0.013298 0.000000 0.000000 0.000000 0.017391 0.000000 0.000000 0.000000 0.019048 0.00000 0.00000 0.00000 CIS PROLINE - PRO A 16 CIS PROLINE - PRO A 18 CIS PROLINE - PRO A 47 CIS PROLINE - PRO B 16 CIS PROLINE - PRO B 18 CIS PROLINE - PRO B 47 Shapiro, L. Fannon, A.M. Kwong, P.D. Thompson, A. Lehmann, M.S. Grubel, G. Legrand, J.-F. Als-Nielsen, J. Colman, D.R. Hendrickson, W.A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 75.200 57.500 52.500 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking O2 U 2 270.028 URANYL (VI) ION non-polymer C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 147 N N N 148 S C N 149 N C N 150 N O N 151 S C N 152 N C N 153 N C N 154 N C N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N U N 170 N O N 171 N O N 172 N N N 173 S C N 174 N C N 175 N O N 176 N C N 177 N C N 178 N C N 179 N C N 180 N O N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N N N 195 S C N 196 N C N 197 N O N 198 N C N 199 N C N 200 N C N 201 N C N 202 N N N 203 N O N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N N N 220 S C N 221 N C N 222 N O N 223 N C N 224 N C N 225 N S N 226 N C N 227 N O N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N N N 240 S C N 241 N C N 242 N O N 243 N C Y 244 N C Y 245 N C Y 246 N C Y 247 N C Y 248 N C Y 249 N C N 250 N O N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N N N 263 S C N 264 N C N 265 N O N 266 N C N 267 N C N 268 N C N 269 N O N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N N N 280 S C N 281 N C N 282 N O N 283 N C N 284 N O N 285 N O N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N N N 294 S C N 295 N C N 296 N O N 297 R C N 298 N O N 299 N C N 300 N O N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N N N 311 S C N 312 N C N 313 N O N 314 N C Y 315 N C Y 316 N C Y 317 N C Y 318 N N Y 319 N C Y 320 N C Y 321 N C Y 322 N C Y 323 N C N 324 N O N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N N N 338 S C N 339 N C N 340 N O N 341 N C Y 342 N C Y 343 N C Y 344 N C Y 345 N C Y 346 N C Y 347 N C N 348 N O N 349 N O N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N N N 362 S C N 363 N C N 364 N O N 365 N C N 366 N C N 367 N C N 368 N O N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N doub N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N doub N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N doub N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N doub N 233 N sing N 234 N sing N 235 N sing N 236 N sing Y 237 N doub Y 238 N sing Y 239 N sing N 240 N sing Y 241 N doub N 242 N sing Y 243 N doub N 244 N sing Y 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N doub N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N doub