0.024623 0.000000 0.000000 0.000000 0.018632 0.000000 0.000000 0.000000 0.011793 0.00000 0.00000 0.00000 Rupp, B. Parkin, S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 40.613 53.671 84.795 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Nat.Struct.Biol. NSBIEW 2024 1072-8368 3 718 722 10.1038/nsb0896-718 8756331 Novel mechanism for defective receptor binding of apolipoprotein E2 in type III hyperlipoproteinemia. 1996 10.2210/pdb1nfo/pdb pdb_00001nfo 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 130 1 AREA DETECTOR ADSC GRAPHITE(002) M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RUH2R 22064.021 APOLIPOPROTEIN E2 22KD RECEPTOR BINDING DOMAIN D154A 1 man polymer 18.015 water 141 nat water APOE2 no no KVEQAVETEPEPELRQQTEWQSGQRWELALGRFWDYLRWVQTLSEQVQEELLSSQVTQELRALMDETMKELKAYKSELEE QLTPVAEETRARLSKELQAAQARLGADMEDVCGRLVQYRGEVQAMLGQSTEELRVRLASHLRKLRKRLLRDADALQKCLA VYQAGAREGAERGLSAIRERLGPLVEQGRVR KVEQAVETEPEPELRQQTEWQSGQRWELALGRFWDYLRWVQTLSEQVQEELLSSQVTQELRALMDETMKELKAYKSELEE QLTPVAEETRARLSKELQAAQARLGADMEDVCGRLVQYRGEVQAMLGQSTEELRVRLASHLRKLRKRLLRDADALQKCLA VYQAGAREGAERGLSAIRERLGPLVEQGRVR A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia sample E2 9606 PLASMA Homo sapiens 562 Escherichia coli 1 3.07 59.9 database_2 struct_ref_seq_dif pdbx_initial_refinement_model repository Initial release Version format compliance Version format compliance Database references Refinement description 1 0 1997-01-27 1 1 2008-03-24 1 2 2011-07-13 1 3 2021-11-03 1 4 2023-08-09 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details Y BNL 1996-07-17 REL REL HOH water 1NFN PHASING MODEL DERIVED FROM 1NFN PDB experimental model HOH 200 2 HOH HOH 200 A HOH 201 2 HOH HOH 201 A HOH 202 2 HOH HOH 202 A HOH 203 2 HOH HOH 203 A HOH 204 2 HOH HOH 204 A HOH 205 2 HOH HOH 205 A HOH 206 2 HOH HOH 206 A HOH 207 2 HOH HOH 207 A HOH 208 2 HOH HOH 208 A HOH 209 2 HOH HOH 209 A HOH 210 2 HOH HOH 210 A HOH 211 2 HOH HOH 211 A HOH 212 2 HOH HOH 212 A HOH 213 2 HOH HOH 213 A HOH 214 2 HOH HOH 214 A HOH 215 2 HOH HOH 215 A HOH 216 2 HOH HOH 216 A HOH 217 2 HOH HOH 217 A HOH 220 2 HOH HOH 220 A HOH 221 2 HOH HOH 221 A HOH 222 2 HOH HOH 222 A HOH 223 2 HOH HOH 223 A HOH 224 2 HOH HOH 224 A HOH 225 2 HOH HOH 225 A HOH 226 2 HOH HOH 226 A HOH 227 2 HOH HOH 227 A HOH 228 2 HOH HOH 228 A HOH 229 2 HOH HOH 229 A HOH 230 2 HOH HOH 230 A HOH 231 2 HOH HOH 231 A HOH 232 2 HOH HOH 232 A HOH 233 2 HOH HOH 233 