0.018174 0.010493 0.000000 0.000000 0.020985 0.000000 0.000000 0.000000 0.006178 0.00000 0.00000 0.00000 Li, J. Sha, B. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90 90 120 55.025 55.025 161.870 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer UK Structure STRUE6 2005 0969-2126 11 1475 1483 10.1016/j.str.2003.10.012 14656432 The crystal structure of the yeast Hsp40 Ydj1 complexed with its peptide substrate. 2003 10.2210/pdb1nlt/pdb pdb_00001nlt 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 1 CCD 2002-07-20 ADSC QUANTUM 4 CCD 2002-08-30 ADSC QUANTUM 4 sagitally focused Si MAD M x-ray 1 MAD M x-ray 1 1.2828 1.0 1.2894 1.0 1.244 1.0 1.3237 1.0 F2 CHESS 1.2828,1.2894, 1.244, 1.3237 SYNCHROTRON CHESS BEAMLINE F2 14-BM-D APS 1.2828,1.2894, 1.244, 1.3237 SYNCHROTRON APS BEAMLINE 14-BM-D 27388.627 Mitochondrial protein import protein MAS5 C terminal domain no 1 man polymer 866.958 Seven residue peptide 1 syn polymer 65.409 ZINC ION 2 syn non-polymer 18.015 water 147 nat water Protein YDJ1 no no GAQRPRGPQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGPMIQRFQ TECDVCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRD GDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPENHFTS EENLKKLE GAQRPRGPQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGPMIQRFQ TECDVCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRD GDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPENHFTS EENLKKLE A polypeptide(L) no no GWLYEIS GWLYEIS B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n baker's yeast Saccharomyces Escherichia Escherichia coli sample MAS5 OR YDJ1 OR YNL064C OR N2418 OR YNL2418C 4932 Saccharomyces cerevisiae 469008 Escherichia coli BL21(DE3) BL21(DE3) pET28b pET28b 2 2.57 51.82 VAPOR DIFFUSION, HANGING DROP 7.0 PEG 4K, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 300K 300 database_2 pdbx_struct_conn_angle struct_conn struct_ref_seq_dif struct_site repository Initial release Version format compliance Version format compliance Database references Derived calculations 1 0 2004-01-13 1 1 2007-10-16 1 2 2011-07-13 1 3 2021-10-27 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_seq_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2003-01-07 REL REL ZN ZINC ION HOH water Chemically synthesized sample ZN2 350 3 ZN ZN 351 A ZN2 351 3 ZN ZN 352 A TIP 1 4 HOH HOH 353 A TIP 2 4 HOH HOH 354 A TIP 3 4 HOH HOH 355 A TIP 4 4 HOH HOH 356 A TIP 5 4 HOH HOH 357 A TIP 6 4 HOH HOH 358 A TIP 7 4 HOH HOH 359 A TIP 8 4 HOH HOH 360 A TIP 9 4 HOH HOH 361 A TIP 10 4 HOH HOH 362 A TIP 11 4 HOH HOH 363 A