0.008969 0.005178 0.000000 0.000000 0.010356 0.000000 0.000000 0.000000 0.019646 0.000000 0.000000 0.000000 McGrath, W.J. Ding, J. Sweet, R.M. Mangel, W.F. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 111.500 111.500 50.900 C2 H4 O2 60.052 ACETIC ACID non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N C N 2 N O N 3 N O N 4 N C N 5 N H N 6 N H N 7 N H N 8 N H N 9 N N N 10 S C N 11 N C N 12 N O N 13 N C N 14 N O N 15 N H N 16 N H N 17 N H N 18 N H N 19 N H N 20 N H N 21 N H N 22 N N N 23 S C N 24 N C N 25 N O N 26 N C N 27 N C N 28 N C N 29 N N N 30 N C N 31 N N N 32 N N N 33 N O N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N N N 50 S C N 51 N C N 52 N O N 53 N C N 54 N C N 55 N O N 56 N N N 57 N O N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N N N 67 S C N 68 N C N 69 N O N 70 N C N 71 N C N 72 N O N 73 N O N 74 N O N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N N N 83 R C N 84 N C N 85 N O N 86 N C N 87 N S N 88 N O N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N N N 97 S C N 98 N C N 99 N O N 100 N C N 101 N C N 102 N C N 103 N O N 104 N N N 105 N O N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N N N 117 S C N 118 N C N 119 N O N 120 N C N 121 N C N 122 N C N 123 N O N 124 N O N 125 N O N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N N N 136 N C N 137 N C N 138 N O N 139 N O N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N N N 146 S C N 147 N C N 148 N O N 149 N C Y 150 N C Y 151 N N Y 152 N C Y 153 N C Y 154 N N N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N O N 167 N H N 168 N H N 169 N N N 170 S C N 171 N C N 172 N O N 173 S C N 174 N C N 175 N C N 176 N C N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 S C N 193 N C N 194 N O N 195 N C N 196 N C N 197 N C N 198 N C N 199 N O N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N N N 214 S C N 215 N C N 216 N O N 217 N C N 218 N C N 219 N C N 220 N C N 221 N N N 222 N O N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N N N 239 S C N 240 N C N 241 N O N 242 N C N 243 N C N 244 N S N 245 N C N 246 N O N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N N N 259 S C N 260 N C N 261 N O N 262 N C Y 263 N C Y 264 N C Y 265 N C Y 266 N C Y 267 N C Y 268 N C N 269 N O N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N N N 282 S C N 283 N C N 284 N O N 285 N C N 286 N C N 287 N C N 288 N O N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N N N 299 S C N 300 N C N 301 N O N 302 N C N 303 N O N 304 N O N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N N N 313 S C N 314 N C N 315 N O N 316 R C N 317 N O N 318 N C N 319 N O N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N N N 330 S C N 331 N C N 332 N O N 333 N C Y 334 N C Y 335 N C Y 336 N C Y 337 N N Y 338 N C Y 339 N C Y 340 