1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Arnesano, F.
Banci, L.
Bertini, I.
Mangani, S.
Thompsett, A.R.
Structural Proteomics in Europe (SPINE)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
100
3814
3819
10.1073/pnas.0636904100
12651950
A redox switch in CopC: An intriguing copper trafficking protein that binds copper(I) and copper(II)
at different sites
2003
10.2210/pdb1nm4/pdb
pdb_00001nm4
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
10547.078
Copper resistance protein C
1
man
polymer
CopC
no
no
HPKLVSSTPAEGSEGAAPAKIELHFSENLVTQFSGAKLVMTAMPGMEHSPMAVKAAVSGGGDPKTMVITPASPLTAGTYK
VDWRAVSSDTHPITGSVTFKVK
HPKLVSSTPAEGSEGAAPAKIELHFSENLVTQFSGAKLVMTAMPGMEHSPMAVKAAVSGGGDPKTMVITPASPLTAGTYK
VDWRAVSSDTHPITGSVTFKVK
A
CIRMMP01
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Pseudomonas
Escherichia
sample
COPC
317
Pseudomonas syringae
562
Escherichia coli
BL21(DE3)pLys
PLASMID
pET20b
Structural Proteomics in Europe
SPINE
database_2
pdbx_nmr_software
pdbx_nmr_spectrometer
pdbx_struct_assembly
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2003-04-08
1
1
2008-04-29
1
2
2011-07-13
1
3
2022-02-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
_pdbx_nmr_spectrometer.model
Solution structure of apoCopC from Pseudomonas syringae
Y
RCSB
Y
RCSB
2003-01-09
REL
Cu(I)-CopC was obtained by reducing Cu(II)-CopC with one equivalent of sodium ascorbate
1
2D NOESY
3D_13C-separated_NOESY
3D_15N-separated_NOESY
HNHA
HNHB
100mM phosphate
7.0
ambient
298
K
1464 meaningful NOEs, 129 dihedral angle restraints and 34 experimental hydrogen bonds
simulated annealing torsion angle dynamics restrained energy minimization
1
minimized average structure
2.5 mM Cu(I)-CopC 15N,13C; 100mM phosphate buffer NA; 90% H2O, 10% D2O
90% H2O/10% D2O
processing
XwinNMR
Eccles, Guentert, Billeter, Wuethrich
data analysis
XEASY
Guentert, Mumenthaler, Wuethrich
structure solution
DYANA
Borgias, Thomas, James
iterative matrix relaxation
CORMA
Case, Kollman et al.
refinement
Amber
6
700
Bruker
AVANCE
500
Bruker
AVANCE
HIS
1
n
1
HIS
1
A
PRO
2
n
2
PRO
2
A
LYS
3
n
3
LYS
3
A
LEU
4
n
4
LEU
4
A
VAL
5
n
5
VAL
5
A
SER
6
n
6
SER
6
A
SER
7
n
7
SER
7
A
THR
8
n
8
THR
8
A
PRO
9
n
9
PRO
9
A
ALA
10
n
10
ALA
10
A
GLU
11
n
11
GLU
11
A
GLY
12
n
12
GLY
12
A
SER
13
n
13
SER
13
A
GLU
14
n
14
GLU
14
A
GLY
15
n
15
GLY
15
A
ALA
16
n
16
ALA
16
A
ALA
17
n
17
ALA
17
A
PRO
18
n
18
PRO
18
A
ALA
19
n
19
ALA
19
A
LYS
20
n
20
LYS
20
A
ILE
21
n
21
ILE
21
A
GLU
22
n
22
GLU
22
A
LEU
23
n
23
LEU
23
A
HIS
24
n
24
HIS
24
A
PHE
25
n
25
PHE
25
A
SER
26
n
26
SER
26
A
GLU
27
n
27
GLU
27
A
ASN
28
n
28
ASN
28
A
LEU
29
n
29
LEU
29
A
VAL
30
n
30
VAL
30
A
THR
31
n
31
THR
31
A
GLN
32
n
32
GLN
32
A
PHE
33
n
33
PHE
33
A
SER
34
n
34
SER
34
A
GLY
35
n
