0.014523
0.000000
0.000000
0.000000
0.011231
0.000000
0.000000
0.000000
0.010359
0.00000
0.00000
0.00000
Erlanson, D.A.
Lam, J.
Wiesmann, C.
Luong, T.N.
Simmons, R.L.
DeLano, W.
Choong, I.C.
Flanagan, M.
Lee, D.
O'Brian, T.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
68.858
89.043
96.531
C20 H24 N2 O8 S5
580.738
3-(3-{2-[(5-METHANESULFONYL-THIOPHENE-2-CARBONYL)-AMINO]-ETHYLDISULFANYLMETHYL}- BENZENESULFONYLAMINO)-4-OXO-PENTANOIC ACID
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
O
N
2
N
C
Y
3
N
C
Y
4
N
S
Y
5
N
C
N
6
N
S
N
7
N
O
N
8
N
O
N
9
N
C
Y
10
N
C
Y
11
N
C
N
12
N
N
N
13
N
C
N
14
N
C
N
15
N
S
N
16
N
S
N
17
N
C
Y
18
N
C
Y
19
N
C
Y
20
N
C
Y
21
N
C
Y
22
N
C
Y
23
N
C
N
24
N
S
N
25
N
O
N
26
N
O
N
27
N
N
N
28
S
C
N
29
N
C
N
30
N
O
N
31
N
C
N
32
N
C
N
33
N
C
N
34
N
O
N
35
N
O
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
N
N
61
S
C
N
62
N
C
N
63
N
O
N
64
N
C
N
65
N
O
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
N
N
74
S
C
N
75
N
C
N
76
N
O
N
77
N
C
N
78
N
C
N
79
N
C
N
80
N
N
N
81
N
C
N
82
N
N
N
83
N
N
N
84
N
O
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
N
N
101
S
C
N
102
N
C
N
103
N
O
N
104
N
C
N
105
N
C
N
106
N
O
N
107
N
N
N
108
N
O
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
N
N
118
S
C
N
119
N
C
N
120
N
O
N
121
N
C
N
122
N
C
N
123
N
O
N
124
N
O
N
125
N
O
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
N
N
134
R
C
N
135
N
C
N
136
N
O
N
137
N
C
N
138
N
S
N
139
N
O
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
N
C
N
152
N
C
N
153
N
C
N
154
N
O
N
155
N
N
N
156
N
O
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
N
N
168
S
C
N
169
N
C
N
170
N
O
N
171
N
C
N
172
N
C
N
173
N
C
N
174
N
O
N
175
N
O
N
176
N
O
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
N
N
187
N
C
N
188
N
C
N
189
N
O
N
190
N
O
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
N
N
197
S
C
N
198
N
C
N
199
N
O
N
200
N
C
Y
201
N
C
Y
202
N
N
Y
203
N
C
Y
204
N
C
Y
205
N
N
N
206
N
O
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
O
N
218
N
H
N
219
N
H
N
220
N
N
N
221
S
C
N
222
N
C
N
223
N
O
N
224
S
C
N
225
N
C
N
226
N
C
N
227
N
C
N
228
N
O
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
N
N
243
S
C
N
244
N
C
N
245
N
O
N
246
N
C
N
247
N
C
N
248
N
C
N
249
N
C
N
250
N
O
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
N
N
265
S
C
N
266
N
C
N
267
N
O
N
268
N
C
N
269
N
C
N
270
N
C
N
271
N
C
N
272
N
N
N
273
N
O
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
N
N
290
S
C
N
291
N
C
N
292
N
O
N
293
N
C
N
294
N
C
N
295
N
S
N
296
N
C
N
297
N
O
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
N
N
310
S
C
N
311
N
C
N
312
N
O
N
313
N
C
Y
314
N
C
Y
315
N
C
Y
316
N
C
Y
317
N
C
Y
318
N
C
Y
319
N
C
N
320
N
O
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
N
N
333
S
C
N
334
N
C
N
335
N
O
N
336
N
C
N
337
N
C
N
338
N
C
N
339
N
O
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
N
N
350
S
C
N
351
N
C
N
352
N
O
N
353
N
C
N
354
N
O
N
355
N
O
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
N
N
364
S
C
N
365
N
C
N
366
N
O
N
367
R
C
N
368
N
O
N
369
N
C
N
370
N
O
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
N
N
381
S
C
N
382
N
C
N
383
N
O
N
384
N
C
Y
385
N
C
Y
386
N
C
Y
387
N
C
Y
388
N
N
Y
389
N
C
Y
390
N
C
Y
391
N
C
Y
392
N
C
Y
393
N
C
N
394
N
O
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
N
N
408
S
C
N
409
N
C
N
410
N
O
N
411
N
C
Y
412
N
C
Y
413
N
C
Y
414
N
C
Y
415
N
C
Y
416
N
C
Y
417
N
C
N
418
N
O
N
419
N
O
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
N
N
432
S
C
N
433
N
C
N
434
N
O
N
435
N
C
N
436
N
C
N
437
N
C
N
438
N
O
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
Y
4
N
sing
Y
5
N
doub
Y
6
N
sing
N
7
N
sing
Y
8
N
doub
N
9
N
doub
N
10
N
doub
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
Y
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
Y
31
N
doub
Y
32
N
sing
Y
33
N
sing
N
34
N
sing
Y
35
N
doub
N
36
N
sing
Y
37
N
sing
N
38
N
sing
Y
39
N
doub
N
40
N
sing
N
41
N
sing
N
42
N
doub
N
43
N
doub
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
doub
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
doub
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
doub
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
doub
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
doub
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
doub
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
doub
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
doub
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
doub
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
doub
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
doub
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
Y
200
N
sing
Y
201
N
doub
Y
202
N
doub
N
203
N
sing
Y
204
N
sing
N
205
N
sing
Y
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
doub
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
doub
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
doub
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
doub
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
doub
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
Y
308
N
doub
Y
309
N
sing
Y
310
N
sing
N
311
N
sing
Y
312
N
doub
N
313
N
sing
Y
314
N
doub
N
315
N
sing
Y
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
doub
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
doub
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
doub
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
doub
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
Y
377
N
doub
Y
378
N
sing
Y
379
N
sing
N
380
N
sing
Y
381
N
doub
Y
382
N
sing
Y
383
N
sing
N
384
N
sing
Y
385
N
sing
Y
386
N
doub
N
387
N
sing
Y
388
N
doub
N
389
N
sing
Y
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
doub
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
Y
405
N
doub
Y
406
N
sing
Y
407
N
sing
N
408
N
sing
Y
409
N
doub
N
410
N
sing
Y
411
N
doub
N
412
N
sing
Y
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
doub
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
US
Nat.Biotechnol.