N C Y 341 N C Y 342 N C N 343 N O N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N N N 357 S C N 358 N C N 359 N O N 360 N C Y 361 N C Y 362 N C Y 363 N C Y 364 N C Y 365 N C Y 366 N C N 367 N O N 368 N O N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N N N 381 S C N 382 N C N 383 N O N 384 N C N 385 N C N 386 N C N 387 N O N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 1 N doub N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N doub N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N doub N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N doub N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N doub N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N doub N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N doub N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N doub N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N doub N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N doub N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N doub N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N doub N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N doub N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N doub N 143 N sing N 144 N sing N 145 N sing N 146 N sing Y 147 N sing Y 148 N doub Y 149 N doub N 150 N sing Y 151 N sing N 152 N sing Y 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N doub N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N doub N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N doub N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N doub N 251 N sing N 252 N sing N 253 N sing N 254 N sing Y 255 N doub Y 256 N sing Y 257 N sing N 258 N sing Y 259 N doub N 260 N sing Y 261 N doub N 262 N sing Y 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N doub N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N doub N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N doub N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N doub N 320 N sing N 321 N sing N 322 N sing N 323 N sing Y 324 N doub Y 325 N sing Y 326 N sing N 327 N sing Y 328 N doub Y 329 N sing Y 330 N sing N 331 N sing Y 332 N sing Y 333 N doub N 334 N sing Y 335 N doub N 336 N sing Y 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N doub N 348 N sing N 349 N sing N 350 N sing N 351 N sing Y 352 N doub Y 353 N sing Y 354 N sing N 355 N sing Y 356 N doub N 357 N sing Y 358 N doub N 359 N sing Y 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N doub N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing NE Biochim.Biophys.Acta BBACAQ 0113 0006-3002 1648 1 11 10.1016/S1570-9639(03)00024-4 12758141 Crystallographic structure at 1.6-A resolution of the human adenovirus proteinase in a covalent complex with its 11-amino-acid peptide cofactor: insights on a new