N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N doub N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N doub N 302 N sing N 303 N sing N 304 N sing N 305 N sing Y 306 N doub Y 307 N sing Y 308 N sing N 309 N sing Y 310 N doub Y 311 N sing Y 312 N sing N 313 N sing Y 314 N sing Y 315 N doub N 316 N sing Y 317 N doub N 318 N sing Y 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N doub N 330 N sing N 331 N sing N 332 N sing N 333 N sing Y 334 N doub Y 335 N sing Y 336 N sing N 337 N sing Y 338 N doub N 339 N sing Y 340 N doub N 341 N sing Y 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N doub N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing UK Nature NATUAS 0006 0028-0836 374 327 337 10.1038/374327a0 7885471 Structural basis of cell-cell adhesion by cadherins. 1995 10.2210/pdb1nci/pdb pdb_00001nci 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 IMAGE PLATE 1994-08 FUJI x-ray 1 0.7217 1.0 0.7263 1.0 X4A NSLS 0.7217 - 0.7263 SYNCHROTRON NSLS BEAMLINE X4A 12244.817 N-CADHERIN 2 man polymer 270.028 URANYL (VI) ION 1 syn non-polymer 18.015 water 315 nat water no no GSDWVIPPINLPENSRGPFPQELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRA HAVDINGNQVENPIDIVINVIDMNDNRPEF GSDWVIPPINLPENSRGPFPQELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRA HAVDINGNQVENPIDIVINVIDMNDNRPEF A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n house mouse Mus Escherichia sample 10090 Mus musculus 562 Escherichia coli PGEX-2T PGEX-2T 1 2.32 46.87 5 WAVELENGTH MAD EXPERIMENT; DATA COLLECTED NEAR URANIUM L(III) EDGE chem_comp_atom chem_comp_bond database_2 pdbx_database_status pdbx_struct_special_symmetry struct_ref_seq_dif struct_site repository Initial release Version format compliance Version format compliance Atomic model Data collection Database references Derived calculations Other 1 0 1995-07-10 1 1 2008-03-03 1 2 2011-07-13 1 3 2011-11-16 1 4 2024-02-14 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y BNL 1995-03-23 REL IUM URANYL (VI) ION HOH water THE MODEL INCLUDES ONE URANYL ION (UO2 2+) BOUND AT THE PUTATIVE CALCIUM BINDING SITE. RESIDUE NUMBERING IS FOR THE MATURE PROTEIN. IUM 300 2 IUM IUM 300 A HOH 192 3 HOH HOH 201 A HOH 235 3 HOH HOH 214 A HOH 1 3 HOH HOH 301 A HOH 2 3 HOH HOH 302 A HOH 9 3 HOH HOH 303 A HOH 10 3 HOH HOH 304 A HOH 12 3 HOH HOH 305 A HOH 13 3 HOH HOH 306 A HOH 15 3 HOH HOH 307 A HOH 17 3 HOH HOH 308 A HOH 18 3 HOH HOH 309 A HOH 19 3 HOH HOH 310 A HOH 20 3 HOH HOH 311 A HOH 22 3 HOH HOH 312 A HOH 23 3 HOH HOH 313 A HOH 24 3 HOH HOH 314 A HOH 25 3 HOH HOH 315 A HOH 26 3 HOH HOH 316 A HOH 28 3 HOH HOH 317 A HOH 29 3 HOH HOH 318 A HOH 31 3 HOH HOH 319 A HOH 32 3 HOH HOH 320 A HOH 33 3 HOH HOH 321 A HOH 34 3 HOH HOH 322 A HOH 35 3 HOH HOH 323 A