0.009482
0.000000
0.000000
0.000000
0.004683
0.000000
0.000000
0.000000
0.019109
0.00000
0.00000
0.00000
Khayat, R.
Batra, R.
Qian, C.
Halmos, T.
Bailey, M.
Tong, L.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.00
90.00
90.00
105.460
213.530
52.330
C37 H63 N7 O7
717.939
N-(6-aminohexanoyl)-3-methyl-L-valyl-3-methyl-L-valyl-N~1~-[(2S,3S)-3-hydroxy-4-oxo-4-{[(1R)-1-phenylpropyl]amino}butan-2-yl]-N~4~,N~4~-dimethyl-L-aspartamide
BILC 408
peptide-like
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
C
N
2
N
C
N
3
N
O
N
4
N
C
N
5
N
C
N
6
N
C
N
7
N
C
N
8
N
N
N
9
N
N
N
10
S
C
N
11
N
C
N
12
N
C
N
13
N
C
N
14
N
C
N
15
N
C
N
16
N
O
N
17
N
N
N
18
S
C
N
19
N
C
N
20
N
C
N
21
N
C
N
22
N
C
N
23
N
C
N
24
N
O
N
25
N
N
N
26
S
C
N
27
N
C
N
28
N
C
N
29
N
O
N
30
N
N
N
31
N
C
N
32
N
C
N
33
N
C
N
34
N
O
N
35
N
N
N
36
S
C
N
37
S
C
N
38
N
O
N
39
N
C
N
40
N
C
N
41
N
O
N
42
N
N
N
43
R
C
N
44
N
C
N
45
N
C
Y
46
N
C
Y
47
N
C
Y
48
N
C
Y
49
N
C
Y
50
N
C
Y
51
N
C
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
N
N
116
S
C
N
117
N
C
N
118
N
O
N
119
N
C
N
120
N
O
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
N
N
129
S
C
N
130
N
C
N
131
N
O
N
132
N
C
N
133
N
C
N
134
N
C
N
135
N
N
N
136
N
C
N
137
N
N
N
138
N
N
N
139
N
O
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
N
N
156
S
C
N
157
N
C
N
158
N
O
N
159
N
C
N
160
N
C
N
161
N
O
N
162
N
N
N
163
N
O
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
N
N
173
S
C
N
174
N
C
N
175
N
O
N
176
N
C
N
177
N
C
N
178
N
O
N
179
N
O
N
180
N
O
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
N
N
189
R
C
N
190
N
C
N
191
N
O
N
192
N
C
N
193
N
S
N
194
N
O
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
N
N
203
S
C
N
204
N
C
N
205
N
O
N
206
N
C
N
207
N
C
N
208
N
C
N
209
N
O
N
210
N
N
N
211
N
O
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
N
N
223
S
C
N
224
N
C
N
225
N
O
N
226
N
C
N
227
N
C
N
228
N
C
N
229
N
O
N
230
N
O
N
231
N
O
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
N
N
242
N
C
N
243
N
C
N
244
N
O
N
245
N
O
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
Y
256
N
C
Y
257
N
N
Y
258
N
C
Y
259
N
C
Y
260
N
N
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
N
N
273
S
C
N
274
N
C
N
275
N
O
N
276
S
C
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
N
N
295
S
C
N
296
N
C
N
297
N
O
N
298
N
C
N
299
N
C
N
300
N
C
N
301
N
C
N
302
N
O
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
N
N
317
S
C
N
318
N
C
N
319
N
O
N
320
N
C
N
321
N
C
N
322
N
C
N
323
N
C
N
324
N
N
N
325
N
O
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
N
N
342
S
C
N
343
N
C
N
344
N
O
N
345
N
C
N
346
N
C
N
347
N
S
N
348
N
C
N
349
N
O
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
N
N
362
S
C
N
363
N
C
N
364
N
O
N
365
N
C
Y
366
N
C
Y
367
N
C
Y
368
N
C
Y
369
N
C
Y
370
N
C
Y
371
N
C
N
372
N
O
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
N
N
385
S
C
N
386
N
C
N
387
N
O
N
388
N
C
N
389
N
C
N
390
N
C
N
391
N
O
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
N
N
402
S
C
N
403
N
C
N
404
N
O
N
405
N
C
N
406
N
O
N
407
N
O
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
N
N
416
S
C
N
417
N
C
N
418
N
O
N
419
R
C
N
420
N
O
N
421
N
C
N
422
N
O
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
N
N
433
S
C
N
434
N
C
N
435
N
O
N
436
N
C
Y
437
N
C
Y
438
N
C
Y
439
N
C
Y
440
N
N
Y
441
N
C
Y
442
N
C
Y
443
N
C
Y
444
N
C
Y
445
N
C
N
446
N
O
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
N
N
460
S
C
N
461
N
C
N
462
N
O
N
463
N
C
Y
464
N
C
Y
465
N
C
Y
466
N
C
Y
467
N
C
Y
468
N
C
Y
469
N
C
N
470
N
O
N
471
N
O
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
N
N
484
S
C
N
485
N
C
N
486
N
O
N
487
N
C
N
488
N
C
N
489
N
C
N
490
N
O
N
491
N
H
N
492
N
H
N
493
N
H
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
H
N
498
N
H
N
499
N
H
N
500
N
H
N
501
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
doub
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
doub
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
doub
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
doub
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
doub
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
Y
102
N
doub
Y
103
N
sing
Y
104
N
sing
N
105
N
sing
Y
106
N
doub
N
107
N
sing
Y
108
N
sing
N
109
N
sing
Y
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
doub
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
doub
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
doub
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
doub
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
doub
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
doub
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
doub
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
doub
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
doub
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
doub
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
doub
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
Y
254
N
sing
Y
255
N
doub
Y
256
N
doub
N
257
N
sing
Y
258
N
sing
N
259
N
sing
Y
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
doub
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
doub
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
doub
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
Y
360
N
doub
Y
361
N
sing
Y
362
N
sing
N
363
N
sing
Y
364
N
doub
N
365
N
sing
Y
366
N
doub
N
367
N
sing
Y
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
doub
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
doub
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
doub
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
doub
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
Y
429
N
doub
Y
430
N
sing
Y
431
N
sing
N
432
N
sing
Y
433
N
doub
Y
434
N
sing
Y
435
N
sing
N
436
N
sing
Y
437
N
sing
Y
438
N
doub
N
439
N
sing
Y
440
N
doub
N
441
N
sing
Y
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
doub
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
Y
457
N
doub
Y
458
N
sing
Y
459
N
sing
N
460
N
sing
Y
461
N
doub
N
462
N
sing
Y
463
N
doub
N
464
N
sing
Y
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
doub
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
42
885
891
10.1021/bi027045s
12549906
Structural and Biochemical Studies of Inhibitor Binding to Human Cytomegalovirus Protease
2003
10.2210/pdb1nju/pdb
pdb_00001nju
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2001-07-06
ADSC QUANTUM 4
Si (111)
SINGLE WAVELENGTH
M
x-ray
1
1.00000
1.0
X4A
NSLS
1.00000
SYNCHROTRON
NSLS BEAMLINE X4A
28130.547
Assemblin
3.4.21.97
A143Q
4
man
polymer
Residue peptide of the Peptidomimetic Inhibitor was chemically synthesized.