fold 2003 UK Embo J. EMJODG 0897 0261-4189 15 1778 1783 Crystal Structure of the Human Adenovirus Proteinase with its 11 Amino-acid Cofactor 1996 US J.Biol.Chem. JBCHA3 0071 0021-9258 271 536 543 Characterization of Three Components of Human Adenovirus Proteinase Activity in vitro 1996 UK Nature NATUAS 0006 0028-0836 361 274 275 Viral DNA and a Viral Peptide can act as Cofactors of Adenovirus Virion Proteinase Activity 1993 10.2210/pdb1nln/pdb pdb_00001nln 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 collimator AREA DETECTOR 1995-08-10 MARRESEARCH Si crystal SINGLE WAVELENGTH M x-ray 1 1.15 1.0 X12C NSLS 1.15 SYNCHROTRON NSLS BEAMLINE X12C 23114.350 Adenain 3.4.22.39 adenovirus proteinase 1 man polymer 1353.640 PVIC pvic peptide 1 syn polymer 60.052 ACETIC ACID 1 syn non-polymer 18.015 water 238 nat water Endoprotease, Late L3 23 kDa protein no no MGSSEQELKAIVKDLGCGPYFLGTYDKRFPGFVSPHKLACAIVNTAGRETGGVHWMAFAWNPRSKTCYLFEPFGFSDQRL KQVYQFEYESLLRRSAIASSPDRCITLEKSTQSVQGPNSAACGLFCCMFLHAFANWPQTPMDHNPTMNLITGVPNSMLNS PQVQPTLRRNQEQLYSFLERHSPYFRSHSAQIRSATSFCHLKNM MGSSEQELKAIVKDLGCGPYFLGTYDKRFPGFVSPHKLACAIVNTAGRETGGVHWMAFAWNPRSKTCYLFEPFGFSDQRL KQVYQFEYESLLRRSAIASSPDRCITLEKSTQSVQGPNSAACGLFCCMFLHAFANWPQTPMDHNPTMNLITGVPNSMLNS PQVQPTLRRNQEQLYSFLERHSPYFRSHSAQIRSATSFCHLKNM A polypeptide(L) no no GVQSLKRRRCF GVQSLKRRRCF B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Mastadenovirus Human adenovirus C Escherichia Escherichia coli sample L3-23k 10515 Human adenovirus 2 511693 Escherichia coli BL21 BL21 plasmid pET13 1 3.73 67.03 VAPOR DIFFUSION, HANGING DROP 6.5 cacodylate, sodium acetate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K 298 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations Refinement description 1 0 2003-08-26 1 1 2008-04-29 1 2 2011-07-13 1 3 2023-08-16 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id the same complex at high resolution RCSB Y RCSB 2003-01-07 REL REL ACY ACETIC ACID HOH water chemically synthesized C-terminal 11 amino acids from human adenovirus serotype 2 pVI molecule sample 1AVP PDB Entry 1AVP PDB experimental model ACY 600 3 ACY ACY 600 A HOH 1000 4 HOH HOH 1000 A HOH 1002 4 HOH HOH 1002 A HOH 1003 4 HOH HOH 1003 A HOH 1004 4 HOH HOH 1004 A HOH 1005 4 HOH HOH 1005 A HOH 1006 4 HOH HOH 1006 A HOH 1007 4 HOH HOH 1007 A HOH 1008 4 HOH HOH 1008 A HOH 1009 4 HOH HOH 1009 A HOH 1010 4 HOH HOH 1010 A HOH 1011 4 HOH HOH 1011 A HOH 1012 4 HOH HOH 1012 A HOH 1013 4 HOH HOH 1013 A HOH 1014 4 HOH HOH 1014 A HOH 1015 4 HOH HOH 1015 A HOH 1016 4 HOH HOH 1016 A HOH 1017 4 HOH HOH 1017 A HOH 1018 4 HOH HOH 1018 A HOH 1019 4 HOH HOH 1019 A HOH 1020 4 HOH HOH 1020 A HOH 1021 4 HOH HOH 1021 A HOH 1022 4 HOH HOH 1022 A HOH 1023 4 HOH HOH 1023 A HOH 1024 4 HOH HOH 1024 A HOH 1025 4 HOH HOH 1025 A HOH 1026 4 