0.009851 0.000000 0.000000 0.000000 0.009851 0.000000 0.000000 0.000000 0.019995 0.00000 0.00000 0.00000 Ostermann, N. Segura-Pena, D. Meier, C. Veit, T. Monnerjahn, M. Konrad, M. Lavie, A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 101.515 101.515 50.012 C10 H15 N5 O10 P2 427.201 n ADENOSINE-5'-DIPHOSPHATE non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 F N2 O7 P 324.200 3'-FLUORO-3'-DEOXYTHYMIDINE MONOPHOSPHATE PHOSPHORIC ACID MONO-[3-FLUORO-5-(5-METHYL-2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN-1-YL)-TETRAHYRO-FURAN-2-YLMETHYL] ESTER non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Biochemistry BICHAW 0033 0006-2960 42 2568 2577 10.1021/bi027302t 12614151 Structures of human thymidylate kinase in complex with prodrugs: implications for the structure-based design of novel compounds 2003 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100.0 1 SINGLE WAVELENGTH M x-ray 1 0.9076 1.0 X11 EMBL/DESY, Hamburg 0.9076 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X11 24052.533 similar to THYMIDYLATE KINASE (DTMP KINASE) 2.7.4.9 R200A 1 man polymer 24.305 MAGNESIUM ION 2 syn non-polymer 324.200 3'-FLUORO-3'-DEOXYTHYMIDINE MONOPHOSPHATE 1 syn non-polymer 427.201 ADENOSINE-5'-DIPHOSPHATE 1 syn non-polymer 18.015 water 323 nat water no no GSHMAARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDHSVHLLFSANRW EQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQ ERALRCFHQLMKDTTLNWKMVDASKSIEAVHEDIRVLSEDAIATATEKPLGELWK GSHMAARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDHSVHLLFSANRW EQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQ ERALRCFHQLMKDTTLNWKMVDASKSIEAVHEDIRVLSEDAIATATEKPLGELWK A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia sample 9606 Homo sapiens 562 Escherichia coli 1 2.27 45.5 VAPOR DIFFUSION, HANGING DROP 8.0 PEG 3350, 100 mM Tris/HCl pH 8.0, 5% sterile filtered dead sea water, VAPOR DIFFUSION, HANGING DROP, temperature 293K 293 software repository Initial release Version format compliance Derived calculations Version format compliance Refinement description 1 0 2003-03-18 1 1 2008-04-29 1 2 2011-07-13 1 3 2017-10-11 RCSB Y RCSB 2003-01-12 REL REL MG MAGNESIUM ION FDM 3'-FLUORO-3'-DEOXYTHYMIDINE MONOPHOSPHATE ADP ADENOSINE-5'-DIPHOSPHATE HOH water IUM 401 2 MG MG 401 A IUM 402 2 MG MG 402 A FMP 301 3 FDM FDM 301 A ADP 302 4 ADP ADP 302 A WAT 501 5 HOH HOH 501 A WAT 502 5 HOH HOH 502 A WAT 503 5 HOH HOH 503 A WAT 504 5 HOH HOH 504 A WAT 505 5 HOH HOH 505 A WAT 506 5 HOH HOH 506 A WAT 507 5 HOH HOH 507 A WAT 508 5 HOH HOH 508 A WAT 509 5 HOH HOH 509 A WAT 510 5 HOH HOH 510 A WAT 511 5 HOH HOH 511 A WAT 512 5 HOH HOH 512 A WAT 513 5 HOH HOH 513 A WAT 514 5 HOH HOH 514 A WAT 520 5 HOH HOH 520 A WAT 521 5 HOH HOH 521 A WAT 522 5 HOH HOH 522 A WAT 523 5 HOH HOH 523 A WAT 524 5 HOH HOH 524 A WAT 525 5 HOH HOH 525 A WAT 526 5 HOH HOH 526 A WAT 527 5 HOH HOH 527 A WAT 528 5 HOH HOH 528 