1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Politou, A.S.
Pastore, A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
276
189
202
10.1006/jmbi.1997.1521
9514727
SH3 in muscles: solution structure of the SH3 domain from nebulin.
1998
10.2210/pdb1neb/pdb
pdb_00001neb
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
6614.411
NEBULIN
SH3 DOMAIN
1
man
polymer
no
no
TAGKIFRAMYDYMAADADEVSFKDGDAIINVQAIDEGWMYGTVQRTGRTGMLPANYVEAI
TAGKIFRAMYDYMAADADEVSFKDGDAIINVQAIDEGWMYGTVQRTGRTGMLPANYVEAI
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
sample
BL21
9606
Homo sapiens
562
Escherichia coli
BL21 (DE3)-[PLYSS]
PET
BL21
database_2
pdbx_database_status
pdbx_struct_assembly
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Other
1
0
1997-12-24
1
1
2008-03-24
1
2
2011-07-13
1
3
2022-02-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
Y
BNL
1997-08-07
REL
LEAST RESTRAINT VIOLATION
100
1
NOESY
TOCSY
DQF-COSY
6.9
300
K
REFINEMENT DETAILS ARE IN THE SUBMITTED PAPER.
DISTANCE GEOMETRY, SIMULATED ANNEALING
BRUNGER
refinement
X-PLOR
3.1
structure solution
BRUKER UXNMR
UXNMR
500
Bruker
AMX
600
Bruker
AMX
THR
1
n
1
THR
1
A
ALA
2
n
2
ALA
2
A
GLY
3
n
3
GLY
3
A
LYS
4
n
4
LYS
4
A
ILE
5
n
5
ILE
5
A
PHE
6
n
6
PHE
6
A
ARG
7
n
7
ARG
7
A
ALA
8
n
8
ALA
8
A
MET
9
n
9
MET
9
A
TYR
10
n
10
TYR
10
A
ASP
11
n
11
ASP
11
A
TYR
12
n
12
TYR
12
A
MET
13
n
13
MET
13
A
ALA
14
n
14
ALA
14
A
ALA
15
n
15
ALA
15
A
ASP
16
n
16
ASP
16
A
ALA
17
n
17
ALA
17
A
ASP
18
n
18
ASP
18
A
GLU
19
n
19
GLU
19
A
VAL
20
n
20
VAL
20
A
SER
21
n
21
SER
21
A
PHE
22
n
22
PHE
22
A
LYS
23
n
23
LYS
23
A
ASP
24
n
24
ASP
24
A
GLY
25
n
25
GLY
25
A
ASP
26
n
26
ASP
26
A
ALA
27
n
27
ALA
27
A
ILE
28
n
28
ILE
28
A
ILE
29
n
29
ILE
29
A
ASN
30
n
30
ASN
30
A
VAL
31
n
31
VAL
31
A
GLN
32
n
32
GLN
32
A
ALA
33
n
33
ALA
33
A
ILE
34
n
34
ILE
34
A
ASP
35
n
35
ASP
35
A
GLU
36
n
36
GLU
36
A
GLY
37
n
37
GLY
37
A
TRP
38
n
38
TRP
38
A
MET
39
n
39
MET
39
A
TYR
40
n
40
TYR
40
A
GLY
41
n
41
GLY
41
A
THR
42
n
42
THR
42
A
VAL
43
n
43
VAL
43
A
GLN
44
n
44
GLN
44
A
ARG
45
n
45
ARG
45
A
THR
46
n
46
THR
46
A
GLY
47
n
47
GLY
47
A
ARG
48
n
48
ARG
48
A
THR
49
n
49
THR
49
A
GLY
50
n
50
GLY
50
A
MET
51
n
