0.017557 0.010137 0.000000 0.000000 0.020273 0.000000 0.000000 0.000000 0.012121 0.00000 0.00000 0.00000 Karthikeyan, S. Zhou, Q. Mseeh, F. Grishin, N.V. Osterman, A.L. Zhang, H. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 56.957 56.957 82.501 C10 H15 N5 O10 P2 427.201 n ADENOSINE-5'-DIPHOSPHATE non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C17 H20 N4 O6 376.364 RIBOFLAVIN RIBOFLAVINE; VITAMIN B2 non-polymer C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N P N 2 N O N 3 N O N 4 N O N 5 S P N 6 N O N 7 N O N 8 N O N 9 N O N 10 N C N 11 R C N 12 N O N 13 S C N 14 N O N 15 R C N 16 N O N 17 R C Y 18 N N Y 19 N C Y 20 N N Y 21 N C Y 22 N C N 23 N N Y 24 N N Y 25 N C Y 26 N N Y 27 N C N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N N N 44 S C N 45 N C N 46 N O N 47 N C N 48 N O N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N N N 57 S C N 58 N C N 59 N O N 60 N C N 61 N C N 62 N C N 63 N N N 64 N C N 65 N N N 66 N N N 67 N O N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N N N 84 S C N 85 N C N 86 N O N 87 N C N 88 N C N 89 N O N 90 N N N 91 N O N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N N N 101 S C N 102 N C N 103 N O N 104 N C N 105 N C N 106 N O N 107 N O N 108 N O N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N N N 117 R C N 118 N C N 119 N O N 120 N C N 121 N S N 122 N O N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N N N 131 S C N 132 N C N 133 N O N 134 N C N 135 N C N 136 N C N 137 N O N 138 N N N 139 N O N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N N N 151 S C N 152 N C N 153 N O N 154 N C N 155 N C N 156 N C N 157 N O N 158 N O N 159 N O N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N N N 170 N C N 171 N C N 172 N O N 173 N O N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N N N 180 S C N 181 N C N 182 N O N 183 N C Y 184 N C Y 185 N N Y 186 N C Y 187 N C Y 188 N N N 189 N O N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N O N 201 N H N 202 N H N 203 N N N 204 S C N 205 N C N 206 N O N 207 S C N 208 N C N 209 N C N 210 N C N 211 N O N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N N N 226 S C N 227 N C N 228 N O N 229 N C N 230 N C N 231 N C N 232 N C N 233 N O N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N N N 248 S C N 249 N C N 250 N O N 251 N C N 252 N C N 253 N C N 254 N C N 255 N N N 256 N O N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N N N 273 S C N 274 N C N 275 N O N 276 N C N 277 N C N 278 N S N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N MG N 293 N N N 294 S C N 295 N C N 296 N O N 297 N C Y 298 N C Y 299 N C Y 300 N C Y 301 N C Y 302 N C Y 303 N C N 304 N O N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N N N 317 S C N 318 N C N 319 N O N 320 N C N 321 N C N 322 N C N 323 N O N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N N N 