A WAT 529 5 HOH HOH 529 A WAT 530 5 HOH HOH 530 A WAT 531 5 HOH HOH 531 A WAT 532 5 HOH HOH 532 A WAT 533 5 HOH HOH 533 A WAT 534 5 HOH HOH 534 A WAT 535 5 HOH HOH 535 A WAT 536 5 HOH HOH 536 A WAT 537 5 HOH HOH 537 A WAT 538 5 HOH HOH 538 A WAT 539 5 HOH HOH 539 A WAT 540 5 HOH HOH 540 A WAT 541 5 HOH HOH 541 A WAT 542 5 HOH HOH 542 A WAT 543 5 HOH HOH 543 A WAT 544 5 HOH HOH 544 A WAT 545 5 HOH HOH 545 A WAT 546 5 HOH HOH 546 A WAT 547 5 HOH HOH 547 A WAT 548 5 HOH HOH 548 A WAT 549 5 HOH HOH 549 A WAT 550 5 HOH HOH 550 A WAT 551 5 HOH HOH 551 A WAT 552 5 HOH HOH 552 A WAT 553 5 HOH HOH 553 A WAT 554 5 HOH HOH 554 A WAT 555 5 HOH HOH 555 A WAT 556 5 HOH HOH 556 A WAT 557 5 HOH HOH 557 A WAT 558 5 HOH HOH 558 A WAT 559 5 HOH HOH 559 A WAT 560 5 HOH HOH 560 A WAT 561 5 HOH HOH 561 A WAT 562 5 HOH HOH 562 A WAT 563 5 HOH HOH 563 A WAT 564 5 HOH HOH 564 A WAT 565 5 HOH HOH 565 A WAT 566 5 HOH HOH 566 A WAT 567 5 HOH HOH 567 A WAT 568 5 HOH HOH 568 A WAT 569 5 HOH HOH 569 A WAT 570 5 HOH HOH 570 A WAT 571 5 HOH HOH 571 A WAT 572 5 HOH HOH 572 A WAT 573 5 HOH HOH 573 A WAT 574 5 HOH HOH 574 A WAT 575 5 HOH HOH 575 A WAT 576 5 HOH HOH 576 A WAT 577 5 HOH HOH 577 A WAT 578 5 HOH HOH 578 A WAT 579 5 HOH HOH 579 A WAT 580 5 HOH HOH 580 A WAT 581 5 HOH HOH 581 A WAT 582 5 HOH HOH 582 A WAT 583 5 HOH HOH 583 A WAT 584 5 HOH HOH 584 A WAT 585 5 HOH HOH 585 A WAT 586 5 HOH HOH 586 A WAT 587 5 HOH HOH 587 A WAT 588 5 HOH HOH 588 A WAT 589 5 HOH HOH 589 A WAT 590 5 HOH HOH 590 A WAT 591 5 HOH HOH 591 A WAT 592 5 HOH HOH 592 A WAT 593 5 HOH HOH 593 A WAT 594 5 HOH HOH 594 A WAT 595 5 HOH HOH 595 A WAT 596 5 HOH HOH 596 A WAT 597 5 HOH HOH 597 A WAT 598 5 HOH HOH 598 A WAT 599 5 HOH HOH 599 A WAT 600 5 HOH HOH 600 A WAT 601 5 HOH HOH 601 A WAT 602 5 HOH HOH 602 A WAT 603 5 HOH HOH 603 A WAT 604 5 HOH HOH 604 A WAT 605 5 HOH HOH 605 A WAT 606 5 HOH HOH 606 A WAT 607 5 HOH HOH 607 A WAT 608 5 HOH HOH 608 A WAT 609 5 HOH HOH 609 A WAT 610 5 HOH HOH 610 A WAT 611 5 HOH HOH 611 A WAT 612 5 HOH HOH 612 A WAT 613 5 HOH HOH 613 A WAT 614 5 HOH HOH 614 A WAT 615 5 HOH HOH 615 A WAT 616 5 HOH HOH 616 A WAT 617 5 HOH HOH 617 A WAT 618 5 HOH HOH 618 A WAT 619 5 HOH HOH 619 A WAT 620 5 HOH HOH 620 A WAT 621 5 HOH HOH 621 A WAT 622 5 HOH HOH 622 A WAT 623 5 HOH HOH 623 A WAT 624 5 HOH HOH 624 A WAT 625 5 HOH HOH 625 A WAT 626 5 HOH HOH 626 A WAT 627 5 HOH HOH 627 A WAT 628 5 HOH HOH 628 A WAT 629 5 HOH HOH 629 A WAT 630 5 HOH HOH 630 A WAT 631 5 HOH HOH 631 A WAT 632 5 HOH HOH 632 A WAT 633 5 HOH HOH 633 A WAT 634 5 HOH HOH 634 A WAT 635 5 HOH HOH 635 A WAT 636 5 HOH HOH 636 A WAT 637 5 HOH HOH 637 A WAT 638 5 HOH HOH 638 A WAT 639 5 HOH HOH 639 A WAT 640 5 HOH HOH 640 A WAT 641 5 HOH HOH 641 A WAT 642 5 HOH HOH 642 A WAT 643 5 HOH HOH 643 A WAT 644 5 HOH HOH 644 A WAT 645 5 HOH HOH 645 A WAT 646 5 HOH HOH 646 A WAT 647 5 HOH HOH 647 A WAT 648 5 HOH HOH 648 A WAT 649 5 HOH HOH 649 A