HOH 38 3 HOH HOH 324 A HOH 39 3 HOH HOH 325 A HOH 41 3 HOH HOH 326 A HOH 42 3 HOH HOH 327 A HOH 45 3 HOH HOH 328 A HOH 49 3 HOH HOH 329 A HOH 54 3 HOH HOH 330 A HOH 58 3 HOH HOH 331 A HOH 60 3 HOH HOH 332 A HOH 61 3 HOH HOH 333 A HOH 63 3 HOH HOH 334 A HOH 64 3 HOH HOH 335 A HOH 66 3 HOH HOH 336 A HOH 67 3 HOH HOH 337 A HOH 70 3 HOH HOH 338 A HOH 72 3 HOH HOH 339 A HOH 75 3 HOH HOH 340 A HOH 76 3 HOH HOH 341 A HOH 77 3 HOH HOH 342 A HOH 78 3 HOH HOH 343 A HOH 80 3 HOH HOH 344 A HOH 81 3 HOH HOH 345 A HOH 82 3 HOH HOH 346 A HOH 85 3 HOH HOH 347 A HOH 87 3 HOH HOH 348 A HOH 91 3 HOH HOH 349 A HOH 92 3 HOH HOH 350 A HOH 93 3 HOH HOH 351 A HOH 94 3 HOH HOH 352 A HOH 96 3 HOH HOH 353 A HOH 97 3 HOH HOH 354 A HOH 99 3 HOH HOH 355 A HOH 101 3 HOH HOH 356 A HOH 102 3 HOH HOH 357 A HOH 103 3 HOH HOH 358 A HOH 104 3 HOH HOH 359 A HOH 105 3 HOH HOH 360 A HOH 108 3 HOH HOH 361 A HOH 109 3 HOH HOH 362 A HOH 110 3 HOH HOH 363 A HOH 111 3 HOH HOH 364 A HOH 117 3 HOH HOH 365 A HOH 118 3 HOH HOH 366 A HOH 125 3 HOH HOH 367 A HOH 126 3 HOH HOH 368 A HOH 129 3 HOH HOH 369 A HOH 133 3 HOH HOH 370 A HOH 135 3 HOH HOH 371 A HOH 136 3 HOH HOH 372 A HOH 137 3 HOH HOH 373 A HOH 138 3 HOH HOH 374 A HOH 142 3 HOH HOH 375 A HOH 145 3 HOH HOH 376 A HOH 146 3 HOH HOH 377 A HOH 152 3 HOH HOH 378 A HOH 153 3 HOH HOH 379 A HOH 154 3 HOH HOH 380 A HOH 155 3 HOH HOH 381 A HOH 158 3 HOH HOH 382 A HOH 161 3 HOH HOH 383 A HOH 162 3 HOH HOH 384 A HOH 163 3 HOH HOH 385 A HOH 164 3 HOH HOH 386 A HOH 168 3 HOH HOH 387 A HOH 172 3 HOH HOH 388 A HOH 174 3 HOH HOH 389 A HOH 175 3 HOH HOH 390 A HOH 176 3 HOH HOH 391 A HOH 177 3 HOH HOH 392 A HOH 178 3 HOH HOH 393 A HOH 180 3 HOH HOH 394 A HOH 181 3 HOH HOH 395 A HOH 184 3 HOH HOH 396 A HOH 185 3 HOH HOH 397 A HOH 187 3 HOH HOH 398 A HOH 188 3 HOH HOH 399 A HOH 194 3 HOH HOH 400 A HOH 195 3 HOH HOH 401 A HOH 197 3 HOH HOH 402 A HOH 198 3 HOH HOH 403 A HOH 199 3 HOH HOH 404 A HOH 200 3 HOH HOH 405 A HOH 204 3 HOH HOH 407 A HOH 206 3 HOH HOH 408 A HOH 207 3 HOH HOH 409 A HOH 208 3 HOH HOH 410 A HOH 209 3 HOH HOH 411 A HOH 210 3 HOH HOH 412 A HOH 211 3 HOH HOH 413 A HOH 214 3 HOH HOH 415 A HOH 215 3 HOH HOH 416 A HOH 217 3 HOH HOH 417 A HOH 222 3 HOH HOH 418 A HOH 223 3 HOH HOH 419 A HOH 224 3 HOH HOH 420 A HOH 227 3 HOH HOH 422 A HOH 228 3 HOH HOH 423 A HOH 229 3 HOH HOH 424 A HOH 230 3 HOH HOH 425 A HOH 231 3 HOH HOH 426 A HOH 232 3 HOH HOH 427 A HOH 233 3 HOH HOH 428 A HOH 234 3 HOH HOH 429 A HOH 236 3 HOH HOH 430 A HOH 238 3 HOH HOH 431 A HOH 244 3 HOH HOH 433 A HOH 245 3 HOH HOH 434 A HOH 246 3 HOH HOH 435 A HOH 247 3 HOH HOH 436 A HOH 248 3 HOH HOH 437 A HOH 249 3 HOH HOH 438 A HOH 253 3 HOH HOH 440 A HOH 254 3 HOH HOH 441 A HOH 255 3 HOH HOH 442 A HOH 257 3 HOH HOH 443 A