334 N C N 335 N O N 336 N N N 337 N C N 338 N O N 339 N C N 340 N N Y 341 N C Y 342 N C Y 343 N C N 344 N C Y 345 N C N 346 N C Y 347 N C Y 348 N C N 349 N N N 350 N C N 351 N C N 352 S C N 353 N O N 354 S C N 355 N O N 356 R C N 357 N O N 358 N C N 359 N O N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N N N 381 S C N 382 N C N 383 N O N 384 N C N 385 N O N 386 N O N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N N N 395 S C N 396 N C N 397 N O N 398 R C N 399 N O N 400 N C N 401 N O N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N N N 412 S C N 413 N C N 414 N O N 415 N C Y 416 N C Y 417 N C Y 418 N C Y 419 N N Y 420 N C Y 421 N C Y 422 N C Y 423 N C Y 424 N C N 425 N O N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N N N 439 S C N 440 N C N 441 N O N 442 N C Y 443 N C Y 444 N C Y 445 N C Y 446 N C Y 447 N C Y 448 N C N 449 N O N 450 N O N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N N N 463 S C N 464 N C N 465 N O N 466 N C N 467 N C N 468 N C N 469 N O N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 479 N H N 480 N H N 1 N doub N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing Y 30 N sing Y 31 N sing Y 32 N doub N 33 N sing Y 34 N sing Y 35 N sing Y 36 N doub N 37 N sing Y 38 N doub N 39 N sing N 40 N sing Y 41 N sing Y 42 N doub N 43 N sing Y 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N doub N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N doub N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N doub N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N doub N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N doub N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N doub N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N doub N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N doub N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N doub N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N doub N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N doub N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N doub N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing Y 184 N sing Y 185 N doub Y 186 N doub N 187 N sing Y 188 N sing N 189 N sing Y 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N doub N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N doub N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N doub N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N doub N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N doub N 288 N sing N 289 N sing N 290 N sing N 291 N sing Y 292 N doub Y 293 N sing Y 294 N sing N 295 N sing Y 296 N doub N 297 N sing Y 298 N doub N 299 N sing Y 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N doub N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N doub N 323 N doub N 324 N sing N 325 N sing N 326 N sing N 327 N doub N 328 N sing N 