717.939
N-(6-aminohexanoyl)-3-methyl-L-valyl-3-methyl-L-valyl-N~1~-[(2S,3S)-3-hydroxy-4-oxo-4-{[(1R)-1-phenylpropyl]amino}butan-2-yl]-N~4~,N~4~-dimethyl-L-aspartamide
4
syn
non-polymer
Protease, Capsid assembly protein
no
no
MTMDEQQSQAVAPVYVGGFLARYDQSPDEAELLLPRDVVEHWLHAQGQGQPSLSVALPLNINHDDTAVVGHVAAMQSVRD
GLFCLGCVTSPRFLEIVRRASEKSELVSRGPVSPLQPDKVVEFLSGSYAGLSLSSRRCDDVEQATSLSGSETTPFKHVAL
CSVGRRRGTLAVYGRDPEWVTQRFPDLTAADRDGLRAQWQRCGSTAVDASGDPFRSDSYGLLGNSVDALYIRERLPKLRY
DKQLVGVTERESYVKA
MTMDEQQSQAVAPVYVGGFLARYDQSPDEAELLLPRDVVEHWLHAQGQGQPSLSVALPLNINHDDTAVVGHVAAMQSVRD
GLFCLGCVTSPRFLEIVRRASEKSELVSRGPVSPLQPDKVVEFLSGSYAGLSLSSRRCDDVEQATSLSGSETTPFKHVAL
CSVGRRRGTLAVYGRDPEWVTQRFPDLTAADRDGLRAQWQRCGSTAVDASGDPFRSDSYGLLGNSVDALYIRERLPKLRY
DKQLVGVTERESYVKA
A,B,C,D
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human cytomegalovirus
sample
UL80, APNG
10359
Human herpesvirus 5
562
Escherichia coli
1
2.57
52.07
VAPOR DIFFUSION, HANGING DROP
7.0
PEG 4000, HEPES, EDTA, Sodium Chloride, Sodium Sulfate, DTT, Spermine_HCl, Glycerol, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
database_2
struct_conn
struct_ref_seq_dif
struct_sheet
struct_site
chem_comp_atom
chem_comp_bond
entity
pdbx_entity_src_syn
repository
Initial release
Version format compliance
Atomic model
Database references
Derived calculations
Non-polymer description
Source and taxonomy
Structure summary
Version format compliance
Other
Database references
Derived calculations
Data collection
Source and taxonomy
Structure summary
1
0
2003-02-11
1
1
2008-04-29
1
2
2011-07-13
1
3
2012-12-12
1
4
2021-10-27
1
5
2024-03-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_ref_seq_dif.details
_struct_sheet.number_strands
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_entity.details
RCSB
Y
RCSB
2003-01-02
REL
0FP
N-(6-aminohexanoyl)-3-methyl-L-valyl-3-methyl-L-valyl-N~1~-[(2S,3S)-3-hydroxy-4-oxo-4-{[(1R)-1-phenylpropyl]amino}butan-2-yl]-N~4~,N~4~-dimethyl-L-aspartamide
THE INHIBITOR 0FP IS COVALENTLY CONNECTED AT CARBON C4
TO THE ACTIVE SITE SERINES (A 132, B 432, C 1132, D 1432) VIA
HEMIKETAL LINKAGES
Inhibitor
N-(6-aminohexanoyl)-3-methyl-L-valyl-3-methyl-L-valyl-N~4~,N~4~-dimethyl-N~1~-[(1R)-1-methyl-2,3-dioxo-3-{[(1S)-1-
phenylpropyl]amino}propyl]-L-aspartamide
Peptide-like
DAL
260
2
0FP
0FP
260
A
DAL
560
2
0FP
0FP
560
B
DAL
1260
2
0FP
0FP
1260
C
DAL
1560
2
0FP
0FP
1560
D
n
1
1
A
n
2
2
A
n
3
3
A
ASP
4
n
4
ASP
4
A
GLU
5
n
5
GLU
5
A
GLN
6
n
6
GLN
6
A
GLN
7
n
7
GLN
7
A
SER
8
n
8
SER
8
A
GLN
9
n
9
GLN
9
A
ALA
10
n
10
ALA
10
A
VAL
11
n
11
VAL
11
A
ALA
12
n
12
ALA
12
A
PRO
13
n
13
PRO
13
A
VAL
14
n
14
VAL
14
A
TYR
15
n
15
TYR
15
A
VAL
16
n
16
VAL
16
A
GLY
17
n
17
GLY
17
A
GLY
18
n
18
GLY
18
A
PHE
19
n
19
PHE
19
A
LEU
20
n
20
LEU
20
A
ALA
21
n
21
ALA
21
A
ARG
22
n
22
ARG
22
A
TYR
23
n
23
TYR
23
A
ASP
24
n
24
ASP
24
A
GLN
25
n
25
GLN
25
A
SER
26
n
26
SER
26
A
PRO
27
n
27
PRO
27
A
ASP
28
n
28
ASP
28
A
GLU
29
n
29
GLU
29
A
ALA
30
n
30
ALA
30
A
GLU
31
n
31
GLU
31
A
LEU
32
n
32
LEU
32
A
LEU
33
n
33
LEU
33
A
LEU
34
n
34
LEU
34
A
PRO
35
n
35
PRO
35
A
ARG
36
n
36
ARG
36
A
ASP
37
n
37
ASP
37
A
VAL
38
n
38
VAL
38
A
VAL
39
n
39
VAL
39
A
GLU
40
n
40
GLU
40
A
HIS
41
n
41
HIS
41
A
TRP
42
n
42
TRP
42
A
LEU
43
n
43
LEU
43
A
HIS
44
n
44
HIS
44
A
ALA
45
n
45
ALA
45
A
GLN
46
n
46
GLN
46
A
n
47
47
A
n
48
48
A
n
49
49
A
n
50
50
A
n
51
51
A
n
52
52
A
LEU
53
n
53
LEU
53
A
SER
54
n
54
SER
54
A
VAL
55
n
55
VAL
55
A
ALA
56
n
56
ALA
56
A
LEU
57
n
57
LEU
57
A
PRO
58
n
58
PRO
58
A
LEU
59
n
59
LEU
59
A
ASN
60
n
60
ASN
60
A
ILE
61
n
61
ILE
61
A
ASN
62
n
62
ASN
62
A
HIS
63
n
63
HIS
63
A
ASP
64
n
64
ASP
64
A
ASP
65
n
65
ASP
65
A
THR
66
n
66
THR
66
A
ALA
67
n
67
ALA
67
A
VAL
68
n
68
VAL
68
A
VAL
69
n
69
VAL
69
A
GLY
70
n
70
GLY
70
A
HIS
71
n
71
HIS
71
A
VAL
72
n
72
VAL
72
A
ALA
73
n
73
ALA
73
A
ALA
74
n
74
ALA
74
A
MET
75
n
75
MET
75
A
GLN
76
n
76
GLN
76
A
SER
77
n
77
SER
77
A
VAL
78
n
78
VAL
78
A
ARG
79
n
79
ARG
79
A
ASP
80
n
80
ASP
80
A
GLY
81
n
81
GLY
81
A
LEU
82
n
82
LEU
82
A
PHE
83
n
83
PHE
83
A
CYS
84
n
84
CYS
84
A
LEU
85
n
85
LEU
85
A
GLY
86
n
86
GLY
86
A
CYS
87
n
87
CYS
87
A
VAL
88
n
88
VAL
88
A
THR
89
n
89
THR
89
A
SER
90
n
90
SER
90
A
PRO
91
n
91
PRO
91
A
ARG
92
n
92
ARG
92
A
PHE
93
n
93
PHE
93
A
LEU
94
n
94
LEU
94
A
GLU
95
n
95
GLU
95
A
ILE
96
n
96
ILE
96
A
VAL
97
n
97
VAL
97
A
ARG
98
n
98
ARG
98
A
ARG
99
n
99
ARG
99
A
ALA
100
n
100
ALA
100
A
SER
101
n
101
SER
101
A
GLU
102
n
102
GLU
102
A
LYS
103
n
103
LYS
103
A
SER
104
n
104
SER
104
A
GLU
105
n
105
GLU
105
A
LEU
106
n
106
LEU
106
A
VAL
107
n
107
VAL
107
A
SER
108
n
108
SER
108
A
ARG
109
n
109
ARG
109
A
GLY
110
n
110
GLY
110
A
PRO
111
n
111
PRO
111
A
VAL
112
n
112
VAL
112
A
SER
113
n
113
SER
113
A
PRO
114
n
114
PRO
114
A
LEU
115
n
115
LEU
115
A
GLN
116
n
116
GLN
116
A
PRO
117
n
117
PRO
117
A
ASP
118
n
118
ASP
118
A
LYS
119
n
119
LYS
119
A
VAL
120
n
120
VAL
120
A
VAL
121
n
121
VAL
121
A
GLU
122
n
122
GLU
122
A
PHE
123
n
123
PHE
123
A
LEU
124
n
124
LEU
124
A
SER
125
n
125
SER
125
A
GLY
126
n
126
GLY
126
A
SER
127
n
127
SER
127
A
TYR
128
n
128
TYR
128
A
ALA
129
n
129
ALA
129
A
GLY
130
n
130
GLY
130
A
LEU
131
n
131
LEU
131
A
SER
132
n
132
SER
132
A
LEU
133
n
133
LEU
133
A
SER
134
n
134
SER
134
A
SER
135
n
135
SER
135
A
ARG
136
n
136
ARG
136
A
ARG
137
n
137
ARG
137
A
CYS
138
n
138
CYS
138
A
ASP
139
n
139
ASP
139
A
ASP
140
n
140
ASP
140
A
VAL
141
n
141
VAL
141
A
GLU
142
n
142
GLU
142
A
GLN
143
n
143
GLN
143
A
n
144
144
A
n
145
145
A
n
146
146
A
n
147
147
A
n
148
148
A
n
149
149
A
n
150
150
A
n
151
151
A
THR
152
n
152
THR
152
A
THR
153
n
153
THR
153
A
PRO
154
n
154
PRO
154
A
PHE
155
n
155