A HOH 234 2 HOH HOH 234 A HOH 235 2 HOH HOH 235 A HOH 236 2 HOH HOH 236 A HOH 237 2 HOH HOH 237 A HOH 238 2 HOH HOH 238 A HOH 239 2 HOH HOH 239 A HOH 240 2 HOH HOH 240 A HOH 241 2 HOH HOH 241 A HOH 242 2 HOH HOH 242 A HOH 243 2 HOH HOH 243 A HOH 244 2 HOH HOH 244 A HOH 245 2 HOH HOH 245 A HOH 246 2 HOH HOH 246 A HOH 247 2 HOH HOH 247 A HOH 248 2 HOH HOH 248 A HOH 249 2 HOH HOH 249 A HOH 250 2 HOH HOH 250 A HOH 251 2 HOH HOH 251 A HOH 252 2 HOH HOH 252 A HOH 253 2 HOH HOH 253 A HOH 254 2 HOH HOH 254 A HOH 255 2 HOH HOH 255 A HOH 256 2 HOH HOH 256 A HOH 257 2 HOH HOH 257 A HOH 258 2 HOH HOH 258 A HOH 259 2 HOH HOH 259 A HOH 260 2 HOH HOH 260 A HOH 261 2 HOH HOH 261 A HOH 262 2 HOH HOH 262 A HOH 263 2 HOH HOH 263 A HOH 264 2 HOH HOH 264 A HOH 265 2 HOH HOH 265 A HOH 266 2 HOH HOH 266 A HOH 267 2 HOH HOH 267 A HOH 268 2 HOH HOH 268 A HOH 269 2 HOH HOH 269 A HOH 270 2 HOH HOH 270 A HOH 271 2 HOH HOH 271 A HOH 272 2 HOH HOH 272 A HOH 273 2 HOH HOH 273 A HOH 274 2 HOH HOH 274 A HOH 275 2 HOH HOH 275 A HOH 276 2 HOH HOH 276 A HOH 277 2 HOH HOH 277 A HOH 278 2 HOH HOH 278 A HOH 279 2 HOH HOH 279 A HOH 280 2 HOH HOH 280 A HOH 281 2 HOH HOH 281 A HOH 282 2 HOH HOH 282 A HOH 283 2 HOH HOH 283 A HOH 284 2 HOH HOH 284 A HOH 285 2 HOH HOH 285 A HOH 286 2 HOH HOH 286 A HOH 287 2 HOH HOH 287 A HOH 288 2 HOH HOH 288 A HOH 289 2 HOH HOH 289 A HOH 290 2 HOH HOH 290 A HOH 291 2 HOH HOH 291 A HOH 292 2 HOH HOH 292 A HOH 293 2 HOH HOH 293 A HOH 294 2 HOH HOH 294 A HOH 295 2 HOH HOH 295 A HOH 296 2 HOH HOH 296 A HOH 297 2 HOH HOH 297 A HOH 298 2 HOH HOH 298 A HOH 299 2 HOH HOH 299 A HOH 300 2 HOH HOH 300 A HOH 301 2 HOH HOH 301 A HOH 302 2 HOH HOH 302 A HOH 303 2 HOH HOH 303 A HOH 304 2 HOH HOH 304 A HOH 305 2 HOH HOH 305 A HOH 306 2 HOH HOH 306 A HOH 307 2 HOH HOH 307 A HOH 308 2 HOH HOH 308 A HOH 309 2 HOH HOH 309 A HOH 310 2 HOH HOH 310 A HOH 311 2 HOH HOH 311 A HOH 312 2 HOH HOH 312 A HOH 313 2 HOH HOH 313 A HOH 314 2 HOH HOH 314 A HOH 315 2 HOH HOH 315 A HOH 316 2 HOH HOH 316 A HOH 317 2 HOH HOH 317 A HOH 318 2 HOH HOH 318 A HOH 319 2 HOH HOH 319 A HOH 320 2 HOH HOH 320 A HOH 321 2 HOH HOH 321 A HOH 322 2 HOH HOH 322 A HOH 323 2 HOH HOH 323 A HOH 324 2 HOH HOH 324 A HOH 325 2 HOH HOH 325 A HOH 326 2 HOH HOH 326 A HOH 327 2 HOH HOH 327 A HOH 328 2 HOH HOH 328 A HOH 329 2 HOH HOH 329 A HOH 330 2 HOH HOH 330 A HOH 331 2 HOH HOH 331 A HOH 332 2 HOH HOH 332 A HOH 333 2 HOH HOH 333 A HOH 334 2 HOH HOH 334 A HOH 