HOH HOH 1026 A HOH 1027 4 HOH HOH 1027 A HOH 1028 4 HOH HOH 1028 A HOH 1029 4 HOH HOH 1029 A HOH 1030 4 HOH HOH 1030 A HOH 1031 4 HOH HOH 1031 A HOH 1032 4 HOH HOH 1032 A HOH 1033 4 HOH HOH 1033 A HOH 1034 4 HOH HOH 1034 A HOH 1035 4 HOH HOH 1035 A HOH 1036 4 HOH HOH 1036 A HOH 1037 4 HOH HOH 1037 A HOH 1038 4 HOH HOH 1038 A HOH 1039 4 HOH HOH 1039 A HOH 1040 4 HOH HOH 1040 A HOH 1041 4 HOH HOH 1041 A HOH 1043 4 HOH HOH 1043 A HOH 1044 4 HOH HOH 1044 A HOH 1045 4 HOH HOH 1045 A HOH 1046 4 HOH HOH 1046 A HOH 1048 4 HOH HOH 1048 A HOH 1049 4 HOH HOH 1049 A HOH 1050 4 HOH HOH 1050 A HOH 1051 4 HOH HOH 1051 A HOH 1052 4 HOH HOH 1052 A HOH 1054 4 HOH HOH 1054 A HOH 1055 4 HOH HOH 1055 A HOH 1056 4 HOH HOH 1056 A HOH 1057 4 HOH HOH 1057 A HOH 1058 4 HOH HOH 1058 A HOH 1059 4 HOH HOH 1059 A HOH 1060 4 HOH HOH 1060 A HOH 1061 4 HOH HOH 1061 A HOH 1062 4 HOH HOH 1062 A HOH 1063 4 HOH HOH 1063 A HOH 1064 4 HOH HOH 1064 A HOH 1065 4 HOH HOH 1065 A HOH 1066 4 HOH HOH 1066 A HOH 1067 4 HOH HOH 1067 A HOH 1068 4 HOH HOH 1068 A HOH 1069 4 HOH HOH 1069 A HOH 1070 4 HOH HOH 1070 A HOH 1071 4 HOH HOH 1071 A HOH 1073 4 HOH HOH 1073 A HOH 1074 4 HOH HOH 1074 A HOH 1075 4 HOH HOH 1075 A HOH 1076 4 HOH HOH 1076 A HOH 1077 4 HOH HOH 1077 A HOH 1078 4 HOH HOH 1078 A HOH 1079 4 HOH HOH 1079 A HOH 1080 4 HOH HOH 1080 A HOH 1081 4 HOH HOH 1081 A HOH 1082 4 HOH HOH 1082 A HOH 1083 4 HOH HOH 1083 A HOH 1084 4 HOH HOH 1084 A HOH 1085 4 HOH HOH 1085 A HOH 1086 4 HOH HOH 1086 A HOH 1087 4 HOH HOH 1087 A HOH 1088 4 HOH HOH 1088 A HOH 1089 4 HOH HOH 1089 A HOH 1090 4 HOH HOH 1090 A HOH 1091 4 HOH HOH 1091 A HOH 1092 4 HOH HOH 1092 A HOH 1093 4 HOH HOH 1093 A HOH 1094 4 HOH HOH 1094 A HOH 1096 4 HOH HOH 1096 A HOH 1097 4 HOH HOH 1097 A HOH 1098 4 HOH HOH 1098 A HOH 1099 4 HOH HOH 1099 A HOH 1100 4 HOH HOH 1100 A HOH 1101 4 HOH HOH 1101 A HOH 1102 4 HOH HOH 1102 A HOH 1103 4 HOH HOH 1103 A HOH 1104 4 HOH HOH 1104 A HOH 1106 4 HOH HOH 1106 A HOH 1107 4 HOH HOH 1107 A HOH 1108 4 HOH HOH 1108 A HOH 1109 4 HOH HOH 1109 A HOH 1110 4 HOH HOH 1110 A HOH 1111 4 HOH HOH 1111 A HOH 1112 4 HOH HOH 1112 A HOH 1113 4 HOH HOH 1113 A HOH 1114 4 HOH HOH 1114 A HOH 1115 4 HOH HOH 1115 A HOH 1116 4 HOH HOH 1116 A HOH 1117 4 HOH HOH 1117 A HOH 1118 4 HOH HOH 1118 A HOH 1119 4 HOH HOH 1119 A HOH 1120 4 HOH HOH 1120 A HOH 1121 4 HOH HOH 1121 A HOH 1122 4 HOH HOH 1122 A HOH 1123 4 HOH HOH 1123 A HOH 1124 4 HOH HOH 1124 A HOH 1125 4 HOH HOH 1125 A HOH 1126 4 HOH HOH 1126 A HOH 1127 4 HOH HOH 1127 A HOH 1128 4 HOH HOH 1128 A HOH 1129 4 HOH HOH 1129 A HOH 1130 4 HOH HOH 1130 A HOH 1132 4 HOH HOH 1132 A HOH 1133 4 HOH HOH 1133 A HOH 1134 4 HOH HOH 1134 A HOH 1136 4 HOH HOH 1136 A HOH 1137 4 HOH HOH 1137 A HOH 1138 4 HOH HOH 1138 A HOH 1139 4 HOH HOH 1139 A HOH 1140 4 HOH HOH 1140 A HOH 1141 4 HOH HOH 