0.008772 0.000000 0.000000 0.000000 0.008525 0.000000 0.000000 0.000000 0.009440 0.00000 0.00000 0.00000 Morais, M.C. Kanamaru, S. Badasso, M.O. Koti, J.S. Owen, B.L. McMurray, C.T. L Anderson, D. Rossmann, M.G. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 32 90.00 90.00 90.00 114.005 117.301 105.933 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N N N 145 S C N 146 N C N 147 N O N 148 S C N 149 N C N 150 N C N 151 N C N 152 N O N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N N N 167 S C N 168 N C N 169 N O N 170 N C N 171 N C N 172 N C N 173 N C N 174 N O N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N N N 189 S C N 190 N C N 191 N O N 192 N C N 193 N C N 194 N C N 195 N C N 196 N N N 197 N O N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N N N 214 S C N 215 N C N 216 N O N 217 N C Y 218 N C Y 219 N C Y 220 N C Y 221 N C Y 222 N C Y 223 N C N 224 N O N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N N N 237 S C N 238 N C N 239 N O N 240 N C N 241 N C N 242 N C N 243 N O N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N N N 254 S C N 255 N C N 256 N O N 257 N C N 258 N O N 259 N O N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N N N 268 S C N 269 N C N 270 N O N 271 R C N 272 N O N 273 N C N 274 N O N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N N N 285 S C N 286 N C N 287 N O N 288 N C Y 289 N C Y 290 N C Y 291 N C Y 292 N C Y 293 N C Y 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N N N 309 S C N 310 N C N 311 N O N 312 N C N 313 N C N 314 N C N 315 N O N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N doub N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N doub N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N doub N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N doub N 210 N sing N 211 N sing N 212 N sing N 213 N sing Y 214 N doub Y 215 N sing Y 216 N sing N 217 N sing Y 218 N doub N 219 N sing Y 220 N doub N 221 N sing Y 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N doub N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N doub N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N doub N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N doub N 279 N sing N 280 N sing N 281 N sing N 282 N sing Y 283 N doub Y 284 N sing Y 285 N sing N 286 N sing Y 287 N doub N 288 N sing Y 289 N doub N 290 N sing Y 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N doub N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing US Nat.Struct.Biol. NSBIEW 2024 1072-8368 10 572 576 10.1038/nsb939 