WAT 650 5 HOH HOH 650 A WAT 651 5 HOH HOH 651 A WAT 652 5 HOH HOH 652 A WAT 653 5 HOH HOH 653 A WAT 654 5 HOH HOH 654 A WAT 655 5 HOH HOH 655 A WAT 656 5 HOH HOH 656 A WAT 657 5 HOH HOH 657 A WAT 658 5 HOH HOH 658 A WAT 659 5 HOH HOH 659 A WAT 660 5 HOH HOH 660 A WAT 661 5 HOH HOH 661 A WAT 662 5 HOH HOH 662 A WAT 663 5 HOH HOH 663 A WAT 664 5 HOH HOH 664 A WAT 665 5 HOH HOH 665 A WAT 666 5 HOH HOH 666 A WAT 667 5 HOH HOH 667 A WAT 668 5 HOH HOH 668 A WAT 669 5 HOH HOH 669 A WAT 670 5 HOH HOH 670 A WAT 671 5 HOH HOH 671 A WAT 672 5 HOH HOH 672 A WAT 673 5 HOH HOH 673 A WAT 674 5 HOH HOH 674 A WAT 675 5 HOH HOH 675 A WAT 676 5 HOH HOH 676 A WAT 677 5 HOH HOH 677 A WAT 678 5 HOH HOH 678 A WAT 679 5 HOH HOH 679 A WAT 680 5 HOH HOH 680 A WAT 681 5 HOH HOH 681 A WAT 682 5 HOH HOH 682 A WAT 683 5 HOH HOH 683 A WAT 684 5 HOH HOH 684 A WAT 685 5 HOH HOH 685 A WAT 686 5 HOH HOH 686 A WAT 687 5 HOH HOH 687 A WAT 688 5 HOH HOH 688 A WAT 689 5 HOH HOH 689 A WAT 690 5 HOH HOH 690 A WAT 691 5 HOH HOH 691 A WAT 692 5 HOH HOH 692 A WAT 693 5 HOH HOH 693 A WAT 694 5 HOH HOH 694 A WAT 695 5 HOH HOH 695 A WAT 696 5 HOH HOH 696 A WAT 697 5 HOH HOH 697 A WAT 698 5 HOH HOH 698 A WAT 699 5 HOH HOH 699 A WAT 700 5 HOH HOH 700 A WAT 701 5 HOH HOH 701 A WAT 702 5 HOH HOH 702 A WAT 703 5 HOH HOH 703 A WAT 704 5 HOH HOH 704 A WAT 705 5 HOH HOH 705 A WAT 706 5 HOH HOH 706 A WAT 707 5 HOH HOH 707 A WAT 708 5 HOH HOH 708 A WAT 709 5 HOH HOH 709 A WAT 710 5 HOH HOH 710 A WAT 711 5 HOH HOH 711 A WAT 712 5 HOH HOH 712 A WAT 713 5 HOH HOH 713 A WAT 714 5 HOH HOH 714 A WAT 715 5 HOH HOH 715 A WAT 716 5 HOH HOH 716 A WAT 717 5 HOH HOH 717 A WAT 718 5 HOH HOH 718 A WAT 719 5 HOH HOH 719 A WAT 720 5 HOH HOH 720 A WAT 721 5 HOH HOH 721 A WAT 722 5 HOH HOH 722 A WAT 723 5 HOH HOH 723 A WAT 724 5 HOH HOH 724 A WAT 725 5 HOH HOH 725 A WAT 726 5 HOH HOH 726 A WAT 727 5 HOH HOH 727 A WAT 728 5 HOH HOH 728 A WAT 729 5 HOH HOH 729 A WAT 730 5 HOH HOH 730 A WAT 731 5 HOH HOH 731 A WAT 732 5 HOH HOH 732 A WAT 733 5 HOH HOH 733 A WAT 734 5 HOH HOH 734 A WAT 735 5 HOH HOH 735 A WAT 736 5 HOH HOH 736 A WAT 737 5 HOH HOH 737 A WAT 738 5 HOH HOH 738 A WAT 739 5 HOH HOH 739 A WAT 740 5 HOH HOH 740 A WAT 741 5 HOH HOH 741 A WAT 742 5 HOH HOH 742 A WAT 744 5 HOH HOH 744 A WAT 745 5 HOH HOH 745 A WAT 746 5 HOH HOH 746 A WAT 747 5 HOH HOH 747 A WAT 748 5 HOH HOH 748 A WAT 749 5 HOH HOH 749 A WAT 750 5 HOH HOH 750 A WAT 751 5 HOH HOH 751 A WAT 752 5 HOH HOH 752 A WAT 753 5 HOH HOH 753 A WAT 754 5 HOH HOH 754 A WAT 756 5 HOH HOH 756 A WAT 757 5 HOH HOH 757 A WAT 758 5 HOH HOH 758 A WAT 759 5 HOH HOH 759 A WAT 760 5 HOH HOH 760 A WAT 761 5 HOH HOH 761 A WAT 762 5 HOH HOH 762 A WAT 763 5 HOH HOH 763 A WAT 764 5 HOH HOH 764 A WAT 765 5 HOH HOH 765 A WAT 766 5 HOH HOH 766 A WAT 767 5 HOH HOH 767 A WAT 768 5 HOH HOH 768 A WAT 769 5 HOH HOH 769 A WAT 770 5 HOH HOH 770 A WAT 771 5 HOH HOH 771 A WAT 772 5 HOH HOH 772 A WAT 