HOH 258 3 HOH HOH 444 A HOH 259 3 HOH HOH 445 A HOH 260 3 HOH HOH 446 A HOH 261 3 HOH HOH 447 A HOH 262 3 HOH HOH 448 A HOH 263 3 HOH HOH 449 A HOH 264 3 HOH HOH 450 A HOH 265 3 HOH HOH 451 A HOH 266 3 HOH HOH 452 A HOH 267 3 HOH HOH 453 A HOH 270 3 HOH HOH 454 A HOH 272 3 HOH HOH 455 A HOH 273 3 HOH HOH 456 A HOH 274 3 HOH HOH 457 A HOH 275 3 HOH HOH 458 A HOH 278 3 HOH HOH 459 A HOH 282 3 HOH HOH 460 A HOH 284 3 HOH HOH 461 A HOH 295 3 HOH HOH 462 A HOH 300 3 HOH HOH 463 A HOH 302 3 HOH HOH 465 A HOH 304 3 HOH HOH 466 A HOH 305 3 HOH HOH 467 A HOH 306 3 HOH HOH 468 A HOH 307 3 HOH HOH 469 A HOH 312 3 HOH HOH 470 A HOH 3 3 HOH HOH 109 B HOH 4 3 HOH HOH 110 B HOH 5 3 HOH HOH 111 B HOH 6 3 HOH HOH 112 B HOH 7 3 HOH HOH 113 B HOH 8 3 HOH HOH 114 B HOH 11 3 HOH HOH 115 B HOH 14 3 HOH HOH 116 B HOH 16 3 HOH HOH 117 B HOH 21 3 HOH HOH 118 B HOH 27 3 HOH HOH 119 B HOH 30 3 HOH HOH 120 B HOH 36 3 HOH HOH 121 B HOH 37 3 HOH HOH 122 B HOH 40 3 HOH HOH 123 B HOH 43 3 HOH HOH 124 B HOH 44 3 HOH HOH 125 B HOH 46 3 HOH HOH 126 B HOH 47 3 HOH HOH 127 B HOH 48 3 HOH HOH 128 B HOH 50 3 HOH HOH 129 B HOH 51 3 HOH HOH 130 B HOH 52 3 HOH HOH 131 B HOH 53 3 HOH HOH 132 B HOH 55 3 HOH HOH 133 B HOH 56 3 HOH HOH 134 B HOH 57 3 HOH HOH 135 B HOH 59 3 HOH HOH 136 B HOH 62 3 HOH HOH 137 B HOH 65 3 HOH HOH 138 B HOH 68 3 HOH HOH 139 B HOH 69 3 HOH HOH 140 B HOH 71 3 HOH HOH 141 B HOH 73 3 HOH HOH 142 B HOH 74 3 HOH HOH 143 B HOH 79 3 HOH HOH 144 B HOH 83 3 HOH HOH 145 B HOH 84 3 HOH HOH 146 B HOH 86 3 HOH HOH 147 B HOH 88 3 HOH HOH 148 B HOH 89 3 HOH HOH 149 B HOH 90 3 HOH HOH 150 B HOH 95 3 HOH HOH 151 B HOH 98 3 HOH HOH 152 B HOH 100 3 HOH HOH 153 B HOH 106 3 HOH HOH 154 B HOH 107 3 HOH HOH 155 B HOH 112 3 HOH HOH 156 B HOH 113 3 HOH HOH 157 B HOH 114 3 HOH HOH 158 B HOH 115 3 HOH HOH 159 B HOH 116 3 HOH HOH 160 B HOH 119 3 HOH HOH 161 B HOH 120 3 HOH HOH 162 B HOH 121 3 HOH HOH 163 B HOH 122 3 HOH HOH 164 B HOH 123 3 HOH HOH 165 B HOH 124 3 HOH HOH 166 B HOH 127 3 HOH HOH 167 B HOH 128 3 HOH HOH 168 B HOH 130 3 HOH HOH 169 B HOH 131 3 HOH HOH 170 B HOH 132 3 HOH HOH 171 B HOH 134 3 HOH HOH 172 B HOH 139 3 HOH HOH 173 B HOH 140 3 HOH HOH 174 B HOH 141 3 HOH HOH 175 B HOH 143 3 HOH HOH 176 B HOH 144 3 HOH HOH 177 B HOH 147 3 HOH HOH 178 B HOH 148 3 HOH HOH 179 B HOH 149 3 HOH HOH 180 B HOH 150 3 HOH HOH 181 B HOH 151 3 HOH HOH 182 B HOH 156 3 HOH HOH 183 B HOH 157 3 HOH HOH 184 B HOH 159 3 HOH HOH 185 B HOH 160 3 HOH HOH 186 B HOH 165 3 HOH HOH 187 B HOH 166 3 HOH HOH 188 B HOH 167 3 HOH HOH 189 B HOH 169 3 HOH HOH 190 B HOH 170 3 HOH HOH 191 B HOH 171 3 HOH HOH 192 B HOH 173 3 HOH HOH 193 B HOH 179 3 HOH HOH 194 B HOH 182 3 HOH HOH 195 B HOH 183 3 HOH HOH 196 B HOH 186 3 HOH HOH 197 B HOH 189 3 HOH HOH 198 