PHE
155
A
LYS
156
n
156
LYS
156
A
HIS
157
n
157
HIS
157
A
VAL
158
n
158
VAL
158
A
ALA
159
n
159
ALA
159
A
LEU
160
n
160
LEU
160
A
CYS
161
n
161
CYS
161
A
SER
162
n
162
SER
162
A
VAL
163
n
163
VAL
163
A
GLY
164
n
164
GLY
164
A
ARG
165
n
165
ARG
165
A
ARG
166
n
166
ARG
166
A
ARG
167
n
167
ARG
167
A
GLY
168
n
168
GLY
168
A
THR
169
n
169
THR
169
A
LEU
170
n
170
LEU
170
A
ALA
171
n
171
ALA
171
A
VAL
172
n
172
VAL
172
A
TYR
173
n
173
TYR
173
A
GLY
174
n
174
GLY
174
A
ARG
175
n
175
ARG
175
A
ASP
176
n
176
ASP
176
A
PRO
177
n
177
PRO
177
A
GLU
178
n
178
GLU
178
A
TRP
179
n
179
TRP
179
A
VAL
180
n
180
VAL
180
A
THR
181
n
181
THR
181
A
GLN
182
n
182
GLN
182
A
ARG
183
n
183
ARG
183
A
PHE
184
n
184
PHE
184
A
PRO
185
n
185
PRO
185
A
ASP
186
n
186
ASP
186
A
LEU
187
n
187
LEU
187
A
THR
188
n
188
THR
188
A
ALA
189
n
189
ALA
189
A
ALA
190
n
190
ALA
190
A
ASP
191
n
191
ASP
191
A
ARG
192
n
192
ARG
192
A
ASP
193
n
193
ASP
193
A
GLY
194
n
194
GLY
194
A
LEU
195
n
195
LEU
195
A
ARG
196
n
196
ARG
196
A
ALA
197
n
197
ALA
197
A
GLN
198
n
198
GLN
198
A
TRP
199
n
199
TRP
199
A
GLN
200
n
200
GLN
200
A
n
201
201
A
n
202
202
A
n
203
203
A
n
204
204
A
n
205
205
A
n
206
206
A
n
207
207
A
n
208
208
A
n
209
209
A
SER
210
n
210
SER
210
A
GLY
211
n
211
GLY
211
A
ASP
212
n
212
ASP
212
A
PRO
213
n
213
PRO
213
A
PHE
214
n
214
PHE
214
A
ARG
215
n
215
ARG
215
A
SER
216
n
216
SER
216
A
ASP
217
n
217
ASP
217
A
SER
218
n
218
SER
218
A
TYR
219
n
219
TYR
219
A
GLY
220
n
220
GLY
220
A
LEU
221
n
221
LEU
221
A
LEU
222
n
222
LEU
222
A
GLY
223
n
223
GLY
223
A
ASN
224
n
224
ASN
224
A
SER
225
n
225
SER
225
A
VAL
226
n
226
VAL
226
A
ASP
227
n
227
ASP
227
A
ALA
228
n
228
ALA
228
A
LEU
229
n
229
LEU
229
A
TYR
230
n
230
TYR
230
A
ILE
231
n
231
ILE
231
A
ARG
232
n
232
ARG
232
A
GLU
233
n
233
GLU
233
A
ARG
234
n
234
ARG
234
A
LEU
235
n
235
LEU
235
A
PRO
236
n
236
PRO
236
A
LYS
237
n
237
LYS
237
A
LEU
238
n
238
LEU
238
A
ARG
239
n
239
ARG
239
A
TYR
240
n
240
TYR
240
A
ASP
241
n
241
ASP
241
A
LYS
242
n
242
LYS
242
A
GLN
243
n
243
GLN
243
A
LEU
244
n
244
LEU
244
A
VAL
245
n
245
VAL
245
A
GLY
246
n
246
GLY
246
A
VAL
247
n
247
VAL
247
A
THR
248
n
248
THR
248
A
GLU
249
n
249
GLU
249
A
ARG
250
n
250
ARG
250
A
GLU
251
n
251
GLU
251
A
SER
252
n
252
SER
252
A
TYR
253
n
253
TYR
253
A
VAL
254
n
254
VAL
254
A
LYS
255
n
255
LYS
255
A
ALA
256
n
256
ALA
256
A
n
1
301
B
n
2
302
B
n
3
303
B
ASP
304
n
4
ASP
304
B
GLU
305
n
5
GLU
305
B
GLN
306
n
6
GLN
306
B
GLN
307
n
7
GLN
307
B
SER
308
n
8
SER
308
B
GLN
309
n
9
GLN
309
B
ALA
310
n
10
ALA
310
B
VAL
311
n
11
VAL
311
B
ALA
312
n
12
ALA
312
B
PRO
313
n
13
PRO
313
B
VAL
314
n
14
VAL
314
B
TYR
315
n
15
TYR
315
B
VAL
316
n
16
VAL
316
B
GLY
317
n
17
GLY
317
B
GLY
318
n
18
GLY
318
B
PHE
319
n
19
PHE
319
B
LEU
320
n
20
LEU
320
B
ALA
321
n
21
ALA
321
B
ARG
322
n
22
ARG
322
B
TYR
323
n
23
TYR
323
B
ASP
324
n
24
ASP
324
B
GLN
325
n
25
GLN
325
B
SER
326
n
26
SER
326
B
PRO
327
n
27
PRO
327
B
ASP
328
n
28
ASP
328
B
GLU
329
n
29
GLU
329
B
ALA
330
n
30
ALA
330
B
GLU
331
n
31
GLU
331
B
LEU
332
n
32
LEU
332
B
LEU
333
n
33
LEU
333
B
LEU
334
n
34
LEU
334
B
PRO
335
n
35
PRO
335
B
ARG
336
n
36
ARG
336
B
ASP
337
n
37
ASP
337
B
VAL
338
n
38
VAL
338
B
VAL
339
n
39
VAL
339
B
GLU
340
n
40
GLU
340
B
HIS
341
n
41
HIS
341
B
TRP
342
n
42
TRP
342
B
LEU
343
n
43
LEU
343
B
HIS
344
n
44
HIS
344
B
ALA
345
n
45
ALA
345
B
GLN
346
n
46
GLN
346
B
n
47
347
B
n
48
348
B
n
49
349
B
n
50
350
B
n
51
351
B
n
52
352
B
n
53
353
B
SER
354
n
54
SER
354
B
VAL
355
n
55
VAL
355
B
ALA
356
n
56
ALA
356
B
LEU
357
n
57
LEU
357
B
PRO
358
n
58
PRO
358
B
LEU
359
n
59
LEU
359
B
ASN
360
n
60
ASN
360
B
ILE
361
n
61
ILE
361
B
ASN
362
n
62
ASN
362
B
HIS
363
n
63
HIS
363
B
ASP
364
n
64
ASP
364
B
ASP
365
n
65
ASP
365
B
THR
366
n
66
THR
366
B
ALA
367
n
67
ALA
367
B
VAL
368
n
68
VAL
368
B
VAL
369
n
69
VAL
369
B
GLY
370
n
70
GLY
370
B
HIS
371
n
71
HIS
371
B
VAL
372
n
72
VAL
372
B
ALA
373
n
73
ALA
373
B
ALA
374
n
74
ALA
374
B
MET
375
n
75
MET
375
B
GLN
376
n
76
GLN
376
B
SER
377
n
77
SER
377
B
VAL
378
n
78
VAL
378
B
ARG
379
n
79
ARG
379
B
ASP
380
n
80
ASP
380
B
GLY
381
n
81
GLY
381
B
LEU
382
n
82
LEU
382
B
PHE
383
n
83
PHE
383
B
CYS
384
n
84
CYS
384
B
LEU
385
n
85
LEU
385
B
GLY
386
n
86
GLY
386
B
CYS
387
n
87
CYS
387
B
VAL
388
n
88
VAL
388
B
THR
389
n
89
THR
389
B
SER
390
n
90
SER
390
B
PRO
391
n
91
PRO
391
B
ARG
392
n
92
ARG
392
B
PHE
393
n
93
PHE
393
B
LEU
394
n
94
LEU
394
B
GLU
395
n
95
GLU
395
B
ILE
396
n
96
ILE
396
B
VAL
397
n
97
VAL
397
B
ARG
398
n
98
ARG
398
B
ARG
399
n
99
ARG
399
B
ALA
400
n
100
ALA
400
B
SER
401
n
101
SER
401
B
GLU
402
n
102
GLU
402
B
LYS
403
n
103
LYS
403
B
SER
404
n
104
SER
404
B
GLU
405
n
105
GLU
405
B
LEU
406
n
106
LEU
406
B
VAL
407
n
107
VAL
407
B
SER
408
n
108
SER
408
B
ARG
409
n
109
ARG
409
B
GLY
410
n
110
GLY
410
B
PRO
411
n
111
PRO
411
B
VAL
412
n
112
VAL
412
B
SER
413
n
113
SER
413
B
PRO
414
n
114
PRO
414
B
LEU
415
n
115
LEU
415
B
GLN
416
n
116
GLN
416
B
PRO
417
n
117
PRO
417
B
ASP
418
n
118
ASP
418
B
LYS
419
n
119
LYS
419
B
VAL
420
n
120
VAL
420
B
VAL
421
n
121
VAL
421
B
GLU
422
n
122
GLU
422
B
PHE
423
n
123
PHE
423
B
LEU
424
n
124
LEU
424
B
SER
425
n
125
SER
425
B
GLY
426
n
126
GLY
426
B
SER
427
n
127
SER
427
B
TYR
428
n
128
TYR
428
B
ALA
429
n
129
ALA
429
B
GLY
430
n
130
GLY
430
B
LEU
431
n
131
LEU
431
B
SER
432
n
132
SER
432
B
LEU
433
n
133
LEU
433
B
SER
434
n
134
SER
434
B
SER
435
n
135
SER
435
B
ARG
436
n
136
ARG
436
B
ARG
437
n
137
ARG
437
B
CYS
438
n
138
CYS
438
B
ASP
439
n
139
ASP
439
B
ASP
440
n
140
ASP
440
B
VAL
441
n
141
VAL
441
B
GLU
442
n
142
GLU
442
B
GLN
443
n
143
GLN
443
B
n
144
444
B
n
145
445
B
n