773 5 HOH HOH 773 A WAT 774 5 HOH HOH 774 A WAT 775 5 HOH HOH 775 A WAT 776 5 HOH HOH 776 A WAT 777 5 HOH HOH 777 A WAT 778 5 HOH HOH 778 A WAT 779 5 HOH HOH 779 A WAT 780 5 HOH HOH 780 A WAT 781 5 HOH HOH 781 A WAT 782 5 HOH HOH 782 A WAT 783 5 HOH HOH 783 A WAT 784 5 HOH HOH 784 A WAT 785 5 HOH HOH 785 A WAT 786 5 HOH HOH 786 A WAT 787 5 HOH HOH 787 A WAT 788 5 HOH HOH 788 A WAT 789 5 HOH HOH 789 A WAT 790 5 HOH HOH 790 A WAT 791 5 HOH HOH 791 A WAT 792 5 HOH HOH 792 A WAT 793 5 HOH HOH 793 A WAT 794 5 HOH HOH 794 A WAT 795 5 HOH HOH 795 A WAT 796 5 HOH HOH 796 A WAT 798 5 HOH HOH 798 A WAT 799 5 HOH HOH 799 A WAT 800 5 HOH HOH 800 A WAT 801 5 HOH HOH 801 A WAT 802 5 HOH HOH 802 A WAT 803 5 HOH HOH 803 A WAT 804 5 HOH HOH 804 A WAT 805 5 HOH HOH 805 A WAT 806 5 HOH HOH 806 A WAT 807 5 HOH HOH 807 A WAT 808 5 HOH HOH 808 A WAT 809 5 HOH HOH 809 A WAT 810 5 HOH HOH 810 A WAT 811 5 HOH HOH 811 A WAT 812 5 HOH HOH 812 A WAT 813 5 HOH HOH 813 A WAT 814 5 HOH HOH 814 A WAT 815 5 HOH HOH 815 A WAT 816 5 HOH HOH 816 A WAT 818 5 HOH HOH 818 A WAT 819 5 HOH HOH 819 A WAT 820 5 HOH HOH 820 A WAT 821 5 HOH HOH 821 A WAT 822 5 HOH HOH 822 A WAT 823 5 HOH HOH 823 A WAT 824 5 HOH HOH 824 A WAT 825 5 HOH HOH 825 A WAT 826 5 HOH HOH 826 A WAT 827 5 HOH HOH 827 A WAT 828 5 HOH HOH 828 A WAT 829 5 HOH HOH 829 A WAT 830 5 HOH HOH 830 A WAT 831 5 HOH HOH 831 A WAT 832 5 HOH HOH 832 A n 1 -2 A n 2 -1 A n 3 0 A n 4 1 A n 5 2 A ALA 3 n 6 ALA 3 A ARG 4 n 7 ARG 4 A ARG 5 n 8 ARG 5 A GLY 6 n 9 GLY 6 A ALA 7 n 10 ALA 7 A LEU 8 n 11 LEU 8 A ILE 9 n 12 ILE 9 A VAL 10 n 13 VAL 10 A LEU 11 n 14 LEU 11 A GLU 12 n 15 GLU 12 A GLY 13 n 16 GLY 13 A VAL 14 n 17 VAL 14 A ASP 15 n 18 ASP 15 A ARG 16 n 19 ARG 16 A ALA 17 n 20 ALA 17 A GLY 18 n 21 GLY 18 A LYS 19 n 22 LYS 19 A SER 20 n 23 SER 20 A THR 21 n 24 THR 21 A GLN 22 n 25 GLN 22 A SER 23 n 26 SER 23 A ARG 24 n 27 ARG 24 A LYS 25 n 28 LYS 25 A LEU 26 n 29 LEU 26 A VAL 27 n 30 VAL 27 A GLU 28 n 31 GLU 28 A ALA 29 n 32 ALA 29 A LEU 30 n 33 LEU 30 A CYS 31 n 34 CYS 31 A ALA 32 n 35 ALA 32 A ALA 33 n 36 ALA 33 A GLY 34 n 37 GLY 34 A HIS 35 n 38 HIS 35 A ARG 36 n 39 ARG 36 A ALA 37 n 40 ALA 37 A GLU 38 n 41 GLU 38 A LEU 39 n 42 LEU 39 A LEU 40 n 43 LEU 40 A ARG 41 n 44 ARG 41 A PHE 42 n 45 PHE 42 A PRO 43 n 46 PRO 43 A GLU 44 n 47 GLU 44 A ARG 45 n 48 ARG 45 A SER 46 n 49 SER 46 A THR 47 n 50 THR 47 A GLU 48 n 51 GLU 48 A ILE 49 n 52 ILE 49 A GLY 50 n 53 GLY 50 A LYS 51 n 54 LYS 51 A LEU 52 n 55 LEU 52 A LEU 53 n 56 LEU 53 A SER 54 n 57 SER 54 A SER 55 n 58 SER 55 A TYR 56 n 59 TYR 56 A LEU 57 n 60 LEU 57 A GLN 58 n 61 GLN 58 A LYS 59 n 62 LYS 59 A LYS 60 n 63 LYS 60 A SER 61 n 64 SER 61 A ASP 62 n 65 ASP 62 A VAL 63 n 66 VAL 63 A GLU 64 n 67 GLU 64 A ASP 65 n 68 ASP 65 A HIS 66 n 69 HIS 66 A SER 67 n 70 SER 67 A VAL 68 n 71 VAL 68 A HIS 69 n 72 HIS 69 A LEU 70 n 73 LEU 70 A LEU 71 n 74 LEU 71 A PHE 72 n 75 PHE 72 A SER 73 n 76 SER 73 A ALA 