51
MET
51
A
LEU
52
n
52
LEU
52
A
PRO
53
n
53
PRO
53
A
ALA
54
n
54
ALA
54
A
ASN
55
n
55
ASN
55
A
TYR
56
n
56
TYR
56
A
VAL
57
n
57
VAL
57
A
GLU
58
n
58
GLU
58
A
ALA
59
n
59
ALA
59
A
ILE
60
n
60
ILE
60
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
ARG
7
0.309
SIDE CHAIN
1
A
ARG
45
0.283
SIDE CHAIN
1
A
ARG
48
0.232
SIDE CHAIN
1
A
ALA
2
-162.21
61.88
1
A
LYS
4
-57.69
174.98
1
A
GLU
19
-129.08
-168.19
1
A
VAL
20
-118.75
-158.94
1
A
ILE
34
-82.20
-73.37
1
A
ASP
35
-174.89
-68.71
1
A
TRP
38
53.31
177.37
1
A
MET
39
-134.66
-157.86
model building
X-PLOR
3.1
refinement
X-PLOR
3.1
phasing
X-PLOR
3.1
SH3 DOMAIN FROM HUMAN NEBULIN, NMR, MINIMIZED AVERAGE STRUCTURE
1
Y
N
A
ALA
54
A
ALA
54
HELX_P
ONE TURN
A
TYR
56
A
TYR
56
5
H
3
SH3 DOMAIN
SH3 DOMAIN, NEBULIN, Z-DISK ASSEMBLY, ACTIN-BINDING
NEBU_HUMAN
UNP
1
1
P20929
VAYRKDAKENLHYTTVADRPDIKKATQAAKQASEVEYRAKHRKEGSHGLSMLGRPDIEMAKKAAKLSSQVKYRENFDKEK
GKTPKYNPKDSQLYKVMKDANNLASEVKYKADLKKLHKPVTDMKESLIMNHVLNTSQLASSYQYKKKYEKSKGHYHTIPD
NLEQLHLKEATELQSIVKYKEKYEKERGKPMLDFETPTYITAKESQQMQSGKEYRKDYEESIKGRNLTGLEVTPALLHVK
YATKIASEKEYRKDLEESIRGKGLTEMEDTPDMLRAKNATQILNEKEYKRDLELEVKGRGLNAMANETPDFMRARNATDI
ASQIKYKQSAEMEKANFTSVVDTPEIIHAQQVKNLSSQKKYKEDAEKSMSYYETVLDTPEIQRVRENQKNFSLLQYQCDL
KNSKGKITVVQDTPEILRVKENQKNFSSVLYKEDVSPGTAIGKTPEMMRVKQTQDHISSVKYKEAIGQGTPIPDLPEVKR
VKETQKHISSVMYKENLGTGIPTTVTPEIERVKRNQENFSSVLYKENLGKGIPTPITPEMERVKRNQENFSSVLYKENMG
KGTPLPVTPEMERVKHNQENISSVLYKENMGKGTPLPVTPEMERVKHNQENISSVLYKENVGKATATPVTPEMQRVKRNQ
ENISSVLYKENLGKATPTPFTPEMERVKRNQENFSSVLYKENMRKATPTPVTPEMERAKRNQENISSVLYSDSFRKQIQG
KAAYVLDTPEMRRVRETQRHISTVKYHEDFEKHKGCFTPVVTDPITERVKKNMQDFSDINYRGIQRKVVEMEQKRNDQDQ
ETITGLRVWRTNPGSVFDYDPAEDNIQSRSLHMINVQAQRRSREQSRSASALSISGGEEKSEHSEAPDHHLSTYSDGGVF
AVSTAYKHAKTTELPQQRSSSVATQQTTVSSIPSHPSTAGKIFRAMYDYMAADADEVSFKDGDAIINVQAIDEGWMYGTV
QRTGRTGMLPANYVEAI
918
977
1NEB
1
60
P20929
A
1
1
60
1
1
1
1
1
1
2
anti-parallel
A
PHE
6
A
PHE
6
A
MET
9
A
MET
9
A
GLN
32
A
GLN
32
A
ILE
34
A
ILE
34
A
ALA
27
A
ALA
27
A
ILE
29
A
ILE
29
A
TRP
38
A
TRP
38
A
VAL
43
A
VAL
43
A
VAL
57
A
VAL
57
A
ILE
60
A
ILE
60
A
ARG
48
A
ARG
48
A
PRO
53
A
PRO
53
A
ASP
11
A
ASP
11
A
ALA
14
A
ALA
14
A
SER
21
A
SER
21
A
ASP
24
A
ASP
24
1
P 1