TIP 12 4 HOH HOH 364 A TIP 13 4 HOH HOH 365 A TIP 14 4 HOH HOH 366 A TIP 15 4 HOH HOH 367 A TIP 16 4 HOH HOH 368 A TIP 17 4 HOH HOH 369 A TIP 18 4 HOH HOH 370 A TIP 19 4 HOH HOH 371 A TIP 20 4 HOH HOH 372 A TIP 21 4 HOH HOH 373 A TIP 22 4 HOH HOH 374 A TIP 23 4 HOH HOH 375 A TIP 24 4 HOH HOH 376 A TIP 25 4 HOH HOH 377 A TIP 26 4 HOH HOH 378 A TIP 27 4 HOH HOH 379 A TIP 28 4 HOH HOH 380 A TIP 29 4 HOH HOH 381 A TIP 30 4 HOH HOH 382 A TIP 31 4 HOH HOH 383 A TIP 32 4 HOH HOH 384 A TIP 33 4 HOH HOH 385 A TIP 34 4 HOH HOH 386 A TIP 35 4 HOH HOH 387 A TIP 36 4 HOH HOH 388 A TIP 37 4 HOH HOH 389 A TIP 38 4 HOH HOH 390 A TIP 39 4 HOH HOH 391 A TIP 40 4 HOH HOH 392 A TIP 41 4 HOH HOH 393 A TIP 42 4 HOH HOH 394 A TIP 44 4 HOH HOH 395 A TIP 46 4 HOH HOH 396 A TIP 47 4 HOH HOH 397 A TIP 48 4 HOH HOH 398 A TIP 49 4 HOH HOH 399 A TIP 50 4 HOH HOH 400 A TIP 51 4 HOH HOH 401 A TIP 52 4 HOH HOH 402 A TIP 53 4 HOH HOH 403 A TIP 54 4 HOH HOH 404 A TIP 55 4 HOH HOH 405 A TIP 56 4 HOH HOH 406 A TIP 57 4 HOH HOH 407 A TIP 58 4 HOH HOH 408 A TIP 59 4 HOH HOH 409 A TIP 60 4 HOH HOH 410 A TIP 61 4 HOH HOH 411 A TIP 62 4 HOH HOH 412 A TIP 63 4 HOH HOH 413 A TIP 64 4 HOH HOH 414 A TIP 65 4 HOH HOH 415 A TIP 66 4 HOH HOH 416 A TIP 67 4 HOH HOH 417 A TIP 68 4 HOH HOH 418 A TIP 70 4 HOH HOH 419 A TIP 71 4 HOH HOH 420 A TIP 72 4 HOH HOH 421 A TIP 73 4 HOH HOH 422 A TIP 74 4 HOH HOH 423 A TIP 75 4 HOH HOH 424 A TIP 76 4 HOH HOH 425 A TIP 77 4 HOH HOH 426 A TIP 78 4 HOH HOH 427 A TIP 79 4 HOH HOH 428 A TIP 80 4 HOH HOH 429 A TIP 81 4 HOH HOH 430 A TIP 82 4 HOH HOH 431 A TIP 83 4 HOH HOH 432 A TIP 84 4 HOH HOH 433 A TIP 85 4 HOH HOH 434 A TIP 86 4 HOH HOH 435 A TIP 87 4 HOH HOH 436 A TIP 88 4 HOH HOH 437 A TIP 89 4 HOH HOH 438 A TIP 90 4 HOH HOH 439 A TIP 91 4 HOH HOH 440 A TIP 92 4 HOH HOH 441 A TIP 93 4 HOH HOH 442 A TIP 94 4 HOH HOH 443 A TIP 95 4 HOH HOH 444 A TIP 96 4 HOH HOH 445 A TIP 97 4 HOH HOH 446 A TIP 98 4 HOH HOH 447 A TIP 99 4 HOH HOH 448 A TIP 100 4 HOH HOH 449 A TIP 102 4 HOH HOH 450 A TIP 103 4 HOH HOH 451 A TIP 104 4 HOH HOH 452 A TIP 105 4 HOH HOH 453 A TIP 106 4 HOH HOH 454 A TIP 107 4 HOH HOH 455 A TIP 108 4 HOH HOH 456 A TIP 109 4 HOH HOH 457 A TIP 110 4 HOH HOH 458 A TIP 112 4 HOH HOH 459 A TIP 113 4 HOH HOH 460 A TIP 114 4 HOH HOH 461 A TIP 115 4 HOH HOH 462 A TIP 116 4 HOH HOH 463 A TIP 117 4 HOH HOH 464 A TIP 118 4 HOH HOH 465 A TIP 119 4 HOH HOH 466 A TIP 120 4 HOH HOH 467 A TIP 121 4 HOH HOH 468 A TIP 122 4 HOH HOH 469 A TIP 123 4 HOH HOH 470 A TIP 124 4 HOH HOH 471 A TIP 125 4 HOH HOH 472 A TIP 126 4 HOH HOH 473 A TIP 127 4 HOH HOH 