1141 A HOH 1142 4 HOH HOH 1142 A HOH 1143 4 HOH HOH 1143 A HOH 1144 4 HOH HOH 1144 A HOH 1145 4 HOH HOH 1145 A HOH 1146 4 HOH HOH 1146 A HOH 1147 4 HOH HOH 1147 A HOH 1148 4 HOH HOH 1148 A HOH 1149 4 HOH HOH 1149 A HOH 1150 4 HOH HOH 1150 A HOH 1151 4 HOH HOH 1151 A HOH 1152 4 HOH HOH 1152 A HOH 1153 4 HOH HOH 1153 A HOH 1154 4 HOH HOH 1154 A HOH 1155 4 HOH HOH 1155 A HOH 1156 4 HOH HOH 1156 A HOH 1157 4 HOH HOH 1157 A HOH 1158 4 HOH HOH 1158 A HOH 1160 4 HOH HOH 1160 A HOH 1161 4 HOH HOH 1161 A HOH 1162 4 HOH HOH 1162 A HOH 1165 4 HOH HOH 1165 A HOH 1166 4 HOH HOH 1166 A HOH 1167 4 HOH HOH 1167 A HOH 1169 4 HOH HOH 1169 A HOH 1170 4 HOH HOH 1170 A HOH 1171 4 HOH HOH 1171 A HOH 1172 4 HOH HOH 1172 A HOH 1173 4 HOH HOH 1173 A HOH 1174 4 HOH HOH 1174 A HOH 1175 4 HOH HOH 1175 A HOH 1176 4 HOH HOH 1176 A HOH 1177 4 HOH HOH 1177 A HOH 1178 4 HOH HOH 1178 A HOH 1179 4 HOH HOH 1179 A HOH 1181 4 HOH HOH 1181 A HOH 1182 4 HOH HOH 1182 A HOH 1183 4 HOH HOH 1183 A HOH 1184 4 HOH HOH 1184 A HOH 1185 4 HOH HOH 1185 A HOH 1186 4 HOH HOH 1186 A HOH 1187 4 HOH HOH 1187 A HOH 1188 4 HOH HOH 1188 A HOH 1189 4 HOH HOH 1189 A HOH 1190 4 HOH HOH 1190 A HOH 1191 4 HOH HOH 1191 A HOH 1194 4 HOH HOH 1194 A HOH 1196 4 HOH HOH 1196 A HOH 1197 4 HOH HOH 1197 A HOH 1198 4 HOH HOH 1198 A HOH 1200 4 HOH HOH 1200 A HOH 1201 4 HOH HOH 1201 A HOH 1202 4 HOH HOH 1202 A HOH 1204 4 HOH HOH 1204 A HOH 1205 4 HOH HOH 1205 A HOH 1207 4 HOH HOH 1207 A HOH 1208 4 HOH HOH 1208 A HOH 1209 4 HOH HOH 1209 A HOH 1210 4 HOH HOH 1210 A HOH 1212 4 HOH HOH 1212 A HOH 1213 4 HOH HOH 1213 A HOH 1214 4 HOH HOH 1214 A HOH 1215 4 HOH HOH 1215 A HOH 1216 4 HOH HOH 1216 A HOH 1218 4 HOH HOH 1218 A HOH 1221 4 HOH HOH 1221 A HOH 1222 4 HOH HOH 1222 A HOH 1223 4 HOH HOH 1223 A HOH 1224 4 HOH HOH 1224 A HOH 1225 4 HOH HOH 1225 A HOH 1226 4 HOH HOH 1226 A HOH 1227 4 HOH HOH 1227 A HOH 1229 4 HOH HOH 1229 A HOH 1230 4 HOH HOH 1230 A HOH 1232 4 HOH HOH 1232 A HOH 1234 4 HOH HOH 1234 A HOH 1235 4 HOH HOH 1235 A HOH 1236 4 HOH HOH 1236 A HOH 1238 4 HOH HOH 1238 A HOH 1239 4 HOH HOH 1239 A HOH 1240 4 HOH HOH 1240 A HOH 1241 4 HOH HOH 1241 A HOH 1242 4 HOH HOH 1242 A HOH 1245 4 HOH HOH 1245 A HOH 1246 4 HOH HOH 1246 A HOH 1247 4 HOH HOH 1247 A HOH 1248 4 HOH HOH 1248 A HOH 1001 4 HOH HOH 1001 B HOH 1042 4 HOH HOH 1042 B HOH 1047 4 HOH HOH 1047 B HOH 1053 4 HOH HOH 1053 B HOH 1072 4 HOH HOH 1072 B HOH 1095 4 HOH HOH 1095 B HOH 1105 4 HOH HOH 1105 B HOH 1131 4 HOH HOH 1131 B HOH 1135 4 HOH HOH 1135 B HOH 1159 4 HOH HOH 1159 B HOH 1163 4 HOH HOH 1163 B HOH 1164 4 HOH HOH 1164 B HOH 1168 4 HOH HOH 1168 B HOH 1180 4 HOH HOH 1180 B HOH 1199 4 HOH HOH 1199 B HOH 1217 4 HOH HOH 1217 B HOH 1219 4 HOH HOH 1219 B HOH 1220 4 HOH HOH 1220 B HOH 1233 4 HOH HOH 1233 B n 1 1 A GLY 2 n 2 GLY 2 A SER 3 n 3 SER 3 A SER 4 n 