146
446
B
n
147
447
B
n
148
448
B
n
149
449
B
n
150
450
B
n
151
451
B
THR
452
n
152
THR
452
B
THR
453
n
153
THR
453
B
PRO
454
n
154
PRO
454
B
PHE
455
n
155
PHE
455
B
LYS
456
n
156
LYS
456
B
HIS
457
n
157
HIS
457
B
VAL
458
n
158
VAL
458
B
ALA
459
n
159
ALA
459
B
LEU
460
n
160
LEU
460
B
CYS
461
n
161
CYS
461
B
SER
462
n
162
SER
462
B
VAL
463
n
163
VAL
463
B
GLY
464
n
164
GLY
464
B
ARG
465
n
165
ARG
465
B
ARG
466
n
166
ARG
466
B
ARG
467
n
167
ARG
467
B
GLY
468
n
168
GLY
468
B
THR
469
n
169
THR
469
B
LEU
470
n
170
LEU
470
B
ALA
471
n
171
ALA
471
B
VAL
472
n
172
VAL
472
B
TYR
473
n
173
TYR
473
B
GLY
474
n
174
GLY
474
B
ARG
475
n
175
ARG
475
B
ASP
476
n
176
ASP
476
B
PRO
477
n
177
PRO
477
B
GLU
478
n
178
GLU
478
B
TRP
479
n
179
TRP
479
B
VAL
480
n
180
VAL
480
B
THR
481
n
181
THR
481
B
GLN
482
n
182
GLN
482
B
ARG
483
n
183
ARG
483
B
PHE
484
n
184
PHE
484
B
PRO
485
n
185
PRO
485
B
ASP
486
n
186
ASP
486
B
LEU
487
n
187
LEU
487
B
THR
488
n
188
THR
488
B
ALA
489
n
189
ALA
489
B
ALA
490
n
190
ALA
490
B
ASP
491
n
191
ASP
491
B
ARG
492
n
192
ARG
492
B
ASP
493
n
193
ASP
493
B
GLY
494
n
194
GLY
494
B
LEU
495
n
195
LEU
495
B
ARG
496
n
196
ARG
496
B
ALA
497
n
197
ALA
497
B
GLN
498
n
198
GLN
498
B
TRP
499
n
199
TRP
499
B
GLN
500
n
200
GLN
500
B
n
201
501
B
n
202
502
B
n
203
503
B
n
204
504
B
n
205
505
B
n
206
506
B
n
207
507
B
n
208
508
B
ALA
509
n
209
ALA
509
B
SER
510
n
210
SER
510
B
GLY
511
n
211
GLY
511
B
ASP
512
n
212
ASP
512
B
PRO
513
n
213
PRO
513
B
PHE
514
n
214
PHE
514
B
ARG
515
n
215
ARG
515
B
SER
516
n
216
SER
516
B
ASP
517
n
217
ASP
517
B
SER
518
n
218
SER
518
B
TYR
519
n
219
TYR
519
B
GLY
520
n
220
GLY
520
B
LEU
521
n
221
LEU
521
B
LEU
522
n
222
LEU
522
B
GLY
523
n
223
GLY
523
B
ASN
524
n
224
ASN
524
B
SER
525
n
225
SER
525
B
VAL
526
n
226
VAL
526
B
ASP
527
n
227
ASP
527
B
ALA
528
n
228
ALA
528
B
LEU
529
n
229
LEU
529
B
TYR
530
n
230
TYR
530
B
ILE
531
n
231
ILE
531
B
ARG
532
n
232
ARG
532
B
GLU
533
n
233
GLU
533
B
ARG
534
n
234
ARG
534
B
LEU
535
n
235
LEU
535
B
PRO
536
n
236
PRO
536
B
LYS
537
n
237
LYS
537
B
LEU
538
n
238
LEU
538
B
ARG
539
n
239
ARG
539
B
TYR
540
n
240
TYR
540
B
ASP
541
n
241
ASP
541
B
LYS
542
n
242
LYS
542
B
GLN
543
n
243
GLN
543
B
LEU
544
n
244
LEU
544
B
VAL
545
n
245
VAL
545
B
GLY
546
n
246
GLY
546
B
VAL
547
n
247
VAL
547
B
THR
548
n
248
THR
548
B
GLU
549
n
249
GLU
549
B
ARG
550
n
250
ARG
550
B
GLU
551
n
251
GLU
551
B
SER
552
n
252
SER
552
B
TYR
553
n
253
TYR
553
B
VAL
554
n
254
VAL
554
B
LYS
555
n
255
LYS
555
B
ALA
556
n
256
ALA
556
B
n
1
1001
C
n
2
1002
C
n
3
1003
C
ASP
1004
n
4
ASP
1004
C
GLU
1005
n
5
GLU
1005
C
GLN
1006
n
6
GLN
1006
C
GLN
1007
n
7
GLN
1007
C
SER
1008
n
8
SER
1008
C
GLN
1009
n
9
GLN
1009
C
ALA
1010
n
10
ALA
1010
C
VAL
1011
n
11
VAL
1011
C
ALA
1012
n
12
ALA
1012
C
PRO
1013
n
13
PRO
1013
C
VAL
1014
n
14
VAL
1014
C
TYR
1015
n
15
TYR
1015
C
VAL
1016
n
16
VAL
1016
C
GLY
1017
n
17
GLY
1017
C
GLY
1018
n
18
GLY
1018
C
PHE
1019
n
19
PHE
1019
C
LEU
1020
n
20
LEU
1020
C
ALA
1021
n
21
ALA
1021
C
ARG
1022
n
22
ARG
1022
C
TYR
1023
n
23
TYR
1023
C
ASP
1024
n
24
ASP
1024
C
GLN
1025
n
25
GLN
1025
C
SER
1026
n
26
SER
1026
C
PRO
1027
n
27
PRO
1027
C
ASP
1028
n
28
ASP
1028
C
GLU
1029
n
29
GLU
1029
C
ALA
1030
n
30
ALA
1030
C
GLU
1031
n
31
GLU
1031
C
LEU
1032
n
32
LEU
1032
C
LEU
1033
n
33
LEU
1033
C
LEU
1034
n
34
LEU
1034
C
PRO
1035
n
35
PRO
1035
C
ARG
1036
n
36
ARG
1036
C
ASP
1037
n
37
ASP
1037
C
VAL
1038
n
38
VAL
1038
C
VAL
1039
n
39
VAL
1039
C
GLU
1040
n
40
GLU
1040
C
HIS
1041
n
41
HIS
1041
C
TRP
1042
n
42
TRP
1042
C
LEU
1043
n
43
LEU
1043
C
HIS
1044
n
44
HIS
1044
C
ALA
1045
n
45
ALA
1045
C
GLN
1046
n
46
GLN
1046
C
n
47
1047
C
n
48
1048
C
n
49
1049
C
n
50
1050
C
n
51
1051
C
n
52
1052
C
LEU
1053
n
53
LEU
1053
C
SER
1054
n
54
SER
1054
C
VAL
1055
n
55
VAL
1055
C
ALA
1056
n
56
ALA
1056
C
LEU
1057
n
57
LEU
1057
C
PRO
1058
n
58
PRO
1058
C
LEU
1059
n
59
LEU
1059
C
ASN
1060
n
60
ASN
1060
C
ILE
1061
n
61
ILE
1061
C
ASN
1062
n
62
ASN
1062
C
HIS
1063
n
63
HIS
1063
C
ASP
1064
n
64
ASP
1064
C
ASP
1065
n
65
ASP
1065
C
THR
1066
n
66
THR
1066
C
ALA
1067
n
67
ALA
1067
C
VAL
1068
n
68
VAL
1068
C
VAL
1069
n
69
VAL
1069
C
GLY
1070
n
70
GLY
1070
C
HIS
1071
n
71
HIS
1071
C
VAL
1072
n
72
VAL
1072
C
ALA
1073
n
73
ALA
1073
C
ALA
1074
n
74
ALA
1074
C
MET
1075
n
75
MET
1075
C
GLN
1076
n
76
GLN
1076
C
SER
1077
n
77
SER
1077
C
VAL
1078
n
78
VAL
1078
C
ARG
1079
n
79
ARG
1079
C
ASP
1080
n
80
ASP
1080
C
GLY
1081
n
81
GLY
1081
C
LEU
1082
n
82
LEU
1082
C
PHE
1083
n
83
PHE
1083
C
CYS
1084
n
84
CYS
1084
C
LEU
1085
n
85
LEU
1085
C
GLY
1086
n
86
GLY
1086
C
CYS
1087
n
87
CYS
1087
C
VAL
1088
n
88
VAL
1088
C
THR
1089
n
89
THR
1089
C
SER
1090
n
90
SER
1090
C
PRO
1091
n
91
PRO
1091
C
ARG
1092
n
92
ARG
1092
C
PHE
1093
n
93
PHE
1093
C
LEU
1094
n
94
LEU
1094
C
GLU
1095
n
95
GLU
1095
C
ILE
1096
n
96
ILE
1096
C
VAL
1097
n
97
VAL
1097
C
ARG
1098
n
98
ARG
1098
C
ARG
1099
n
99
ARG
1099
C
ALA
1100
n
100
ALA
1100
C
SER
1101
n
101
SER
1101
C
GLU
1102
n
102
GLU
1102
C
LYS
1103
n
103
LYS
1103
C
SER
1104
n
104
SER
1104
C
GLU
1105
n
105
GLU
1105
C
LEU
1106
n
106
LEU
1106
C
VAL
1107
n
107
VAL
1107
C
SER
1108
n
108
SER
1108
C
ARG
1109
n
109
ARG
1109
C
GLY
1110
n
110
GLY
1110
C
PRO
1111
n
111
PRO
1111
C
VAL
1112
n
112
VAL
1112
C
SER
1113
n
113
SER
1113
C
PRO
1114
n
114
PRO
1114
C
LEU
1115
n
115
LEU
1115
C
GLN
1116
n
116
GLN
1116
C
PRO
1117
n
117
PRO
1117
C
ASP
1118
n
118
ASP
1118
C
LYS
1119
n
119
LYS
1119
C
VAL
1120
n
120
VAL
1120
C
VAL
1121
n
121
VAL
1121
C
GLU
1122
n
122
GLU
1122
C
PHE
1123
n
123
PHE
1123
C
LEU
1124
n
124
LEU
1124
C
SER
1125
n
125
SER
1125
C
GLY
1126
n
126
GLY
1126
C
SER
1127
n
127
