0.008562 0.000000 0.004945 0.000000 0.016181 0.000000 0.000000 0.000000 0.013930 0.00000 0.00000 0.00000 Prota, A.E. Campbell, J.A. Schelling, P. Forrest, J.C. Watson, M.J. Peters, T.R. Aurrand-Lions, M. Imhof, B.A. Dermody, T.S. Stehle, T. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.0 120.01 90.0 116.8 61.8 82.9 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 100 5366 5371 10.1073/pnas.0937718100 12697893 Crystal structure of human junctional adhesion molecule 1: Implications for reovirus binding 2003 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 100 1 CCD 2001-10-02 CUSTOM-MADE monochromator at X25 SINGLE WAVELENGTH M x-ray 1 monochromator at X25 SINGLE WAVELENGTH M x-ray 1 1.1 1.0 X25 NSLS 1.1 SYNCHROTRON NSLS BEAMLINE X25 X25 NSLS 1.1 SYNCHROTRON NSLS BEAMLINE X25 22703.221 Junctional adhesion molecule 1 2 man polymer 18.015 water 124 nat water JAM; Platelet adhesion molecule 1; PAM-1; Platelet F11 receptor no no AMGSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDT GTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFS NSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEAVE AMGSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDT GTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFS NSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEAVE A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia sample JAM1 9606 Homo sapiens 562 Escherichia coli plasmid 2 2.85 56.86 VAPOR DIFFUSION, HANGING DROP 6.0 PEG 6000, isopropanol, sodium citrate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K 293 repository Initial release Version format compliance Version format compliance 1 0 2003-04-01 1 1 2008-04-28 1 2 2011-07-13 RCSB Y RCSB 2002-12-03 REL HOH water HOH 1 2 HOH HOH 234 A HOH 3 2 HOH HOH 235 A HOH 5 2 HOH HOH 236 A HOH 6 2 HOH HOH 237 A HOH 8 2 HOH HOH 238 A HOH 9 2 HOH HOH 239 A HOH 10 2 HOH HOH 240 A HOH 12 2 HOH HOH 241 A HOH 15 2 HOH HOH 242 A HOH 17 2 HOH HOH 243 A HOH 19 2 HOH HOH 244 A HOH 20 2 HOH HOH 245 A HOH 22 2 HOH HOH 246 A HOH 23 2 HOH HOH 247 A HOH 25 2 HOH HOH 248 A HOH 27 2 HOH HOH 249 A HOH 28 2 HOH HOH 250 A HOH 30 2 HOH HOH 251 A HOH 31 2 HOH HOH 252 A HOH 32 2 HOH HOH 253 A HOH 34 2 HOH HOH 254 A HOH 35 2 HOH HOH 255 A HOH 39 2 HOH HOH 256 A HOH 40 2 HOH HOH 257 A HOH 41 2 HOH HOH 258 A HOH 42 2 HOH HOH 259 A HOH 43 2 HOH HOH 260 A HOH 44 2 HOH HOH 261 A HOH 45 2 HOH HOH 262 A HOH 46 2 HOH HOH 263 A HOH 47 2 HOH HOH 264 A HOH 48 2 HOH HOH 265 A HOH 49 2 HOH HOH 266 A HOH 52 2 HOH HOH 267 A HOH 60 2 HOH HOH 268 A HOH 68 2 HOH HOH 269 A HOH 72 2 HOH HOH 270 A HOH 73 2 HOH HOH 271 A HOH 74 2 HOH HOH 