12778115 Bacteriophage f29 scaffolding protein gp7 before and after prohead assembly 2003 10.2210/pdb1noh/pdb pdb_00001noh 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2001-11-17 ADSC QUANTUM 4 SINGLE WAVELENGTH M x-ray 1 1.000 1.0 14-BM-C APS 1.000 SYNCHROTRON APS BEAMLINE 14-BM-C 11165.360 HEAD MORPHOGENESIS PROTEIN 4 man polymer Bacteriophage phi29 scaffolding protein gp7; LATE PROTEIN GP7; gene 7 protein' no no PLKPEEHEDILNKLLDPELAQSERTEALQQLRVNYGSFVSEYNDLTKSHEKLAAEKDDLIVSNSKLFRQIGLTEKQEEDH KKADISETITIEDLEAK PLKPEEHEDILNKLLDPELAQSERTEALQQLRVNYGSFVSEYNDLTKSHEKLAAEKDDLIVSNSKLFRQIGLTEKQEEDH KKADISETITIEDLEAK A,B,C,D polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Phi29-like viruses Escherichia sample gp7 10756 Bacillus phage phi29 562 Escherichia coli HMS174(DE3) Plasmid pARgp7 1 5.37 76.9 VAPOR DIFFUSION, HANGING DROP 6.5 14.4 % Peg 8000, 0.08 M sodium cacodylate, 0.16 M calcium acetate, 20 % glycerol, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K 298 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_ref_seq_dif repository Initial release Version format compliance Version format compliance Data collection Database references Refinement description 1 0 2003-07-01 1 1 2008-04-29 1 2 2011-07-13 1 3 2023-08-16 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details gp7 scaffolding protein before prohead assembly RCSB Y RCSB 2003-01-16 REL REL 1NO4 PDB ENTRY 1NO4 PDB experimental model PRO 2 n 1 PRO 2 A LEU 3 n 2 LEU 3 A LYS 4 n 3 LYS 4 A PRO 5 n 4 PRO 5 A GLU 6 n 5 GLU 6 A GLU 7 n 6 GLU 7 A HIS 8 n 7 HIS 8 A GLU 9 n 8 GLU 9 A ASP 10 n 9 ASP 10 A ILE 11 n 10 ILE 11 A LEU 12 n 11 LEU 12 A ASN 13 n 12 ASN 13 A LYS 14 n 13 LYS 14 A LEU 15 n 14 LEU 15 A LEU 16 n 15 LEU 16 A ASP 17 n 16 ASP 17 A PRO 18 n 17 PRO 18 A GLU 19 n 18 GLU 19 A LEU 20 n 19 LEU 20 A ALA 21 n 20 ALA 21 A GLN 22 n 21 GLN 22 A SER 23 n 22 SER 23 A GLU 24 n 23 GLU 24 A ARG 25 n 24 ARG 25 A THR 26 n 25 THR 26 A GLU 27 n 26 GLU 27 A ALA 28 n 27 ALA 28 A LEU 29 n 28 LEU 29 A GLN 30 n 29 GLN 30 A GLN 31 n 30 GLN 31 A LEU 32 n 31 LEU 32 A ARG 33 n 32 ARG 33 A VAL 34 n 33 VAL 34 A ASN 35 n 34 ASN 35 A TYR 36 n 35 TYR 36 A GLY 37 n 36 GLY 37 A SER 38 n 37 SER 38 A PHE 39 n 38 PHE 39 A VAL 40 n 39 VAL 40 A SER 41 n 40 SER 41 A GLU 42 n 41 GLU 42 A TYR 43 n 42 TYR 43 A ASN 44 n 43 ASN 44 A ASP 45 n 44 ASP 45 A LEU 46 n 45 LEU 46 A THR 47 n 46 THR 47 A LYS 48 n 47 LYS 48 A SER 49 n 48 SER 49 A HIS 50 n 49 HIS 50 A GLU 51 n 50 GLU 51 A LYS 52 n 51 LYS 52 A LEU 53 n 52 LEU 53 A ALA 54 n 53 ALA 54 A ALA 55 n 54 ALA 