B HOH 190 3 HOH HOH 199 B HOH 191 3 HOH HOH 200 B HOH 193 3 HOH HOH 202 B HOH 196 3 HOH HOH 203 B HOH 201 3 HOH HOH 204 B HOH 202 3 HOH HOH 205 B HOH 205 3 HOH HOH 206 B HOH 212 3 HOH HOH 207 B HOH 216 3 HOH HOH 208 B HOH 218 3 HOH HOH 209 B HOH 219 3 HOH HOH 210 B HOH 220 3 HOH HOH 211 B HOH 221 3 HOH HOH 212 B HOH 226 3 HOH HOH 213 B HOH 237 3 HOH HOH 215 B HOH 239 3 HOH HOH 216 B HOH 240 3 HOH HOH 217 B HOH 241 3 HOH HOH 218 B HOH 242 3 HOH HOH 219 B HOH 250 3 HOH HOH 220 B HOH 252 3 HOH HOH 221 B HOH 256 3 HOH HOH 222 B HOH 268 3 HOH HOH 223 B HOH 269 3 HOH HOH 224 B HOH 271 3 HOH HOH 225 B HOH 276 3 HOH HOH 226 B HOH 277 3 HOH HOH 227 B HOH 279 3 HOH HOH 228 B HOH 280 3 HOH HOH 229 B HOH 281 3 HOH HOH 230 B HOH 283 3 HOH HOH 231 B HOH 285 3 HOH HOH 232 B HOH 286 3 HOH HOH 233 B HOH 287 3 HOH HOH 234 B HOH 288 3 HOH HOH 235 B HOH 289 3 HOH HOH 236 B HOH 290 3 HOH HOH 237 B HOH 291 3 HOH HOH 238 B HOH 292 3 HOH HOH 239 B HOH 293 3 HOH HOH 240 B HOH 294 3 HOH HOH 241 B HOH 296 3 HOH HOH 242 B HOH 297 3 HOH HOH 243 B HOH 298 3 HOH HOH 244 B HOH 303 3 HOH HOH 245 B HOH 308 3 HOH HOH 246 B HOH 309 3 HOH HOH 247 B HOH 310 3 HOH HOH 248 B HOH 311 3 HOH HOH 249 B HOH 313 3 HOH HOH 250 B HOH 314 3 HOH HOH 251 B HOH 315 3 HOH HOH 252 B HOH 203 3 HOH HOH 406 B HOH 213 3 HOH HOH 414 B HOH 225 3 HOH HOH 421 B HOH 243 3 HOH HOH 432 B HOH 251 3 HOH HOH 439 B HOH 301 3 HOH HOH 464 B HOH 299 3 HOH HOH 465 B GLY -2 n 1 GLY -2 A SER -1 n 2 SER -1 A ASP 1 n 3 ASP 1 A TRP 2 n 4 TRP 2 A VAL 3 n 5 VAL 3 A ILE 4 n 6 ILE 4 A PRO 5 n 7 PRO 5 A PRO 6 n 8 PRO 6 A ILE 7 n 9 ILE 7 A ASN 8 n 10 ASN 8 A LEU 9 n 11 LEU 9 A PRO 10 n 12 PRO 10 A GLU 11 n 13 GLU 11 A ASN 12 n 14 ASN 12 A SER 13 n 15 SER 13 A ARG 14 n 16 ARG 14 A GLY 15 n 17 GLY 15 A PRO 16 n 18 PRO 16 A PHE 17 n 19 PHE 17 A PRO 18 n 20 PRO 18 A GLN 19 n 21 GLN 19 A GLU 20 n 22 GLU 20 A LEU 21 n 23 LEU 21 A VAL 22 n 24 VAL 22 A ARG 23 n 25 ARG 23 A ILE 24 n 26 ILE 24 A ARG 25 n 27 ARG 25 A SER 26 n 28 SER 26 A GLY 27 n 29 GLY 27 A ARG 28 n 30 ARG 28 A ASP 29 n 31 ASP 29 A LYS 30 n 32 LYS 30 A ASN 31 n 33 ASN 31 A LEU 32 n 34 LEU 32 A SER 33 n 35 SER 33 A LEU 34 n 36 LEU 34 A ARG 35 n 37 ARG 35 A TYR 36 n 38 TYR 36 A SER 37 n 39 SER 37 A VAL 38 n 40 VAL 38 A THR 39 n 41 THR 39 A GLY 40 n 42 GLY 40 A PRO 41 n 43 PRO 41 A GLY 42 n 44 GLY 42 A ALA 43 n 45 ALA 43 A ASP 44 n 46 ASP 44 A GLN 45 n 47 GLN 45 A PRO 46 n 48 PRO 46 A PRO 47 n 49 PRO 47 A THR 48 n 50 THR 48 A GLY 49 n 51 GLY 49 A ILE 50 n 52 ILE 50 A PHE 51 n 53 PHE 51 A ILE 52 n 54 ILE 52 A ILE 53 n 55 ILE 53 A ASN 54 n 56 ASN 54 A PRO 55 n 57 PRO 55 A ILE 56 n 58 ILE 56 A SER 57 n 59 SER 57 A GLY 58 n 60 GLY 58 A GLN 59 n 61 GLN 59 A LEU 60 n 62 LEU 60 A SER 61 n 63 SER 61 A VAL 62 n 64 VAL 