474 A TIP 128 4 HOH HOH 475 A TIP 129 4 HOH HOH 476 A TIP 130 4 HOH HOH 477 A TIP 131 4 HOH HOH 478 A TIP 132 4 HOH HOH 479 A TIP 133 4 HOH HOH 480 A TIP 134 4 HOH HOH 481 A TIP 135 4 HOH HOH 482 A TIP 136 4 HOH HOH 483 A TIP 137 4 HOH HOH 484 A TIP 138 4 HOH HOH 485 A TIP 139 4 HOH HOH 486 A TIP 140 4 HOH HOH 487 A TIP 141 4 HOH HOH 488 A TIP 142 4 HOH HOH 489 A TIP 143 4 HOH HOH 490 A TIP 144 4 HOH HOH 491 A TIP 145 4 HOH HOH 492 A TIP 146 4 HOH HOH 493 A TIP 147 4 HOH HOH 494 A TIP 43 4 HOH HOH 43 B TIP 45 4 HOH HOH 45 B TIP 69 4 HOH HOH 69 B TIP 101 4 HOH HOH 101 B TIP 111 4 HOH HOH 111 B n 1 103 A n 2 104 A n 3 105 A n 4 106 A n 5 107 A n 6 108 A n 7 109 A PRO 110 n 8 PRO 110 A GLN 111 n 9 GLN 111 A ARG 112 n 10 ARG 112 A GLY 113 n 11 GLY 113 A LYS 114 n 12 LYS 114 A ASP 115 n 13 ASP 115 A ILE 116 n 14 ILE 116 A LYS 117 n 15 LYS 117 A HIS 118 n 16 HIS 118 A GLU 119 n 17 GLU 119 A ILE 120 n 18 ILE 120 A SER 121 n 19 SER 121 A ALA 122 n 20 ALA 122 A SER 123 n 21 SER 123 A LEU 124 n 22 LEU 124 A GLU 125 n 23 GLU 125 A GLU 126 n 24 GLU 126 A LEU 127 n 25 LEU 127 A TYR 128 n 26 TYR 128 A LYS 129 n 27 LYS 129 A GLY 130 n 28 GLY 130 A ARG 131 n 29 ARG 131 A THR 132 n 30 THR 132 A ALA 133 n 31 ALA 133 A LYS 134 n 32 LYS 134 A LEU 135 n 33 LEU 135 A ALA 136 n 34 ALA 136 A LEU 137 n 35 LEU 137 A ASN 138 n 36 ASN 138 A LYS 139 n 37 LYS 139 A GLN 140 n 38 GLN 140 A ILE 141 n 39 ILE 141 A LEU 142 n 40 LEU 142 A CYS 143 n 41 CYS 143 A LYS 144 n 42 LYS 144 A GLU 145 n 43 GLU 145 A CYS 146 n 44 CYS 146 A GLU 147 n 45 GLU 147 A GLY 148 n 46 GLY 148 A ARG 149 n 47 ARG 149 A GLY 150 n 48 GLY 150 A GLY 151 n 49 GLY 151 A LYS 152 n 50 LYS 152 A LYS 153 n 51 LYS 153 A GLY 154 n 52 GLY 154 A ALA 155 n 53 ALA 155 A VAL 156 n 54 VAL 156 A LYS 157 n 55 LYS 157 A LYS 158 n 56 LYS 158 A CYS 159 n 57 CYS 159 A THR 160 n 58 THR 160 A SER 161 n 59 SER 161 A CYS 162 n 60 CYS 162 A ASN 163 n 61 ASN 163 A GLY 164 n 62 GLY 164 A GLN 165 n 63 GLN 165 A GLY 166 n 64 GLY 166 A ILE 167 n 65 ILE 167 A LYS 168 n 66 LYS 168 A PHE 169 n 67 PHE 169 A VAL 170 n 68 VAL 170 A THR 171 n 69 THR 171 A ARG 172 n 70 ARG 172 A GLN 173 n 71 GLN 173 A MET 174 n 72 MET 174 A GLY 175 n 73 GLY 175 A PRO 176 n 74 PRO 176 A MET 177 n 75 MET 177 A ILE 178 n 76 ILE 178 A GLN 179 n 77 GLN 179 A ARG 180 n 78 ARG 180 A PHE 181 n 79 PHE 181 A GLN 182 n 80 GLN 182 A THR 183 n 81 THR 183 A GLU 184 n 82 GLU 184 A CYS 185 n 83 CYS 185 A ASP 186 n 84 ASP 186 A VAL 187 n 85 VAL 187 A CYS 188 n 86 CYS 188 A HIS 189 n 87 HIS 189 A GLY 190 n 88 GLY 190 A THR 191 n 89 THR 191 A GLY 192 n 90 GLY 192 