329 N doub N 330 N sing N 331 N sing Y 332 N doub Y 333 N sing Y 334 N sing N 335 N sing N 336 N sing Y 337 N doub N 338 N sing N 339 N sing N 340 N sing N 341 N sing Y 342 N sing N 343 N sing N 344 N sing N 345 N sing Y 346 N doub N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N doub N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N doub N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N doub N 406 N sing N 407 N sing N 408 N sing N 409 N sing Y 410 N doub Y 411 N sing Y 412 N sing N 413 N sing Y 414 N doub Y 415 N sing Y 416 N sing N 417 N sing Y 418 N sing Y 419 N doub N 420 N sing Y 421 N doub N 422 N sing Y 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N doub N 434 N sing N 435 N sing N 436 N sing N 437 N sing Y 438 N doub Y 439 N sing Y 440 N sing N 441 N sing Y 442 N doub N 443 N sing Y 444 N doub N 445 N sing Y 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N doub N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing UK Structure STRUE6 2005 0969-2126 11 265 273 10.1016/S0969-2126(03)00024-8 12623014 Crystal Structure of Human Riboflavin Kinase Reveals a Beta Barrel Fold and a Novel Active Site Arch 2003 10.2210/pdb1nb9/pdb pdb_00001nb9 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 OSMIC MIRROR IMAGE PLATE 2002-09-05 RIGAKU RAXIS IV MIRRORS SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RUH3R 16772.084 hypothetical protein FLJ11149 2.7.1.26 1 man polymer 24.305 MAGNESIUM ION 1 syn non-polymer 427.201 ADENOSINE-5'-DIPHOSPHATE 1 syn non-polymer 376.364 RIBOFLAVIN 1 syn non-polymer 18.015 water 118 nat water Riboflavin kinase no no RHLPYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVSIGWNPYYKNTKKSMETH IMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKRLELPEYLKIKEDNFFQVSK RHLPYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVSIGWNPYYKNTKKSMETH IMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKRLELPEYLKIKEDNFFQVSK A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia Escherichia coli sample FLJ11149 9606 Homo sapiens 511693 Escherichia coli BL21 BL21 PLASMID pPROEX-Hta 1 2.01 38.18 VAPOR DIFFUSION, HANGING DROP 6.5 Na cadodalyte, Mg acetate, PEG 8000, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K 293 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn struct_ref_seq_dif struct_site repository Initial release Version format compliance Advisory Version format compliance Data collection Database references Derived calculations Refinement description 1 0 2003-03-11 1 1 2008-04-28 1 2 2011-07-13 1 3 2023-08-16 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2002-12-02 REL REL MG MAGNESIUM ION ADP ADENOSINE-5'-DIPHOSPHATE RBF RIBOFLAVIN HOH water 1NB0 PDB ENTRY 1NB0 PDB experimental model MG 301 2 MG MG 201 A ADP 201 3 ADP ADP 301 A RBF 401 4 RBF RBF 401 A HOH 501 5 HOH HOH 501 A HOH 502 5 HOH HOH 502 A HOH 503 5 