335 2 HOH HOH 335 A HOH 336 2 HOH HOH 336 A HOH 337 2 HOH HOH 337 A HOH 338 2 HOH HOH 338 A HOH 339 2 HOH HOH 339 A HOH 340 2 HOH HOH 340 A HOH 341 2 HOH HOH 341 A HOH 342 2 HOH HOH 342 A n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A n 6 6 A n 7 7 A n 8 8 A n 9 9 A n 10 10 A n 11 11 A n 12 12 A n 13 13 A n 14 14 A n 15 15 A n 16 16 A n 17 17 A n 18 18 A n 19 19 A n 20 20 A n 21 21 A n 22 22 A GLY 23 n 23 GLY 23 A GLN 24 n 24 GLN 24 A ARG 25 n 25 ARG 25 A TRP 26 n 26 TRP 26 A GLU 27 n 27 GLU 27 A LEU 28 n 28 LEU 28 A ALA 29 n 29 ALA 29 A LEU 30 n 30 LEU 30 A GLY 31 n 31 GLY 31 A ARG 32 n 32 ARG 32 A PHE 33 n 33 PHE 33 A TRP 34 n 34 TRP 34 A ASP 35 n 35 ASP 35 A TYR 36 n 36 TYR 36 A LEU 37 n 37 LEU 37 A ARG 38 n 38 ARG 38 A TRP 39 n 39 TRP 39 A VAL 40 n 40 VAL 40 A GLN 41 n 41 GLN 41 A THR 42 n 42 THR 42 A LEU 43 n 43 LEU 43 A SER 44 n 44 SER 44 A GLU 45 n 45 GLU 45 A GLN 46 n 46 GLN 46 A VAL 47 n 47 VAL 47 A GLN 48 n 48 GLN 48 A GLU 49 n 49 GLU 49 A GLU 50 n 50 GLU 50 A LEU 51 n 51 LEU 51 A LEU 52 n 52 LEU 52 A SER 53 n 53 SER 53 A SER 54 n 54 SER 54 A GLN 55 n 55 GLN 55 A VAL 56 n 56 VAL 56 A THR 57 n 57 THR 57 A GLN 58 n 58 GLN 58 A GLU 59 n 59 GLU 59 A LEU 60 n 60 LEU 60 A ARG 61 n 61 ARG 61 A ALA 62 n 62 ALA 62 A LEU 63 n 63 LEU 63 A MET 64 n 64 MET 64 A ASP 65 n 65 ASP 65 A GLU 66 n 66 GLU 66 A THR 67 n 67 THR 67 A MET 68 n 68 MET 68 A LYS 69 n 69 LYS 69 A GLU 70 n 70 GLU 70 A LEU 71 n 71 LEU 71 A LYS 72 n 72 LYS 72 A ALA 73 n 73 ALA 73 A TYR 74 n 74 TYR 74 A LYS 75 n 75 LYS 75 A SER 76 n 76 SER 76 A GLU 77 n 77 GLU 77 A LEU 78 n 78 LEU 78 A GLU 79 n 79 GLU 79 A GLU 80 n 80 GLU 80 A GLN 81 n 81 GLN 81 A n 82 82 A n 83 83 A n 84 84 A n 85 85 A n 86 86 A n 87 87 A n 88 88 A n 89 89 A n 90 90 A n 91 91 A ARG 92 n 92 ARG 92 A LEU 93 n 93 LEU 93 A SER 94 n 94 SER 94 A LYS 95 n 95 LYS 95 A GLU 96 n 96 GLU 96 A LEU 97 n 97 LEU 97 A GLN 98 n 98 GLN 98 A ALA 99 n 99 ALA 99 A ALA 100 n 100 ALA 100 A GLN 101 n 101 GLN 101 A ALA 102 n 102 ALA 102 A ARG 103 n 103 ARG 103 A LEU 104 n 104 LEU 104 A GLY 105 n 105 GLY 105 A ALA 106 n 106 ALA 106 A ASP 107 n 107 ASP 107 A MET 108 n 108 MET 108 A GLU 109 n 109 GLU 109 A ASP 110 n 110 ASP 110 A VAL 111 n 111 VAL 111 A CYS 112 n 112 CYS 112 A GLY 113 n 113 GLY 113 A ARG 114 n 114 ARG 114 A LEU 115 n 115 LEU 115 A VAL 116 n 116 VAL 116 A GLN 117 n 117 GLN 117 A TYR 118 n 118 TYR 118 A ARG 119 n 119 ARG 119 A GLY 120 n 120 GLY 120 A GLU 121 n 