NABIF9
2119
1087-0156
21
308
314
10.1038/nbt786
12563278
In situ assembly of enzyme inhibitors using extended tethering.
2003
US
J.Med.Chem.
JMCMAR
0151
0022-2623
45
5005
5022
10.1021/jm020230j
Identification of Potent and Selective Small-Molecule Inhibitors of
Caspase-3 through the Use of Extended Tethering and Structure-Based Drug Design
2002
10.2210/pdb1nmq/pdb
pdb_00001nmq
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
IMAGE PLATE
2001-05-05
RIGAKU RAXIS IV
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU300
28518.500
Caspase-3
3.4.22.-
large subunit
2
man
polymer
580.738
3-(3-{2-[(5-METHANESULFONYL-THIOPHENE-2-CARBONYL)-AMINO]-ETHYLDISULFANYLMETHYL}- BENZENESULFONYLAMINO)-4-OXO-PENTANOIC ACID
2
syn
non-polymer
18.015
water
100
nat
water
Apopain; Cysteine protease CPP32; Yama protein; CPP-32; CASP-3;
SREBP cleavage activity 1; SCA-1
E.C.3.4.22.-
E.C.3.4.22.-
no
no
SGISLDNSYKMDYPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDLTREEIVELMRDVSKEDH
SKRSSFVCVLLSHGEEGIIFGTNGPVDLKKITNFFRGDRCRSLTGKPKLFIIQACRGTELDCGIETDSGVDDDMACHKIP
VDADFLYAYSTAPGYYSWRNSKDGSWFIQSLCAMLKQYADKLEFMHILTRVNRKVATEFESFSFDATFHAKKQIPCIVSM
LTKELYFYH
SGISLDNSYKMDYPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDLTREEIVELMRDVSKEDH
SKRSSFVCVLLSHGEEGIIFGTNGPVDLKKITNFFRGDRCRSLTGKPKLFIIQACRGTELDCGIETDSGVDDDMACHKIP
VDADFLYAYSTAPGYYSWRNSKDGSWFIQSLCAMLKQYADKLEFMHILTRVNRKVATEFESFSFDATFHAKKQIPCIVSM
LTKELYFYH
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
sample
9606
Homo sapiens
562
Escherichia coli
1
2.63
52.8
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_conn
struct_ncs_dom_lim
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
2003-03-11
1
1
2008-04-29
1
2
2011-07-13
1
3
2023-08-16
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
_struct_ncs_dom_lim.beg_auth_comp_id
_struct_ncs_dom_lim.end_auth_comp_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2003-01-10
REL
REL
160
3-(3-{2-[(5-METHANESULFONYL-THIOPHENE-2-CARBONYL)-AMINO]-ETHYLDISULFANYLMETHYL}- BENZENESULFONYLAMINO)-4-OXO-PENTANOIC ACID
HOH
water
1CP3
PDB
experimental model
160
1278
2
160
160
1278
A
160
5278
2
160
160
5278
B
HOH
1
3
HOH
HOH
1279
A
HOH
3
3
HOH
HOH
1280
A
HOH
4
3
HOH
HOH
1281
A
HOH
5
3
HOH
HOH
1282
A
HOH
6
3
HOH
HOH
1283
A
HOH
7
3
HOH
HOH
1284
A
HOH
9
3
HOH
HOH
1285
A
HOH
10
3
HOH
HOH
1286
A
HOH
12
3
HOH
HOH
1287
A
HOH
18
3
HOH
HOH
1288
A
HOH
21
3
HOH
HOH
1289
A
HOH
25
3
HOH
HOH
1290
A
HOH
26
3
HOH
HOH
1291
A
HOH
27
3
HOH
HOH
1292
A
HOH
28
3
HOH
HOH
1293
A
HOH
29
3
HOH
HOH
1294
A
HOH
31
3
HOH
HOH
1295
A
HOH
34
3
HOH
HOH
1296
A
HOH
35
3
HOH
HOH
1297
A
HOH
36
3
HOH
HOH
1298
A
HOH
37
3
HOH
HOH
1299
A
HOH
39
3
HOH
HOH
1300
A
HOH
40
3
HOH
HOH
1301
A
HOH
41
3
HOH
HOH
1302
A
HOH
42
3
HOH
HOH
1303
A
HOH
43
3
HOH
HOH
1304
A
HOH
44
3
HOH
HOH
1305
A
HOH
45
3
HOH
HOH
1306
A
HOH
48
3
HOH
HOH
1307
A
HOH
53
3
HOH
HOH
1308
A
HOH
57
3
HOH
HOH
1309
A
HOH
58
3
HOH
HOH
1310
A
HOH
61
3
HOH
HOH
1311
A
HOH
62
3
HOH
HOH
1312
A
HOH
63
3
HOH
HOH
1313
A
HOH
67
3
HOH
HOH
1314
A
HOH
71
3
HOH
HOH
1315
A
HOH
73
3
HOH
HOH
1316
A