272 A HOH 75 2 HOH HOH 273 A HOH 76 2 HOH HOH 274 A HOH 77 2 HOH HOH 275 A HOH 78 2 HOH HOH 276 A HOH 81 2 HOH HOH 277 A HOH 88 2 HOH HOH 278 A HOH 94 2 HOH HOH 279 A HOH 104 2 HOH HOH 280 A HOH 105 2 HOH HOH 281 A HOH 106 2 HOH HOH 282 A HOH 107 2 HOH HOH 283 A HOH 108 2 HOH HOH 284 A HOH 109 2 HOH HOH 285 A HOH 110 2 HOH HOH 286 A HOH 111 2 HOH HOH 287 A HOH 112 2 HOH HOH 288 A HOH 113 2 HOH HOH 289 A HOH 114 2 HOH HOH 290 A HOH 115 2 HOH HOH 291 A HOH 116 2 HOH HOH 292 A HOH 117 2 HOH HOH 293 A HOH 123 2 HOH HOH 294 A HOH 2 2 HOH HOH 234 B HOH 4 2 HOH HOH 235 B HOH 7 2 HOH HOH 236 B HOH 11 2 HOH HOH 237 B HOH 13 2 HOH HOH 238 B HOH 14 2 HOH HOH 239 B HOH 16 2 HOH HOH 240 B HOH 18 2 HOH HOH 241 B HOH 21 2 HOH HOH 242 B HOH 24 2 HOH HOH 243 B HOH 26 2 HOH HOH 244 B HOH 29 2 HOH HOH 245 B HOH 33 2 HOH HOH 246 B HOH 36 2 HOH HOH 247 B HOH 37 2 HOH HOH 248 B HOH 38 2 HOH HOH 249 B HOH 50 2 HOH HOH 250 B HOH 51 2 HOH HOH 251 B HOH 53 2 HOH HOH 252 B HOH 54 2 HOH HOH 253 B HOH 55 2 HOH HOH 254 B HOH 56 2 HOH HOH 255 B HOH 57 2 HOH HOH 256 B HOH 58 2 HOH HOH 257 B HOH 59 2 HOH HOH 258 B HOH 61 2 HOH HOH 259 B HOH 62 2 HOH HOH 260 B HOH 63 2 HOH HOH 261 B HOH 64 2 HOH HOH 262 B HOH 65 2 HOH HOH 263 B HOH 66 2 HOH HOH 264 B HOH 67 2 HOH HOH 265 B HOH 69 2 HOH HOH 266 B HOH 70 2 HOH HOH 267 B HOH 71 2 HOH HOH 268 B HOH 79 2 HOH HOH 269 B HOH 80 2 HOH HOH 270 B HOH 82 2 HOH HOH 271 B HOH 83 2 HOH HOH 272 B HOH 84 2 HOH HOH 273 B HOH 85 2 HOH HOH 274 B HOH 86 2 HOH HOH 275 B HOH 87 2 HOH HOH 276 B HOH 89 2 HOH HOH 277 B HOH 90 2 HOH HOH 278 B HOH 91 2 HOH HOH 279 B HOH 92 2 HOH HOH 280 B HOH 93 2 HOH HOH 281 B HOH 95 2 HOH HOH 282 B HOH 96 2 HOH HOH 283 B HOH 97 2 HOH HOH 284 B HOH 98 2 HOH HOH 285 B HOH 99 2 HOH HOH 286 B HOH 100 2 HOH HOH 287 B HOH 101 2 HOH HOH 288 B HOH 102 2 HOH HOH 289 B HOH 103 2 HOH HOH 290 B HOH 118 2 HOH HOH 291 B HOH 119 2 HOH HOH 292 B HOH 120 2 HOH HOH 293 B HOH 121 2 HOH HOH 294 B HOH 122 2 HOH HOH 295 B HOH 124 2 HOH HOH 296 B ALA 25 n 1 ALA 25 A MET 26 n 2 MET 26 A GLY 27 n 3 GLY 27 A SER 28 n 4 SER 28 A VAL 29 n 5 VAL 29 A THR 30 n 6 THR 30 A VAL 31 n 7 VAL 31 A HIS 32 n 8 HIS 32 A SER 33 n 9 SER 33 A SER 34 n 10 SER 34 A GLU 35 n 11 GLU 35 A PRO 36 n 12 PRO 36 A GLU 37 n 13 GLU 37 A VAL 38 n 14 VAL 38 A ARG 39 n 15 ARG 39 A ILE 40 n 16 ILE 40 A PRO 41 n 17 PRO 41 A GLU 42 n 18 GLU 42 A ASN 43 n 19 ASN 43 A ASN 44 n 20 ASN 44 A PRO 45 n 21 PRO 45 A VAL 46 n 22 VAL 46 A LYS 47 n 23 LYS 47 A LEU 48 n 24 LEU 48 A SER 49 n 25 SER 49 A CYS 50 n 26 CYS 50 A ALA 51 n 27 ALA 51 A TYR 52 n 28 TYR 52 A SER 53 n 29 SER 53 A GLY 54 n 30 GLY 54 A PHE 55 n 