62 A THR 63 n 65 THR 63 A LYS 64 n 66 LYS 64 A PRO 65 n 67 PRO 65 A LEU 66 n 68 LEU 66 A ASP 67 n 69 ASP 67 A ARG 68 n 70 ARG 68 A GLU 69 n 71 GLU 69 A LEU 70 n 72 LEU 70 A ILE 71 n 73 ILE 71 A ALA 72 n 74 ALA 72 A ARG 73 n 75 ARG 73 A PHE 74 n 76 PHE 74 A HIS 75 n 77 HIS 75 A LEU 76 n 78 LEU 76 A ARG 77 n 79 ARG 77 A ALA 78 n 80 ALA 78 A HIS 79 n 81 HIS 79 A ALA 80 n 82 ALA 80 A VAL 81 n 83 VAL 81 A ASP 82 n 84 ASP 82 A ILE 83 n 85 ILE 83 A ASN 84 n 86 ASN 84 A GLY 85 n 87 GLY 85 A ASN 86 n 88 ASN 86 A GLN 87 n 89 GLN 87 A VAL 88 n 90 VAL 88 A GLU 89 n 91 GLU 89 A ASN 90 n 92 ASN 90 A PRO 91 n 93 PRO 91 A ILE 92 n 94 ILE 92 A ASP 93 n 95 ASP 93 A ILE 94 n 96 ILE 94 A VAL 95 n 97 VAL 95 A ILE 96 n 98 ILE 96 A ASN 97 n 99 ASN 97 A VAL 98 n 100 VAL 98 A ILE 99 n 101 ILE 99 A ASP 100 n 102 ASP 100 A n 103 101 A n 104 102 A n 105 103 A n 106 104 A n 107 105 A n 108 106 A n 109 107 A n 110 108 A GLY -2 n 1 GLY -2 B SER -1 n 2 SER -1 B ASP 1 n 3 ASP 1 B TRP 2 n 4 TRP 2 B VAL 3 n 5 VAL 3 B ILE 4 n 6 ILE 4 B PRO 5 n 7 PRO 5 B PRO 6 n 8 PRO 6 B ILE 7 n 9 ILE 7 B ASN 8 n 10 ASN 8 B LEU 9 n 11 LEU 9 B PRO 10 n 12 PRO 10 B GLU 11 n 13 GLU 11 B ASN 12 n 14 ASN 12 B SER 13 n 15 SER 13 B ARG 14 n 16 ARG 14 B GLY 15 n 17 GLY 15 B PRO 16 n 18 PRO 16 B PHE 17 n 19 PHE 17 B PRO 18 n 20 PRO 18 B GLN 19 n 21 GLN 19 B GLU 20 n 22 GLU 20 B LEU 21 n 23 LEU 21 B VAL 22 n 24 VAL 22 B ARG 23 n 25 ARG 23 B ILE 24 n 26 ILE 24 B ARG 25 n 27 ARG 25 B SER 26 n 28 SER 26 B n 29 27 B n 30 28 B n 31 29 B n 32 30 B n 33 31 B n 34 32 B SER 33 n 35 SER 33 B LEU 34 n 36 LEU 34 B ARG 35 n 37 ARG 35 B TYR 36 n 38 TYR 36 B SER 37 n 39 SER 37 B VAL 38 n 40 VAL 38 B THR 39 n 41 THR 39 B GLY 40 n 42 GLY 40 B PRO 41 n 43 PRO 41 B GLY 42 n 44 GLY 42 B ALA 43 n 45 ALA 43 B ASP 44 n 46 ASP 44 B GLN 45 n 47 GLN 45 B PRO 46 n 48 PRO 46 B PRO 47 n 49 PRO 47 B THR 48 n 50 THR 48 B GLY 49 n 51 GLY 49 B ILE 50 n 52 ILE 50 B PHE 51 n 53 PHE 51 B ILE 52 n 54 ILE 52 B ILE 53 n 55 ILE 53 B ASN 54 n 56 ASN 54 B PRO 55 n 57 PRO 55 B ILE 56 n 58 ILE 56 B SER 57 n 59 SER 57 B GLY 58 n 60 GLY 58 B GLN 59 n 61 GLN 59 B LEU 60 n 62 LEU 60 B SER 61 n 63 SER 61 B VAL 62 n 64 VAL 62 B THR 63 n 65 THR 63 B LYS 64 n 66 LYS 64 B PRO 65 n 67 PRO 65 B LEU 66 n 68 LEU 66 B ASP 67 n 69 ASP 67 B ARG 68 n 70 ARG 68 B GLU 69 n 71 GLU 69 B LEU 70 n 72 LEU 70 B ILE 71 n 73 ILE 71 B ALA 72 n 74 ALA 72 B ARG 73 n 75 ARG 73 B PHE 74 n 76 PHE 74 B HIS 75 n 77 HIS 75 B LEU 76 n 78 LEU 76 B ARG 77 n 79 ARG 77 B ALA 78 n 80 ALA 78 B HIS 79 n 81 HIS 79 B ALA 80 n 82 ALA 80 B VAL 81 n 83 VAL 81 B ASP 82 n 84 ASP 82 B ILE 83 n 85 ILE 83 B ASN 84 n 86 ASN 84 B GLY 85 n 87 GLY 85 B ASN 86 n 88 ASN 86 B GLN 87 n 89 GLN 87 B VAL 88 n 90 VAL 88 B GLU 89 n 91 GLU 89 B ASN 90 