HOH
74
3
HOH
HOH
1317
A
HOH
80
3
HOH
HOH
1318
A
HOH
81
3
HOH
HOH
1319
A
HOH
82
3
HOH
HOH
1320
A
HOH
83
3
HOH
HOH
1321
A
HOH
84
3
HOH
HOH
1322
A
HOH
86
3
HOH
HOH
1323
A
HOH
87
3
HOH
HOH
1324
A
HOH
88
3
HOH
HOH
1325
A
HOH
90
3
HOH
HOH
1326
A
HOH
91
3
HOH
HOH
1327
A
HOH
94
3
HOH
HOH
1328
A
HOH
95
3
HOH
HOH
1329
A
HOH
96
3
HOH
HOH
1330
A
HOH
99
3
HOH
HOH
1331
A
HOH
2
3
HOH
HOH
5279
B
HOH
8
3
HOH
HOH
5280
B
HOH
11
3
HOH
HOH
5281
B
HOH
13
3
HOH
HOH
5282
B
HOH
14
3
HOH
HOH
5283
B
HOH
15
3
HOH
HOH
5284
B
HOH
16
3
HOH
HOH
5285
B
HOH
17
3
HOH
HOH
5286
B
HOH
19
3
HOH
HOH
5287
B
HOH
20
3
HOH
HOH
5288
B
HOH
22
3
HOH
HOH
5289
B
HOH
23
3
HOH
HOH
5290
B
HOH
24
3
HOH
HOH
5291
B
HOH
30
3
HOH
HOH
5292
B
HOH
32
3
HOH
HOH
5293
B
HOH
33
3
HOH
HOH
5294
B
HOH
38
3
HOH
HOH
5295
B
HOH
46
3
HOH
HOH
5296
B
HOH
47
3
HOH
HOH
5297
B
HOH
49
3
HOH
HOH
5298
B
HOH
50
3
HOH
HOH
5299
B
HOH
51
3
HOH
HOH
5300
B
HOH
52
3
HOH
HOH
5301
B
HOH
54
3
HOH
HOH
5302
B
HOH
55
3
HOH
HOH
5303
B
HOH
56
3
HOH
HOH
5304
B
HOH
59
3
HOH
HOH
5305
B
HOH
60
3
HOH
HOH
5306
B
HOH
64
3
HOH
HOH
5307
B
HOH
65
3
HOH
HOH
5308
B
HOH
66
3
HOH
HOH
5309
B
HOH
68
3
HOH
HOH
5310
B
HOH
69
3
HOH
HOH
5311
B
HOH
70
3
HOH
HOH
5312
B
HOH
72
3
HOH
HOH
5313
B
HOH
75
3
HOH
HOH
5314
B
HOH
76
3
HOH
HOH
5315
B
HOH
77
3
HOH
HOH
5316
B
HOH
78
3
HOH
HOH
5317
B
HOH
79
3
HOH
HOH
5318
B
HOH
85
3
HOH
HOH
5319
B
HOH
89
3
HOH
HOH
5320
B
HOH
92
3
HOH
HOH
5321
B
HOH
93
3
HOH
HOH
5322
B
HOH
97
3
HOH
HOH
5323
B
HOH
98
3
HOH
HOH
5324
B
HOH
100
3
HOH
HOH
5325
B
n
1
29
A
n
2
30
A
n
3
31
A
n
4
32
A
n
5
33
A
ASP
34
n
6
ASP
34
A
ASN
35
n
7
ASN
35
A
SER
36
n
8
SER
36
A
TYR
37
n
9
TYR
37
A
LYS
38
n
10
LYS
38
A
MET
39
n
11
MET
39
A
ASP
40
n
12
ASP
40
A
TYR
41
n
13
TYR
41
A
PRO
42
n
14
PRO
42
A
GLU
43
n
15
GLU
43
A
MET
44
n
16
MET
44
A
GLY
45
n
17
GLY
45
A
LEU
46
n
18
LEU
46
A
CYS
47
n
19
CYS
47
A
ILE
48
n
20
ILE
48
A
ILE
49
n
21
ILE
49
A
ILE
50
n
22
ILE
50
A
ASN
51
n
23
ASN
51
A
ASN
52
n
24
ASN
52
A
LYS
53
n
25
LYS
53
A
ASN
54
n
26
ASN
54
A
PHE
55
n
27
PHE
55
A
HIS
56
n
28
HIS
56
A
LYS
57
n
29
LYS
57
A
SER
58
n
30
SER
58
A
THR
59
n
31
THR
59
A
GLY
60
n
32
GLY
60
A
MET
61
n
33
MET
61
A
THR
62
n
34
THR
62
A
SER
63
n
35
SER
63
A
ARG
64
n
36
ARG
64
A
SER
65
n
37
SER
65
A
GLY
66
n
38
GLY
66
A
THR
67
n
39
THR
67
A
ASP
68
n
40
ASP
68
A
VAL
69
n
41
VAL
69
A
ASP
70
n
42
ASP
70
A
ALA
71
n
43
ALA
71
A
ALA
72
n
44
ALA
72
A
ASN
73
n
45
ASN
73
A
LEU
74
n
46
LEU
74
A
ARG
75
n
47
ARG
75
A
GLU
76
n
48
GLU
76
A
THR
77
n
49
THR
77
A
PHE
78
n
50
PHE
78
A
ARG
79
n
51
ARG
79
A
ASN
80
n
52
ASN
80
A
LEU
81
n
53
LEU
81
A
LYS
82
n
54
LYS
82
A
TYR
83
n
55
TYR
83
A
GLU
84
n
56
GLU
84
A
VAL
85
n
57
VAL
85
A
ARG
86
n
58
ARG
86
A
ASN
87
n
59
ASN
87
A
LYS
88
n
60
LYS
88
A
ASN
89
n
61
ASN
89
A
ASP
90
n
62
ASP
90
A
LEU
91
n
63
LEU
91
A
THR
92
n
64
THR
92
A
ARG
93
n
65
ARG
93
A
GLU
94
n
66
GLU
94
A
GLU
95
n
67
GLU
95
A
ILE
96
n
68
ILE
96
A
VAL
97
n
69
VAL
97
A
GLU
98
n
70
GLU
98
A
LEU
99
n
71
LEU
99
A
MET
100
n
72
MET
100
A
ARG
101
n
73
ARG
101
A
ASP
102
n
74
ASP
102
A
VAL
103
n
75
VAL
103
A
SER
104
n
76
SER
104
A
LYS