74 n 77 ALA 74 A ASN 75 n 78 ASN 75 A ARG 76 n 79 ARG 76 A TRP 77 n 80 TRP 77 A GLU 78 n 81 GLU 78 A GLN 79 n 82 GLN 79 A VAL 80 n 83 VAL 80 A PRO 81 n 84 PRO 81 A LEU 82 n 85 LEU 82 A ILE 83 n 86 ILE 83 A LYS 84 n 87 LYS 84 A GLU 85 n 88 GLU 85 A LYS 86 n 89 LYS 86 A LEU 87 n 90 LEU 87 A SER 88 n 91 SER 88 A GLN 89 n 92 GLN 89 A GLY 90 n 93 GLY 90 A VAL 91 n 94 VAL 91 A THR 92 n 95 THR 92 A LEU 93 n 96 LEU 93 A VAL 94 n 97 VAL 94 A VAL 95 n 98 VAL 95 A ASP 96 n 99 ASP 96 A ARG 97 n 100 ARG 97 A TYR 98 n 101 TYR 98 A ALA 99 n 102 ALA 99 A PHE 100 n 103 PHE 100 A SER 101 n 104 SER 101 A GLY 102 n 105 GLY 102 A VAL 103 n 106 VAL 103 A ALA 104 n 107 ALA 104 A PHE 105 n 108 PHE 105 A THR 106 n 109 THR 106 A GLY 107 n 110 GLY 107 A ALA 108 n 111 ALA 108 A LYS 109 n 112 LYS 109 A GLU 110 n 113 GLU 110 A ASN 111 n 114 ASN 111 A PHE 112 n 115 PHE 112 A SER 113 n 116 SER 113 A LEU 114 n 117 LEU 114 A ASP 115 n 118 ASP 115 A TRP 116 n 119 TRP 116 A CYS 117 n 120 CYS 117 A LYS 118 n 121 LYS 118 A GLN 119 n 122 GLN 119 A PRO 120 n 123 PRO 120 A ASP 121 n 124 ASP 121 A VAL 122 n 125 VAL 122 A GLY 123 n 126 GLY 123 A LEU 124 n 127 LEU 124 A PRO 125 n 128 PRO 125 A LYS 126 n 129 LYS 126 A PRO 127 n 130 PRO 127 A ASP 128 n 131 ASP 128 A LEU 129 n 132 LEU 129 A VAL 130 n 133 VAL 130 A LEU 131 n 134 LEU 131 A PHE 132 n 135 PHE 132 A LEU 133 n 136 LEU 133 A GLN 134 n 137 GLN 134 A LEU 135 n 138 LEU 135 A GLN 136 n 139 GLN 136 A LEU 137 n 140 LEU 137 A ALA 138 n 141 ALA 138 A ASP 139 n 142 ASP 139 A ALA 140 n 143 ALA 140 A ALA 141 n 144 ALA 141 A LYS 142 n 145 LYS 142 A ARG 143 n 146 ARG 143 A GLY 144 n 147 GLY 144 A ALA 145 n 148 ALA 145 A PHE 146 n 149 PHE 146 A GLY 147 n 150 GLY 147 A ALA 148 n 151 HIS 148 A GLU 149 n 152 GLU 149 A ARG 150 n 153 ARG 150 A TYR 151 n 154 TYR 151 A GLU 152 n 155 GLU 152 A ASN 153 n 156 ASN 153 A GLY 154 n 157 GLY 154 A ALA 155 n 158 ALA 155 A PHE 156 n 159 PHE 156 A GLN 157 n 160 GLN 157 A GLU 158 n 161 GLU 158 A ARG 159 n 162 ARG 159 A ALA 160 n 163 ALA 160 A LEU 161 n 164 LEU 161 A ARG 162 n 165 ARG 162 A CYS 163 n 166 CYS 163 A PHE 164 n 167 PHE 164 A HIS 165 n 168 HIS 165 A GLN 166 n 169 GLN 166 A LEU 167 n 170 LEU 167 A MET 168 n 171 MET 168 A LYS 169 n 172 LYS 169 A ASP 170 n 173 ASP 170 A THR 171 n 174 THR 171 A THR 172 n 175 THR 172 A LEU 173 n 176 LEU 173 A ASN 174 n 177 ASN 174 A TRP 175 n 178 TRP 175 A LYS 176 n 179 LYS 176 A MET 177 n 180 MET 177 A VAL 178 n 181 VAL 178 A ASP 179 n 182 ASP 179 A ALA 180 n 183 ALA 180 A SER 181 n 184 SER 181 A LYS 182 n 185 LYS 182 A SER 183 n 186 SER 183 A ILE 184 n 187 ILE 184 A GLU 185 n 188 GLU 185 A ALA 186 n 189 ALA 186 A VAL 187 n 190 VAL 187 A HIS 188 n 191 HIS 188 A GLU 189 n 192 GLU 189 A ASP 190 n 193 ASP 190 A ILE 191 n 194 ILE 191 A ARG 192 n 195 ARG 192 A VAL 193 n 196 VAL 193 A LEU 194 n 197 LEU 194 A SER 195 n 198 SER 195 A GLU 196 n 199 GLU 196 A ASP 197 n 200 ASP 197 A ALA 198 n 201 