31 PHE 55 A SER 56 n 32 SER 56 A SER 57 n 33 SER 57 A PRO 58 n 34 PRO 58 A ARG 59 n 35 ARG 59 A VAL 60 n 36 VAL 60 A GLU 61 n 37 GLU 61 A TRP 62 n 38 TRP 62 A LYS 63 n 39 LYS 63 A PHE 64 n 40 PHE 64 A ASP 65 n 41 ASP 65 A GLN 66 n 42 GLN 66 A GLY 67 n 43 GLY 67 A ASP 68 n 44 ASP 68 A THR 69 n 45 THR 69 A THR 70 n 46 THR 70 A ARG 71 n 47 ARG 71 A LEU 72 n 48 LEU 72 A VAL 73 n 49 VAL 73 A CYS 74 n 50 CYS 74 A TYR 75 n 51 TYR 75 A ASN 76 n 52 ASN 76 A ASN 77 n 53 ASN 77 A LYS 78 n 54 LYS 78 A ILE 79 n 55 ILE 79 A THR 80 n 56 THR 80 A ALA 81 n 57 ALA 81 A SER 82 n 58 SER 82 A TYR 83 n 59 TYR 83 A GLU 84 n 60 GLU 84 A ASP 85 n 61 ASP 85 A ARG 86 n 62 ARG 86 A VAL 87 n 63 VAL 87 A THR 88 n 64 THR 88 A PHE 89 n 65 PHE 89 A LEU 90 n 66 LEU 90 A PRO 91 n 67 PRO 91 A THR 92 n 68 THR 92 A GLY 93 n 69 GLY 93 A ILE 94 n 70 ILE 94 A THR 95 n 71 THR 95 A PHE 96 n 72 PHE 96 A LYS 97 n 73 LYS 97 A SER 98 n 74 SER 98 A VAL 99 n 75 VAL 99 A THR 100 n 76 THR 100 A ARG 101 n 77 ARG 101 A GLU 102 n 78 GLU 102 A ASP 103 n 79 ASP 103 A THR 104 n 80 THR 104 A GLY 105 n 81 GLY 105 A THR 106 n 82 THR 106 A TYR 107 n 83 TYR 107 A THR 108 n 84 THR 108 A CYS 109 n 85 CYS 109 A MET 110 n 86 MET 110 A VAL 111 n 87 VAL 111 A SER 112 n 88 SER 112 A GLU 113 n 89 GLU 113 A GLU 114 n 90 GLU 114 A GLY 115 n 91 GLY 115 A GLY 116 n 92 GLY 116 A ASN 117 n 93 ASN 117 A SER 118 n 94 SER 118 A TYR 119 n 95 TYR 119 A GLY 120 n 96 GLY 120 A GLU 121 n 97 GLU 121 A VAL 122 n 98 VAL 122 A LYS 123 n 99 LYS 123 A VAL 124 n 100 VAL 124 A LYS 125 n 101 LYS 125 A LEU 126 n 102 LEU 126 A ILE 127 n 103 ILE 127 A VAL 128 n 104 VAL 128 A LEU 129 n 105 LEU 129 A VAL 130 n 106 VAL 130 A PRO 131 n 107 PRO 131 A PRO 132 n 108 PRO 132 A SER 133 n 109 SER 133 A LYS 134 n 110 LYS 134 A PRO 135 n 111 PRO 135 A THR 136 n 112 THR 136 A VAL 137 n 113 VAL 137 A ASN 138 n 114 ASN 138 A ILE 139 n 115 ILE 139 A PRO 140 n 116 PRO 140 A SER 141 n 117 SER 141 A SER 142 n 118 SER 142 A ALA 143 n 119 ALA 143 A THR 144 n 120 THR 144 A ILE 145 n 121 ILE 145 A GLY 146 n 122 GLY 146 A ASN 147 n 123 ASN 147 A ARG 148 n 124 ARG 148 A ALA 149 n 125 ALA 149 A VAL 150 n 126 VAL 150 A LEU 151 n 127 LEU 151 A THR 152 n 128 THR 152 A CYS 153 n 129 CYS 153 A SER 154 n 130 SER 154 A GLU 155 n 131 GLU 155 A GLN 156 n 132 GLN 156 A ASP 157 n 133 ASP 157 A GLY 158 n 134 GLY 158 A SER 159 n 135 SER 159 A PRO 160 n 136 PRO 160 A PRO 161 n 137 PRO 161 A SER 162 n 138 SER 162 A GLU 163 n 139 GLU 163 A TYR 164 n 140 TYR 164 A THR 165 n 141 THR 165 A TRP 166 n 142 TRP 166 A PHE 167 n 143 PHE 167 A LYS 168 n 144 LYS 168 A ASP 169 n 145 ASP 169 A GLY 170 n 146 GLY 170 