SER
1127
C
TYR
1128
n
128
TYR
1128
C
ALA
1129
n
129
ALA
1129
C
GLY
1130
n
130
GLY
1130
C
LEU
1131
n
131
LEU
1131
C
SER
1132
n
132
SER
1132
C
LEU
1133
n
133
LEU
1133
C
SER
1134
n
134
SER
1134
C
SER
1135
n
135
SER
1135
C
ARG
1136
n
136
ARG
1136
C
ARG
1137
n
137
ARG
1137
C
CYS
1138
n
138
CYS
1138
C
ASP
1139
n
139
ASP
1139
C
ASP
1140
n
140
ASP
1140
C
n
141
1141
C
n
142
1142
C
n
143
1143
C
n
144
1144
C
n
145
1145
C
n
146
1146
C
n
147
1147
C
n
148
1148
C
n
149
1149
C
n
150
1150
C
n
151
1151
C
THR
1152
n
152
THR
1152
C
THR
1153
n
153
THR
1153
C
PRO
1154
n
154
PRO
1154
C
PHE
1155
n
155
PHE
1155
C
LYS
1156
n
156
LYS
1156
C
HIS
1157
n
157
HIS
1157
C
VAL
1158
n
158
VAL
1158
C
ALA
1159
n
159
ALA
1159
C
LEU
1160
n
160
LEU
1160
C
CYS
1161
n
161
CYS
1161
C
SER
1162
n
162
SER
1162
C
VAL
1163
n
163
VAL
1163
C
GLY
1164
n
164
GLY
1164
C
ARG
1165
n
165
ARG
1165
C
ARG
1166
n
166
ARG
1166
C
ARG
1167
n
167
ARG
1167
C
GLY
1168
n
168
GLY
1168
C
THR
1169
n
169
THR
1169
C
LEU
1170
n
170
LEU
1170
C
ALA
1171
n
171
ALA
1171
C
VAL
1172
n
172
VAL
1172
C
TYR
1173
n
173
TYR
1173
C
GLY
1174
n
174
GLY
1174
C
ARG
1175
n
175
ARG
1175
C
ASP
1176
n
176
ASP
1176
C
PRO
1177
n
177
PRO
1177
C
GLU
1178
n
178
GLU
1178
C
TRP
1179
n
179
TRP
1179
C
VAL
1180
n
180
VAL
1180
C
THR
1181
n
181
THR
1181
C
GLN
1182
n
182
GLN
1182
C
ARG
1183
n
183
ARG
1183
C
PHE
1184
n
184
PHE
1184
C
PRO
1185
n
185
PRO
1185
C
ASP
1186
n
186
ASP
1186
C
LEU
1187
n
187
LEU
1187
C
THR
1188
n
188
THR
1188
C
ALA
1189
n
189
ALA
1189
C
ALA
1190
n
190
ALA
1190
C
ASP
1191
n
191
ASP
1191
C
ARG
1192
n
192
ARG
1192
C
ASP
1193
n
193
ASP
1193
C
GLY
1194
n
194
GLY
1194
C
LEU
1195
n
195
LEU
1195
C
ARG
1196
n
196
ARG
1196
C
ALA
1197
n
197
ALA
1197
C
GLN
1198
n
198
GLN
1198
C
TRP
1199
n
199
TRP
1199
C
GLN
1200
n
200
GLN
1200
C
n
201
1201
C
n
202
1202
C
n
203
1203
C
n
204
1204
C
n
205
1205
C
n
206
1206
C
n
207
1207
C
n
208
1208
C
n
209
1209
C
SER
1210
n
210
SER
1210
C
GLY
1211
n
211
GLY
1211
C
ASP
1212
n
212
ASP
1212
C
PRO
1213
n
213
PRO
1213
C
PHE
1214
n
214
PHE
1214
C
ARG
1215
n
215
ARG
1215
C
SER
1216
n
216
SER
1216
C
ASP
1217
n
217
ASP
1217
C
SER
1218
n
218
SER
1218
C
TYR
1219
n
219
TYR
1219
C
GLY
1220
n
220
GLY
1220
C
LEU
1221
n
221
LEU
1221
C
LEU
1222
n
222
LEU
1222
C
GLY
1223
n
223
GLY
1223
C
ASN
1224
n
224
ASN
1224
C
SER
1225
n
225
SER
1225
C
VAL
1226
n
226
VAL
1226
C
ASP
1227
n
227
ASP
1227
C
ALA
1228
n
228
ALA
1228
C
LEU
1229
n
229
LEU
1229
C
TYR
1230
n
230
TYR
1230
C
ILE
1231
n
231
ILE
1231
C
ARG
1232
n
232
ARG
1232
C
GLU
1233
n
233
GLU
1233
C
ARG
1234
n
234
ARG
1234
C
LEU
1235
n
235
LEU
1235
C
PRO
1236
n
236
PRO
1236
C
LYS
1237
n
237
LYS
1237
C
LEU
1238
n
238
LEU
1238
C
ARG
1239
n
239
ARG
1239
C
TYR
1240
n
240
TYR
1240
C
ASP
1241
n
241
ASP
1241
C
LYS
1242
n
242
LYS
1242
C
GLN
1243
n
243
GLN
1243
C
LEU
1244
n
244
LEU
1244
C
VAL
1245
n
245
VAL
1245
C
GLY
1246
n
246
GLY
1246
C
VAL
1247
n
247
VAL
1247
C
THR
1248
n
248
THR
1248
C
GLU
1249
n
249
GLU
1249
C
ARG
1250
n
250
ARG
1250
C
GLU
1251
n
251
GLU
1251
C
SER
1252
n
252
SER
1252
C
TYR
1253
n
253
TYR
1253
C
VAL
1254
n
254
VAL
1254
C
LYS
1255
n
255
LYS
1255
C
ALA
1256
n
256
ALA
1256
C
n
1
1301
D
n
2
1302
D
n
3
1303
D
ASP
1304
n
4
ASP
1304
D
GLU
1305
n
5
GLU
1305
D
GLN
1306
n
6
GLN
1306
D
GLN
1307
n
7
GLN
1307
D
SER
1308
n
8
SER
1308
D
GLN
1309
n
9
GLN
1309
D
ALA
1310
n
10
ALA
1310
D
VAL
1311
n
11
VAL
1311
D
ALA
1312
n
12
ALA
1312
D
PRO
1313
n
13
PRO
1313
D
VAL
1314
n
14
VAL
1314
D
TYR
1315
n
15
TYR
1315
D
VAL
1316
n
16
VAL
1316
D
GLY
1317
n
17
GLY
1317
D
GLY
1318
n
18
GLY
1318
D
PHE
1319
n
19
PHE
1319
D
LEU
1320
n
20
LEU
1320
D
ALA
1321
n
21
ALA
1321
D
ARG
1322
n
22
ARG
1322
D
TYR
1323
n
23
TYR
1323
D
ASP
1324
n
24
ASP
1324
D
GLN
1325
n
25
GLN
1325
D
SER
1326
n
26
SER
1326
D
PRO
1327
n
27
PRO
1327
D
ASP
1328
n
28
ASP
1328
D
GLU
1329
n
29
GLU
1329
D
ALA
1330
n
30
ALA
1330
D
GLU
1331
n
31
GLU
1331
D
LEU
1332
n
32
LEU
1332
D
LEU
1333
n
33
LEU
1333
D
LEU
1334
n
34
LEU
1334
D
PRO
1335
n
35
PRO
1335
D
ARG
1336
n
36
ARG
1336
D
ASP
1337
n
37
ASP
1337
D
VAL
1338
n
38
VAL
1338
D
VAL
1339
n
39
VAL
1339
D
GLU
1340
n
40
GLU
1340
D
HIS
1341
n
41
HIS
1341
D
TRP
1342
n
42
TRP
1342
D
LEU
1343
n
43
LEU
1343
D
HIS
1344
n
44
HIS
1344
D
ALA
1345
n
45
ALA
1345
D
GLN
1346
n
46
GLN
1346
D
n
47
1347
D
n
48
1348
D
n
49
1349
D
n
50
1350
D
n
51
1351
D
n
52
1352
D
LEU
1353
n
53
LEU
1353
D
SER
1354
n
54
SER
1354
D
VAL
1355
n
55
VAL
1355
D
ALA
1356
n
56
ALA
1356
D
LEU
1357
n
57
LEU
1357
D
PRO
1358
n
58
PRO
1358
D
LEU
1359
n
59
LEU
1359
D
ASN
1360
n
60
ASN
1360
D
ILE
1361
n
61
ILE
1361
D
ASN
1362
n
62
ASN
1362
D
HIS
1363
n
63
HIS
1363
D
ASP
1364
n
64
ASP
1364
D
ASP
1365
n
65
ASP
1365
D
THR
1366
n
66
THR
1366
D
ALA
1367
n
67
ALA
1367
D
VAL
1368
n
68
VAL
1368
D
VAL
1369
n
69
VAL
1369
D
GLY
1370
n
70
GLY
1370
D
HIS
1371
n
71
HIS
1371
D
VAL
1372
n
72
VAL
1372
D
ALA
1373
n
73
ALA
1373
D
ALA
1374
n
74
ALA
1374
D
MET
1375
n
75
MET
1375
D
GLN
1376
n
76
GLN
1376
D
SER
1377
n
77
SER
1377
D
VAL
1378
n
78
VAL
1378
D
ARG
1379
n
79
ARG
1379
D
ASP
1380
n
80
ASP
1380
D
GLY
1381
n
81
GLY
1381
D
LEU
1382
n
82
LEU
1382
D
PHE
1383
n
83
PHE
1383
D
CYS
1384
n
84
CYS
1384
D
LEU
1385
n
85
LEU
1385
D
GLY
1386
n
86
GLY
1386
D
CYS
1387
n
87
CYS
1387
D
VAL
1388
n
88
VAL
1388
D
THR
1389
n
89
THR
1389
D
SER
1390
n
90
SER
1390
D
PRO
1391
n
91
PRO
1391
D
ARG
1392
n
92
ARG
1392
D
PHE
1393
n
93
PHE
1393
D
LEU
1394
n
94
LEU
1394
D
GLU
1395
n
95
GLU
1395
D
ILE
1396
n
96
ILE
1396
D
VAL
1397
n
97
VAL
1397
D
ARG
1398
n
98
ARG
1398
D
ARG
1399
n
99
ARG
1399
D
ALA
1400
n
100
ALA
1400
D
SER
1401
n
101
SER
1401
D
GLU
1402
n
102
GLU
1402
D
LYS
1403
n
103
LYS
1403