105
n
77
LYS
105
A
GLU
106
n
78
GLU
106
A
ASP
107
n
79
ASP
107
A
HIS
108
n
80
HIS
108
A
SER
109
n
81
SER
109
A
LYS
110
n
82
LYS
110
A
ARG
111
n
83
ARG
111
A
SER
112
n
84
SER
112
A
SER
113
n
85
SER
113
A
PHE
114
n
86
PHE
114
A
VAL
115
n
87
VAL
115
A
CYS
116
n
88
CYS
116
A
VAL
117
n
89
VAL
117
A
LEU
118
n
90
LEU
118
A
LEU
119
n
91
LEU
119
A
SER
120
n
92
SER
120
A
HIS
121
n
93
HIS
121
A
GLY
122
n
94
GLY
122
A
GLU
123
n
95
GLU
123
A
GLU
124
n
96
GLU
124
A
GLY
125
n
97
GLY
125
A
ILE
126
n
98
ILE
126
A
ILE
127
n
99
ILE
127
A
PHE
128
n
100
PHE
128
A
GLY
129
n
101
GLY
129
A
THR
130
n
102
THR
130
A
ASN
131
n
103
ASN
131
A
GLY
132
n
104
GLY
132
A
PRO
133
n
105
PRO
133
A
VAL
134
n
106
VAL
134
A
ASP
135
n
107
ASP
135
A
LEU
136
n
108
LEU
136
A
LYS
137
n
109
LYS
137
A
LYS
138
n
110
LYS
138
A
ILE
139
n
111
ILE
139
A
THR
140
n
112
THR
140
A
ASN
141
n
113
ASN
141
A
PHE
142
n
114
PHE
142
A
PHE
143
n
115
PHE
143
A
ARG
144
n
116
ARG
144
A
GLY
145
n
117
GLY
145
A
ASP
146
n
118
ASP
146
A
ARG
147
n
119
ARG
147
A
CYS
148
n
120
CYS
148
A
ARG
149
n
121
ARG
149
A
SER
150
n
122
SER
150
A
LEU
151
n
123
LEU
151
A
THR
152
n
124
THR
152
A
GLY
153
n
125
GLY
153
A
LYS
154
n
126
LYS
154
A
PRO
155
n
127
PRO
155
A
LYS
156
n
128
LYS
156
A
LEU
157
n
129
LEU
157
A
PHE
158
n
130
PHE
158
A
ILE
159
n
131
ILE
159
A
ILE
160
n
132
ILE
160
A
GLN
161
n
133
GLN
161
A
ALA
162
n
134
ALA
162
A
CYS
163
n
135
CYS
163
A
ARG
164
n
136
ARG
164
A
GLY
165
n
137
GLY
165
A
THR
166
n
138
THR
166
A
GLU
167
n
139
GLU
167
A
LEU
168
n
140
LEU
168
A
ASP
169
n
141
ASP
169
A
CYS
170
n
142
CYS
170
A
GLY
171
n
143
GLY
171
A
ILE
172
n
144
ILE
172
A
GLU
173
n
145
GLU
173
A
THR
174
n
146
THR
174
A
n
147
175
A
n
148
176
A
n
149
177
A
n
150
178
A
ASP
179
n
151
ASP
179
A
ASP
180
n
152
ASP
180
A
ASP
181
n
153
ASP
181
A
n
154
182
A
n
155
183
A
CYS
184
n
156
CYS
184
A
HIS
185
n
157
HIS
185
A
LYS
186
n
158
LYS
186
A
ILE
187
n
159
ILE
187
A
PRO
188
n
160
PRO
188
A
VAL
189
n
161
VAL
189
A
ASP
190
n
162
ASP
190
A
ALA
191
n
163
ALA
191
A
ASP
192
n
164
ASP
192
A
PHE
193
n
165
PHE
193
A
LEU
194
n
166
LEU
194
A
TYR
195
n
167
TYR
195
A
ALA
196
n
168
ALA
196
A
TYR
197
n
169
TYR
197
A
SER
198
n
170
SER
198
A
THR
199
n
171
THR
199
A
ALA
200
n
172
ALA
200
A
PRO
201
n
173
PRO
201
A
GLY
202
n
174
GLY
202
A
TYR
203
n
175
TYR
203
A
TYR
204
n
176
TYR
204
A
SER
205
n
177
SER
205
A
TRP
206
n
178
TRP
206
A
ARG
207
n
179
ARG
207
A
ASN
208
n
180
ASN
208
A
SER
209
n
181
SER
209
A
LYS
210
n
182
LYS
210
A
ASP
211
n
183
ASP
211
A
GLY
212
n
184
GLY
212
A
SER
213
n
185
SER
213
A
TRP
214
n
186
TRP
214
A
PHE
215
n
187
PHE
215
A
ILE
216
n
188
ILE
216
A
GLN
217
n
189
GLN
217
A
SER
218
n
190
SER
218
A
LEU
219
n
191
LEU
219
A
CYS
220
n
192
CYS
220
A
ALA
221
n
193
ALA
221
A
MET
222
n
194
MET
222
A
LEU
223
n
195
LEU
223
A
LYS
224
n
196
LYS
224
A
GLN
225
n
197
GLN
225
A
TYR
226
n
198
TYR
226
A
ALA
227
n
199
ALA
227
A
ASP
228
n
200
ASP
228
A
LYS
229
n
201
LYS
229
A
LEU
230
n
202
LEU
230
A
GLU
231
n
203
GLU
231
A
PHE
232
n
204
PHE
232
A
MET
233
n
205
MET
233
A
HIS
234
n
206
HIS
234
A
ILE
235
n
207