A ILE 171 n 147 ILE 171 A VAL 172 n 148 VAL 172 A MET 173 n 149 MET 173 A PRO 174 n 150 PRO 174 A THR 175 n 151 THR 175 A ASN 176 n 152 ASN 176 A PRO 177 n 153 PRO 177 A LYS 178 n 154 LYS 178 A SER 179 n 155 SER 179 A THR 180 n 156 THR 180 A ARG 181 n 157 ARG 181 A ALA 182 n 158 ALA 182 A PHE 183 n 159 PHE 183 A SER 184 n 160 SER 184 A ASN 185 n 161 ASN 185 A SER 186 n 162 SER 186 A SER 187 n 163 SER 187 A TYR 188 n 164 TYR 188 A VAL 189 n 165 VAL 189 A LEU 190 n 166 LEU 190 A ASN 191 n 167 ASN 191 A PRO 192 n 168 PRO 192 A THR 193 n 169 THR 193 A THR 194 n 170 THR 194 A GLY 195 n 171 GLY 195 A GLU 196 n 172 GLU 196 A LEU 197 n 173 LEU 197 A VAL 198 n 174 VAL 198 A PHE 199 n 175 PHE 199 A ASP 200 n 176 ASP 200 A PRO 201 n 177 PRO 201 A LEU 202 n 178 LEU 202 A SER 203 n 179 SER 203 A ALA 204 n 180 ALA 204 A SER 205 n 181 SER 205 A ASP 206 n 182 ASP 206 A THR 207 n 183 THR 207 A GLY 208 n 184 GLY 208 A GLU 209 n 185 GLU 209 A TYR 210 n 186 TYR 210 A SER 211 n 187 SER 211 A CYS 212 n 188 CYS 212 A GLU 213 n 189 GLU 213 A ALA 214 n 190 ALA 214 A ARG 215 n 191 ARG 215 A ASN 216 n 192 ASN 216 A GLY 217 n 193 GLY 217 A TYR 218 n 194 TYR 218 A GLY 219 n 195 GLY 219 A THR 220 n 196 THR 220 A PRO 221 n 197 PRO 221 A MET 222 n 198 MET 222 A THR 223 n 199 THR 223 A SER 224 n 200 SER 224 A ASN 225 n 201 ASN 225 A ALA 226 n 202 ALA 226 A VAL 227 n 203 VAL 227 A ARG 228 n 204 ARG 228 A MET 229 n 205 MET 229 A GLU 230 n 206 GLU 230 A ALA 231 n 207 ALA 231 A VAL 232 n 208 VAL 232 A GLU 233 n 209 GLU 233 A n 1 25 B MET 26 n 2 MET 26 B GLY 27 n 3 GLY 27 B SER 28 n 4 SER 28 B VAL 29 n 5 VAL 29 B THR 30 n 6 THR 30 B VAL 31 n 7 VAL 31 B HIS 32 n 8 HIS 32 B SER 33 n 9 SER 33 B SER 34 n 10 SER 34 B GLU 35 n 11 GLU 35 B PRO 36 n 12 PRO 36 B GLU 37 n 13 GLU 37 B VAL 38 n 14 VAL 38 B ARG 39 n 15 ARG 39 B ILE 40 n 16 ILE 40 B PRO 41 n 17 PRO 41 B GLU 42 n 18 GLU 42 B ASN 43 n 19 ASN 43 B ASN 44 n 20 ASN 44 B PRO 45 n 21 PRO 45 B VAL 46 n 22 VAL 46 B LYS 47 n 23 LYS 47 B LEU 48 n 24 LEU 48 B SER 49 n 25 SER 49 B CYS 50 n 26 CYS 50 B ALA 51 n 27 ALA 51 B TYR 52 n 28 TYR 52 B SER 53 n 29 SER 53 B GLY 54 n 30 GLY 54 B PHE 55 n 31 PHE 55 B SER 56 n 32 SER 56 B SER 57 n 33 SER 57 B PRO 58 n 34 PRO 58 B ARG 59 n 35 ARG 59 B VAL 60 n 36 VAL 60 B GLU 61 n 37 GLU 61 B TRP 62 n 38 TRP 62 B LYS 63 n 39 LYS 63 B PHE 64 n 40 PHE 64 B ASP 65 n 41 ASP 65 B GLN 66 n 42 GLN 66 B GLY 67 n 43 GLY 67 B ASP 68 n 44 ASP 68 B THR 69 n 45 THR 69 B THR 70 n 46 THR 70 B ARG 71 n 47 ARG 71 B LEU 72 n 48 LEU 72 B VAL 73 n 49 VAL 73 B CYS 74 n 50 CYS 74 B TYR 75 n 51 TYR 75 B ASN 76 n 52 ASN 76 B ASN 77 n 53 ASN 77 B LYS 78 