55 A GLU 56 n 55 GLU 56 A LYS 57 n 56 LYS 57 A ASP 58 n 57 ASP 58 A ASP 59 n 58 ASP 59 A LEU 60 n 59 LEU 60 A ILE 61 n 60 ILE 61 A VAL 62 n 61 VAL 62 A SER 63 n 62 SER 63 A ASN 64 n 63 ASN 64 A SER 65 n 64 SER 65 A LYS 66 n 65 LYS 66 A LEU 67 n 66 LEU 67 A PHE 68 n 67 PHE 68 A ARG 69 n 68 ARG 69 A GLN 70 n 69 GLN 70 A ILE 71 n 70 ILE 71 A GLY 72 n 71 GLY 72 A LEU 73 n 72 LEU 73 A THR 74 n 73 THR 74 A n 74 75 A n 75 76 A n 76 77 A n 77 78 A n 78 79 A n 79 80 A n 80 81 A n 81 82 A n 82 83 A n 83 84 A n 84 85 A n 85 86 A n 86 87 A n 87 88 A n 88 89 A n 89 90 A n 90 91 A n 91 92 A n 92 93 A n 93 94 A n 94 95 A n 95 96 A n 96 97 A n 97 98 A PRO 2 n 1 PRO 2 B LEU 3 n 2 LEU 3 B LYS 4 n 3 LYS 4 B PRO 5 n 4 PRO 5 B GLU 6 n 5 GLU 6 B GLU 7 n 6 GLU 7 B HIS 8 n 7 HIS 8 B GLU 9 n 8 GLU 9 B ASP 10 n 9 ASP 10 B ILE 11 n 10 ILE 11 B LEU 12 n 11 LEU 12 B ASN 13 n 12 ASN 13 B LYS 14 n 13 LYS 14 B LEU 15 n 14 LEU 15 B LEU 16 n 15 LEU 16 B ASP 17 n 16 ASP 17 B PRO 18 n 17 PRO 18 B GLU 19 n 18 GLU 19 B LEU 20 n 19 LEU 20 B ALA 21 n 20 ALA 21 B GLN 22 n 21 GLN 22 B SER 23 n 22 SER 23 B GLU 24 n 23 GLU 24 B ARG 25 n 24 ARG 25 B THR 26 n 25 THR 26 B GLU 27 n 26 GLU 27 B ALA 28 n 27 ALA 28 B LEU 29 n 28 LEU 29 B GLN 30 n 29 GLN 30 B GLN 31 n 30 GLN 31 B LEU 32 n 31 LEU 32 B ARG 33 n 32 ARG 33 B VAL 34 n 33 VAL 34 B ASN 35 n 34 ASN 35 B TYR 36 n 35 TYR 36 B GLY 37 n 36 GLY 37 B SER 38 n 37 SER 38 B PHE 39 n 38 PHE 39 B VAL 40 n 39 VAL 40 B SER 41 n 40 SER 41 B GLU 42 n 41 GLU 42 B TYR 43 n 42 TYR 43 B ASN 44 n 43 ASN 44 B ASP 45 n 44 ASP 45 B LEU 46 n 45 LEU 46 B THR 47 n 46 THR 47 B LYS 48 n 47 LYS 48 B SER 49 n 48 SER 49 B HIS 50 n 49 HIS 50 B GLU 51 n 50 GLU 51 B LYS 52 n 51 LYS 52 B LEU 53 n 52 LEU 53 B ALA 54 n 53 ALA 54 B ALA 55 n 54 ALA 55 B GLU 56 n 55 GLU 56 B LYS 57 n 56 LYS 57 B ASP 58 n 57 ASP 58 B ASP 59 n 58 ASP 59 B LEU 60 n 59 LEU 60 B ILE 61 n 60 ILE 61 B VAL 62 n 61 VAL 62 B SER 63 n 62 SER 63 B ASN 64 n 63 ASN 64 B SER 65 n 64 SER 65 B LYS 66 n 65 LYS 66 B LEU 67 n 66 LEU 67 B PHE 68 n 67 PHE 68 B ARG 69 n 68 ARG 69 B GLN 70 n 69 GLN 70 B ILE 71 n 70 ILE 71 B GLY 72 n 71 GLY 72 B LEU 73 n 72 LEU 73 B THR 74 n 73 THR 74 B n 74 75 B n 75 76 B n 76 77 B n 77 78 B n 78 79 B n 79 80 B n 80 81 B n 81 82 B n 82 83 B n 83 84 B n 84 85 B n 85 86 B n 86 87 B n 87 88 B n 88 89 B n 89 90 B n 90 91 B n 91 92 B n 92 93 B n 93 94 B n 94 95 B n 95 96 B n 96 97 B n 97 98 B PRO 2 n 1 PRO 2 C LEU 3 n 2 LEU 3 C LYS 4 n 3 LYS 4 C PRO 5 n 4 PRO 5 C GLU 6 n 5 GLU 6 C GLU 7 n 6 GLU 7 C HIS 8 n 7 HIS 8 C GLU 9 n 8 GLU 9 C ASP 10 