D
SER
1404
n
104
SER
1404
D
GLU
1405
n
105
GLU
1405
D
LEU
1406
n
106
LEU
1406
D
VAL
1407
n
107
VAL
1407
D
SER
1408
n
108
SER
1408
D
ARG
1409
n
109
ARG
1409
D
GLY
1410
n
110
GLY
1410
D
PRO
1411
n
111
PRO
1411
D
VAL
1412
n
112
VAL
1412
D
SER
1413
n
113
SER
1413
D
PRO
1414
n
114
PRO
1414
D
LEU
1415
n
115
LEU
1415
D
GLN
1416
n
116
GLN
1416
D
PRO
1417
n
117
PRO
1417
D
ASP
1418
n
118
ASP
1418
D
LYS
1419
n
119
LYS
1419
D
VAL
1420
n
120
VAL
1420
D
VAL
1421
n
121
VAL
1421
D
GLU
1422
n
122
GLU
1422
D
PHE
1423
n
123
PHE
1423
D
LEU
1424
n
124
LEU
1424
D
SER
1425
n
125
SER
1425
D
GLY
1426
n
126
GLY
1426
D
SER
1427
n
127
SER
1427
D
TYR
1428
n
128
TYR
1428
D
ALA
1429
n
129
ALA
1429
D
GLY
1430
n
130
GLY
1430
D
LEU
1431
n
131
LEU
1431
D
SER
1432
n
132
SER
1432
D
LEU
1433
n
133
LEU
1433
D
SER
1434
n
134
SER
1434
D
SER
1435
n
135
SER
1435
D
ARG
1436
n
136
ARG
1436
D
ARG
1437
n
137
ARG
1437
D
CYS
1438
n
138
CYS
1438
D
ASP
1439
n
139
ASP
1439
D
ASP
1440
n
140
ASP
1440
D
VAL
1441
n
141
VAL
1441
D
GLU
1442
n
142
GLU
1442
D
GLN
1443
n
143
GLN
1443
D
n
144
1444
D
n
145
1445
D
n
146
1446
D
n
147
1447
D
n
148
1448
D
n
149
1449
D
n
150
1450
D
n
151
1451
D
THR
1452
n
152
THR
1452
D
THR
1453
n
153
THR
1453
D
PRO
1454
n
154
PRO
1454
D
PHE
1455
n
155
PHE
1455
D
LYS
1456
n
156
LYS
1456
D
HIS
1457
n
157
HIS
1457
D
VAL
1458
n
158
VAL
1458
D
ALA
1459
n
159
ALA
1459
D
LEU
1460
n
160
LEU
1460
D
CYS
1461
n
161
CYS
1461
D
SER
1462
n
162
SER
1462
D
VAL
1463
n
163
VAL
1463
D
GLY
1464
n
164
GLY
1464
D
ARG
1465
n
165
ARG
1465
D
ARG
1466
n
166
ARG
1466
D
ARG
1467
n
167
ARG
1467
D
GLY
1468
n
168
GLY
1468
D
THR
1469
n
169
THR
1469
D
LEU
1470
n
170
LEU
1470
D
ALA
1471
n
171
ALA
1471
D
VAL
1472
n
172
VAL
1472
D
TYR
1473
n
173
TYR
1473
D
GLY
1474
n
174
GLY
1474
D
ARG
1475
n
175
ARG
1475
D
ASP
1476
n
176
ASP
1476
D
PRO
1477
n
177
PRO
1477
D
GLU
1478
n
178
GLU
1478
D
TRP
1479
n
179
TRP
1479
D
VAL
1480
n
180
VAL
1480
D
THR
1481
n
181
THR
1481
D
GLN
1482
n
182
GLN
1482
D
ARG
1483
n
183
ARG
1483
D
PHE
1484
n
184
PHE
1484
D
PRO
1485
n
185
PRO
1485
D
ASP
1486
n
186
ASP
1486
D
LEU
1487
n
187
LEU
1487
D
THR
1488
n
188
THR
1488
D
ALA
1489
n
189
ALA
1489
D
ALA
1490
n
190
ALA
1490
D
ASP
1491
n
191
ASP
1491
D
ARG
1492
n
192
ARG
1492
D
ASP
1493
n
193
ASP
1493
D
GLY
1494
n
194
GLY
1494
D
LEU
1495
n
195
LEU
1495
D
ARG
1496
n
196
ARG
1496
D
ALA
1497
n
197
ALA
1497
D
GLN
1498
n
198
GLN
1498
D
TRP
1499
n
199
TRP
1499
D
GLN
1500
n
200
GLN
1500
D
n
201
1501
D
n
202
1502
D
n
203
1503
D
n
204
1504
D
n
205
1505
D
n
206
1506
D
n
207
1507
D
n
208
1508
D
n
209
1509
D
SER
1510
n
210
SER
1510
D
GLY
1511
n
211
GLY
1511
D
ASP
1512
n
212
ASP
1512
D
PRO
1513
n
213
PRO
1513
D
PHE
1514
n
214
PHE
1514
D
ARG
1515
n
215
ARG
1515
D
SER
1516
n
216
SER
1516
D
ASP
1517
n
217
ASP
1517
D
SER
1518
n
218
SER
1518
D
TYR
1519
n
219
TYR
1519
D
GLY
1520
n
220
GLY
1520
D
LEU
1521
n
221
LEU
1521
D
LEU
1522
n
222
LEU
1522
D
GLY
1523
n
223
GLY
1523
D
ASN
1524
n
224
ASN
1524
D
SER
1525
n
225
SER
1525
D
VAL
1526
n
226
VAL
1526
D
ASP
1527
n
227
ASP
1527
D
ALA
1528
n
228
ALA
1528
D
LEU
1529
n
229
LEU
1529
D
TYR
1530
n
230
TYR
1530
D
ILE
1531
n
231
ILE
1531
D
ARG
1532
n
232
ARG
1532
D
GLU
1533
n
233
GLU
1533
D
ARG
1534
n
234
ARG
1534
D
LEU
1535
n
235
LEU
1535
D
PRO
1536
n
236
PRO
1536
D
LYS
1537
n
237
LYS
1537
D
LEU
1538
n
238
LEU
1538
D
ARG
1539
n
239
ARG
1539
D
TYR
1540
n
240
TYR
1540
D
ASP
1541
n
241
ASP
1541
D
LYS
1542
n
242
LYS
1542
D
GLN
1543
n
243
GLN
1543
D
LEU
1544
n
244
LEU
1544
D
VAL
1545
n
245
VAL
1545
D
GLY
1546
n
246
GLY
1546
D
VAL
1547
n
247
VAL
1547
D
THR
1548
n
248
THR
1548
D
GLU
1549
n
249
GLU
1549
D
ARG
1550
n
250
ARG
1550
D
GLU
1551
n
251
GLU
1551
D
SER
1552
n
252
SER
1552
D
TYR
1553
n
253
TYR
1553
D
VAL
1554
n
254
VAL
1554
D
LYS
1555
n
255
LYS
1555
D
ALA
1556
n
256
ALA
1556
D
author_and_software_defined_assembly
PISA
2
dimeric
author_and_software_defined_assembly
PISA
2
dimeric
software_defined_assembly
PISA
4
tetrameric
6210
-14
19870
6210
-15
19680
13120
-32
38860
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
VAL
172
A
O
VAL
172
A
N
GLY
17
A
N
GLY
17
A
N
VAL
16
A
N
VAL
16
A
O
GLY
86
A
O
GLY
86
A
O
PHE
83
A
O
PHE
83
A
N
GLN
76
A
N
GLN
76
A
O
VAL
69
A
O
VAL
69
A
N
LEU
59
A
N
LEU
59
A
N
ASN
60
A
N
ASN
60
A
O
LEU
160
A
O
LEU
160
A
O
CYS
161
A
O
CYS
161
A
N
GLY
130
A
N
GLY
130
B
O
VAL
472
B
O
VAL
172
B
N
GLY
317
B
N
GLY
17
B
N
VAL
316
B
N
VAL
16
B
O
GLY
386
B
O
GLY
86
B
O
PHE
383
B
O
PHE
83
B
N
GLN
376
B
N
GLN
76
B
O
VAL
369
B
O
VAL
69
B
N
LEU
359
B
N
LEU
59
B
N
ASN
360
B
N
ASN
60
B
O
LEU
460
B
O
LEU
160
B
O
CYS
461
B
O
CYS
161
B
N
GLY
430
B
N
GLY
130
C
O
GLY
1174
C
O
GLY
174
C
N
TYR
1015
C
N
TYR
15
C
N
VAL
1016
C
N
VAL
16
C
O
GLY
1086
C
O
GLY
86
C
O
PHE
1083
C
O
PHE
83
C
N
GLN
1076
C
N
GLN
76
C
O
VAL
1069
C
O
VAL
69
C
N
LEU
1059
C
N
LEU
59
C
N
ASN
1060
C
N
ASN
60
C
O
LEU
1160
C
O
LEU
160
C
O
CYS
1161
C
O
CYS
161
C
N
GLY
1130
C
N
GLY
130
D
O
GLY
1474
D
O
GLY
174
D
N
TYR
1315
D
N
TYR
15
D
N
VAL
1316
D
N
VAL
16
D
O
GLY
1386
D
O
GLY
86
D
O
PHE
1383
D
O
PHE
83
D
N
GLN
1376
D
N
GLN
76
D
O
VAL
1369
D
O
VAL
69
D
N
LEU
1359
D
N
LEU
59
D
N
ASN
1360
D
N
ASN
60
D
O
LEU
1460
D
O
LEU
160
D
O
CYS
1461
D
O
CYS
161
D
N
GLY
1430
D
N
GLY
130
1
A
MET
1
A
MET
1
1
Y
1
A
THR
2
A
THR
2
1
Y
1
A
MET
3
A
MET
3
1
Y
1
A
GLY
47
A
GLY
47
1
Y
1
A
GLN
48
A
GLN
48
1
Y
1
A
GLY
49
A
GLY
49
1
Y
1
A
GLN
50
A
GLN
50
1
Y
1
A
PRO
51
A
PRO
51
1
Y
1
A
SER
52
A
SER
52
1
Y
1
A
ALA
144
A
ALA
144
1
Y
1
A
THR
145
A
THR
145
1
Y
1
A
SER
146
A
SER
146
1
Y
1
A
LEU
147
A
LEU
147
1
Y
1
A
SER
148
A
SER
148
1
Y
1
A
GLY
149
A
GLY
149
1
Y
1
A
SER
150
A
SER
150
1
Y
1
A
GLU
151
A
GLU
151
1