n 54 LYS 78 B ILE 79 n 55 ILE 79 B THR 80 n 56 THR 80 B ALA 81 n 57 ALA 81 B SER 82 n 58 SER 82 B TYR 83 n 59 TYR 83 B GLU 84 n 60 GLU 84 B ASP 85 n 61 ASP 85 B ARG 86 n 62 ARG 86 B VAL 87 n 63 VAL 87 B THR 88 n 64 THR 88 B PHE 89 n 65 PHE 89 B LEU 90 n 66 LEU 90 B PRO 91 n 67 PRO 91 B THR 92 n 68 THR 92 B GLY 93 n 69 GLY 93 B ILE 94 n 70 ILE 94 B THR 95 n 71 THR 95 B PHE 96 n 72 PHE 96 B LYS 97 n 73 LYS 97 B SER 98 n 74 SER 98 B VAL 99 n 75 VAL 99 B THR 100 n 76 THR 100 B ARG 101 n 77 ARG 101 B GLU 102 n 78 GLU 102 B ASP 103 n 79 ASP 103 B THR 104 n 80 THR 104 B GLY 105 n 81 GLY 105 B THR 106 n 82 THR 106 B TYR 107 n 83 TYR 107 B THR 108 n 84 THR 108 B CYS 109 n 85 CYS 109 B MET 110 n 86 MET 110 B VAL 111 n 87 VAL 111 B SER 112 n 88 SER 112 B GLU 113 n 89 GLU 113 B GLU 114 n 90 GLU 114 B GLY 115 n 91 GLY 115 B GLY 116 n 92 GLY 116 B ASN 117 n 93 ASN 117 B SER 118 n 94 SER 118 B TYR 119 n 95 TYR 119 B GLY 120 n 96 GLY 120 B GLU 121 n 97 GLU 121 B VAL 122 n 98 VAL 122 B LYS 123 n 99 LYS 123 B VAL 124 n 100 VAL 124 B LYS 125 n 101 LYS 125 B LEU 126 n 102 LEU 126 B ILE 127 n 103 ILE 127 B VAL 128 n 104 VAL 128 B LEU 129 n 105 LEU 129 B VAL 130 n 106 VAL 130 B PRO 131 n 107 PRO 131 B PRO 132 n 108 PRO 132 B SER 133 n 109 SER 133 B LYS 134 n 110 LYS 134 B PRO 135 n 111 PRO 135 B THR 136 n 112 THR 136 B VAL 137 n 113 VAL 137 B ASN 138 n 114 ASN 138 B ILE 139 n 115 ILE 139 B PRO 140 n 116 PRO 140 B SER 141 n 117 SER 141 B SER 142 n 118 SER 142 B ALA 143 n 119 ALA 143 B THR 144 n 120 THR 144 B ILE 145 n 121 ILE 145 B GLY 146 n 122 GLY 146 B ASN 147 n 123 ASN 147 B ARG 148 n 124 ARG 148 B ALA 149 n 125 ALA 149 B VAL 150 n 126 VAL 150 B LEU 151 n 127 LEU 151 B THR 152 n 128 THR 152 B CYS 153 n 129 CYS 153 B SER 154 n 130 SER 154 B GLU 155 n 131 GLU 155 B GLN 156 n 132 GLN 156 B ASP 157 n 133 ASP 157 B GLY 158 n 134 GLY 158 B SER 159 n 135 SER 159 B PRO 160 n 136 PRO 160 B PRO 161 n 137 PRO 161 B SER 162 n 138 SER 162 B GLU 163 n 139 GLU 163 B TYR 164 n 140 TYR 164 B THR 165 n 141 THR 165 B TRP 166 n 142 TRP 166 B PHE 167 n 143 PHE 167 B LYS 168 n 144 LYS 168 B ASP 169 n 145 ASP 169 B GLY 170 n 146 GLY 170 B ILE 171 n 147 ILE 171 B VAL 172 n 148 VAL 172 B MET 173 n 149 MET 173 B PRO 174 n 150 PRO 174 B THR 175 n 151 THR 175 B ASN 176 n 152 ASN 176 B PRO 177 n 153 PRO 177 B LYS 178 n 154 LYS 178 B SER 179 n 155 SER 179 B THR 180 n 156 THR 180 B ARG 181 n 157 ARG 181 B ALA 182 n 158 ALA 182 B PHE 183 n 159 PHE 183 B SER 184 n 160 SER 184 B ASN 185 n 161 ASN 185 B SER 186 n 162 SER 186 B SER 187 n 163 SER 187 B TYR 188 n 164 TYR 188 B VAL 189 n 165 VAL 189 B LEU 190 n 166 LEU 190 