ALA 198 A ILE 199 n 202 ILE 199 A ALA 200 n 203 ALA 200 A THR 201 n 204 THR 201 A ALA 202 n 205 ALA 202 A THR 203 n 206 THR 203 A GLU 204 n 207 GLU 204 A ALA 205 n 208 LYS 205 A PRO 206 n 209 PRO 206 A LEU 207 n 210 LEU 207 A GLY 208 n 211 GLY 208 A GLU 209 n 212 GLU 209 A LEU 210 n 213 LEU 210 A TRP 211 n 214 TRP 211 A LYS 212 n 215 LYS 212 A author_and_software_defined_assembly PISA,PQS 2 dimeric 4710 -65 17830 A SER 20 A OG SER 23 1_555 A MG 401 B MG MG 1_555 A ADP 302 E O2B ADP 1_555 91.1 A SER 20 A OG SER 23 1_555 A MG 401 B MG MG 1_555 A HOH 504 F O HOH 1_555 85.5 A ADP 302 E O2B ADP 1_555 A MG 401 B MG MG 1_555 A HOH 504 F O HOH 1_555 96.6 A SER 20 A OG SER 23 1_555 A MG 401 B MG MG 1_555 A HOH 505 F O HOH 1_555 88.0 A ADP 302 E O2B ADP 1_555 A MG 401 B MG MG 1_555 A HOH 505 F O HOH 1_555 176.3 A HOH 504 F O HOH 1_555 A MG 401 B MG MG 1_555 A HOH 505 F O HOH 1_555 86.9 A SER 20 A OG SER 23 1_555 A MG 401 B MG MG 1_555 A HOH 506 F O HOH 1_555 93.3 A ADP 302 E O2B ADP 1_555 A MG 401 B MG MG 1_555 A HOH 506 F O HOH 1_555 89.8 A HOH 504 F O HOH 1_555 A MG 401 B MG MG 1_555 A HOH 506 F O HOH 1_555 173.4 A HOH 505 F O HOH 1_555 A MG 401 B MG MG 1_555 A HOH 506 F O HOH 1_555 86.6 A SER 20 A OG SER 23 1_555 A MG 401 B MG MG 1_555 A HOH 507 F O HOH 1_555 175.5 A ADP 302 E O2B ADP 1_555 A MG 401 B MG MG 1_555 A HOH 507 F O HOH 1_555 91.1 A HOH 504 F O HOH 1_555 A MG 401 B MG MG 1_555 A HOH 507 F O HOH 1_555 90.4 A HOH 505 F O HOH 1_555 A MG 401 B MG MG 1_555 A HOH 507 F O HOH 1_555 90.1 A HOH 506 F O HOH 1_555 A MG 401 B MG MG 1_555 A HOH 507 F O HOH 1_555 90.6 A HOH 501 F O HOH 1_555 A MG 402 C MG MG 1_555 A HOH 502 F O HOH 1_555 90.2 A HOH 501 F O HOH 1_555 A MG 402 C MG MG 1_555 A HOH 503 F O HOH 1_555 97.5 A HOH 502 F O HOH 1_555 A MG 402 C MG MG 1_555 A HOH 503 F O HOH 1_555 90.9 A HOH 501 F O HOH 1_555 A MG 402 C MG MG 1_555 A HOH 501 F O HOH 8_665 176.2 A HOH 502 F O HOH 1_555 A MG 402 C MG MG 1_555 A HOH 501 F O HOH 8_665 86.1 A HOH 503 F O HOH 1_555 A MG 402 C MG MG 1_555 A HOH 501 F O HOH 8_665 83.4 A HOH 501 F O HOH 1_555 A MG 402 C MG MG 1_555 A HOH 502 F O HOH 8_665 91.4 A HOH 502 F O HOH 1_555 A MG 402 C MG MG 1_555 A HOH 502 F O HOH 8_665 86.4 A HOH 503 F O HOH 1_555 A MG 402 C MG MG 1_555 A HOH 502 F O HOH 8_665 170.7 A HOH 501 F O HOH 8_665 A MG 402 C MG MG 1_555 A HOH 502 F O HOH 8_665 87.6 A HOH 501 F O HOH 1_555 A MG 402 C MG MG 1_555 A HOH 503 F O HOH 8_665 88.9 A HOH 502 F O HOH 1_555 A MG 402 C MG MG 1_555 A HOH 503 F O HOH 8_665 179.0 A HOH 503 F O HOH 1_555 A MG 402 C MG MG 1_555 A HOH 503 F O HOH 8_665 88.7 A HOH 501 F O HOH 8_665 A MG 402 C MG MG 1_555 A HOH 503 F O HOH 8_665 94.7 A HOH 502 F O HOH 8_665 A MG 402 C MG MG 1_555 A HOH 503 F O HOH 8_665 94.1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 8_665 -y+1,-x+1,-z+1/2 crystal symmetry operation 101.5150000000 101.5150000000 25.0060000000 A N LEU 40 A N LEU 43 A O VAL 94 