1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 ASP 79 - ALA 80 OMEGA = 0.14 PEPTIDE BOND DEVIATES SIGNIFICANTLY FROM TRANS CONFORMATION Read, C.M. Cary, P.D. Crane-Robinson, C. Driscoll, P.C. Carillo, M.O.M. Norman, D.G. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking GW NUCLEIC ACIDS MOL.BIOL. NAMBE8 2049 0933-1891 9 222 -1 The Structure of the Hmg Box and its Interaction with DNA 1995 UK Nucleic Acids Res. NARHAD 0389 0305-1048 21 3427 Solution Structure of a DNA-Binding Domain from Hmg1 1993 10.2210/pdb1nhm/pdb pdb_00001nhm 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 8987.280 HIGH MOBILITY GROUP PROTEIN 1 1 man polymer no no GSNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDA A GSNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDA A A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Chinese hamster Cricetulus Escherichia sample INSERT DERIVED BY PCR 10029 Cricetulus griseus 562 Escherichia coli DH5 ALPHA PGEX-2T PGEX-2T GENE: INSERT DERIVED BY PCR database_2 pdbx_database_status pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Database references Derived calculations Other 1 0 1995-02-07 1 1 2008-03-24 1 2 2011-07-13 1 3 2022-02-23 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site Y BNL 1994-11-17 REL 1 NILGES ET AL. refinement SIMULATED ANNEALING, YASAP BRUNGER refinement X-PLOR 3.0 n 1 1 A n 2 2 A ASN 3 n 3 ASN 3 A ALA 4 n 4 ALA 4 A PRO 5 n 5 PRO 5 A LYS 6 n 6 LYS 6 A ARG 7 n 7 ARG 7 A PRO 8 n 8 PRO 8 A PRO 9 n 9 PRO 9 A SER 10 n 10 SER 10 A ALA 11 n 11 ALA 11 A PHE 12 n 12 PHE 12 A PHE 13 n 13 PHE 13 A LEU 14 n 14 LEU 14 A PHE 15 n 15 PHE 15 A CYS 16 n 16 CYS 16 A SER 17 n 17 SER 17 A GLU 18 n 18 GLU 18 A TYR 19 n 19 TYR 19 A ARG 20 n 20 ARG 20 A PRO 21 n 21 PRO 21 A LYS 22 n 22 LYS 22 A ILE 23 n 23 ILE 23 A LYS 24 n 24 LYS 24 A GLY 25 n 25 GLY 25 A GLU 26 n 26 GLU 26 A HIS 27 n 27 HIS 27 A PRO 28 n 28 PRO 28 A GLY 29 n 29 GLY 29 A LEU 30 n 30 LEU 30 A SER 31 n 31 SER 31 A ILE 32 n 32 ILE 32 A GLY 33 n 33 GLY 33 A ASP 34 n 34 ASP 34 A VAL 35 n 35 VAL 35 A ALA 36 n 36 ALA 36 A LYS 37 n 37 LYS 37 A LYS 38 n 38 LYS 38 A LEU 39 n 39 LEU 39 A GLY 40 n 40 GLY 40 A GLU 41 n 41 GLU 41 A MET 42 n 42 MET 42 A TRP 43 n 43 TRP 43 A ASN 44 n 44 ASN 44 A ASN 45 n 45 ASN 45 A THR 46 n 46 THR 46 A ALA 47 n 47 ALA 47 A ALA 48 n 48 ALA 48 A ASP 49 n 49 ASP 49 A ASP 50 n 50 ASP 50 A LYS 51 n 51 LYS 51 A GLN 52 n 52 GLN 52 A PRO 53 n 53 PRO 53 A TYR 54 n 54 TYR 54 A GLU 55 n 55 GLU 55 A LYS 56 n 56 LYS 56 A LYS 57 n 57 LYS 57 A ALA 58 n 58 ALA 58 A ALA 59 n 59 ALA 59 A LYS 60 n 60 LYS 60 A LEU 61 n 61 LEU 61 A LYS 62 n 62 LYS 62 A GLU 63 n 63 GLU 63 A LYS 64 n 64 LYS 64 A TYR 65 n 65 TYR 65 A GLU 66 n 66 GLU 66 A LYS 67 n 67 LYS 67 A ASP 68 n 68 ASP 68 A ILE 69 n 69 ILE 69 A ALA 70 n 70 ALA 70 A ALA 71 n 71 ALA 71 A TYR 72 n 72 TYR 72 A ARG 73 n 73 ARG 73 A ALA 74 n 74 ALA 74 A LYS 75 n 75 LYS 75 A GLY 76 n 76 GLY 76 A LYS 77 n 77 LYS 77 A PRO 78 n 78 PRO 78 A ASP 79 n 79 ASP 79 A ALA 80 n 80 ALA 80 A ALA 81 n 81 ALA 81 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A GLY 1 A GLY 1 1 Y 1 A SER 2 A SER 2 1 Y 1 A ARG 7 0.314 SIDE CHAIN 1 A ARG 20 0.315 SIDE CHAIN 1 A ARG 73 0.312 SIDE CHAIN 1 -6.77 1.00 110.10 103.33 A A A CG CD1 NE1 TRP TRP TRP 43 43 43 N 1 8.04 0.90 109.00 117.04 A A A CD1 NE1 CE2 TRP TRP TRP 43 43 43 N 1 8.08 1.10 130.40 138.48 A A A NE1 CE2 CZ2 TRP TRP TRP 43 43 43 N 1 -6.23 1.00 107.30 101.07 A A A NE1 CE2 CD2 TRP TRP TRP 43 43 43 N 1 A ALA 4 3.31 77.35 1 A PRO 5 -32.31 159.31 1 A ARG 7 2.65 83.91 1 A PRO 8 -53.11 176.63 1 A PRO 9 -36.02 150.42 1 A ALA 11 106.94 -68.11 1 A HIS 27 -113.86 62.59 1 A PRO 28 -79.33 36.48 1 A GLU 41 -90.02 -60.64 1 A THR 46 -97.66 -150.07 1 A ALA 48 32.18 25.25 1 A GLN 52 -27.31 -56.59 1 A GLU 66 -39.43 -27.44 1 A ALA 74 -98.85 37.94 1 A ASP 79 85.44 61.55 1 A ALA 80 152.27 58.65 model building X-PLOR 3.0 refinement X-PLOR 3.0 phasing X-PLOR 3.0 THE STRUCTURE OF THE HMG BOX AND ITS INTERACTION WITH DNA 1 Y N A PHE 12 A PHE 12 HELX_P A GLU 18 A GLU 18 1 H1 7 A PRO 21 A PRO 21 HELX_P H1 AND H1' BEND AROUND H2 A GLU 26 A GLU 26 1 H1' 6 A GLY 33 A GLY 33 HELX_P A ASN 44 A ASN 44 1 H2 12 A PRO 53 A PRO 53 HELX_P A ARG 73 A ARG 73 1 H3 21 DNA-BINDING DNA-BINDING A ASP 79 A ASP 79 1 A ALA 80 A ALA 80 0.14 HMG1_CRIGR UNP 1 1 P07156 VNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKG EHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEEDEE DEEEEEEEEDEDEEEDDDDE 58 136 1NHM 3 81 P07156 A 1 3 81 1 P 1