B ASN 191 n 167 ASN 191 B PRO 192 n 168 PRO 192 B THR 193 n 169 THR 193 B THR 194 n 170 THR 194 B GLY 195 n 171 GLY 195 B GLU 196 n 172 GLU 196 B LEU 197 n 173 LEU 197 B VAL 198 n 174 VAL 198 B PHE 199 n 175 PHE 199 B ASP 200 n 176 ASP 200 B PRO 201 n 177 PRO 201 B LEU 202 n 178 LEU 202 B SER 203 n 179 SER 203 B ALA 204 n 180 ALA 204 B SER 205 n 181 SER 205 B ASP 206 n 182 ASP 206 B THR 207 n 183 THR 207 B GLY 208 n 184 GLY 208 B GLU 209 n 185 GLU 209 B TYR 210 n 186 TYR 210 B SER 211 n 187 SER 211 B CYS 212 n 188 CYS 212 B GLU 213 n 189 GLU 213 B ALA 214 n 190 ALA 214 B ARG 215 n 191 ARG 215 B ASN 216 n 192 ASN 216 B GLY 217 n 193 GLY 217 B TYR 218 n 194 TYR 218 B GLY 219 n 195 GLY 219 B THR 220 n 196 THR 220 B PRO 221 n 197 PRO 221 B MET 222 n 198 MET 222 B THR 223 n 199 THR 223 B SER 224 n 200 SER 224 B ASN 225 n 201 ASN 225 B ALA 226 n 202 ALA 226 B VAL 227 n 203 VAL 227 B ARG 228 n 204 ARG 228 B MET 229 n 205 MET 229 B GLU 230 n 206 GLU 230 B ALA 231 n 207 ALA 231 B VAL 232 n 208 VAL 232 B GLU 233 n 209 GLU 233 B author_defined_assembly 2 dimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N THR 30 A N THR 6 A O SER 53 A O SER 29 A N ILE 40 A N ILE 16 A O LEU 129 A O LEU 105 A N LEU 48 A N LEU 24 A O ILE 94 A O ILE 70 A O THR 95 A O THR 71 A N THR 88 A N THR 64 A O THR 69 A O THR 45 A N GLN 66 A N GLN 42 A N LYS 63 A N LYS 39 A O THR 108 A O THR 84 A N VAL 111 A N VAL 87 A O GLY 120 A O GLY 96 A O THR 69 A O THR 45 A N GLN 66 A N GLN 42 A N LYS 63 A N LYS 39 A O THR 108 A O THR 84 A N TYR 107 A N TYR 83 A O VAL 124 A O VAL 100 A N TYR 75 A N TYR 51 A O LYS 78 A O LYS 54 A N ALA 143 A N ALA 119 A O VAL 232 A O VAL 208 A N LEU 151 A N LEU 127 A O LEU 197 A O LEU 173 A N GLU 163 A N GLU 139 A O ARG 215 A O ARG 191 A N ALA 214 A N ALA 190 A O MET 222 A O MET 198 B N THR 30 B N THR 6 B O SER 53 B O SER 29 B N ILE 40 B N ILE 16 B O LEU 129 B O LEU 105 B N LEU 48 B N LEU 24 B O ILE 94 B O ILE 70 B O THR 95 B O THR 71 B N THR 88 B N THR 64 B O THR 69 B O THR 45 B N GLN 66 B N GLN 42 B N LYS 63 B N LYS 39 B O THR 108 B O THR 84 B N VAL 111 B N VAL 87 B O GLY 120 B O GLY 96 B O THR 69 B O THR 45 B N GLN 66 B N GLN 42 B N LYS 63 B N LYS 39 B O THR 108 B O THR 84 B N TYR 107 B N TYR 83 B O VAL 124 B O VAL 100 B N TYR 75 B N TYR 51 B O LYS 78 B O LYS 54 B N ALA 143 B N ALA 119 B O VAL 232 B O VAL 208 B N LEU 151 B N LEU 127 B O LEU 197 B O LEU 173 B N GLU 163 B N GLU 139 B O ARG 215 B O ARG 191 B N ALA 214 B N ALA 190 B O MET 222 B O MET 198 1 B ALA 25 B ALA 1 1 Y 1 B VAL 232 -11.07 1 A TYR 52 0.074 SIDE CHAIN 1 A TYR 164 0.069 SIDE CHAIN 1 B TYR 52 0.074 SIDE CHAIN 1 