Y
1
A
ARG
201
A
ARG
201
1
Y
1
A
CYS
202
A
CYS
202
1
Y
1
A
GLY
203
A
GLY
203
1
Y
1
A
SER
204
A
SER
204
1
Y
1
A
THR
205
A
THR
205
1
Y
1
A
ALA
206
A
ALA
206
1
Y
1
A
VAL
207
A
VAL
207
1
Y
1
A
ASP
208
A
ASP
208
1
Y
1
A
ALA
209
A
ALA
209
1
Y
1
B
MET
301
B
MET
1
1
Y
1
B
THR
302
B
THR
2
1
Y
1
B
MET
303
B
MET
3
1
Y
1
B
GLY
347
B
GLY
47
1
Y
1
B
GLN
348
B
GLN
48
1
Y
1
B
GLY
349
B
GLY
49
1
Y
1
B
GLN
350
B
GLN
50
1
Y
1
B
PRO
351
B
PRO
51
1
Y
1
B
SER
352
B
SER
52
1
Y
1
B
LEU
353
B
LEU
53
1
Y
1
B
ALA
444
B
ALA
144
1
Y
1
B
THR
445
B
THR
145
1
Y
1
B
SER
446
B
SER
146
1
Y
1
B
LEU
447
B
LEU
147
1
Y
1
B
SER
448
B
SER
148
1
Y
1
B
GLY
449
B
GLY
149
1
Y
1
B
SER
450
B
SER
150
1
Y
1
B
GLU
451
B
GLU
151
1
Y
1
B
ARG
501
B
ARG
201
1
Y
1
B
CYS
502
B
CYS
202
1
Y
1
B
GLY
503
B
GLY
203
1
Y
1
B
SER
504
B
SER
204
1
Y
1
B
THR
505
B
THR
205
1
Y
1
B
ALA
506
B
ALA
206
1
Y
1
B
VAL
507
B
VAL
207
1
Y
1
B
ASP
508
B
ASP
208
1
Y
1
C
MET
1001
C
MET
1
1
Y
1
C
THR
1002
C
THR
2
1
Y
1
C
MET
1003
C
MET
3
1
Y
1
C
GLY
1047
C
GLY
47
1
Y
1
C
GLN
1048
C
GLN
48
1
Y
1
C
GLY
1049
C
GLY
49
1
Y
1
C
GLN
1050
C
GLN
50
1
Y
1
C
PRO
1051
C
PRO
51
1
Y
1
C
SER
1052
C
SER
52
1
Y
1
C
VAL
1141
C
VAL
141
1
Y
1
C
GLU
1142
C
GLU
142
1
Y
1
C
GLN
1143
C
GLN
143
1
Y
1
C
ALA
1144
C
ALA
144
1
Y
1
C
THR
1145
C
THR
145
1
Y
1
C
SER
1146
C
SER
146
1
Y
1
C
LEU
1147
C
LEU
147
1
Y
1
C
SER
1148
C
SER
148
1
Y
1
C
GLY
1149
C
GLY
149
1
Y
1
C
SER
1150
C
SER
150
1
Y
1
C
GLU
1151
C
GLU
151
1
Y
1
C
ARG
1201
C
ARG
201
1
Y
1
C
CYS
1202
C
CYS
202
1
Y
1
C
GLY
1203
C
GLY
203
1
Y
1
C
SER
1204
C
SER
204
1
Y
1
C
THR
1205
C
THR
205
1
Y
1
C
ALA
1206
C
ALA
206
1
Y
1
C
VAL
1207
C
VAL
207
1
Y
1
C
ASP
1208
C
ASP
208
1
Y
1
C
ALA
1209
C
ALA
209
1
Y
1
D
MET
1301
D
MET
1
1
Y
1
D
THR
1302
D
THR
2
1
Y
1
D
MET
1303
D
MET
3
1
Y
1
D
GLY
1347
D
GLY
47
1
Y
1
D
GLN
1348
D
GLN
48
1
Y
1
D
GLY
1349
D
GLY
49
1
Y
1
D
GLN
1350
D
GLN
50
1
Y
1
D
PRO
1351
D
PRO
51
1
Y
1
D
SER
1352
D
SER
52
1
Y
1
D
ALA
1444
D
ALA
144
1
Y
1
D
THR
1445
D
THR
145
1
Y
1
D
SER
1446
D
SER
146
1
Y
1
D
LEU
1447
D
LEU
147
1
Y
1
D
SER
1448
D
SER
148
1
Y
1
D
GLY
1449
D
GLY
149
1
Y
1
D
SER
1450
D
SER
150
1
Y
1
D
GLU
1451
D
GLU
151
1
Y
1
D
ARG
1501
D
ARG
201
1
Y
1
D
CYS
1502
D
CYS
202
1
Y
1
D
GLY
1503
D
GLY
203
1
Y
1
D
SER
1504
D
SER
204
1
Y
1
D
THR
1505
D
THR
205
1
Y
1
D
ALA
1506
D
ALA
206
1
Y
1
D
VAL
1507
D
VAL
207
1
Y
1
D
ASP
1508
D
ASP
208
1
Y
1
D
ALA
1509
D
ALA
209
1
Y
1
B
B
OE1
NH2
GLU
ARG
395
398
2.19
1
D
TYR
1530
0.063
SIDE CHAIN
1
A
SER
54
-58.10
-98.27
1
A
ASN
62
38.84
52.54
1
A
SER
113
6.40
-87.02
1
A
ASP
118
-154.62
84.92
1
A
TYR
128
-116.46
72.56
1
A
CYS
138
-78.86
-71.82
1
A
ASP
139
49.47
6.79
1
A
ASP
140
63.21
79.40
1
A
VAL
141
-152.30
-114.35
1
A
VAL
163
-172.36
142.12
1
A
TRP
199
-68.41
27.39
1
B
ASN
362
36.61
53.94
1
B
SER
413
6.37
-87.51
1
B
ASP
418
-158.43
82.78
1
B
TYR
428
-116.89
71.70
1
B
CYS
438
-79.96
-71.58
1
B
ASP
439
49.17
7.35
1
B
ASP
440
62.97
79.45
1
B
VAL
441
-152.32
-114.54
1
B
VAL
463
-172.00
142.72
1
B
SER
510
74.03
39.29
1
B
GLU
533
49.97
29.65
1
C
VAL
1011
-89.59
30.25
1
C
LEU
1034
-151.40
81.80
1
C
ALA
1045
-91.21
49.82
1
C
SER
1054
-48.88
-75.46
1
C
ALA
1056
-34.68
117.17
1
C
ASN
1062
32.96
49.70
1
C
HIS
1063
70.79
-3.63
1
C
ALA
1067
-109.22
48.88
1
C
SER
1113
7.11
-73.85
1
C
ASP
1118
-151.73
89.36
1
C
TYR
1128
-118.65
61.77
1
C
ARG
1137
-42.05
104.71
1
C
CYS
1138
-66.10
87.06
1
C
THR
1169
-90.86
45.01
1
C
TRP
1199
-69.80
34.19
1
C
SER
1216
-121.66
-165.61
1
C
VAL
1247
-57.67
-3.05
1
D
VAL
1311
-89.64
31.18
1
D
LEU
1334
-151.43
80.31
1
D
SER
1354
-8.78
-73.81
1
D
ALA
1356
-35.18
116.94
1
D
ASN
1362
35.34
47.30
1
D
HIS
1363
70.80
-1.40
1
D
SER
1413
8.82
-74.39
1
D
ASP
1418
-150.75
89.22
1
D
TYR
1428
-118.92
60.18
1
D
ARG
1437
-43.16
105.57
1
D
CYS
1438
-66.28
86.89
1
D
THR
1469
-92.70
43.35
1
D
TRP
1499
-72.63
22.27
1
D
SER
1516
-119.17
-165.78
1
D
VAL
1547
-57.03
-3.18
PROTEIN_REP.PARAM
PROTEIN.TOP
PARAM.HCMV
TOP.HCMV
36.4
14.25
0.00
0.00
-11.50
0.00
-2.75
0.273
0.006
0.223
0.223
2.70
25.88
1910
27260
7.0
81.7
RANDOM
2089328.80
2089328.80
0.000000
1
RESTRAINED
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
Engh & Huber
FLAT MODEL
16.5992
0.323366
0.41
0.33
5.00
0.39
0.26
2.70
25.88
0
7392
204
0
7188
0.007
1.3
23.1
0.93
1.30
1.50
2.31
2.00
1.58
2.00
2.45
2.50
1
CONSTR
1
X-RAY DIFFRACTION
0.301
0.020
0.257
2.87
230
3188
6
6.7
62.4
36.2
2.70
30.00
1NJU
32973
32973
0.0
0.0
1
95.2
2.70
2.80
1
93.5
refinement
CNS
1.0
data reduction
DENZO
data scaling
SCALEPACK
phasing
COMO
Complex structure of HCMV Protease and a peptidomimetic inhibitor
1
N
N
1
N
N
1
N
N
1
N
N
2
N
N
2
N
N
2
N
N
2
N
N
A
GLU
5
A
GLU
5
HELX_P
A
VAL
11
A
VAL
11
1
1
7
A
GLU
29
A
GLU
29
HELX_P
A
LEU
33
A
LEU
33
5
2
5
A
PRO
35
A
PRO
35
HELX_P
A
GLN
46
A
GLN
46
1
3
12
A
SER
90
A
SER
90
HELX_P
A
LYS
103
A
LYS
103
1
4
14
A
SER
104
A
SER
104
HELX_P
A
ARG
109
A
ARG
109
1
5
6
A
ASP
118
A
ASP
118
HELX_P
A
TYR
128
A
TYR
128
1
6
11
A
ASP
176
A
ASP
176
HELX_P
A
GLN
182
A
GLN
182
1
7
7
A
THR
188
A
THR
188
HELX_P
A
TRP
199
A
TRP
199
1
8
12
A
ASP
217
A
ASP
217
HELX_P
A
TYR
230
A
TYR
230
1
9
14
A
GLU
233
A
GLU
233
HELX_P
A
VAL
245
A
VAL
245
1
10
13
B
GLU
305
B
GLU
5
HELX_P
B
VAL
311
B
VAL
11
1
11
7
B
GLU
329
B
GLU
29
HELX_P
B
LEU
333
B
LEU
33
5
12
5
B
PRO
335
B
PRO
35
HELX_P
B
GLN
346
B
GLN
46
1
13
12
B
SER
390
B
SER
90
HELX_P
B
LYS
403
B
LYS
103
1
14
14
B
SER
404
B
SER
104
HELX_P
B
ARG
409
B
ARG
109
1
15
6
B
ASP
418
B
ASP
118
HELX_P
B
TYR
428
B
TYR
128
1
16
11
B
ASP
476
B
ASP
176
HELX_P
B
GLN
482
B
GLN
182
1
17
7
B
THR
488
B
THR
188
HELX_P
B
TRP
499
B
TRP
199
1
18
12
B
ASP
517
B
ASP
217
HELX_P
B
TYR
530
B
TYR
230
1
19
14
