54 A MET 55 n 55 MET 55 A LYS 56 n 56 LYS 56 A ILE 57 n 57 ILE 57 A PRO 58 n 58 PRO 58 A GLY 59 n 59 GLY 59 A MET 60 n 60 MET 60 A ASP 61 n 61 ASP 61 A GLY 62 n 62 GLY 62 A ILE 63 n 63 ILE 63 A GLU 64 n 64 GLU 64 A ILE 65 n 65 ILE 65 A LEU 66 n 66 LEU 66 A LYS 67 n 67 LYS 67 A ARG 68 n 68 ARG 68 A MET 69 n 69 MET 69 A LYS 70 n 70 LYS 70 A VAL 71 n 71 VAL 71 A ILE 72 n 72 ILE 72 A ASP 73 n 73 ASP 73 A GLU 74 n 74 GLU 74 A ASN 75 n 75 ASN 75 A ILE 76 n 76 ILE 76 A ARG 77 n 77 ARG 77 A VAL 78 n 78 VAL 78 A ILE 79 n 79 ILE 79 A ILE 80 n 80 ILE 80 A MET 81 n 81 MET 81 A THR 82 n 82 THR 82 A ALA 83 n 83 ALA 83 A TYR 84 n 84 TYR 84 A GLY 85 n 85 GLY 85 A GLU 86 n 86 GLU 86 A LEU 87 n 87 LEU 87 A ASP 88 n 88 ASP 88 A MET 89 n 89 MET 89 A ILE 90 n 90 ILE 90 A GLN 91 n 91 GLN 91 A GLU 92 n 92 GLU 92 A SER 93 n 93 SER 93 A LYS 94 n 94 LYS 94 A GLU 95 n 95 GLU 95 A LEU 96 n 96 LEU 96 A GLY 97 n 97 GLY 97 A ALA 98 n 98 ALA 98 A LEU 99 n 99 LEU 99 A THR 100 n 100 THR 100 A HIS 101 n 101 HIS 101 A PHE 102 n 102 PHE 102 A ALA 103 n 103 ALA 103 A LYS 104 n 104 LYS 104 A PRO 105 n 105 PRO 105 A PHE 106 n 106 PHE 106 A ASP 107 n 107 ASP 107 A ILE 108 n 108 ILE 108 A ASP 109 n 109 ASP 109 A GLU 110 n 110 GLU 110 A ILE 111 n 111 ILE 111 A ARG 112 n 112 ARG 112 A ASP 113 n 113 ASP 113 A ALA 114 n 114 ALA 114 A VAL 115 n 115 VAL 115 A LYS 116 n 116 LYS 116 A LYS 117 n 117 LYS 117 A TYR 118 n 118 TYR 118 A LEU 119 n 119 LEU 119 A PRO 120 n 120 PRO 120 A LEU 121 n 121 LEU 121 A n 122 122 A n 123 123 A n 124 124 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O GLN 29 A O GLN 29 A N ILE 6 A N ILE 6 A O LEU 7 A O LEU 7 A N LEU 50 A N LEU 50 A O VAL 51 A O VAL 51 A N ARG 77 A N ARG 77 A O VAL 78 A O VAL 78 A N LEU 99 A N LEU 99 1 A CG ASN 3 A CG ASN 3 1 Y 1 A OD1 ASN 3 A OD1 ASN 3 1 Y 1 A ND2 ASN 3 A ND2 ASN 3 1 Y 1 A CD GLU 21 A CD GLU 21 1 Y 1 A OE1 GLU 21 A OE1 GLU 21 1 Y 1 A OE2 GLU 21 A OE2 GLU 21 1 Y 1 A CD1 LEU 37 A CD1 LEU 37 1 Y 1 A CD2 LEU 37 A CD2 LEU 37 1 Y 1 A CG LYS 45 A CG LYS 45 1 Y 1 A CD LYS 45 A CD LYS 45 1 Y 1 A CE LYS 45 A CE LYS 45 1 Y 1 A NZ LYS 45 A NZ LYS 45 1 Y 1 A MET 1 A MET 1 1 Y 1 A MET 2 A MET 2 1 Y 1 A LYS 122 A LYS 122 1 Y 1 A SER 123 A SER 123 1 Y 1 A ASN 124 A ASN 124 1 Y 1 A GLU 86 -101.24 57.46 1 A LEU 119 -119.85 68.57 38. 2.14 0.0 0.0 2.14 0.0 -4.28 0.1810000 0.1810000 2.45 8. 5449 92.7 1 2. MOLECULAR REPLACEMENT 13 2.45 8. 20 966 2 0 944 0.017 1.8 2.45 50.0 1NAT 24763 0.0 0.0570000 1 19.8 4.5 92.7 0.1530000 2.45 2.64 4.2 2.4 79.8 model building X-PLOR refinement X-PLOR data reduction UCSD data scaling SCAL1 (UCSD) phasing X-PLOR CRYSTAL STRUCTURE OF SPOOF FROM BACILLUS SUBTILIS 1 N N 2 N N A TYR 13 A TYR 13 HELX_P A GLU 26 A GLU 26 1 1 14 A GLY 36 A GLY 36 HELX_P A GLU 46 A GLU 46 5 2 11 A GLY 62 A GLY 62 HELX_P A ILE 72 A ILE 72 1 3 11 A LEU 87 A LEU 87 HELX_P A LEU 96 A LEU 96 1 4 10 A ILE 108 A ILE 108 HELX_P A TYR 118 A TYR 118 1 5 11 REGULATORY PROTEIN ASPARTATE POCKET, SPORULATION RESPONSE REGULATOR, TWO COMPONENT SYSTEM, REGULATORY PROTEIN A LYS 104 A LYS 104 1 A PRO 105 A PRO 105 -0.58 SP0F_BACSU UNP 1 1 P06628 MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN 1 124 1NAT 1 124 P06628 A 1 1 124 5 parallel parallel parallel parallel A GLN 29 A GLN 29 A ALA 33 A ALA 33 A LYS 5 A LYS 5 A VAL 9 A VAL 9 A LEU 50 A LEU 50 A ASP 54 A ASP 54 A ARG 77 A ARG 77 A THR 82 A THR 82 A ALA 98 A ALA 98 A ALA 103 A ALA 103 94 P 42 21 2