n 92 ASN 90 B PRO 91 n 93 PRO 91 B ILE 92 n 94 ILE 92 B ASP 93 n 95 ASP 93 B ILE 94 n 96 ILE 94 B VAL 95 n 97 VAL 95 B ILE 96 n 98 ILE 96 B ASN 97 n 99 ASN 97 B VAL 98 n 100 VAL 98 B ILE 99 n 101 ILE 99 B ASP 100 n 102 ASP 100 B n 103 101 B n 104 102 B n 105 103 B n 106 104 B n 107 105 B n 108 106 B n 109 107 B n 110 108 B author_and_software_defined_assembly PISA 2 dimeric 2030 -13 10790 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O ILE 7 A O ILE 9 A N ASN 97 A N ASN 99 A O ILE 92 A O ILE 94 A N ALA 78 A N ALA 80 A O ARG 77 A O ARG 79 A N THR 39 A N THR 41 A O ILE 52 A O ILE 54 A N SER 61 A N SER 63 A O LEU 60 A O LEU 62 A N VAL 22 A N VAL 24 B O ILE 7 B O ILE 9 B N ASN 97 B N ASN 99 B O ILE 92 B O ILE 94 B N ALA 78 B N ALA 80 B O ARG 77 B O ARG 79 B N THR 39 B N THR 41 B O ILE 52 B O ILE 54 B N SER 61 B N SER 63 B O LEU 60 B O LEU 62 B N VAL 22 B N VAL 24 1 A HOH 440 D HOH 1 A HOH 463 D HOH 1 B HOH 244 E HOH 1 B HOH 251 E HOH 1 A CD GLU 69 A CD GLU 71 1 Y 1 A OE1 GLU 69 A OE1 GLU 71 1 Y 1 A OE2 GLU 69 A OE2 GLU 71 1 Y 1 B NE ARG 25 B NE ARG 27 1 Y 1 B CZ ARG 25 B CZ ARG 27 1 Y 1 B NH1 ARG 25 B NH1 ARG 27 1 Y 1 B NH2 ARG 25 B NH2 ARG 27 1 Y 1 B CD GLU 69 B CD GLU 71 1 Y 1 B OE1 GLU 69 B OE1 GLU 71 1 Y 1 B OE2 GLU 69 B OE2 GLU 71 1 Y 1 A MET 101 A MET 103 1 Y 1 A ASN 102 A ASN 104 1 Y 1 A ASP 103 A ASP 105 1 Y 1 A ASN 104 A ASN 106 1 Y 1 A ARG 105 A ARG 107 1 Y 1 A PRO 106 A PRO 108 1 Y 1 A GLU 107 A GLU 109 1 Y 1 A PHE 108 A PHE 110 1 Y 1 B GLY 27 B GLY 29 1 Y 1 B ARG 28 B ARG 30 1 Y 1 B ASP 29 B ASP 31 1 Y 1 B LYS 30 B LYS 32 1 Y 1 B ASN 31 B ASN 33 1 Y 1 B LEU 32 B LEU 34 1 Y 1 B MET 101 B MET 103 1 Y 1 B ASN 102 B ASN 104 1 Y 1 B ASP 103 B ASP 105 1 Y 1 B ASN 104 B ASN 106 1 Y 1 B ARG 105 B ARG 107 1 Y 1 B PRO 106 B PRO 108 1 Y 1 B GLU 107 B GLU 109 1 Y 1 B PHE 108 B PHE 110 1 Y 1 B HOH 465 E HOH 0 N 1 3.86 0.50 120.30 124.16 A A A NE CZ NH1 ARG ARG ARG 35 35 35 N 1 -4.53 0.50 120.30 115.77 A A A NE CZ NH2 ARG ARG ARG 35 35 35 N 1 -3.40 0.50 120.30 116.90 B B B NE CZ NH2 ARG ARG ARG 68 68 68 N 1 A ASP 1 166.17 100.71 1 A ALA 43 -106.30 -91.09 1 B ALA 43 -108.74 -90.69 17.1 0.253 0.195 0.195 2.1 5.0 31010 96.2 1 2.0 2.1 5.0 315 1875 3 0 1557 0.013 1.81 1NCI 33075 2. 0.038 1 95.7 model building X-PLOR refinement X-PLOR data reduction DENZO phasing X-PLOR STRUCTURAL BASIS OF CELL-CELL ADHESION BY CADHERINS 1 N N 1 N N 2 N N 3 N N 3 N N THE ASYMMETRIC UNIT (MOLECULES A AND B) COMPRISE A CADHERIN STRAND DIMER. AN ADHESION DIMER IS FORMED, FOR EXAMPLE, BETWEEN MOLECULE A AND THE (X + 1/2, 3/2 - Y, -1 -Z) SYMMETRY MATE OF MOLECULE B. SYMMETRY THE CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS PRESENTED BELOW GENERATE THE SUBUNITS OF THE POLYMERIC MOLECULE. APPLIED TO RESIDUES: B 1 .. 