10.57 1.50 119.30 129.87 A A A C N CA ILE PRO PRO 40 41 41 Y 1 7.89 1.10 114.20 122.09 A A A CA CB SG CYS CYS CYS 153 153 153 N 1 -16.57 2.70 111.00 94.43 A A A N CA C GLU GLU GLU 155 155 155 N 1 -17.89 2.70 111.00 93.11 A A A N CA C GLU GLU GLU 163 163 163 N 1 11.28 1.50 119.30 130.58 A A A C N CA ASN PRO PRO 176 177 177 Y 1 10.49 1.50 119.30 129.79 B B B C N CA ILE PRO PRO 40 41 41 Y 1 7.93 1.10 114.20 122.13 B B B CA CB SG CYS CYS CYS 153 153 153 N 1 -16.61 2.70 111.00 94.39 B B B N CA C GLU GLU GLU 155 155 155 N 1 -17.94 2.70 111.00 93.06 B B B N CA C GLU GLU GLU 163 163 163 N 1 9.01 1.50 119.30 128.31 B B B C N CA MET PRO PRO 173 174 174 Y 1 10.44 1.50 119.30 129.74 B B B C N CA ASN PRO PRO 176 177 177 Y 1 A GLU 35 -115.19 75.96 1 A GLU 37 -150.36 82.71 1 A ASN 43 78.90 -21.28 1 A CYS 50 -163.35 94.06 1 A ASN 77 54.25 14.55 1 A GLU 84 -37.65 -33.42 1 A PHE 96 -100.87 -166.40 1 A TYR 119 175.85 135.51 1 A SER 154 179.79 156.56 1 A GLN 156 -169.04 55.05 1 A ASP 157 -151.94 -25.21 1 A PRO 161 -45.23 166.33 1 A VAL 172 -29.29 133.33 1 A SER 179 73.18 174.57 1 A ARG 181 165.96 -87.11 1 A ALA 182 166.54 -31.38 1 A SER 184 -60.54 23.20 1 A ASN 191 -164.04 90.33 1 A PRO 192 -45.97 -3.17 1 A ASP 200 177.46 87.99 1 A GLU 209 -65.43 90.66 1 B GLU 35 -115.28 75.97 1 B GLU 37 -150.32 82.70 1 B ASN 43 78.95 -21.32 1 B CYS 50 -163.39 94.12 1 B GLU 84 -37.78 -33.34 1 B PHE 96 -100.84 -166.39 1 B TYR 119 175.80 135.50 1 B SER 154 179.75 156.56 1 B GLN 156 -169.17 48.29 1 B ASP 157 -140.20 -25.77 1 B PRO 161 -45.36 166.34 1 B VAL 172 -29.40 133.34 1 B SER 179 76.49 70.33 1 B THR 180 35.58 9.38 1 B ALA 182 -59.10 -8.04 1 B SER 184 -32.26 -37.65 1 B ASN 191 -164.09 90.31 1 B PRO 192 -45.92 -3.19 1 B ASP 200 177.51 88.17 1 B GLU 209 -65.57 90.61 0.305 0.22 0.2201 2.90 30. 970 11454 9736 10 random 1 MOLECULAR REPLACEMENT murine JAM1 structure Engh & Huber 2.90 30. 124 3299 0 0 3175 0.02 2.7 2.90 30.0 1NBQ 11454 9736 3 1,2 85.1 2.90 3.10 51 data reduction DENZO data scaling SCALEPACK phasing AMoRE refinement X-PLOR 3.851 Junctional adhesion molecule 1 Crystal Structure of Human Junctional Adhesion Molecule Type 1 1 N N 1 N N 2 N N 2 N N A SER 203 A SER 179 HELX_P A THR 207 A THR 183 5 1 5 B SER 203 B SER 179 HELX_P B THR 207 B THR 183 5 2 5 disulf 2.060 A CYS 50 A SG CYS 26 1_555 A CYS 109 A SG CYS 85 1_555 disulf 2.059 A CYS 153 A SG CYS 129 1_555 A CYS 212 A SG CYS 188 1_555 disulf 2.060 B CYS 50 B SG CYS 26 1_555 B CYS 109 B SG CYS 85 1_555 disulf 2.058 B CYS 153 B SG CYS 129 1_555 B CYS 212 B SG CYS 188 1_555 IMMUNE SYSTEM reovirus receptor, adhesion molecule, tight junction