A O VAL 97 A O LEU 93 A O LEU 96 A N ILE 9 A N ILE 12 A N VAL 10 A N VAL 13 A O LEU 131 A O LEU 134 A N GLN 134 A N GLN 137 A O VAL 178 A O VAL 181 1 A MG 402 C MG 1 A CG HIS 148 A CG HIS 151 1 Y 1 A ND1 HIS 148 A ND1 HIS 151 1 Y 1 A CD2 HIS 148 A CD2 HIS 151 1 Y 1 A CE1 HIS 148 A CE1 HIS 151 1 Y 1 A NE2 HIS 148 A NE2 HIS 151 1 Y 1 A CG LYS 205 A CG LYS 208 1 Y 1 A CD LYS 205 A CD LYS 208 1 Y 1 A CE LYS 205 A CE LYS 208 1 Y 1 A NZ LYS 205 A NZ LYS 208 1 Y 1 A GLY -2 A GLY 1 1 Y 1 A SER -1 A SER 2 1 Y 1 A HIS 0 A HIS 3 1 Y 1 A MET 1 A MET 4 1 Y 1 A ALA 2 A ALA 5 1 Y 1 A A OE1 O GLN HOH 157 514 1.95 1 A A NE2 O GLN HOH 166 726 2.04 1 A A O O HOH HOH 655 813 2.06 1 A A O O HOH HOH 531 768 2.06 1 A A O O HOH HOH 510 512 2.07 1 A A O O HOH HOH 693 770 2.08 1 A A O O HOH HOH 682 684 2.11 1 A A O O HOH HOH 791 792 2.12 1 A A O O HOH HOH 794 795 2.15 1 A A O O HOH HOH 633 809 2.17 1 10.94 1.40 123.60 134.54 A A A CD NE CZ ARG ARG ARG 4 4 4 N 1 5.06 0.50 120.30 125.36 A A A NE CZ NH1 ARG ARG ARG 4 4 4 N 1 -3.28 0.50 120.30 117.02 A A A NE CZ NH2 ARG ARG ARG 5 5 5 N 1 6.49 0.90 118.30 124.79 A A A CB CG OD1 ASP ASP ASP 15 15 15 N 1 -3.83 0.50 120.30 116.47 A A A NE CZ NH1 ARG ARG ARG 16 16 16 N 1 -4.79 0.50 120.30 115.51 A A A NE CZ NH2 ARG ARG ARG 24 24 24 N 1 -4.26 0.50 120.30 116.04 A A A NE CZ NH2 ARG ARG ARG 36 36 36 N 1 3.05 0.50 120.30 123.35 A A A NE CZ NH1 ARG ARG ARG 45 45 45 N 1 -3.05 0.50 120.30 117.25 A A A NE CZ NH2 ARG ARG ARG 45 45 45 N 1 3.44 0.50 120.30 123.74 A A A NE CZ NH1 ARG ARG ARG 97 97 97 N 1 -3.59 0.50 120.30 116.71 A A A NE CZ NH2 ARG ARG ARG 192 192 192 N 1 A A O O HOH HOH 727 795 1.94 1_555 8_665 1 A A O O HOH HOH 783 783 2.04 1_555 8_665 1 A ARG 97 74.72 148.98 1 A TYR 98 -149.26 -147.33 1 A PHE 146 -56.18 -179.49 0.228 0.183 1.7 32.1 2842 28602 28602 random 1 0 FOURIER SYNTHESIS 1.7 32.1 323 2023 50 0 1650 1.7 32.1 1NMX 28602 0.08 1 10.6 4.8 97.5 1.7 1.8 3.94 0.283 1 4.7 99.3 data collection MAR345 data reduction XDS refinement REFMAC data scaling XDS similar to THYMIDYLATE KINASE (DTMP KINASE), 3'-FLUORO-3'-DEOXYTHYMIDINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE Crystal structure of human thymidylate kinase with FLTMP and ADP 1 N N 2 N N 2 N N 3 N N 4 N N 5 N N A GLY 18 A GLY 21 HELX_P A ALA 33 A ALA 36 1 1 16 A THR 47 A THR 50 HELX_P A GLN 58 A GLN 61 1 2 12 A GLU 64 A GLU 67 HELX_P A GLU 78 A GLU 81 1 3 15 A GLN 79 A GLN 82 HELX_P A GLN 89 A GLN 92 1 4 11 A TYR 98 A TYR 101 HELX_P A ALA 108 A ALA 111 1 5 11 A SER 113 A SER 116 HELX_P A GLN 119 A GLN 122 1 6 7 A PRO 120 A PRO 123 HELX_P A VAL 122 A VAL 125 5 7 3 A GLN 136 A GLN 139 HELX_P A LYS 142 A LYS 145 1 8 7 A ASN 153 A ASN 156 HELX_P A MET 168 A MET 171 1 9 16 A SER 183 A SER 186 HELX_P A THR 203 A THR 206 1 10 21 metalc 2.079 A MG 401 B MG MG 1_555 A SER 20 A OG SER 23 1_555 metalc 2.052 A MG 401 B MG MG 1_555 A ADP 302 E O2B ADP 1_555 metalc 2.198 A MG 401 B MG