n 9 ASP 10 C ILE 11 n 10 ILE 11 C LEU 12 n 11 LEU 12 C ASN 13 n 12 ASN 13 C LYS 14 n 13 LYS 14 C LEU 15 n 14 LEU 15 C LEU 16 n 15 LEU 16 C ASP 17 n 16 ASP 17 C PRO 18 n 17 PRO 18 C GLU 19 n 18 GLU 19 C LEU 20 n 19 LEU 20 C ALA 21 n 20 ALA 21 C GLN 22 n 21 GLN 22 C SER 23 n 22 SER 23 C GLU 24 n 23 GLU 24 C ARG 25 n 24 ARG 25 C THR 26 n 25 THR 26 C GLU 27 n 26 GLU 27 C ALA 28 n 27 ALA 28 C LEU 29 n 28 LEU 29 C GLN 30 n 29 GLN 30 C GLN 31 n 30 GLN 31 C LEU 32 n 31 LEU 32 C ARG 33 n 32 ARG 33 C VAL 34 n 33 VAL 34 C ASN 35 n 34 ASN 35 C TYR 36 n 35 TYR 36 C GLY 37 n 36 GLY 37 C SER 38 n 37 SER 38 C PHE 39 n 38 PHE 39 C VAL 40 n 39 VAL 40 C SER 41 n 40 SER 41 C GLU 42 n 41 GLU 42 C TYR 43 n 42 TYR 43 C ASN 44 n 43 ASN 44 C ASP 45 n 44 ASP 45 C LEU 46 n 45 LEU 46 C THR 47 n 46 THR 47 C LYS 48 n 47 LYS 48 C SER 49 n 48 SER 49 C HIS 50 n 49 HIS 50 C GLU 51 n 50 GLU 51 C LYS 52 n 51 LYS 52 C LEU 53 n 52 LEU 53 C ALA 54 n 53 ALA 54 C ALA 55 n 54 ALA 55 C GLU 56 n 55 GLU 56 C LYS 57 n 56 LYS 57 C ASP 58 n 57 ASP 58 C ASP 59 n 58 ASP 59 C LEU 60 n 59 LEU 60 C ILE 61 n 60 ILE 61 C VAL 62 n 61 VAL 62 C SER 63 n 62 SER 63 C ASN 64 n 63 ASN 64 C SER 65 n 64 SER 65 C LYS 66 n 65 LYS 66 C LEU 67 n 66 LEU 67 C PHE 68 n 67 PHE 68 C ARG 69 n 68 ARG 69 C GLN 70 n 69 GLN 70 C ILE 71 n 70 ILE 71 C GLY 72 n 71 GLY 72 C LEU 73 n 72 LEU 73 C THR 74 n 73 THR 74 C n 74 75 C n 75 76 C n 76 77 C n 77 78 C n 78 79 C n 79 80 C n 80 81 C n 81 82 C n 82 83 C n 83 84 C n 84 85 C n 85 86 C n 86 87 C n 87 88 C n 88 89 C n 89 90 C n 90 91 C n 91 92 C n 92 93 C n 93 94 C n 94 95 C n 95 96 C n 96 97 C n 97 98 C PRO 2 n 1 PRO 2 D LEU 3 n 2 LEU 3 D LYS 4 n 3 LYS 4 D PRO 5 n 4 PRO 5 D GLU 6 n 5 GLU 6 D GLU 7 n 6 GLU 7 D HIS 8 n 7 HIS 8 D GLU 9 n 8 GLU 9 D ASP 10 n 9 ASP 10 D ILE 11 n 10 ILE 11 D LEU 12 n 11 LEU 12 D ASN 13 n 12 ASN 13 D LYS 14 n 13 LYS 14 D LEU 15 n 14 LEU 15 D LEU 16 n 15 LEU 16 D ASP 17 n 16 ASP 17 D PRO 18 n 17 PRO 18 D GLU 19 n 18 GLU 19 D LEU 20 n 19 LEU 20 D ALA 21 n 20 ALA 21 D GLN 22 n 21 GLN 22 D SER 23 n 22 SER 23 D GLU 24 n 23 GLU 24 D ARG 25 n 24 ARG 25 D THR 26 n 25 THR 26 D GLU 27 n 26 GLU 27 D ALA 28 n 27 ALA 28 D LEU 29 n 28 LEU 29 D GLN 30 n 29 GLN 30 D GLN 31 n 30 GLN 31 D LEU 32 n 31 LEU 32 D ARG 33 n 32 ARG 33 D VAL 34 n 33 VAL 34 D ASN 35 n 34 ASN 35 D TYR 36 n 35 TYR 36 D GLY 37 n 36 GLY 37 D SER 38 n 37 SER 38 D PHE 39 n 38 PHE 39 D VAL 40 n 39 VAL 40 D SER 41 n 40 SER 41 D GLU 42 n 41 GLU 42 D TYR 43 n 42 TYR 43 D ASN 44 n 43 ASN 44 D ASP 45 n 44 ASP 45 D LEU 46 n 45 LEU 46 D THR 47 n 46 THR 47 D LYS 