4 SER 4 A GLU 5 n 5 GLU 5 A GLN 6 n 6 GLN 6 A GLU 7 n 7 GLU 7 A LEU 8 n 8 LEU 8 A LYS 9 n 9 LYS 9 A ALA 10 n 10 ALA 10 A ILE 11 n 11 ILE 11 A VAL 12 n 12 VAL 12 A LYS 13 n 13 LYS 13 A ASP 14 n 14 ASP 14 A LEU 15 n 15 LEU 15 A GLY 16 n 16 GLY 16 A CYS 17 n 17 CYS 17 A GLY 18 n 18 GLY 18 A PRO 19 n 19 PRO 19 A TYR 20 n 20 TYR 20 A PHE 21 n 21 PHE 21 A LEU 22 n 22 LEU 22 A GLY 23 n 23 GLY 23 A THR 24 n 24 THR 24 A TYR 25 n 25 TYR 25 A ASP 26 n 26 ASP 26 A LYS 27 n 27 LYS 27 A ARG 28 n 28 ARG 28 A PHE 29 n 29 PHE 29 A PRO 30 n 30 PRO 30 A GLY 31 n 31 GLY 31 A PHE 32 n 32 PHE 32 A VAL 33 n 33 VAL 33 A SER 34 n 34 SER 34 A PRO 35 n 35 PRO 35 A HIS 36 n 36 HIS 36 A LYS 37 n 37 LYS 37 A LEU 38 n 38 LEU 38 A ALA 39 n 39 ALA 39 A CYS 40 n 40 CYS 40 A ALA 41 n 41 ALA 41 A ILE 42 n 42 ILE 42 A VAL 43 n 43 VAL 43 A ASN 44 n 44 ASN 44 A THR 45 n 45 THR 45 A ALA 46 n 46 ALA 46 A GLY 47 n 47 GLY 47 A ARG 48 n 48 ARG 48 A GLU 49 n 49 GLU 49 A THR 50 n 50 THR 50 A GLY 51 n 51 GLY 51 A GLY 52 n 52 GLY 52 A VAL 53 n 53 VAL 53 A HIS 54 n 54 HIS 54 A TRP 55 n 55 TRP 55 A MET 56 n 56 MET 56 A ALA 57 n 57 ALA 57 A PHE 58 n 58 PHE 58 A ALA 59 n 59 ALA 59 A TRP 60 n 60 TRP 60 A ASN 61 n 61 ASN 61 A PRO 62 n 62 PRO 62 A ARG 63 n 63 ARG 63 A SER 64 n 64 SER 64 A LYS 65 n 65 LYS 65 A THR 66 n 66 THR 66 A CYS 67 n 67 CYS 67 A TYR 68 n 68 TYR 68 A LEU 69 n 69 LEU 69 A PHE 70 n 70 PHE 70 A GLU 71 n 71 GLU 71 A PRO 72 n 72 PRO 72 A PHE 73 n 73 PHE 73 A GLY 74 n 74 GLY 74 A PHE 75 n 75 PHE 75 A SER 76 n 76 SER 76 A ASP 77 n 77 ASP 77 A GLN 78 n 78 GLN 78 A ARG 79 n 79 ARG 79 A LEU 80 n 80 LEU 80 A LYS 81 n 81 LYS 81 A GLN 82 n 82 GLN 82 A VAL 83 n 83 VAL 83 A TYR 84 n 84 TYR 84 A GLN 85 n 85 GLN 85 A PHE 86 n 86 PHE 86 A GLU 87 n 87 GLU 87 A TYR 88 n 88 TYR 88 A GLU 89 n 89 GLU 89 A SER 90 n 90 SER 90 A LEU 91 n 91 LEU 91 A LEU 92 n 92 LEU 92 A ARG 93 n 93 ARG 93 A ARG 94 n 94 ARG 94 A SER 95 n 95 SER 95 A ALA 96 n 96 ALA 96 A ILE 97 n 97 ILE 97 A ALA 98 n 98 ALA 98 A SER 99 n 99 SER 99 A SER 100 n 100 SER 100 A PRO 101 n 101 PRO 101 A ASP 102 n 102 ASP 102 A ARG 103 n 103 ARG 103 A CYS 104 n 104 CYS 104 A ILE 105 n 105 ILE 105 A THR 106 n 106 THR 106 A LEU 107 n 107 LEU 107 A GLU 108 n 108 GLU 108 A LYS 109 n 109 LYS 109 A SER 110 n 110 SER 110 A THR 111 n 111 THR 111 A GLN 112 n 112 GLN 112 A SER 113 n 113 SER 113 A VAL 114 n 114 VAL 114 A GLN 115 n 115 GLN 115 A GLY 116 n 116 GLY 116 A PRO 117 n 117 PRO 117 A ASN 118 n 118 ASN 118 A SER 119 n 119 SER 119 A ALA 120 n 120 ALA 120 A ALA 121 n 121 ALA 121 A CYS 122 n 122 CYS 122 A GLY 123 n 123 GLY 123 A LEU 124 n 124 LEU 124 A PHE 125 n 125 PHE 125 A CYS 126 n 126 CYS 126 A CYS 127 n 127 CYS 127 A MET 128 n 128 MET 128 A PHE 129 n 129 PHE 129 A LEU 130 n 130 LEU 130 A HIS 131 n 131 HIS 131 A ALA 132 n 132 ALA 132 A PHE 133 