HOH HOH 503 A HOH 504 5 HOH HOH 504 A HOH 505 5 HOH HOH 505 A HOH 506 5 HOH HOH 506 A HOH 507 5 HOH HOH 507 A HOH 508 5 HOH HOH 508 A HOH 509 5 HOH HOH 509 A HOH 510 5 HOH HOH 510 A HOH 511 5 HOH HOH 511 A HOH 512 5 HOH HOH 512 A HOH 513 5 HOH HOH 513 A HOH 514 5 HOH HOH 514 A HOH 515 5 HOH HOH 515 A HOH 516 5 HOH HOH 516 A HOH 517 5 HOH HOH 517 A HOH 518 5 HOH HOH 518 A HOH 519 5 HOH HOH 519 A HOH 520 5 HOH HOH 520 A HOH 521 5 HOH HOH 521 A HOH 522 5 HOH HOH 522 A HOH 523 5 HOH HOH 523 A HOH 524 5 HOH HOH 524 A HOH 525 5 HOH HOH 525 A HOH 526 5 HOH HOH 526 A HOH 527 5 HOH HOH 527 A HOH 528 5 HOH HOH 528 A HOH 529 5 HOH HOH 529 A HOH 530 5 HOH HOH 530 A HOH 531 5 HOH HOH 531 A HOH 532 5 HOH HOH 532 A HOH 533 5 HOH HOH 533 A HOH 534 5 HOH HOH 534 A HOH 535 5 HOH HOH 535 A HOH 536 5 HOH HOH 536 A HOH 537 5 HOH HOH 537 A HOH 538 5 HOH HOH 538 A HOH 539 5 HOH HOH 539 A HOH 540 5 HOH HOH 540 A HOH 541 5 HOH HOH 541 A HOH 542 5 HOH HOH 542 A HOH 543 5 HOH HOH 543 A HOH 544 5 HOH HOH 544 A HOH 545 5 HOH HOH 545 A HOH 546 5 HOH HOH 546 A HOH 547 5 HOH HOH 547 A HOH 548 5 HOH HOH 548 A HOH 549 5 HOH HOH 549 A HOH 550 5 HOH HOH 550 A HOH 551 5 HOH HOH 551 A HOH 552 5 HOH HOH 552 A HOH 553 5 HOH HOH 553 A HOH 554 5 HOH HOH 554 A HOH 555 5 HOH HOH 555 A HOH 556 5 HOH HOH 556 A HOH 557 5 HOH HOH 557 A HOH 558 5 HOH HOH 558 A HOH 559 5 HOH HOH 559 A HOH 560 5 HOH HOH 560 A HOH 561 5 HOH HOH 561 A HOH 562 5 HOH HOH 562 A HOH 563 5 HOH HOH 563 A HOH 564 5 HOH HOH 564 A HOH 565 5 HOH HOH 565 A HOH 566 5 HOH HOH 566 A HOH 567 5 HOH HOH 567 A HOH 568 5 HOH HOH 568 A HOH 569 5 HOH HOH 569 A HOH 570 5 HOH HOH 570 A HOH 571 5 HOH HOH 571 A HOH 572 5 HOH HOH 572 A HOH 573 5 HOH HOH 573 A HOH 574 5 HOH HOH 574 A HOH 575 5 HOH HOH 575 A HOH 576 5 HOH HOH 576 A HOH 577 5 HOH HOH 577 A HOH 578 5 HOH HOH 578 A HOH 579 5 HOH HOH 579 A HOH 580 5 HOH HOH 580 A HOH 581 5 HOH HOH 581 A HOH 582 5 HOH HOH 582 A HOH 583 5 HOH HOH 583 A HOH 584 5 HOH HOH 584 A HOH 585 5 HOH HOH 585 A HOH 586 5 HOH HOH 586 A HOH 587 5 HOH HOH 587 A HOH 588 5 HOH HOH 588 A HOH 589 5 HOH HOH 589 A HOH 590 5 HOH HOH 590 A HOH 591 5 HOH HOH 591 A HOH 592 5 HOH HOH 592 A HOH 593 5 HOH HOH 593 A HOH 594 5 HOH HOH 594 A HOH 595 5 HOH HOH 595 A HOH 596 5 HOH HOH 596 A HOH 597 5 HOH HOH 597 A HOH 598 5 HOH HOH 598 A HOH 599 5 HOH HOH 599 A HOH 600 5 HOH HOH 600 A HOH 601 5 HOH HOH 601 A HOH 602 5 HOH HOH 602 A HOH 603 5 HOH HOH 603 A HOH 604 5 HOH HOH 604 A HOH 605 5 HOH HOH 605 A HOH 606 5 HOH HOH 606 A HOH 607 5 HOH HOH 607 A HOH 608 5 HOH HOH 608 A HOH 609 5 HOH HOH 609 A HOH 610 5 HOH HOH 610 A HOH 611 5 HOH HOH 611 A HOH 612 5 HOH HOH 612 A HOH 613 5 HOH HOH 613 A HOH 614 5 HOH HOH 614 A HOH 615 5 HOH HOH 615 A HOH 616 5 HOH HOH 616 A HOH 617 5 HOH HOH 617 A HOH 618 5 HOH HOH 618 A ARG 9 n 1 ARG 9 A HIS 10 n 2 HIS 10 A LEU 11 n 3 LEU 11 A PRO 12 n 4 PRO 12 A