121 GLU 121 A VAL 122 n 122 VAL 122 A GLN 123 n 123 GLN 123 A ALA 124 n 124 ALA 124 A MET 125 n 125 MET 125 A LEU 126 n 126 LEU 126 A GLY 127 n 127 GLY 127 A GLN 128 n 128 GLN 128 A SER 129 n 129 SER 129 A THR 130 n 130 THR 130 A GLU 131 n 131 GLU 131 A GLU 132 n 132 GLU 132 A LEU 133 n 133 LEU 133 A ARG 134 n 134 ARG 134 A VAL 135 n 135 VAL 135 A ARG 136 n 136 ARG 136 A LEU 137 n 137 LEU 137 A ALA 138 n 138 ALA 138 A SER 139 n 139 SER 139 A HIS 140 n 140 HIS 140 A LEU 141 n 141 LEU 141 A ARG 142 n 142 ARG 142 A LYS 143 n 143 LYS 143 A LEU 144 n 144 LEU 144 A ARG 145 n 145 ARG 145 A LYS 146 n 146 LYS 146 A ARG 147 n 147 ARG 147 A LEU 148 n 148 LEU 148 A LEU 149 n 149 LEU 149 A ARG 150 n 150 ARG 150 A ASP 151 n 151 ASP 151 A ALA 152 n 152 ALA 152 A ASP 153 n 153 ASP 153 A ALA 154 n 154 ALA 154 A LEU 155 n 155 LEU 155 A GLN 156 n 156 GLN 156 A LYS 157 n 157 LYS 157 A CYS 158 n 158 CYS 158 A LEU 159 n 159 LEU 159 A ALA 160 n 160 ALA 160 A VAL 161 n 161 VAL 161 A TYR 162 n 162 TYR 162 A GLN 163 n 163 GLN 163 A n 164 164 A n 165 165 A n 166 166 A n 167 167 A n 168 168 A n 169 169 A n 170 170 A n 171 171 A n 172 172 A n 173 173 A n 174 174 A n 175 175 A n 176 176 A n 177 177 A n 178 178 A n 179 179 A n 180 180 A n 181 181 A n 182 182 A n 183 183 A n 184 184 A n 185 185 A n 186 186 A n 187 187 A n 188 188 A n 189 189 A n 190 190 A n 191 191 A 0.2060000 0.2210000 0.2060000 0.2700000 1248 10. author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A LYS 1 A LYS 1 1 Y 1 A VAL 2 A VAL 2 1 Y 1 A GLU 3 A GLU 3 1 Y 1 A GLN 4 A GLN 4 1 Y 1 A ALA 5 A ALA 5 1 Y 1 A VAL 6 A VAL 6 1 Y 1 A GLU 7 A GLU 7 1 Y 1 A THR 8 A THR 8 1 Y 1 A GLU 9 A GLU 9 1 Y 1 A PRO 10 A PRO 10 1 Y 1 A GLU 11 A GLU 11 1 Y 1 A PRO 12 A PRO 12 1 Y 1 A GLU 13 A GLU 13 1 Y 1 A LEU 14 A LEU 14 1 Y 1 A ARG 15 A ARG 15 1 Y 1 A GLN 16 A GLN 16 1 Y 1 A GLN 17 A GLN 17 1 Y 1 A THR 18 A THR 18 1 Y 1 A GLU 19 A GLU 19 1 Y 1 A TRP 20 A TRP 20 1 Y 1 A GLN 21 A GLN 21 1 Y 1 A SER 22 A SER 22 1 Y 1 A LEU 82 A LEU 82 1 Y 1 A THR 83 A THR 83 1 Y 1 A PRO 84 A PRO 84 1 Y 1 A VAL 85 A VAL 85 1 Y 1 A ALA 86 A ALA 86 1 Y 1 A GLU 87 A GLU 87 1 Y 1 A GLU 88 A GLU 88 1 Y 1 A THR 89 A THR 89 1 Y 1 A ARG 90 A ARG 90 1 Y 1 A ALA 91 A ALA 91 1 Y 1 A ALA 164 A ALA 164 1 Y 1 A GLY 165 A GLY 165 1 Y 1 A ALA 166 A ALA 166 1 Y 1 A ARG 167 A ARG 167 1 Y 1 A GLU 168 A GLU 168 1 Y 1 A GLY 169 A GLY 169 1 Y 1 A ALA 170 A ALA 170 1 Y 1 A GLU 171 A GLU 171 1 Y 1 A ARG 