ILE
235
A
LEU
236
n
208
LEU
236
A
THR
237
n
209
THR
237
A
ARG
238
n
210
ARG
238
A
VAL
239
n
211
VAL
239
A
ASN
240
n
212
ASN
240
A
ARG
241
n
213
ARG
241
A
LYS
242
n
214
LYS
242
A
VAL
243
n
215
VAL
243
A
ALA
244
n
216
ALA
244
A
THR
245
n
217
THR
245
A
GLU
246
n
218
GLU
246
A
PHE
247
n
219
PHE
247
A
GLU
248
n
220
GLU
248
A
SER
249
n
221
SER
249
A
PHE
250
n
222
PHE
250
A
SER
251
n
223
SER
251
A
PHE
252
n
224
PHE
252
A
ASP
253
n
225
ASP
253
A
ALA
254
n
226
ALA
254
A
THR
255
n
227
THR
255
A
PHE
256
n
228
PHE
256
A
HIS
257
n
229
HIS
257
A
ALA
258
n
230
ALA
258
A
LYS
259
n
231
LYS
259
A
LYS
260
n
232
LYS
260
A
GLN
261
n
233
GLN
261
A
ILE
262
n
234
ILE
262
A
PRO
263
n
235
PRO
263
A
CYS
264
n
236
CYS
264
A
ILE
265
n
237
ILE
265
A
VAL
266
n
238
VAL
266
A
SER
267
n
239
SER
267
A
MET
268
n
240
MET
268
A
LEU
269
n
241
LEU
269
A
THR
270
n
242
THR
270
A
LYS
271
n
243
LYS
271
A
GLU
272
n
244
GLU
272
A
LEU
273
n
245
LEU
273
A
TYR
274
n
246
TYR
274
A
PHE
275
n
247
PHE
275
A
TYR
276
n
248
TYR
276
A
HIS
277
n
249
HIS
277
A
n
1
29
B
n
2
30
B
n
3
31
B
n
4
32
B
n
5
33
B
ASP
34
n
6
ASP
34
B
ASN
35
n
7
ASN
35
B
SER
36
n
8
SER
36
B
TYR
37
n
9
TYR
37
B
LYS
38
n
10
LYS
38
B
MET
39
n
11
MET
39
B
ASP
40
n
12
ASP
40
B
TYR
41
n
13
TYR
41
B
PRO
42
n
14
PRO
42
B
GLU
43
n
15
GLU
43
B
MET
44
n
16
MET
44
B
GLY
45
n
17
GLY
45
B
LEU
46
n
18
LEU
46
B
CYS
47
n
19
CYS
47
B
ILE
48
n
20
ILE
48
B
ILE
49
n
21
ILE
49
B
ILE
50
n
22
ILE
50
B
ASN
51
n
23
ASN
51
B
ASN
52
n
24
ASN
52
B
LYS
53
n
25
LYS
53
B
ASN
54
n
26
ASN
54
B
PHE
55
n
27
PHE
55
B
HIS
56
n
28
HIS
56
B
LYS
57
n
29
LYS
57
B
SER
58
n
30
SER
58
B
THR
59
n
31
THR
59
B
GLY
60
n
32
GLY
60
B
MET
61
n
33
MET
61
B
THR
62
n
34
THR
62
B
SER
63
n
35
SER
63
B
ARG
64
n
36
ARG
64
B
SER
65
n
37
SER
65
B
GLY
66
n
38
GLY
66
B
THR
67
n
39
THR
67
B
ASP
68
n
40
ASP
68
B
VAL
69
n
41
VAL
69
B
ASP
70
n
42
ASP
70
B
ALA
71
n
43
ALA
71
B
ALA
72
n
44
ALA
72
B
ASN
73
n
45
ASN
73
B
LEU
74
n
46
LEU
74
B
ARG
75
n
47
ARG
75
B
GLU
76
n
48
GLU
76
B
THR
77
n
49
THR
77
B
PHE
78
n
50
PHE
78
B
ARG
79
n
51
ARG
79
B
ASN
80
n
52
ASN
80
B
LEU
81
n
53
LEU
81
B
LYS
82
n
54
LYS
82
B
TYR
83
n
55
TYR
83
B
GLU
84
n
56
GLU
84
B
VAL
85
n
57
VAL
85
B
ARG
86
n
58
ARG
86
B
ASN
87
n
59
ASN
87
B
LYS
88
n
60
LYS
88
B
ASN
89
n
61
ASN
89
B
ASP
90
n
62
ASP
90
B
LEU
91
n
63
LEU
91
B
THR
92
n
64
THR
92
B
ARG
93
n
65
ARG
93
B
GLU
94
n
66
GLU
94
B
GLU
95
n
67
GLU
95
B
ILE
96
n
68
ILE
96
B
VAL
97
n
69
VAL
97
B
GLU
98
n
70
GLU
98
B
LEU
99
n
71
LEU
99
B
MET
100
n
72
MET
100
B
ARG
101
n
73
ARG
101
B
ASP
102
n
74
ASP
102
B
VAL
103
n
75
VAL
103
B
SER
104
n
76
SER
104
B
LYS
105
n
77
LYS
105
B
GLU
106
n
78
GLU
106
B
ASP
107
n
79
ASP
107
B
HIS
108
n
80
HIS
108
B
SER
109
n
81
SER
109
B
LYS
110
n
82
LYS
110
B
ARG
111
n
83
ARG
111
B
SER
112
n
84
SER
112
B
SER
113
n
85
SER
113
B
PHE
114
n
86
PHE
114
B
VAL
115
n
87
VAL
115
B
CYS
116
n
88
CYS
116
B
VAL
117
n
89
VAL
117
B
LEU
118
n
90
LEU
118
B
LEU
119
n
91
LEU
119
B
SER
120
n
92
SER
120
B
HIS
121
n
93
HIS
121
B
GLY
122
n
94
GLY
122
B
GLU
123
n
95
GLU
123
B
GLU
124
n
96
GLU
124
B
GLY
125
n
97