48 n 47 LYS 48 D SER 49 n 48 SER 49 D HIS 50 n 49 HIS 50 D GLU 51 n 50 GLU 51 D LYS 52 n 51 LYS 52 D LEU 53 n 52 LEU 53 D ALA 54 n 53 ALA 54 D ALA 55 n 54 ALA 55 D GLU 56 n 55 GLU 56 D LYS 57 n 56 LYS 57 D ASP 58 n 57 ASP 58 D ASP 59 n 58 ASP 59 D LEU 60 n 59 LEU 60 D ILE 61 n 60 ILE 61 D VAL 62 n 61 VAL 62 D SER 63 n 62 SER 63 D ASN 64 n 63 ASN 64 D SER 65 n 64 SER 65 D LYS 66 n 65 LYS 66 D LEU 67 n 66 LEU 67 D PHE 68 n 67 PHE 68 D ARG 69 n 68 ARG 69 D GLN 70 n 69 GLN 70 D ILE 71 n 70 ILE 71 D GLY 72 n 71 GLY 72 D LEU 73 n 72 LEU 73 D THR 74 n 73 THR 74 D n 74 75 D n 75 76 D n 76 77 D n 77 78 D n 78 79 D n 79 80 D n 80 81 D n 81 82 D n 82 83 D n 83 84 D n 84 85 D n 85 86 D n 86 87 D n 87 88 D n 88 89 D n 89 90 D n 90 91 D n 91 92 D n 92 93 D n 93 94 D n 94 95 D n 95 96 D n 96 97 D n 97 98 D author_and_software_defined_assembly PISA 2 dimeric author_and_software_defined_assembly PISA 2 dimeric software_defined_assembly PISA 4 tetrameric 3720 -28 9510 3720 -27 9350 8980 -65 17330 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A GLU 75 A GLU 74 1 Y 1 A LYS 76 A LYS 75 1 Y 1 A GLN 77 A GLN 76 1 Y 1 A GLU 78 A GLU 77 1 Y 1 A GLU 79 A GLU 78 1 Y 1 A ASP 80 A ASP 79 1 Y 1 A HIS 81 A HIS 80 1 Y 1 A LYS 82 A LYS 81 1 Y 1 A LYS 83 A LYS 82 1 Y 1 A ALA 84 A ALA 83 1 Y 1 A ASP 85 A ASP 84 1 Y 1 A ILE 86 A ILE 85 1 Y 1 A SER 87 A SER 86 1 Y 1 A GLU 88 A GLU 87 1 Y 1 A THR 89 A THR 88 1 Y 1 A ILE 90 A ILE 89 1 Y 1 A THR 91 A THR 90 1 Y 1 A ILE 92 A ILE 91 1 Y 1 A GLU 93 A GLU 92 1 Y 1 A ASP 94 A ASP 93 1 Y 1 A LEU 95 A LEU 94 1 Y 1 A GLU 96 A GLU 95 1 Y 1 A ALA 97 A ALA 96 1 Y 1 A LYS 98 A LYS 97 1 Y 1 B GLU 75 B GLU 74 1 Y 1 B LYS 76 B LYS 75 1 Y 1 B GLN 77 B GLN 76 1 Y 1 B GLU 78 B GLU 77 1 Y 1 B GLU 79 B GLU 78 1 Y 1 B ASP 80 B ASP 79 1 Y 1 B HIS 81 B HIS 80 1 Y 1 B LYS 82 B LYS 81 1 Y 1 B LYS 83 B LYS 82 1 Y 1 B ALA 84 B ALA 83 1 Y 1 B ASP 85 B ASP 84 1 Y 1 B ILE 86 B ILE 85 1 Y 1 B SER 87 B SER 86 1 Y 1 B GLU 88 B GLU 87 1 Y 1 B THR 89 B THR 88 1 Y 1 B ILE 90 B ILE 89 1 Y 1 B THR 91 B THR 90 1 Y 1 B ILE 92 B ILE 91 1 Y 1 B GLU 93 B GLU 92 1 Y 1 B ASP 94 B ASP 93 1 Y 1 B LEU 95 B LEU 94 1 Y 1 B GLU 96 B GLU 95 1 Y 1 B ALA 97 B ALA 96 1 Y 1 B LYS 98 B LYS 97 1 Y 1 C GLU 75 C GLU 74 1 Y 1 C LYS 76 C LYS 75 1 Y 1 C GLN 77 C GLN 76 1 Y 1 C GLU 78 C GLU 77 1 Y 1 C GLU 79 C GLU 78 1 Y 1 C ASP 80 C ASP 79 1 Y 1 C HIS 81 C HIS 80 1 Y 1 C LYS 82 C LYS 81 1 Y 1 C LYS 83 C LYS 82 1 Y 1 C ALA 84 C ALA 83 1 Y 1 C ASP 85 C ASP 84 1 Y 1 C ILE 86 C ILE 85 1 Y 1 C SER 87 C SER 86 1 Y 1 C GLU 88 C GLU 87 1 Y 1 C THR 89 