A ASP 193 n 91 ASP 193 A ILE 194 n 92 ILE 194 A ILE 195 n 93 ILE 195 A ASP 196 n 94 ASP 196 A PRO 197 n 95 PRO 197 A LYS 198 n 96 LYS 198 A ASP 199 n 97 ASP 199 A ARG 200 n 98 ARG 200 A CYS 201 n 99 CYS 201 A LYS 202 n 100 LYS 202 A SER 203 n 101 SER 203 A CYS 204 n 102 CYS 204 A ASN 205 n 103 ASN 205 A GLY 206 n 104 GLY 206 A LYS 207 n 105 LYS 207 A LYS 208 n 106 LYS 208 A VAL 209 n 107 VAL 209 A GLU 210 n 108 GLU 210 A ASN 211 n 109 ASN 211 A GLU 212 n 110 GLU 212 A ARG 213 n 111 ARG 213 A LYS 214 n 112 LYS 214 A ILE 215 n 113 ILE 215 A LEU 216 n 114 LEU 216 A GLU 217 n 115 GLU 217 A VAL 218 n 116 VAL 218 A HIS 219 n 117 HIS 219 A VAL 220 n 118 VAL 220 A GLU 221 n 119 GLU 221 A PRO 222 n 120 PRO 222 A GLY 223 n 121 GLY 223 A MET 224 n 122 MET 224 A LYS 225 n 123 LYS 225 A ASP 226 n 124 ASP 226 A GLY 227 n 125 GLY 227 A GLN 228 n 126 GLN 228 A ARG 229 n 127 ARG 229 A ILE 230 n 128 ILE 230 A VAL 231 n 129 VAL 231 A PHE 232 n 130 PHE 232 A LYS 233 n 131 LYS 233 A GLY 234 n 132 GLY 234 A GLU 235 n 133 GLU 235 A ALA 236 n 134 ALA 236 A ASP 237 n 135 ASP 237 A GLN 238 n 136 GLN 238 A ALA 239 n 137 ALA 239 A PRO 240 n 138 PRO 240 A ASP 241 n 139 ASP 241 A VAL 242 n 140 VAL 242 A ILE 243 n 141 ILE 243 A PRO 244 n 142 PRO 244 A GLY 245 n 143 GLY 245 A ASP 246 n 144 ASP 246 A VAL 247 n 145 VAL 247 A VAL 248 n 146 VAL 248 A PHE 249 n 147 PHE 249 A ILE 250 n 148 ILE 250 A VAL 251 n 149 VAL 251 A SER 252 n 150 SER 252 A GLU 253 n 151 GLU 253 A ARG 254 n 152 ARG 254 A PRO 255 n 153 PRO 255 A HIS 256 n 154 HIS 256 A LYS 257 n 155 LYS 257 A SER 258 n 156 SER 258 A PHE 259 n 157 PHE 259 A LYS 260 n 158 LYS 260 A ARG 261 n 159 ARG 261 A ASP 262 n 160 ASP 262 A GLY 263 n 161 GLY 263 A ASP 264 n 162 ASP 264 A ASP 265 n 163 ASP 265 A LEU 266 n 164 LEU 266 A VAL 267 n 165 VAL 267 A TYR 268 n 166 TYR 268 A GLU 269 n 167 GLU 269 A ALA 270 n 168 ALA 270 A GLU 271 n 169 GLU 271 A ILE 272 n 170 ILE 272 A ASP 273 n 171 ASP 273 A LEU 274 n 172 LEU 274 A LEU 275 n 173 LEU 275 A THR 276 n 174 THR 276 A ALA 277 n 175 ALA 277 A ILE 278 n 176 ILE 278 A ALA 279 n 177 ALA 279 A GLY 280 n 178 GLY 280 A GLY 281 n 179 GLY 281 A GLU 282 n 180 GLU 282 A PHE 283 n 181 PHE 283 A ALA 284 n 182 ALA 284 A LEU 285 n 183 LEU 285 A GLU 286 n 184 GLU 286 A HIS 287 n 185 HIS 287 A VAL 288 n 186 VAL 288 A SER 289 n 187 SER 289 A GLY 290 n 188 GLY 290 A ASP 291 n 189 ASP 291 A TRP 292 n 190 TRP 292 A LEU 293 n 191 LEU 293 A LYS 294 n 192 LYS 294 A VAL 295 n 193 VAL 295 A GLY 296 n 194 GLY 296 A ILE 297 n 195 ILE 297 A VAL 298 n 196 VAL 298 A PRO 299 n 197 PRO 299 A GLY 300 n 