TYR 13 n 5 TYR 13 A PHE 14 n 6 PHE 14 A CYS 15 n 7 CYS 15 A ARG 16 n 8 ARG 16 A GLY 17 n 9 GLY 17 A GLN 18 n 10 GLN 18 A VAL 19 n 11 VAL 19 A VAL 20 n 12 VAL 20 A ARG 21 n 13 ARG 21 A GLY 22 n 14 GLY 22 A PHE 23 n 15 PHE 23 A GLY 24 n 16 GLY 24 A ARG 25 n 17 ARG 25 A GLY 26 n 18 GLY 26 A SER 27 n 19 SER 27 A LYS 28 n 20 LYS 28 A GLN 29 n 21 GLN 29 A LEU 30 n 22 LEU 30 A GLY 31 n 23 GLY 31 A ILE 32 n 24 ILE 32 A PRO 33 n 25 PRO 33 A THR 34 n 26 THR 34 A ALA 35 n 27 ALA 35 A ASN 36 n 28 ASN 36 A PHE 37 n 29 PHE 37 A PRO 38 n 30 PRO 38 A GLU 39 n 31 GLU 39 A GLN 40 n 32 GLN 40 A VAL 41 n 33 VAL 41 A VAL 42 n 34 VAL 42 A ASP 43 n 35 ASP 43 A ASN 44 n 36 ASN 44 A LEU 45 n 37 LEU 45 A PRO 46 n 38 PRO 46 A ALA 47 n 39 ALA 47 A ASP 48 n 40 ASP 48 A ILE 49 n 41 ILE 49 A SER 50 n 42 SER 50 A THR 51 n 43 THR 51 A GLY 52 n 44 GLY 52 A ILE 53 n 45 ILE 53 A TYR 54 n 46 TYR 54 A TYR 55 n 47 TYR 55 A GLY 56 n 48 GLY 56 A TRP 57 n 49 TRP 57 A ALA 58 n 50 ALA 58 A SER 59 n 51 SER 59 A VAL 60 n 52 VAL 60 A GLY 61 n 53 GLY 61 A SER 62 n 54 SER 62 A GLY 63 n 55 GLY 63 A ASP 64 n 56 ASP 64 A VAL 65 n 57 VAL 65 A HIS 66 n 58 HIS 66 A LYS 67 n 59 LYS 67 A MET 68 n 60 MET 68 A VAL 69 n 61 VAL 69 A VAL 70 n 62 VAL 70 A SER 71 n 63 SER 71 A ILE 72 n 64 ILE 72 A GLY 73 n 65 GLY 73 A TRP 74 n 66 TRP 74 A ASN 75 n 67 ASN 75 A PRO 76 n 68 PRO 76 A TYR 77 n 69 TYR 77 A TYR 78 n 70 TYR 78 A LYS 79 n 71 LYS 79 A ASN 80 n 72 ASN 80 A THR 81 n 73 THR 81 A LYS 82 n 74 LYS 82 A LYS 83 n 75 LYS 83 A SER 84 n 76 SER 84 A MET 85 n 77 MET 85 A GLU 86 n 78 GLU 86 A THR 87 n 79 THR 87 A HIS 88 n 80 HIS 88 A ILE 89 n 81 ILE 89 A MET 90 n 82 MET 90 A HIS 91 n 83 HIS 91 A THR 92 n 84 THR 92 A PHE 93 n 85 PHE 93 A LYS 94 n 86 LYS 94 A GLU 95 n 87 GLU 95 A ASP 96 n 88 ASP 96 A PHE 97 n 89 PHE 97 A TYR 98 n 90 TYR 98 A GLY 99 n 91 GLY 99 A GLU 100 n 92 GLU 100 A ILE 101 n 93 ILE 101 A LEU 102 n 94 LEU 102 A ASN 103 n 95 ASN 103 A VAL 104 n 96 VAL 104 A ALA 105 n 97 ALA 105 A ILE 106 n 98 ILE 106 A VAL 107 n 99 VAL 107 A GLY 108 n 100 GLY 108 A TYR 109 n 101 TYR 109 A LEU 110 n 102 LEU 110 A ARG 111 n 103 ARG 111 A PRO 112 n 104 PRO 112 A GLU 113 n 105 GLU 113 A LYS 114 n 106 LYS 114 A ASN 115 n 107 ASN 115 A PHE 116 n 108 PHE 116 A ASP 117 n 109 ASP 117 A SER 118 n 110 SER 118 A LEU 119 n 111 LEU 119 A GLU 120 n 112 GLU 120 A SER 121 n 113 SER 121 A LEU 122 n 114 LEU 122 A ILE 123 n 115 ILE 123 A SER 124 n 116 SER 124 A ALA 125 n 117 ALA 125 A ILE 126 n 118 ILE 126 A GLN 127 n 119 GLN 127 A GLY 128 n 120 GLY 128 A ASP 129 n 121 ASP 129 A ILE 130 n 122 ILE 130 A GLU 131 n 123 GLU 131 A GLU 132 n 124 GLU 132 A ALA 133 n 125 ALA 133 A LYS 134 n 126 LYS 134 A LYS 135 n 127 LYS 135 A ARG 136 n 128 ARG 136 A LEU 137 n 129 LEU 137 A GLU 138 n 130 GLU 138 A LEU 139 n 131 LEU 139 A PRO 140 n 132 PRO 140 A GLU 141 n 133 GLU 141 A TYR 142 n 134 TYR 142 A LEU 143 