n 133 PHE 133 A ALA 134 n 134 ALA 134 A ASN 135 n 135 ASN 135 A TRP 136 n 136 TRP 136 A PRO 137 n 137 PRO 137 A GLN 138 n 138 GLN 138 A THR 139 n 139 THR 139 A PRO 140 n 140 PRO 140 A MET 141 n 141 MET 141 A ASP 142 n 142 ASP 142 A HIS 143 n 143 HIS 143 A ASN 144 n 144 ASN 144 A PRO 145 n 145 PRO 145 A THR 146 n 146 THR 146 A MET 147 n 147 MET 147 A ASN 148 n 148 ASN 148 A LEU 149 n 149 LEU 149 A ILE 150 n 150 ILE 150 A THR 151 n 151 THR 151 A GLY 152 n 152 GLY 152 A VAL 153 n 153 VAL 153 A PRO 154 n 154 PRO 154 A ASN 155 n 155 ASN 155 A SER 156 n 156 SER 156 A MET 157 n 157 MET 157 A LEU 158 n 158 LEU 158 A ASN 159 n 159 ASN 159 A SER 160 n 160 SER 160 A PRO 161 n 161 PRO 161 A GLN 162 n 162 GLN 162 A VAL 163 n 163 VAL 163 A GLN 164 n 164 GLN 164 A PRO 165 n 165 PRO 165 A THR 166 n 166 THR 166 A LEU 167 n 167 LEU 167 A ARG 168 n 168 ARG 168 A ARG 169 n 169 ARG 169 A ASN 170 n 170 ASN 170 A GLN 171 n 171 GLN 171 A GLU 172 n 172 GLU 172 A GLN 173 n 173 GLN 173 A LEU 174 n 174 LEU 174 A TYR 175 n 175 TYR 175 A SER 176 n 176 SER 176 A PHE 177 n 177 PHE 177 A LEU 178 n 178 LEU 178 A GLU 179 n 179 GLU 179 A ARG 180 n 180 ARG 180 A HIS 181 n 181 HIS 181 A SER 182 n 182 SER 182 A PRO 183 n 183 PRO 183 A TYR 184 n 184 TYR 184 A PHE 185 n 185 PHE 185 A ARG 186 n 186 ARG 186 A SER 187 n 187 SER 187 A HIS 188 n 188 HIS 188 A SER 189 n 189 SER 189 A ALA 190 n 190 ALA 190 A GLN 191 n 191 GLN 191 A ILE 192 n 192 ILE 192 A ARG 193 n 193 ARG 193 A SER 194 n 194 SER 194 A ALA 195 n 195 ALA 195 A THR 196 n 196 THR 196 A SER 197 n 197 SER 197 A PHE 198 n 198 PHE 198 A CYS 199 n 199 CYS 199 A HIS 200 n 200 HIS 200 A LEU 201 n 201 LEU 201 A LYS 202 n 202 LYS 202 A ASN 203 n 203 ASN 203 A MET 204 n 204 MET 204 A GLY 300 n 1 GLY 300 B VAL 301 n 2 VAL 301 B GLN 302 n 3 GLN 302 B SER 303 n 4 SER 303 B LEU 304 n 5 LEU 304 B LYS 305 n 6 LYS 305 B ARG 306 n 7 ARG 306 B ARG 307 n 8 ARG 307 B ARG 308 n 9 ARG 308 B CYS 309 n 10 CYS 309 B PHE 310 n 11 PHE 310 B author_and_software_defined_assembly PISA 2 dimeric 1670 -4 9740 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N TYR 25 A N TYR 25 A O ASN 44 A O ASN 44 A N VAL 43 A N VAL 43 A O MET 56 A O MET 56 A N ALA 57 A N ALA 57 A O PHE 70 A O PHE 70 A N CYS 67 A N CYS 67 A O THR 106 A O THR 106 A N LEU 107 A N LEU 107 B O ARG 306 B O ARG 7 A N SER 113 A N SER 113 A O VAL 153 A O VAL 153 1 A MET 1 A MET 1 1 Y 1 A ARG 28 0.123 SIDE CHAIN 1 A ARG 93 0.090 SIDE CHAIN 1 A ARG 94 0.116 SIDE CHAIN 1 A ARG 169 0.150 SIDE CHAIN 1 B ARG 306 0.175 SIDE CHAIN 1 B ARG 307 0.209 SIDE CHAIN 1 10.49 1.70 113.30 123.79 A A A CA CB CG MET MET MET 56 56 56 N 1 -21.75 2.60 111.60 89.85 A A A CB CG CD LYS LYS LYS 81 81 81 B B N 1 -14.04 2.30 111.70 97.66 A A A CD CE NZ LYS LYS LYS 81 81 81 B B B N 1 9.44 1.40 123.60 133.04 A A A CD NE