B
GLU
533
B
GLU
233
HELX_P
B
VAL
545
B
VAL
245
1
20
13
C
GLU
1005
C
GLU
5
HELX_P
C
VAL
1011
C
VAL
11
1
21
7
C
GLU
1029
C
GLU
29
HELX_P
C
LEU
1033
C
LEU
33
5
22
5
C
PRO
1035
C
PRO
35
HELX_P
C
ALA
1045
C
ALA
45
1
23
11
C
SER
1090
C
SER
90
HELX_P
C
GLU
1102
C
GLU
102
1
24
13
C
SER
1104
C
SER
104
HELX_P
C
ARG
1109
C
ARG
109
1
25
6
C
ASP
1118
C
ASP
118
HELX_P
C
TYR
1128
C
TYR
128
1
26
11
C
ASP
1176
C
ASP
176
HELX_P
C
GLN
1182
C
GLN
182
1
27
7
C
THR
1188
C
THR
188
HELX_P
C
ALA
1197
C
ALA
197
1
28
10
C
ASP
1217
C
ASP
217
HELX_P
C
LEU
1229
C
LEU
229
1
29
13
C
GLU
1233
C
GLU
233
HELX_P
C
GLY
1246
C
GLY
246
1
30
14
D
GLU
1305
D
GLU
5
HELX_P
D
VAL
1311
D
VAL
11
1
31
7
D
GLU
1329
D
GLU
29
HELX_P
D
LEU
1333
D
LEU
33
5
32
5
D
PRO
1335
D
PRO
35
HELX_P
D
ALA
1345
D
ALA
45
1
33
11
D
SER
1390
D
SER
90
HELX_P
D
GLU
1402
D
GLU
102
1
34
13
D
SER
1404
D
SER
104
HELX_P
D
ARG
1409
D
ARG
109
1
35
6
D
ASP
1418
D
ASP
118
HELX_P
D
TYR
1428
D
TYR
128
1
36
11
D
ASP
1476
D
ASP
176
HELX_P
D
ARG
1483
D
ARG
183
1
37
8
D
THR
1488
D
THR
188
HELX_P
D
ALA
1497
D
ALA
197
1
38
10
D
ASP
1517
D
ASP
217
HELX_P
D
LEU
1529
D
LEU
229
1
39
13
D
GLU
1533
D
GLU
233
HELX_P
D
GLY
1546
D
GLY
246
1
40
14
covale
1.439
none
A
SER
132
A
OG
SER
132
1_555
A
0FP
260
E
C4
0FP
1_555
covale
1.437
none
B
SER
432
B
OG
SER
132
1_555
B
0FP
560
F
C4
0FP
1_555
covale
1.444
none
C
SER
1132
C
OG
SER
132
1_555
C
0FP
1260
G
C4
0FP
1_555
covale
1.429
none
D
SER
1432
D
OG
SER
132
1_555
D
0FP
1560
H
C4
0FP
1_555
HYDROLASE/HYDROLASE INHIBITOR
Protease, Peptidomimetic Inhibitor, Induced-fit, HYDROLASE-HYDROLASE INHIBITOR complex
VP40_HCMVA
UNP
1
1
P16753
MTMDEQQSQAVAPVYVGGFLARYDQSPDEAELLLPRDVVEHWLHAQGQGQPSLSVALPLNINHDDTAVVGHVAAMQSVRD
GLFCLGCVTSPRFLEIVRRASEKSELVSRGPVSPLQPDKVVEFLSGSYAGLSLSSRRCDDVEAATSLSGSETTPFKHVAL
CSVGRRRGTLAVYGRDPEWVTQRFPDLTAADRDGLRAQWQRCGSTAVDASGDPFRSDSYGLLGNSVDALYIRERLPKLRY
DKQLVGVTERESYVKA
1
256
1NJU
1
256
P16753
A
1
1
256
1
256
1NJU
301
556
P16753
B
1
1
256
1
256
1NJU
1001
1256
P16753
C
1
1
256
1
256
1NJU
1301
1556
P16753
D
1
1
256
1
ALA
engineered mutation
GLN
143
1NJU
A
P16753
UNP
143
143
2
ALA
engineered mutation
GLN
443
1NJU
B
P16753
UNP
143
143
3
ALA
engineered mutation
GLN
1143
1NJU
C
P16753
UNP
143
143
4
ALA
engineered mutation
GLN
1443
1NJU
D
P16753
UNP
143
143
7
7
7
7
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
A
VAL
172
A
VAL
172
A
GLY
174
A
GLY
174
A
VAL
14
A
VAL
14
A
ARG
22
A
ARG
22
A
GLY
81
A
GLY
81
A
VAL
88
A
VAL
88
A
VAL
68
A
VAL
68
A
SER
77
A
SER
77
A
PRO
58
A
PRO
58
A
ILE
61
A
ILE
61
A
PHE
155
A
PHE
155
A
CYS
161
A
CYS
161
A
GLY
130
A
GLY
130
A
ARG
136
A
ARG
136
B
VAL
472
B
VAL
172
B
GLY
474
B
GLY
174
B
VAL
314
B
VAL
14
B
ARG
322
B
ARG
22
B
GLY
381
B
GLY
81
B
VAL
388
B
VAL
88
B
VAL
368
B
VAL
68
B
SER
377
B
SER
77
B
PRO
358
B
PRO
58
B
ILE
361
B
ILE
61
B
PHE
455
B
PHE
155
B
CYS
461
B
CYS
161
B
GLY
430
B
GLY
130
B
ARG
436
B
ARG
136
C
VAL
1172
C
VAL
172
C
GLY
1174
C
GLY
174
C
VAL
1014
C
VAL
14
C
ARG
1022
C
ARG
22
C
GLY
1081
C
GLY
81
C
VAL
1088
C
VAL
88
C
VAL
1068
C
VAL
68
C
VAL
1078
C
VAL
78
C
LEU
1057
C
LEU
57
C
ILE
1061
C
ILE
61
C
PHE
1155
C
PHE
155
C
CYS
1161
C
CYS
161
C
GLY
1130
C
GLY
130
C
ARG
1136
C
ARG
136
D
VAL
1472
D
VAL
172
D
GLY
1474
D
GLY
174
D
VAL
1314
D
VAL
14
D
ARG
1322
D
ARG
22
D
GLY
1381
D
GLY
81
D
VAL
1388
D
VAL
88
D
VAL
1368
D
VAL
68
D
VAL
1378
D
VAL
78
D
LEU
1357
D
LEU
57
D
ILE
1361
D
ILE
61
D
PHE
1455
D
PHE
155
D
CYS
1461
D
CYS
161
D
GLY
1430
D
GLY
130
D
ARG
1436
D
ARG
136
BINDING SITE FOR RESIDUE 0FP A 260
A
0FP
260
Software
15
BINDING SITE FOR RESIDUE 0FP B 560
B
0FP
560
Software
16
BINDING SITE FOR RESIDUE 0FP C 1260
C
0FP
1260
Software
15
BINDING SITE FOR RESIDUE 0FP D 1560
D
0FP
1560
Software
17
A
GLU
31
A
GLU
31
15
1_555
A
ASN
62
A
ASN
62
15
1_555
A
HIS
63
A
HIS
63
15
1_555
A
SER
132
A
SER
132
15
1_555
A
LEU
133
A
LEU
133
15
1_555
A
SER
134
A
SER
134
15
1_555
A
SER
135
A
SER
135
15
1_555
A
ARG
136
A
ARG
136
15
1_555
A
ARG
137
A
ARG
137
15
1_555
A
CYS
161
A
CYS
161
15
1_555
A
VAL
163
A
VAL
163
15
1_555
A
GLY
164
A
GLY
164
15
1_555
A
ARG
165
A
ARG
165
15
1_555
A
ARG
166
A
ARG
166
15
1_555
A
ILE
231
A
ILE
231
15
1_555
B
GLU
331
B
GLU
31
16
1_555
B
ASN
362
B
ASN
62
16
1_555
B
HIS
363
B
HIS
63
16
1_555
B
SER
432
B
SER
132
16
1_555
B
LEU
433
B
LEU
133
16
1_555
B
SER
434
B
SER
134
16
1_555
B
SER
435
B
SER
135
16
1_555
B
ARG
436
B
ARG
136
16
1_555
B
ARG
437
B
ARG
137
16
1_555
B
LYS
456
B
LYS
156
16
1_555
B
CYS
461
B
CYS
161
16
1_555
B
VAL
463
B
VAL
163
16
1_555
B
GLY
464
B
GLY
164
16
1_555
B
ARG
465
B
ARG
165
16
1_555
B
ARG
466
B
ARG
166
16
1_555
B
ILE
531
B
ILE
231
16
1_555
C
GLU
1031
C
GLU
31
15
1_555
C
ASN
1062
C
ASN
62
15
1_555
C
HIS
1063
C
HIS
63
15
1_555
C
SER
1132
C
SER
132
15
1_555
C
LEU
1133
C
LEU
133
15
1_555
C
SER
1134
C
SER
134
15
1_555
C
SER
1135
C
SER
135
15
1_555
C
ARG
1136
C
ARG
136
15
1_555
C
ARG
1137
C
ARG
137
15
1_555
C
LYS
1156
C
LYS
156
15
1_555
C
CYS
1161
C
CYS
161
15
1_555
C
VAL
1163
C
VAL
163
15
1_555
C
GLY
1164
C
GLY
164
15
1_555
C
ARG
1165
C
ARG
165
15
1_555
C
ILE
1231
C
ILE
231
15
1_555
D
GLU
1331
D
GLU
31
17
1_555
D
HIS
1363
D
HIS
63
17
1_555
D
SER
1432
D
SER
132
17
1_555
D
LEU
1433
D
LEU
133
17
1_555
D
SER
1434
D
SER
134
17
1_555
D
SER
1435
D
SER
135
17
1_555
D
ARG
1436
D
ARG
136
17
1_555
D
ARG
1437
D
ARG
137
17
1_555
D
ARG
1437
D
ARG
137
17
2_555
D
ASP
1439
D
ASP
139
17
2_555
D
LYS
1456
D
LYS
156
17
1_555
D
CYS
1461
D
CYS
161
17
1_555
D
VAL
1463
D
VAL
163
17
1_555
D
GLY
1464
D
GLY
164
17
1_555
D
ARG
1465
D
ARG
165
17
1_555
D
ARG
1466
D
ARG
166
17
1_555
D
ILE
1531
D
ILE
231
17
1_555
18
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