198 GLY 300 A GLU 301 n 199 GLU 301 A VAL 302 n 200 VAL 302 A ILE 303 n 201 ILE 303 A ALA 304 n 202 ALA 304 A PRO 305 n 203 PRO 305 A GLY 306 n 204 GLY 306 A MET 307 n 205 MET 307 A ARG 308 n 206 ARG 308 A LYS 309 n 207 LYS 309 A VAL 310 n 208 VAL 310 A ILE 311 n 209 ILE 311 A GLU 312 n 210 GLU 312 A GLY 313 n 211 GLY 313 A LYS 314 n 212 LYS 314 A GLY 315 n 213 GLY 315 A MET 316 n 214 MET 316 A PRO 317 n 215 PRO 317 A ILE 318 n 216 ILE 318 A PRO 319 n 217 PRO 319 A LYS 320 n 218 LYS 320 A TYR 321 n 219 TYR 321 A GLY 322 n 220 GLY 322 A GLY 323 n 221 GLY 323 A TYR 324 n 222 TYR 324 A GLY 325 n 223 GLY 325 A ASN 326 n 224 ASN 326 A LEU 327 n 225 LEU 327 A ILE 328 n 226 ILE 328 A ILE 329 n 227 ILE 329 A LYS 330 n 228 LYS 330 A PHE 331 n 229 PHE 331 A THR 332 n 230 THR 332 A ILE 333 n 231 ILE 333 A LYS 334 n 232 LYS 334 A ASP 335 n 233 ASP 335 A PRO 336 n 234 PRO 336 A GLU 337 n 235 GLU 337 A n 236 338 A n 237 339 A n 238 340 A n 239 341 A n 240 342 A n 241 343 A n 242 344 A n 243 345 A n 244 346 A n 245 347 A n 246 348 A n 247 349 A n 248 350 A GLY 1 n 1 GLY 1 B TRP 2 n 2 TRP 2 B LEU 3 n 3 LEU 3 B TYR 4 n 4 TYR 4 B GLU 5 n 5 GLU 5 B ILE 6 n 6 ILE 6 B SER 7 n 7 SER 7 B author_defined_assembly 2 dimeric A CYS 143 A SG CYS 41 1_555 A ZN 351 C ZN ZN 1_555 A CYS 146 A SG CYS 44 1_555 115.3 A CYS 143 A SG CYS 41 1_555 A ZN 351 C ZN ZN 1_555 A CYS 201 A SG CYS 99 1_555 111.4 A CYS 146 A SG CYS 44 1_555 A ZN 351 C ZN ZN 1_555 A CYS 201 A SG CYS 99 1_555 97.8 A CYS 143 A SG CYS 41 1_555 A ZN 351 C ZN ZN 1_555 A CYS 204 A SG CYS 102 1_555 119.0 A CYS 146 A SG CYS 44 1_555 A ZN 351 C ZN ZN 1_555 A CYS 204 A SG CYS 102 1_555 108.4 A CYS 201 A SG CYS 99 1_555 A ZN 351 C ZN ZN 1_555 A CYS 204 A SG CYS 102 1_555 102.2 A CYS 159 A SG CYS 57 1_555 A ZN 352 D ZN ZN 1_555 A CYS 162 A SG CYS 60 1_555 108.1 A CYS 159 A SG CYS 57 1_555 A ZN 352 D ZN ZN 1_555 A CYS 185 A SG CYS 83 1_555 107.2 A CYS 162 A SG CYS 60 1_555 A ZN 352 D ZN ZN 1_555 A CYS 185 A SG CYS 83 1_555 111.0 A CYS 159 A SG CYS 57 1_555 A ZN 352 D ZN ZN 1_555 A CYS 188 A SG CYS 86 1_555 118.2 A CYS 162 A SG CYS 60 1_555 A ZN 352 D ZN ZN 1_555 A CYS 188 A SG CYS 86 1_555 109.3 A CYS 185 A SG CYS 83 1_555 A ZN 352 D ZN ZN 1_555 A CYS 188 A SG CYS 86 1_555 102.9 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N HIS 118 A N HIS 16 A O VAL 248 A O VAL 146 A O VAL 247 A O VAL 145 A N PHE 232 A N PHE 130 A O GLU 210 A O GLU 108 A N ILE 141 A N ILE 39 A N ALA 136 A N ALA 34 B O TYR 4 B O TYR 4 A N LYS 168 A N LYS 66 A O GLN 182 A O GLN 80 A N LYS 260 A N LYS 158 A O VAL 267 A O VAL 165 A N