formation, immunoglobulin superfamily, IMMUNE SYSTEM A SER 159 A SER 135 1 A PRO 160 A PRO 136 -0.63 A ASP 200 A ASP 176 1 A PRO 201 A PRO 177 0.39 B SER 159 B SER 135 1 B PRO 160 B PRO 136 -0.79 B ASP 200 B ASP 176 1 B PRO 201 B PRO 177 0.09 JAM1_HUMAN UNP 1 27 Q9Y624 GSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGT YTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNS SYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEAVE 27 233 1NBQ 27 233 Q9Y624 A 1 3 209 27 233 1NBQ 27 233 Q9Y624 B 1 3 209 1 CLONING ARTIFACT ALA 25 1NBQ A Q9Y624 UNP 1 1 CLONING ARTIFACT MET 26 1NBQ A Q9Y624 UNP 2 2 CLONING ARTIFACT ALA 25 1NBQ B Q9Y624 UNP 1 2 CLONING ARTIFACT MET 26 1NBQ B Q9Y624 UNP 2 2 2 3 4 4 2 2 2 3 2 2 3 4 4 2 2 2 3 anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel A THR 30 A THR 6 A HIS 32 A HIS 8 A ALA 51 A ALA 27 A SER 53 A SER 29 A ILE 40 A ILE 16 A PRO 41 A PRO 17 A VAL 128 A VAL 104 A LEU 129 A LEU 105 A LYS 47 A LYS 23 A SER 49 A SER 25 A GLY 93 A GLY 69 A THR 95 A THR 71 A THR 88 A THR 64 A LEU 90 A LEU 66 A THR 69 A THR 45 A LEU 72 A LEU 48 A PRO 58 A PRO 34 A GLN 66 A GLN 42 A THR 106 A THR 82 A GLU 113 A GLU 89 A TYR 119 A TYR 95 A GLY 120 A GLY 96 A THR 69 A THR 45 A LEU 72 A LEU 48 A PRO 58 A PRO 34 A GLN 66 A GLN 42 A THR 106 A THR 82 A GLU 113 A GLU 89 A LYS 123 A LYS 99 A LYS 125 A LYS 101 A CYS 74 A CYS 50 A TYR 75 A TYR 51 A LYS 78 A LYS 54 A ILE 79 A ILE 55 A SER 142 A SER 118 A THR 144 A THR 120 A GLU 230 A GLU 206 A VAL 232 A VAL 208 A ALA 149 A ALA 125 A LEU 151 A LEU 127 A LEU 197 A LEU 173 A PHE 199 A PHE 175 A GLU 163 A GLU 139 A LYS 168 A LYS 144 A TYR 210 A TYR 186 A ARG 215 A ARG 191 A MET 222 A MET 198 A THR 223 A THR 199 B THR 30 B THR 6 B HIS 32 B HIS 8 B ALA 51 B ALA 27 B SER 53 B SER 29 B ILE 40 B ILE 16 B PRO 41 B PRO 17 B VAL 128 B VAL 104 B LEU 129 B LEU 105 B LYS 47 B LYS 23 B SER 49 B SER 25 B GLY 93 B GLY 69 B THR 95 B THR 71 B THR 88 B THR 64 B LEU 90 B LEU 66 B THR 69 B THR 45 B LEU 72 B LEU 48 B PRO 58 B PRO 34 B GLN 66 B GLN 42 B THR 106 B THR 82 B GLU 113 B GLU 89 B TYR 119 B TYR 95 B GLY 120 B GLY 96 B THR 69 B THR 45 B LEU 72 B LEU 48 B PRO 58 B PRO 34 B GLN 66 B GLN 42 B THR 106 B THR 82 B GLU 113 B GLU 89 B LYS 123 B LYS 99 B LYS 125 B LYS 101 B CYS 74 B CYS 50 B TYR 75 B TYR 51 B LYS 78 B LYS 54 B ILE 79 B ILE 55 B SER 142 B SER 118 B THR 144 B THR 120 B GLU 230 B GLU 206 B VAL 232 B VAL 208 B ALA 149 B ALA 125 B LEU 151 B LEU 127 B LEU 197 B LEU 173 B PHE 199 B PHE 175 B GLU 163 B GLU 139 B LYS 168 B LYS 144 B TYR 210 B TYR 186 B ARG 215 B ARG 191 B MET 222 B MET 198 B THR 223 B THR 199 5 monoclinic C 1 2 1