35
GLY
35
A
ALA
36
n
36
ALA
36
A
LYS
37
n
37
LYS
37
A
LEU
38
n
38
LEU
38
A
VAL
39
n
39
VAL
39
A
MET
40
n
40
MET
40
A
THR
41
n
41
THR
41
A
ALA
42
n
42
ALA
42
A
MET
43
n
43
MET
43
A
PRO
44
n
44
PRO
44
A
GLY
45
n
45
GLY
45
A
MET
46
n
46
MET
46
A
GLU
47
n
47
GLU
47
A
HIS
48
n
48
HIS
48
A
SER
49
n
49
SER
49
A
PRO
50
n
50
PRO
50
A
MET
51
n
51
MET
51
A
ALA
52
n
52
ALA
52
A
VAL
53
n
53
VAL
53
A
LYS
54
n
54
LYS
54
A
ALA
55
n
55
ALA
55
A
ALA
56
n
56
ALA
56
A
VAL
57
n
57
VAL
57
A
SER
58
n
58
SER
58
A
GLY
59
n
59
GLY
59
A
GLY
60
n
60
GLY
60
A
GLY
61
n
61
GLY
61
A
ASP
62
n
62
ASP
62
A
PRO
63
n
63
PRO
63
A
LYS
64
n
64
LYS
64
A
THR
65
n
65
THR
65
A
MET
66
n
66
MET
66
A
VAL
67
n
67
VAL
67
A
ILE
68
n
68
ILE
68
A
THR
69
n
69
THR
69
A
PRO
70
n
70
PRO
70
A
ALA
71
n
71
ALA
71
A
SER
72
n
72
SER
72
A
PRO
73
n
73
PRO
73
A
LEU
74
n
74
LEU
74
A
THR
75
n
75
THR
75
A
ALA
76
n
76
ALA
76
A
GLY
77
n
77
GLY
77
A
THR
78
n
78
THR
78
A
TYR
79
n
79
TYR
79
A
LYS
80
n
80
LYS
80
A
VAL
81
n
81
VAL
81
A
ASP
82
n
82
ASP
82
A
TRP
83
n
83
TRP
83
A
ARG
84
n
84
ARG
84
A
ALA
85
n
85
ALA
85
A
VAL
86
n
86
VAL
86
A
SER
87
n
87
SER
87
A
SER
88
n
88
SER
88
A
ASP
89
n
89
ASP
89
A
THR
90
n
90
THR
90
A
HIS
91
n
91
HIS
91
A
PRO
92
n
92
PRO
92
A
ILE
93
n
93
ILE
93
A
THR
94
n
94
THR
94
A
GLY
95
n
95
GLY
95
A
SER
96
n
96
SER
96
A
VAL
97
n
97
VAL
97
A
THR
98
n
98
THR
98
A
PHE
99
n
99
PHE
99
A
LYS
100
n
100
LYS
100
A
VAL
101
n
101
VAL
101
A
LYS
102
n
102
LYS
102
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
SER
6
A
N
SER
6
A
O
HIS
24
A
O
HIS
24
A
N
ILE
21
A
N
ILE
21
A
O
ILE
68
A
O
ILE
68
A
O
THR
69
A
O
THR
69
A
N
ALA
56
A
N
ALA
56
A
O
MET
51
A
O
MET
51
A
N
MET
40
A
N
MET
40
A
N
GLY
35
A
N
GLY
35
A
O
ARG
84
A
O
ARG
84
A
N
VAL
81
A
N
VAL
81
A
O
VAL
97
A
O
VAL
97
1
A
LYS
3
62.63
-163.62
1
A
PRO
9
-88.19
-79.03
1
A
ALA
10
175.45
43.08
1
A
GLU
11
-50.56
96.67
1
A
LEU
29
-94.79
-152.86
1
A
VAL
30
81.88
59.38
1
A
THR
31
-82.90
43.18
1
A
GLN
32
70.64
30.05
1
A
PHE
33
-144.76
35.72
1
A
ASP
89
-78.28
45.92
1
A
THR
90
57.43
-103.09
minimized average
Solution structure of Cu(I)-CopC from Pseudomonas syringae
1
N
N
METAL BINDING PROTEIN
copper trafficking, redox switch, Structural Proteomics in Europe, SPINE, Structural Genomics, METAL BINDING PROTEIN
COPC_PSESM
UNP
1
25
P12376
HPKLVSSTPAEGSEGAAPAKIELHFSENLVTQFSGAKLVMTAMPGMEHSPMAVKAAVSGGGDPKTMVITPASPLTAGTYK
VDWRAVSSDTHPITGSVTFKVK
25
126
1NM4
1
102
P12376
A
1
1
102
4
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LEU
4
A
LEU
4
A
THR
8
A
THR
8
A
ILE
21
A
ILE
21
A
PHE
25
A
PHE
25
A
THR
65
A
THR
65
A
PRO
70
A
PRO
70
A
ALA
55
A
ALA
55
A
GLY
59
A
GLY
59
A
MET
51
A
MET
51
A
VAL
53
A
VAL
53
A
GLY
35
A
GLY
35
A
ALA
42
A
ALA
42
A
GLY
77
A
GLY
77
A
SER
87
A
SER
87
A
THR
90
A
THR
90
A
VAL
101
A
VAL
101