n 135 LEU 143 A LYS 144 n 136 LYS 144 A ILE 145 n 137 ILE 145 A LYS 146 n 138 LYS 146 A GLU 147 n 139 GLU 147 A ASP 148 n 140 ASP 148 A ASN 149 n 141 ASN 149 A PHE 150 n 142 PHE 150 A PHE 151 n 143 PHE 151 A GLN 152 n 144 GLN 152 A VAL 153 n 145 VAL 153 A SER 154 n 146 SER 154 A LYS 155 n 147 LYS 155 A 1.9446 0.5016 0.6070 0.7347 0.1609 1.5882 0.0070 0.0133 -0.0097 0.0281 0.0289 0.0125 -0.0074 -0.0652 -0.0359 0.0129 0.0165 0.0002 0.0680 0.0088 0.0408 refined -6.3140 23.8390 33.4110 X-RAY DIFFRACTION A 9 A 1 A 155 A 147 X-RAY DIFFRACTION 1 author_defined_assembly 1 monomeric A THR 34 A O THR 26 1_555 A MG 201 B MG MG 1_555 A THR 34 A OG1 THR 26 1_555 85.0 A THR 34 A O THR 26 1_555 A MG 201 B MG MG 1_555 A ADP 301 C O1B ADP 1_555 96.1 A THR 34 A OG1 THR 26 1_555 A MG 201 B MG MG 1_555 A ADP 301 C O1B ADP 1_555 178.0 A THR 34 A O THR 26 1_555 A MG 201 B MG MG 1_555 A ADP 301 C O2A ADP 1_555 89.6 A THR 34 A OG1 THR 26 1_555 A MG 201 B MG MG 1_555 A ADP 301 C O2A ADP 1_555 87.9 A ADP 301 C O1B ADP 1_555 A MG 201 B MG MG 1_555 A ADP 301 C O2A ADP 1_555 93.8 A THR 34 A O THR 26 1_555 A MG 201 B MG MG 1_555 A HOH 502 E O HOH 1_555 91.1 A THR 34 A OG1 THR 26 1_555 A MG 201 B MG MG 1_555 A HOH 502 E O HOH 1_555 87.8 A ADP 301 C O1B ADP 1_555 A MG 201 B MG MG 1_555 A HOH 502 E O HOH 1_555 90.5 A ADP 301 C O2A ADP 1_555 A MG 201 B MG MG 1_555 A HOH 502 E O HOH 1_555 175.6 A THR 34 A O THR 26 1_555 A MG 201 B MG MG 1_555 A HOH 568 E O HOH 1_555 171.3 A THR 34 A OG1 THR 26 1_555 A MG 201 B MG MG 1_555 A HOH 568 E O HOH 1_555 87.0 A ADP 301 C O1B ADP 1_555 A MG 201 B MG MG 1_555 A HOH 568 E O HOH 1_555 92.1 A ADP 301 C O2A ADP 1_555 A MG 201 B MG MG 1_555 A HOH 568 E O HOH 1_555 87.0 A HOH 502 E O HOH 1_555 A MG 201 B MG MG 1_555 A HOH 568 E O HOH 1_555 91.7 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N CYS 15 A N CYS 7 A O VAL 104 A O VAL 96 A O LEU 110 A O LEU 102 A N ILE 53 A N ILE 45 A N GLY 52 A N GLY 44 A O ILE 72 A O ILE 64 A N SER 71 A N SER 63 A O GLU 86 A O GLU 78 A O THR 87 A O THR 79 A N ALA 35 A N ALA 27 1 A CB ARG 9 A CB ARG 1 1 Y 1 A CG ARG 9 A CG ARG 1 1 Y 1 A CD ARG 9 A CD ARG 1 1 Y 1 A NE ARG 9 A NE ARG 1 1 Y 1 A CZ ARG 9 A CZ ARG 1 1 Y 1 A NH1 ARG 9 A NH1 ARG 1 1 Y 1 A NH2 ARG 9 A NH2 ARG 1 1 Y 1 A ASN 80 62.01 -137.35 20.827 0.29 0.15 0.00 0.29 0.00 -0.44 0.961 0.959 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.20573 0.18362 0.18476 1.70 49.39 866 17150 16284 5.0 97.64 2.024 0.068 RANDOM LIKELY RESIDUAL 1 ISOTROPIC THROUGHOUT 0.0 MOLECULAR REPLACEMENT 0.114 0.104 0.80 0.80 1.40 PDB ENTRY 1NB0 MAXIMUM LIKELIHOOD BABINET MODEL WITH MASK 1.70 49.39 118 1350 55 0 1177 0.016 0.022 1291 1.725 2.003 1751 6.097 5.000 146 0.117 0.200 183 0.009 0.020 964 0.214 0.200 544 0.153 0.200 113 0.195 0.200 47 0.168 0.200 12 1.002 1.500 732 1.799 2.000 1188 2.536 3.000 559 4.104 4.500 563 0.319 