ALA 270 A N ALA 168 A O LYS 330 A O LYS 228 A O ILE 329 A O ILE 227 A N LYS 309 A N LYS 207 A N LEU 285 A N LEU 183 A O LEU 293 A O LEU 191 1 A GLY 103 A GLY 1 1 Y 1 A ALA 104 A ALA 2 1 Y 1 A GLN 105 A GLN 3 1 Y 1 A ARG 106 A ARG 4 1 Y 1 A PRO 107 A PRO 5 1 Y 1 A ARG 108 A ARG 6 1 Y 1 A GLY 109 A GLY 7 1 Y 1 A ASN 338 A ASN 236 1 Y 1 A HIS 339 A HIS 237 1 Y 1 A PHE 340 A PHE 238 1 Y 1 A THR 341 A THR 239 1 Y 1 A SER 342 A SER 240 1 Y 1 A GLU 343 A GLU 241 1 Y 1 A GLU 344 A GLU 242 1 Y 1 A ASN 345 A ASN 243 1 Y 1 A LEU 346 A LEU 244 1 Y 1 A LYS 347 A LYS 245 1 Y 1 A LYS 348 A LYS 246 1 Y 1 A LEU 349 A LEU 247 1 Y 1 A GLU 350 A GLU 248 1 Y 1 A A O O VAL HOH 218 484 2.08 1 A A N O GLN HOH 228 378 2.13 1 A A O N SER ASP 289 291 2.15 1 A A N O VAL HOH 288 492 2.15 1 A A OD1 O ASN HOH 211 482 2.16 1 A A O O ILE HOH 303 407 2.18 1 A GLN 111 92.04 92.97 1 A CYS 146 -167.20 -47.67 1 A ALA 155 -109.56 -64.08 1 A VAL 156 -38.56 136.30 1 A CYS 162 -154.18 88.77 1 A ASN 163 -51.74 21.20 1 A MET 174 -163.37 -110.30 1 A THR 183 -77.58 -112.19 1 A GLU 184 -21.18 94.98 1 A ASP 186 26.86 -94.05 1 A VAL 187 -99.69 34.35 1 A HIS 189 130.49 124.52 1 A THR 191 -151.52 80.95 1 A ASP 193 176.25 -128.54 1 A ILE 194 45.93 -109.98 1 A ILE 195 81.92 -168.03 1 A ASP 196 62.95 98.37 1 A CYS 201 -38.40 -120.23 1 A LYS 202 152.13 -32.35 1 A CYS 204 -148.64 -0.82 1 A ASN 205 41.84 16.78 1 A LYS 208 57.05 0.08 1 A ALA 236 -69.63 -178.33 1 A ASP 241 117.17 -33.17 1 A SER 258 -147.69 -26.19 1 A GLU 282 -68.60 -172.14 1 A PHE 283 166.63 135.63 1 A GLU 312 -8.01 -121.53 1 A MET 316 85.13 137.23 1 A PRO 319 -36.15 -74.80 1 A TYR 321 131.65 -92.87 PROTEIN_REP.PARAM PROTEIN.TOP WATER_REP.PARAM 47.8 3.70 6.70 0.00 3.70 0.00 -7.40 0.296 0.011 0.269 0.269 2.70 27.5 786 7827 7827 10.0 93.6 RANDOM 278924.70 278924.70 0.000 1,2 RESTRAINED THROUGHOUT 0.0 MAD Engh & Huber FLAT MODEL 33.0786 0.332447 0.47 0.51 2.70 27.5 147 1962 2 0 1813 0.008 1.9 26.0 1.01 1.79 1.50 3.20 2.00 2.45 2.00 3.41 2.50 0.318 0.052 0.326 2.87 37 906 6 3.9 69.4 36.3 2.7 27.5 1NLT 7827 7827 0 0 0.054 1,2 27.3 5.33 0.01145 2.70 2.87 8.67 1,2 1.9 73.1 data reduction DENZO data scaling SCALEPACK phasing SOLVE refinement CNS 1.0 The crystal structure of Hsp40 Ydj1 1 N N 2 N N 3 N N 3 N N 4 N N 4 N N A GLU 125 A GLU 23 HELX_P A GLY 130 A GLY 28 1 1 6 A LEU 274 A LEU 172 HELX_P A GLY 280 A GLY 178 1 2 7 disulf 2.463 A CYS 143 A SG CYS 41 1_555 A CYS 146 A SG CYS 44 1_555 disulf 2.440 A CYS 143 A SG CYS 41 1_555 A CYS 201 A SG CYS 99 1_555 disulf 2.520 A CYS 143 A SG CYS 41 1_555 A CYS 204 A SG CYS 102 1_555 