172 A ARG 172 1 Y 1 A GLY 173 A GLY 173 1 Y 1 A LEU 174 A LEU 174 1 Y 1 A SER 175 A SER 175 1 Y 1 A ALA 176 A ALA 176 1 Y 1 A ILE 177 A ILE 177 1 Y 1 A ARG 178 A ARG 178 1 Y 1 A GLU 179 A GLU 179 1 Y 1 A ARG 180 A ARG 180 1 Y 1 A LEU 181 A LEU 181 1 Y 1 A GLY 182 A GLY 182 1 Y 1 A PRO 183 A PRO 183 1 Y 1 A LEU 184 A LEU 184 1 Y 1 A VAL 185 A VAL 185 1 Y 1 A GLU 186 A GLU 186 1 Y 1 A GLN 187 A GLN 187 1 Y 1 A GLY 188 A GLY 188 1 Y 1 A ARG 189 A ARG 189 1 Y 1 A VAL 190 A VAL 190 1 Y 1 A ARG 191 A ARG 191 1 Y 1 A A NH2 OE2 ARG GLU 61 109 1.66 1 A A O N ALA TYR 160 162 2.12 1 A A GLY GLN 23 24 -135.66 1 A ARG 32 0.185 SIDE CHAIN 1 A ARG 38 0.106 SIDE CHAIN 1 A ARG 61 0.313 SIDE CHAIN 1 A ARG 92 0.134 SIDE CHAIN 1 A ARG 119 0.206 SIDE CHAIN 1 A ARG 134 0.286 SIDE CHAIN 1 A ARG 142 0.087 SIDE CHAIN 1 A ARG 147 0.155 SIDE CHAIN 1 A GLN 24 85.71 122.05 1 A SER 44 -67.94 -178.68 1 A VAL 161 -45.85 0.15 RESIDUES 23 AND 24 ARE NOT WELL DEFINED AND THE BOND ANGLES ARE ON THE BORDERLINE OF THE ALLOWED REGIONS. CONSIDERING THE WEAK ELECTRON DENSITY THERE IS NO POINT IN ATTEMPTING TO ACCURATELY REFINE THESE TWO RESIDUES. 0.2700000 0.2210000 0.2060000 2.0 8.0 5267 1248 12485 4789 10. 94.2 EVERY 10TH REFLECTION 1 R-FREE 0.0 MOLECULAR REPLACEMENT PHASING MODEL DERIVED FROM 1NFN 'SWAT' IN SHELXL93 2.0 8.0 143 1218 0 0 1075 0.010 2.0 0.103 0.06 0.052 0.038 0.047 2.0 15. 1NFO 0.0509000 1 3.5 94.2 model building SHELXL-93 model building X-PLOR refinement SHELXL-93 refinement X-PLOR data collection ADSC phasing SHELXL-93 phasing X-PLOR APOLIPOPROTEIN E2 (APOE2, D154A MUTATION) 1 N N 2 N N A ARG 25 A ARG 25 HELX_P A THR 42 A THR 42 1 1 18 A GLU 45 A GLU 45 HELX_P A LEU 52 A LEU 52 1 2 8 A GLN 55 A GLN 55 HELX_P A GLU 80 A GLU 80 1 3 26 A LEU 93 A LEU 93 HELX_P A MET 125 A MET 125 1 4 33 A GLU 131 A GLU 131 HELX_P A ALA 160 A ALA 160 1 5 30 LIPID TRANSPORT LIPID TRANSPORT, HEPARIN-BINDING, PLASMA PROTEIN, HDL, VLDL APOE_HUMAN UNP 1 1 P02649 MKVLWAALLVTFLAGCQAKVEQAVETEPEPELRQQTEWQSGQRWELALGRFWDYLRWVQTLSEQVQEELLSSQVTQELRA LMDETMKELKAYKSELEEQLTPVAEETRARLSKELQAAQARLGADMEDVCGRLVQYRGEVQAMLGQSTEELRVRLASHLR KLRKRLLRDADDLQKRLAVYQAGAREGAERGLSAIRERLGPLVEQGRVRAATVGSLAGQPLQERAQAWGERLRARMEEMG SRTRDRLDEVKEQVAEVRAKLEEQAQQIRLQAEAFQARLKSWFEPLVEDMQRQWAGLVEKVQAAVGTSAAPVPSDNH 19 209 1NFO 1 191 P02649 A 1 1 191 1 ASP engineered mutation ALA 154 1NFO A P02649 UNP 172 154 1 ARG conflict CYS 158 1NFO A P02649 UNP 176 158 19 P 21 21 21