GLY
125
B
ILE
126
n
98
ILE
126
B
ILE
127
n
99
ILE
127
B
PHE
128
n
100
PHE
128
B
GLY
129
n
101
GLY
129
B
THR
130
n
102
THR
130
B
ASN
131
n
103
ASN
131
B
GLY
132
n
104
GLY
132
B
PRO
133
n
105
PRO
133
B
VAL
134
n
106
VAL
134
B
ASP
135
n
107
ASP
135
B
LEU
136
n
108
LEU
136
B
LYS
137
n
109
LYS
137
B
LYS
138
n
110
LYS
138
B
ILE
139
n
111
ILE
139
B
THR
140
n
112
THR
140
B
ASN
141
n
113
ASN
141
B
PHE
142
n
114
PHE
142
B
PHE
143
n
115
PHE
143
B
ARG
144
n
116
ARG
144
B
GLY
145
n
117
GLY
145
B
ASP
146
n
118
ASP
146
B
ARG
147
n
119
ARG
147
B
CYS
148
n
120
CYS
148
B
ARG
149
n
121
ARG
149
B
SER
150
n
122
SER
150
B
LEU
151
n
123
LEU
151
B
THR
152
n
124
THR
152
B
GLY
153
n
125
GLY
153
B
LYS
154
n
126
LYS
154
B
PRO
155
n
127
PRO
155
B
LYS
156
n
128
LYS
156
B
LEU
157
n
129
LEU
157
B
PHE
158
n
130
PHE
158
B
ILE
159
n
131
ILE
159
B
ILE
160
n
132
ILE
160
B
GLN
161
n
133
GLN
161
B
ALA
162
n
134
ALA
162
B
CYS
163
n
135
CYS
163
B
ARG
164
n
136
ARG
164
B
GLY
165
n
137
GLY
165
B
THR
166
n
138
THR
166
B
GLU
167
n
139
GLU
167
B
LEU
168
n
140
LEU
168
B
ASP
169
n
141
ASP
169
B
CYS
170
n
142
CYS
170
B
GLY
171
n
143
GLY
171
B
ILE
172
n
144
ILE
172
B
GLU
173
n
145
GLU
173
B
THR
174
n
146
THR
174
B
n
147
175
B
n
148
176
B
n
149
177
B
n
150
178
B
ASP
179
n
151
ASP
179
B
ASP
180
n
152
ASP
180
B
ASP
181
n
153
ASP
181
B
n
154
182
B
n
155
183
B
CYS
184
n
156
CYS
184
B
HIS
185
n
157
HIS
185
B
LYS
186
n
158
LYS
186
B
ILE
187
n
159
ILE
187
B
PRO
188
n
160
PRO
188
B
VAL
189
n
161
VAL
189
B
ASP
190
n
162
ASP
190
B
ALA
191
n
163
ALA
191
B
ASP
192
n
164
ASP
192
B
PHE
193
n
165
PHE
193
B
LEU
194
n
166
LEU
194
B
TYR
195
n
167
TYR
195
B
ALA
196
n
168
ALA
196
B
TYR
197
n
169
TYR
197
B
SER
198
n
170
SER
198
B
THR
199
n
171
THR
199
B
ALA
200
n
172
ALA
200
B
PRO
201
n
173
PRO
201
B
GLY
202
n
174
GLY
202
B
TYR
203
n
175
TYR
203
B
TYR
204
n
176
TYR
204
B
SER
205
n
177
SER
205
B
TRP
206
n
178
TRP
206
B
ARG
207
n
179
ARG
207
B
ASN
208
n
180
ASN
208
B
SER
209
n
181
SER
209
B
LYS
210
n
182
LYS
210
B
ASP
211
n
183
ASP
211
B
GLY
212
n
184
GLY
212
B
SER
213
n
185
SER
213
B
TRP
214
n
186
TRP
214
B
PHE
215
n
187
PHE
215
B
ILE
216
n
188
ILE
216
B
GLN
217
n
189
GLN
217
B
SER
218
n
190
SER
218
B
LEU
219
n
191
LEU
219
B
CYS
220
n
192
CYS
220
B
ALA
221
n
193
ALA
221
B
MET
222
n
194
MET
222
B
LEU
223
n
195
LEU
223
B
LYS
224
n
196
LYS
224
B
GLN
225
n
197
GLN
225
B
TYR
226
n
198
TYR
226
B
ALA
227
n
199
ALA
227
B
ASP
228
n
200
ASP
228
B
LYS
229
n
201
LYS
229
B
LEU
230
n
202
LEU
230
B
GLU
231
n
203
GLU
231
B
PHE
232
n
204
PHE
232
B
MET
233
n
205
MET
233
B
HIS
234
n
206
HIS
234
B
ILE
235
n
207
ILE
235
B
LEU
236
n
208
LEU
236
B
THR
237
n
209
THR
237
B
ARG
238
n
210
ARG
238
B
VAL
239
n
211
VAL
239
B
ASN
240
n
212
ASN
240
B
ARG
241
n
213
ARG
241
B
LYS
242
n
214
LYS
242
B
VAL
243
n
215
VAL
243
B
ALA
244
n
216
ALA
244
B
THR
245
n
217
THR
245
B
GLU
246
n
218
GLU
246
B
PHE
247
n
219
PHE
247
B
GLU
248
n
220
GLU
248
B
SER
249
n
221
SER
249
B
PHE
250
n
222
PHE
250
B
SER
251
n
223
SER
251
B
PHE
252
n
224
PHE
252
B
ASP
253
n
225
ASP
253
B
ALA
254
n
226
ALA
254
B