MG 1_555 A HOH 504 F O HOH 1_555 metalc 2.064 A MG 401 B MG MG 1_555 A HOH 505 F O HOH 1_555 metalc 2.071 A MG 401 B MG MG 1_555 A HOH 506 F O HOH 1_555 metalc 2.130 A MG 401 B MG MG 1_555 A HOH 507 F O HOH 1_555 metalc 2.121 A MG 402 C MG MG 1_555 A HOH 501 F O HOH 1_555 metalc 2.211 A MG 402 C MG MG 1_555 A HOH 502 F O HOH 1_555 metalc 2.102 A MG 402 C MG MG 1_555 A HOH 503 F O HOH 1_555 metalc 2.273 A MG 402 C MG MG 1_555 A HOH 501 F O HOH 8_665 metalc 2.160 A MG 402 C MG MG 1_555 A HOH 502 F O HOH 8_665 metalc 2.037 A MG 402 C MG MG 1_555 A HOH 503 F O HOH 8_665 TRANSFERASE thymidylate kinase, p-loop, fluorothymidine, TRANSFERASE A PHE 42 A PHE 45 1 A PRO 43 A PRO 46 -1.39 DTYMK_HUMAN UNP 1 1 P23919 MAARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDHSVHLLFSANRWEQV PLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERA LRCFHQLMKDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRTATEKPLGELWK 1 212 1NMX 1 212 P23919 A 1 4 215 1 CLONING ARTIFACT GLY -2 1NMX A P23919 UNP 1 1 CLONING ARTIFACT SER -1 1NMX A P23919 UNP 2 1 CLONING ARTIFACT HIS 0 1NMX A P23919 UNP 3 1 ARG ENGINEERED ALA 200 1NMX A P23919 UNP 200 203 5 parallel parallel parallel parallel A ALA 37 A ALA 40 A ARG 41 A ARG 44 A THR 92 A THR 95 A ASP 96 A ASP 99 A LEU 8 A LEU 11 A GLY 13 A GLY 16 A LEU 129 A LEU 132 A GLN 134 A GLN 137 A TRP 175 A TRP 178 A ASP 179 A ASP 182 BINDING SITE FOR RESIDUE MG A 401 Software 6 BINDING SITE FOR RESIDUE MG A 402 Software 6 BINDING SITE FOR RESIDUE FDM A 301 Software 16 BINDING SITE FOR RESIDUE ADP A 302 Software 24 A SER 20 A SER 23 6 1_555 A ADP 302 E ADP 6 1_555 A HOH 504 F HOH 6 1_555 A HOH 505 F HOH 6 1_555 A HOH 506 F HOH 6 1_555 A HOH 507 F HOH 6 1_555 A HOH 501 F HOH 6 1_555 A HOH 501 F HOH 6 8_665 A HOH 502 F HOH 6 8_665 A HOH 502 F HOH 6 1_555 A HOH 503 F HOH 6 1_555 A HOH 503 F HOH 6 8_665 A PHE 42 A PHE 45 16 1_555 A PHE 72 A PHE 75 16 1_555 A ARG 76 A ARG 79 16 1_555 A ARG 97 A ARG 100 16 1_555 A GLY 102 A GLY 105 16 1_555 A PHE 105 A PHE 108 16 1_555 A TYR 151 A TYR 154 16 1_555 A HOH 504 F HOH 16 1_555 A HOH 505 F HOH 16 1_555 A HOH 507 F HOH 16 1_555 A HOH 509 F HOH 16 1_555 A HOH 529 F HOH 16 1_555 A HOH 555 F HOH 16 1_555 A HOH 641 F HOH 16 1_555 A HOH 684 F HOH 16 1_555 A HOH 699 F HOH 16 1_555 A ARG 16 A ARG 19 24 1_555 A ALA 17 A ALA 20 24 1_555 A GLY 18 A GLY 21 24 1_555 A LYS 19 A LYS 22 24 1_555 A SER 20 A SER 23 24 1_555 A THR 21 A THR 24 24 1_555 A ARG 143 A ARG 146 24 1_555 A LYS 182 A LYS 185 24 1_555 A SER 183 A SER 186 24 1_555 A ILE 184 A ILE 187 24 1_555 A ARG 192 A ARG 195 24 4_455 A MG 401 B MG 24 1_555 A HOH 506 F HOH 24 1_555 A HOH 507 F HOH 24 1_555 A HOH 508 F HOH 24 1_555 A HOH 538 F HOH 24 1_555 A HOH 574 F HOH 24 1_555 A HOH 583 F HOH 24 1_555 A HOH 592 F HOH 24 1_555 A HOH 622 F HOH 24 1_555 A HOH 649 F HOH 24 1_555 A HOH 654 F HOH 24 1_555 A HOH 681 F HOH 24 1_555 A HOH 770 F HOH 24 4_455 96 P 43 21 2