C THR 88 1 Y 1 C ILE 90 C ILE 89 1 Y 1 C THR 91 C THR 90 1 Y 1 C ILE 92 C ILE 91 1 Y 1 C GLU 93 C GLU 92 1 Y 1 C ASP 94 C ASP 93 1 Y 1 C LEU 95 C LEU 94 1 Y 1 C GLU 96 C GLU 95 1 Y 1 C ALA 97 C ALA 96 1 Y 1 C LYS 98 C LYS 97 1 Y 1 D GLU 75 D GLU 74 1 Y 1 D LYS 76 D LYS 75 1 Y 1 D GLN 77 D GLN 76 1 Y 1 D GLU 78 D GLU 77 1 Y 1 D GLU 79 D GLU 78 1 Y 1 D ASP 80 D ASP 79 1 Y 1 D HIS 81 D HIS 80 1 Y 1 D LYS 82 D LYS 81 1 Y 1 D LYS 83 D LYS 82 1 Y 1 D ALA 84 D ALA 83 1 Y 1 D ASP 85 D ASP 84 1 Y 1 D ILE 86 D ILE 85 1 Y 1 D SER 87 D SER 86 1 Y 1 D GLU 88 D GLU 87 1 Y 1 D THR 89 D THR 88 1 Y 1 D ILE 90 D ILE 89 1 Y 1 D THR 91 D THR 90 1 Y 1 D ILE 92 D ILE 91 1 Y 1 D GLU 93 D GLU 92 1 Y 1 D ASP 94 D ASP 93 1 Y 1 D LEU 95 D LEU 94 1 Y 1 D GLU 96 D GLU 95 1 Y 1 D ALA 97 D ALA 96 1 Y 1 D LYS 98 D LYS 97 1 Y 1 A ALA 21 -46.21 161.67 1 B LEU 20 -27.06 136.87 1 B SER 38 -49.87 -77.28 1 B PHE 39 -27.07 -60.58 1 B PHE 68 -54.30 -70.52 PROTEIN_REP.PARAM PROTEIN.TOP 54.0 -3.63 0.00 0.00 -11.24 0.00 14.87 0.29 0.006 0.254 0.258 0.254 2.80 36.15 2582 27757 27757 9.3 82.1 RANDOM 1 RESTRAINED THROUGHOUT 0.0 MOLECULAR REPLACEMENT PDB ENTRY 1NO4 FLAT MODEL 38.9522 0.344448 0.51 0.46 5.0 0.81 0.84 2.80 36.15 0 2356 0 0 2356 0.008 1.2 18.1 0.69 0.397 0.021 0.402 2.98 368 3276 6 10.1 65.0 33.1 2.80 36.15 1NOH 27757 27757 0.0 0.0 0.091 1 11.5 14.4 98.2 2.80 2.90 2.4 1568 0.473 95.9 data reduction DENZO data scaling SCALEPACK phasing AMoRE refinement CNS 1.1 The structure of bacteriophage phi29 scaffolding protein gp7 after prohead assembly 1 N N 1 N N 1 N N 1 N N The biological unit is a dimeric coiled-coil. There are two such dimers per asymmetric unit. A LYS 4 A LYS 3 HELX_P A LEU 15 A LEU 14 1 1 12 A ALA 21 A ALA 20 HELX_P A THR 74 A THR 73 1 2 54 B LYS 4 B LYS 3 HELX_P B LEU 15 B LEU 14 1 3 12 B ALA 21 B ALA 20 HELX_P B THR 74 B THR 73 1 4 54 C LYS 4 C LYS 3 HELX_P C ASP 17 C ASP 16 1 5 14 C ALA 21 C ALA 20 HELX_P C THR 74 C THR 73 1 6 54 D LYS 4 D LYS 3 HELX_P D LEU 16 D LEU 15 1 7 13 D ALA 21 D ALA 20 HELX_P D THR 74 D THR 73 1 8 54 VIRAL PROTEIN coiled-coil, Viral protein VG7_BPPH2 UNP 1 1 P13848 PLKPEEHEDILNKLLDPELAQSERTEALQQLRVNYGSFVSEYNDLTKSHEKLAAEKDDLIVSNSKLFRQIGLTDKQEEDH KKADISETITIEDLEAK 1 97 1NOH 2 98 P13848 A 1 1 97 1 97 1NOH 2 98 P13848 B 1 1 97 1 97 1NOH 2 98 P13848 C 1 1 97 1 97 1NOH 2 98 P13848 D 1 1 97 1 ASP conflict GLU 75 1NOH A P13848 UNP 74 74 2 ASP conflict GLU 75 1NOH B P13848 UNP 74 74 3 ASP conflict GLU 75 1NOH C P13848 UNP 74 74 4 ASP conflict GLU 75 1NOH D P13848 UNP 74 74 20 orthorhombic C 2 2 21