THR
255
n
227
THR
255
B
PHE
256
n
228
PHE
256
B
HIS
257
n
229
HIS
257
B
ALA
258
n
230
ALA
258
B
LYS
259
n
231
LYS
259
B
LYS
260
n
232
LYS
260
B
GLN
261
n
233
GLN
261
B
ILE
262
n
234
ILE
262
B
PRO
263
n
235
PRO
263
B
CYS
264
n
236
CYS
264
B
ILE
265
n
237
ILE
265
B
VAL
266
n
238
VAL
266
B
SER
267
n
239
SER
267
B
MET
268
n
240
MET
268
B
LEU
269
n
241
LEU
269
B
THR
270
n
242
THR
270
B
LYS
271
n
243
LYS
271
B
GLU
272
n
244
GLU
272
B
LEU
273
n
245
LEU
273
B
TYR
274
n
246
TYR
274
B
PHE
275
n
247
PHE
275
B
TYR
276
n
248
TYR
276
B
HIS
277
n
249
HIS
277
B
author_and_software_defined_assembly
PISA
2
dimeric
6380
-33
19260
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
LYS
88
A
O
LYS
60
A
N
ASN
51
A
N
ASN
23
A
N
ILE
48
A
N
ILE
20
A
O
VAL
117
A
O
VAL
89
A
N
PHE
114
A
N
PHE
86
A
O
LEU
157
A
O
LEU
129
A
N
PHE
158
A
N
PHE
130
A
O
LEU
194
A
O
LEU
166
A
N
TYR
195
A
N
TYR
167
A
O
VAL
266
A
O
VAL
238
A
N
SER
267
A
N
SER
239
B
O
ILE
265
B
O
ILE
237
B
O
VAL
266
B
O
VAL
238
B
N
TYR
195
B
N
TYR
167
B
O
LEU
194
B
O
LEU
166
B
N
PHE
158
B
N
PHE
130
B
O
LEU
157
B
O
LEU
129
B
N
PHE
114
B
N
PHE
86
B
O
VAL
117
B
O
VAL
89
B
N
ILE
48
B
N
ILE
20
B
N
ASN
51
B
N
ASN
23
B
O
LYS
88
B
O
LYS
60
A
N
GLU
123
A
N
GLU
95
A
O
ILE
126
A
O
ILE
98
A
N
GLY
129
A
N
GLY
101
A
O
GLY
132
A
O
GLY
104
A
N
ILE
172
A
N
ILE
144
B
O
ILE
187
B
O
ILE
159
A
N
ILE
187
A
N
ILE
159
B
O
ILE
172
B
O
ILE
144
A
N
ASN
208
A
N
ASN
180
A
O
GLY
212
A
O
GLY
184
B
N
GLU
123
B
N
GLU
95
B
O
ILE
126
B
O
ILE
98
B
N
GLY
129
B
N
GLY
101
B
O
GLY
132
B
O
GLY
104
B
N
ASN
208
B
N
ASN
180
B
O
GLY
212
B
O
GLY
184
1
A
SER
29
A
SER
1
1
Y
1
A
GLY
30
A
GLY
2
1
Y
1
A
ILE
31
A
ILE
3
1
Y
1
A
SER
32
A
SER
4
1
Y
1
A
LEU
33
A
LEU
5
1
Y
1
A
ASP
175
A
ASP
147
1
Y
1
A
SER
176
A
SER
148
1
Y
1
A
GLY
177
A
GLY
149
1
Y
1
A
VAL
178
A
VAL
150
1
Y
1
A
MET
182
A
MET
154
1
Y
1
A
ALA
183
A
ALA
155
1
Y
1
B
SER
29
B
SER
1
1
Y
1
B
GLY
30
B
GLY
2
1
Y
1
B
ILE
31
B
ILE
3
1
Y
1
B
SER
32
B
SER
4
1
Y
1
B
LEU
33
B
LEU
5
1
Y
1
B
ASP
175
B
ASP
147
1
Y
1
B
SER
176
B
SER
148
1
Y
1
B
GLY
177
B
GLY
149
1
Y
1
B
VAL
178
B
VAL
150
1
Y
1
B
MET
182
B
MET
154
1
Y
1
B
ALA
183
B
ALA
155
1
Y
1
6.58
0.90
118.30
124.88
B
B
B
CB
CG
OD2
ASP
ASP
ASP
90
90
90
N
1
A
LYS
82
77.15
32.13
1
A
ASP
180
2.61
131.51
1
A
ALA
254
-38.69
-39.10
1
A
PHE
275
-88.86
31.73
1
B
LYS
82
82.69
29.06
1
B
SER
120
-175.26
-178.33
25.794
-1.14
0.00
0.00
3.26
0.00
-2.12
0.934
0.894
0.29947
0.24113
0.24698
0.24698
2.40
20.00
2238
20098
20098
10.0
93.87
RANDOM
1
THROUGHOUT
0
0
MOLECULAR REPLACEMENT
0.80
1CP3
MAXIMUM LIKELIHOOD
MASK
2.40
20.00
100
4024
70
0
3854
0.010
0.021
4004
1.411
1.963
5384
3.502
3.000
470
16.652
15.000
740
0.094
0.200
574
0.004
0.020
3016
0.261
0.300
1831
0.157
0.500
343
0.218
0.300
29
0.077
0.500
3
3.234
2.500
2362
5.066
5.000
3810
3.657
2.500
1642
5.348
5.000
1574
1
A
1
952
X-RAY DIFFRACTION
tight positional
0.03
0.05
1
A
1
945
X-RAY DIFFRACTION
loose positional
0.18
5.00
1
A
1
952
X-RAY DIFFRACTION
tight thermal
0.09
0.50
1
A
1
945
X-RAY DIFFRACTION
loose thermal
2.23
10.00
0.396
0.322
2.449
130
1215
25
2.40
12.