disulf 2.176 A CYS 146 A SG CYS 44 1_555 A CYS 201 A SG CYS 99 1_555 disulf 2.318 A CYS 146 A SG CYS 44 1_555 A CYS 204 A SG CYS 102 1_555 disulf 2.316 A CYS 159 A SG CYS 57 1_555 A CYS 162 A SG CYS 60 1_555 disulf 2.308 A CYS 159 A SG CYS 57 1_555 A CYS 185 A SG CYS 83 1_555 disulf 2.474 A CYS 159 A SG CYS 57 1_555 A CYS 188 A SG CYS 86 1_555 disulf 2.353 A CYS 162 A SG CYS 60 1_555 A CYS 185 A SG CYS 83 1_555 disulf 2.340 A CYS 162 A SG CYS 60 1_555 A CYS 188 A SG CYS 86 1_555 disulf 2.251 A CYS 185 A SG CYS 83 1_555 A CYS 188 A SG CYS 86 1_555 disulf 2.256 A CYS 201 A SG CYS 99 1_555 A CYS 204 A SG CYS 102 1_555 metalc 1.490 A CYS 143 A SG CYS 41 1_555 A ZN 351 C ZN ZN 1_555 metalc 1.425 A CYS 146 A SG CYS 44 1_555 A ZN 351 C ZN ZN 1_555 metalc 1.437 A CYS 159 A SG CYS 57 1_555 A ZN 352 D ZN ZN 1_555 metalc 1.424 A CYS 162 A SG CYS 60 1_555 A ZN 352 D ZN ZN 1_555 metalc 1.432 A CYS 185 A SG CYS 83 1_555 A ZN 352 D ZN ZN 1_555 metalc 1.446 A CYS 188 A SG CYS 86 1_555 A ZN 352 D ZN ZN 1_555 metalc 1.464 A CYS 201 A SG CYS 99 1_555 A ZN 351 C ZN ZN 1_555 metalc 1.434 A CYS 204 A SG CYS 102 1_555 A ZN 351 C ZN ZN 1_555 PROTEIN TRANSPORT beta-strands, chaperone, heat shock, mitochondrion, PROTEIN TRANSPORT MAS5_YEAST UNP 1 103 P25491 GAQRPRGPQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGPMIQRFQ TECDVCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRD GDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPENHFTS EENLKKLE 1NLT PDB 2 1NLT 103 350 1NLT 103 350 P25491 A 1 1 248 1 7 1NLT 1 7 1NLT B 2 1 7 1 PHE engineered mutation ASP 335 1NLT A P25491 UNP 336 233 3 3 2 4 2 parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel A ILE 116 A ILE 14 A ALA 122 A ALA 20 A VAL 247 A VAL 145 A GLU 253 A GLU 151 A ARG 229 A ARG 127 A PHE 232 A PHE 130 A VAL 209 A VAL 107 A VAL 220 A VAL 118 A ARG 131 A ARG 29 A LEU 142 A LEU 40 B TRP 2 B TRP 2 B GLU 5 B GLU 5 A LYS 168 A LYS 66 A GLN 173 A GLN 71 A MET 177 A MET 75 A GLN 182 A GLN 80 A LYS 260 A LYS 158 A ASP 262 A ASP 160 A ASP 265 A ASP 163 A ASP 273 A ASP 171 A LEU 327 A LEU 225 A LYS 334 A LYS 232 A ARG 308 A ARG 206 A ILE 311 A ILE 209 A ALA 284 A ALA 182 A GLU 286 A GLU 184 A TRP 292 A TRP 190 A LYS 294 A LYS 192 BINDING SITE FOR RESIDUE ZN A 351 A ZN 351 Software 5 BINDING SITE FOR RESIDUE ZN A 352 A ZN 352 Software 4 A CYS 143 A CYS 41 5 1_555 A GLU 145 A GLU 43 5 1_555 A CYS 146 A CYS 44 5 1_555 A CYS 201 A CYS 99 5 1_555 A CYS 204 A CYS 102 5 1_555 A CYS 159 A CYS 57 4 1_555 A CYS 162 A CYS 60 4 1_555 A CYS 185 A CYS 83 4 1_555 A CYS 188 A CYS 86 4 1_555 154 P 32 2 1