CZ ARG ARG ARG 93 93 93 N 1 16.15 1.40 123.60 139.75 A A A CD NE CZ ARG ARG ARG 169 169 169 N 1 -6.80 1.10 119.40 112.60 A A A NH1 CZ NH2 ARG ARG ARG 169 169 169 N 1 5.37 0.50 120.30 125.67 A A A NE CZ NH1 ARG ARG ARG 169 169 169 N 1 A A CD CE LYS LYS 81 81 0.460 0.025 1.508 1.968 B B N 1 A A CE NZ LYS LYS 81 81 0.605 0.025 1.486 2.091 B B N 1 A A CB OG SER SER 113 113 0.166 0.013 1.418 1.584 B B N 1 A A CA CB SER SER 176 176 0.100 0.015 1.525 1.625 B N 1 A A CB SG CYS CYS 199 199 -0.112 0.016 1.812 1.700 N 1 A A O O HOH HOH 1204 1205 2.08 1_555 2_664 1 A VAL 33 -118.19 79.17 1 A SER 34 -157.84 66.48 1 A VAL 53 -126.36 -54.15 1 A THR 139 -148.83 54.11 14.1 0.179 0.136 1.6 30 4380 44447 92.5 random 1 isotropic THROUGHOUT 2 2 MOLECULAR REPLACEMENT PDB Entry 1AVP Engh & Huber 0.15 0.1 1.6 30 242 1957 0 0 1715 0.019 2.1 16.3 1.6 30 1NLN 44449 2.0 2.0 0.045 0.045 1 30.6 11 92.5 0.166 1.6 50 7.7 3674 0.154 5.4 77.1 data reduction DENZO data scaling SCALEPACK model building X-PLOR refinement X-PLOR phasing X-PLOR CRYSTAL STRUCTURE OF HUMAN ADENOVIRUS 2 PROTEINASE WITH ITS 11 AMINO ACID COFACTOR AT 1.6 ANGSTROM RESOLUTION 1 N N 2 N N 3 N N 4 N N 4 N N A SER 4 A SER 4 HELX_P A LEU 15 A LEU 15 1 1 12 A CYS 17 A CYS 17 HELX_P A PRO 19 A PRO 19 5 2 3 A SER 76 A SER 76 HELX_P A GLN 85 A GLN 85 1 3 10 A TYR 88 A TYR 88 HELX_P A SER 100 A SER 100 1 4 13 A ALA 121 A ALA 121 HELX_P A TRP 136 A TRP 136 1 5 16 A THR 146 A THR 146 HELX_P A ILE 150 A ILE 150 5 6 5 A SER 156 A SER 156 HELX_P A LEU 158 A LEU 158 5 7 3 A SER 160 A SER 160 HELX_P A GLN 162 A GLN 162 5 8 3 A VAL 163 A VAL 163 HELX_P A SER 182 A SER 182 1 9 20 A SER 182 A SER 182 HELX_P A HIS 188 A HIS 188 1 10 7 A HIS 188 A HIS 188 HELX_P A SER 197 A SER 197 1 11 10 disulf 2.107 A CYS 104 A SG CYS 104 1_555 B CYS 309 B SG CYS 10 1_555 HYDROLASE THIOL HYDROLASE, VIRAL PROTEINASE, PEPTIDE COFACTOR, HYDROLASE ADEN_ADE02 UNP 1 1 P03252 MGSSEQELKAIVKDLGCGPYFLGTYDKRFPGFVSPHKLACAIVNTAGRETGGVHWMAFAWNPRSKTCYLFEPFGFSDQRL KQVYQFEYESLLRRSAIASSPDRCITLEKSTQSVQGPNSAACGLFCCMFLHAFANWPQTPMDHNPTMNLITGVPNSMLNS PQVQPTLRRNQEQLYSFLERHSPYFRSHSAQIRSATSFCHLKNM 1NLN PDB 2 1NLN 1 204 1NLN 1 204 P03252 A 1 1 204 300 310 1NLN 300 310 1NLN B 2 1 11 6 2 parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel A PHE 21 A PHE 21 A TYR 25 A TYR 25 A ALA 39 A ALA 39 A ASN 44 A ASN 44 A TRP 55 A TRP 55 A ASN 61 A ASN 61 A THR 66 A THR 66 A PHE 70 A PHE 70 A CYS 104 A CYS 104 A SER 110 A SER 110 B SER 303 B SER 4 B CYS 309 B CYS 10 A GLN 112 A GLN 112 A SER 113 A SER 113 A VAL 153 A VAL 153 A PRO 154 A PRO 154 BINDING SITE FOR RESIDUE ACY A 600 A ACY 600 Software 6 A THR 146 A THR 146 6 1_555 A MET 157 A MET 157 6 3_564 A GLN 162 A GLN 162 6 3_564 A ARG 180 A ARG 180 6 1_555 A HIS 181 A HIS 181 6 1_555 A HOH 1017 D HOH 6 3_565 169 P 61