1NMQ
23665
0
0
0.104
1
6.8
95.6
data scaling
d*TREK
data reduction
d*TREK
phasing
AMoRE
refinement
REFMAC
5.0
Extendend Tethering: In Situ Assembly of Inhibitors
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
A
HIS
56
A
HIS
28
HELX_P
A
GLY
60
A
GLY
32
5
1
5
A
GLY
66
A
GLY
38
HELX_P
A
LEU
81
A
LEU
53
1
2
16
A
THR
92
A
THR
64
HELX_P
A
LYS
105
A
LYS
77
1
3
14
A
LEU
136
A
LEU
108
HELX_P
A
PHE
142
A
PHE
114
1
4
7
A
TRP
214
A
TRP
186
HELX_P
A
ALA
227
A
ALA
199
1
5
14
A
GLU
231
A
GLU
203
HELX_P
A
PHE
247
A
PHE
219
1
6
17
A
ASP
253
A
ASP
225
HELX_P
A
HIS
257
A
HIS
229
5
7
5
B
HIS
56
B
HIS
28
HELX_P
B
GLY
60
B
GLY
32
5
8
5
B
GLY
66
B
GLY
38
HELX_P
B
LEU
81
B
LEU
53
1
9
16
B
THR
92
B
THR
64
HELX_P
B
LYS
105
B
LYS
77
1
10
14
B
LEU
136
B
LEU
108
HELX_P
B
PHE
142
B
PHE
114
1
11
7
B
TRP
214
B
TRP
186
HELX_P
B
ALA
227
B
ALA
199
1
12
14
B
GLU
231
B
GLU
203
HELX_P
B
PHE
247
B
PHE
219
1
13
17
B
ASP
253
B
ASP
225
HELX_P
B
HIS
257
B
HIS
229
5
14
5
covale
2.334
none
A
CYS
163
A
SG
CYS
135
1_555
A
160
1278
C
C1
160
1_555
covale
2.109
none
B
CYS
163
B
SG
CYS
135
1_555
B
160
5278
D
C1
160
1_555
APOPTOSIS, HYDROLASE
Caspase-3, Tethering, Small molecule complex, APOPTOSIS, HYDROLASE
A
B
A
B
A
ASP
34
A
ASP
6
A
THR
174
A
THR
146
3
B
ASP
34
B
ASP
6
B
THR
174
B
THR
146
3
A
HIS
185
A
HIS
157
A
HIS
277
A
HIS
249
3
B
HIS
185
B
HIS
157
B
HIS
277
B
HIS
249
3
CASP3_HUMAN
UNP
1
34
P42574
SGISLDNSYKMDYPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDLTREEIVELMRDVSKEDH
SKRSSFVCVLLSHGEEGIIFGTNGPVDLKKITNFFRGDRCRSLTGKPKLFIIQACRGTELDCGIETDSGVDDDMACHKIP
VDADFLYAYSTAPGYYSWRNSKDGSWFIQSLCAMLKQYADKLEFMHILTRVNRKVATEFESFSFDATFHAKKQIPCIVSM
LTKELYFYH
29
277
1NMQ
29
277
P42574
A
1
1
249
29
277
1NMQ
29
277
P42574
B
1
1
249
12
3
2
2
2
3
2
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLU
84
A
GLU
56
A
ASN
89
A
ASN
61
A
GLU
43
A
GLU
15
A
ASN
51
A
ASN
23
A
ARG
111
A
ARG
83
A
LEU
119
A
LEU
91
A
LYS
156
A
LYS
128
A
GLN
161
A
GLN
133
A
PHE
193
A
PHE
165
A
TYR
197
A
TYR
169
A
CYS
264
A
CYS
236
A
SER
267
A
SER
239
B
CYS
264
B
CYS
236
B
SER
267
B
SER
239
B
PHE
193
B
PHE
165
B
TYR
197
B
TYR
169
B
LYS
156
B
LYS
128
B
GLN
161
B
GLN
133
B
ARG
111
B
ARG
83
B
LEU
119
B
LEU
91
B
GLU
43
B
GLU
15
B
ASN
51
B
ASN
23
B
GLU
84
B
GLU
56
B
ASN
89
B
ASN
61
A
GLY
122
A
GLY
94
A
GLU
123
A
GLU
95
A
ILE
126
A
ILE
98
A
GLY
129
A
GLY
101
A
GLY
132
A
GLY
104
A
ASP
135
A
ASP
107
A
ILE
172
A
ILE
144
A
GLU
173
A
GLU
145
B
LYS
186
B
LYS
158
B
ILE
187
B
ILE
159
A
LYS
186
A
LYS
158
A
ILE
187
A
ILE
159
B
ILE
172
B
ILE
144
B
GLU
173
B
GLU
145
A
ARG
207
A
ARG
179
A
ASN
208
A
ASN
180
A
GLY
212
A
GLY
184
A
SER
213
A
SER
185
B
GLY
122
B
GLY
94
B
GLU
123
B
GLU
95
B
ILE
126
B
ILE
98
B
GLY
129
B
GLY
101
B
GLY
132
B
GLY
104
B
ASP
135
B
ASP
107
B
ARG
207
B
ARG
179
B
ASN
208
B
ASN
180
B
GLY
212
B
GLY
184
B
SER
213
B
SER
185
BINDING SITE FOR RESIDUE 160 A 1278
A
160
1278
Software
15
BINDING SITE FOR RESIDUE 160 B 5278
B
160
5278
Software
16
A
ARG
64
A
ARG
36
15
1_555
A
HIS
121
A
HIS
93
15
1_555
A
GLY
122
A
GLY
94
15
1_555
A
GLN
161
A
GLN
133
15
1_555
A
CYS
163
A
CYS
135
15
1_555
A
TYR
204
A
TYR
176
15
1_555
A
SER
205
A
SER
177
15
1_555
A
ARG
207
A
ARG
179
15
1_555
A
ASN
208
A
ASN
180
15
1_555
A
TRP
214
A
TRP
186
15
1_555
A
GLU
248
A
GLU
220
15
1_555
A
SER
249
A
SER
221
15
1_555
A
PHE
250
A
PHE
222
15
1_555
A
SER
251
A
SER
223
15
1_555
A
HOH
1296
E
HOH
15
1_555
B
ARG
64
B
ARG
36
16
1_555
B
HIS
121
B
HIS
93
16
1_555
B
GLY
122
B
GLY
94
16
1_555
B
GLN
161
B
GLN
133
16
1_555
B
CYS
163
B
CYS
135
16
1_555
B
TYR
204
B
TYR
176
16
1_555
B
SER
205
B
SER
177
16
1_555
B
TRP
206
B
TRP
178
16
1_555
B
ARG
207
B
ARG
179
16
1_555
B
ASN
208
B
ASN
180
16
1_555
B
TRP
214
B
TRP
186
16
1_555
B
GLU
248
B
GLU
220
16
1_555
B
SER
249
B
SER
221
16
1_555
B
PHE
250
B
PHE
222
16
1_555
B
HOH
5288
F
HOH
16
1_555
B
HOH
5293
F
HOH
16
1_555
19
orthorhombic
P 21 21 21