100 ADHESION DIMER MATE OF MOLECULE A IS A SYMMETRY-MATE OF MOLECULE B, AND CAN BE GENERATED BY THE FOLLOWING TRANSFORMATION: SYMMETRY1 1 1.000000 0.000000 0.000000 37.60000 SYMMETRY2 1 0.000000 1.500000 0.000000 86.25000 SYMMETRY3 1 0.000000 0.000000 1.000000 -52.50000 A GLY 27 A GLY 29 HELX_P A LYS 30 A LYS 32 5 1 4 CELL ADHESION PROTEIN CADHERIN, CELL ADHESION PROTEIN A GLY 15 A GLY 17 1 A PRO 16 A PRO 18 -0.03 A PHE 17 A PHE 19 1 A PRO 18 A PRO 20 -0.03 A PRO 46 A PRO 48 1 A PRO 47 A PRO 49 -0.63 B GLY 15 B GLY 17 1 B PRO 16 B PRO 18 0.68 B PHE 17 B PHE 19 1 B PRO 18 B PRO 20 -0.29 B PRO 46 B PRO 48 1 B PRO 47 B PRO 49 -0.99 CADH2_MOUSE UNP 1 1 P15116 MCRIAGGRGTLLPLLAALLQASVEASGEIALCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNRKRKVQYESSEPADFK VDEDGTVYAVRSFPLTAEQAKFLIYAQDKETQEKWQVAVNLSREPTLTEEPMKEPHEIEEIVFPRQLAKHSGALQRQKRD WVIPPINLPENSRGPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAV DINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNM FTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTDVNDNPPEFTAMTFYGEVPENRVDVIV ANLTVTDKDQPHTPAWNAAYRISGGDPTGRFAILTDPNSNDGLVTVVKPIDFETNRMFVLTVAAENQVPLAKGIQHPPQS TATVSVTVIDVNENPYFAPNPKIIRQEEGLHAGTMLTTLTAQDPDRYMQQNIRYTKLSDPANWLKIDPVNGQITTIAVLD RESPYVQNNIYNATFLASDNGIPPMSGTGTLQIYLLDINDNAPQVLPQEAETCETPEPNSINIAALDYDIDPNAGPFAFD LPLSPVTIKRNWTINRLNGDFAQLNLKIKFLEAGIYEVPIIITDSGNPPKSNISILRVKVCQCDSNGDCTDVDRIVGAGL GTGAIIAILLCIIILLILVLMFVVWMKRRDKERQAKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDTVEPDA IKPVGIRRLDERPIHAEPQYPVRSAAPHPGDIGDFINEGLKAADNDPTAPPYDSLLVFDYEGSGSTAGSLSSLNSSSSGG DQDYDYLNDWGPRFKKLADMYGGGDD 160 267 1NCI 1 108 P15116 A 1 3 110 160 267 1NCI 1 108 P15116 B 1 3 110 1 ASP cloning artifact GLY 27 1NCI A P15116 UNP 186 29 2 ASP cloning artifact GLY 27 1NCI B P15116 UNP 186 29 4 3 4 3 parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel A ILE 7 A ILE 9 A PRO 10 A PRO 12 A ILE 92 A ILE 94 A ILE 99 A ILE 101 A ARG 73 A ARG 75 A VAL 81 A VAL 83 A ARG 35 A ARG 37 A THR 39 A THR 41 A PHE 51 A PHE 53 A ILE 53 A ILE 55 A GLN 59 A GLN 61 A VAL 62 A VAL 64 A GLN 19 A GLN 21 A ARG 23 A ARG 25 B ILE 7 B ILE 9 B PRO 10 B PRO 12 B ILE 92 B ILE 94 B ILE 99 B ILE 101 B ARG 73 B ARG 75 B ASP 82 B ASP 84 B LEU 34 B LEU 36 B THR 39 B THR 41 B PHE 51 B PHE 53 B ILE 53 B ILE 55 B GLN 59 B GLN 61 B VAL 62 B VAL 64 B GLN 19 B GLN 21 B ARG 23 B ARG 25 Unknown 1 BINDING SITE FOR RESIDUE IUM A 300 A IUM 300 Software 10 A IUM 300 C IUM 1 1_555 A GLU 11 A GLU 13 10 1_555 A ASN 12 A ASN 14 10 1_555 A ASP 67 A ASP 69 10 1_555 A ARG 68 A ARG 70 10 1_555 A GLU 69 A GLU 71 10 1_555 B GLU 11 B GLU 13 10 3_543 B ASP 67 B ASP 69 10 3_543 B ARG 68 B ARG 70 10 3_543 B GLU 69 B GLU 71 10 3_543 B HOH 142 E HOH 10 3_543 18 P 21 21 2