0.301 1.744 59 1067 1067 20 26.838 1.7 50.0 1NB9 17163 1.0 -3.0 0.03 1 42.2 7.2 97.5 1.70 1.76 5.1 1557 0.263 1 3.4 90.3 data collection HKL-2000 data scaling SCALEPACK phasing SOLVE refinement REFMAC 5.1.27 data reduction HKL-2000 phasing MOLREP Crystal Structure of Riboflavin Kinase 1 N N 2 N N 3 N N 4 N N 5 N N A GLY 26 A GLY 18 HELX_P A GLY 31 A GLY 23 5 1 6 A PRO 38 A PRO 30 HELX_P A ASN 44 A ASN 36 1 2 7 A SER 118 A SER 110 HELX_P A LEU 137 A LEU 129 1 3 20 A LEU 139 A LEU 131 HELX_P A LYS 144 A LYS 136 1 4 6 A ILE 145 A ILE 137 HELX_P A GLU 147 A GLU 139 5 5 3 A ASP 148 A ASP 140 HELX_P A VAL 153 A VAL 145 1 6 6 metalc 2.160 A THR 34 A O THR 26 1_555 A MG 201 B MG MG 1_555 metalc 2.155 A THR 34 A OG1 THR 26 1_555 A MG 201 B MG MG 1_555 metalc 2.055 A MG 201 B MG MG 1_555 A ADP 301 C O1B ADP 1_555 metalc 2.003 A MG 201 B MG MG 1_555 A ADP 301 C O2A ADP 1_555 metalc 2.111 A MG 201 B MG MG 1_555 A HOH 502 E O HOH 1_555 metalc 2.079 A MG 201 B MG MG 1_555 A HOH 568 E O HOH 1_555 TRANSFERASE TRANSFERASE, BETA BARREL, RIBOFLAVIN, RIBOFLAVIN KINASE A LEU 11 A LEU 3 1 A PRO 12 A PRO 4 -0.38 RIFK_HUMAN UNP 1 9 Q969G6 RHLPYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVSIGWNPYYKNTKKSMETH IMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKRLELPEHLKIKEDNFFQVSK 9 155 1NB9 9 155 Q969G6 A 1 1 147 1 HIS conflict TYR 142 1NB9 A Q969G6 UNP 142 134 6 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A TYR 13 A TYR 5 A GLN 18 A GLN 10 A ILE 101 A ILE 93 A ARG 111 A ARG 103 A GLY 52 A GLY 44 A VAL 60 A VAL 52 A HIS 66 A HIS 58 A TRP 74 A TRP 66 A LYS 83 A LYS 75 A ILE 89 A ILE 81 A ALA 35 A ALA 27 A ASN 36 A ASN 28 BINDING SITE FOR RESIDUE MG A 201 A MG 201 Software 4 BINDING SITE FOR RESIDUE ADP A 301 A ADP 301 Software 24 BINDING SITE FOR RESIDUE RBF A 401 A RBF 401 Software 11 A THR 34 A THR 26 4 1_555 A ADP 301 C ADP 4 1_555 A HOH 502 E HOH 4 1_555 A HOH 568 E HOH 4 1_555 A VAL 19 A VAL 11 24 1_555 A ARG 21 A ARG 13 24 1_555 A GLY 22 A GLY 14 24 1_555 A GLY 26 A GLY 18 24 1_555 A SER 27 A SER 19 24 1_555 A LYS 28 A LYS 20 24 1_555 A PRO 33 A PRO 25 24 1_555 A THR 34 A THR 26 24 1_555 A ASN 36 A ASN 28 24 1_555 A THR 87 A THR 79 24 1_555 A ILE 89 A ILE 81 24 1_555 A HIS 91 A HIS 83 24 1_555 A PHE 93 A PHE 85 24 1_555 A ASP 96 A ASP 88 24 1_555 A PHE 97 A PHE 89 24 1_555 A TYR 98 A TYR 90 24 1_555 A MG 201 B MG 24 1_555 A HOH 501 E HOH 24 1_555 A HOH 502 E HOH 24 1_555 A HOH 508 E HOH 24 1_555 A HOH 509 E HOH 24 1_555 A HOH 518 E HOH 24 1_555 A HOH 523 E HOH 24 3_564 A HOH 568 E HOH 24 1_555 A THR 34 A THR 26 11 1_555 A ILE 53 A ILE 45 11 1_555 A VAL 69 A VAL 61 11 1_555 A GLU 86 A GLU 78 11 1_555 A ARG 111 A ARG 103 11 1_555 A LYS 114 A LYS 106 11 1_555 A PHE 116 A PHE 108 11 1_555 A LEU 122 A LEU 114 11 1_555 A ASP 129 A ASP 121 11 1_555 A HOH 548 E HOH 11 1_555 A HOH 568 E HOH 11 1_555 152 P 31 2 1